INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-14 ACC RF00752 DESC microRNA mir-14 STATES 193 NODES 41 CLEN 63 W 105 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 09:07:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00752/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 23 EFFN 3.478638 CKSUM 540333525 NULL 0.000 0.000 0.000 0.000 GA 53.00 TC 53.00 NC 52.50 EFP7GF -12.2068 0.71925 ECMLC 0.66572 -5.03423 3.28633 1600000 305355 0.003930 ECMGC 0.45537 -16.12857 -3.55231 1600000 122803 0.003257 ECMLI 0.64104 -4.37122 4.10493 1600000 274763 0.004367 ECMGI 0.49592 -11.45903 -0.44753 1600000 94118 0.004250 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 105 158 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 IL 1 1 2 1 6 1 8 107 159 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 8 106 159 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 73 u a - - MP 3 2 3 7 6 2 14 105 158 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -1.678 -1.190 -1.871 1.338 -1.839 -2.719 1.394 -1.506 -1.936 0.972 -2.505 -0.497 1.953 -1.382 -0.063 -0.482 ML 4 2 3 7 6 1 6 103 156 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 6 103 155 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 2 99 152 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 8 105 157 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 8 104 157 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 72 G U - - MP 9 8 6 13 6 2 13 103 156 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -4.148 -2.809 -4.359 1.578 -5.770 -6.316 -1.269 -4.391 -3.936 0.652 -4.502 3.317 -1.452 -5.260 -3.183 -2.990 ML 10 8 6 13 6 1 5 101 154 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 5 101 153 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 2 97 150 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 7 103 155 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 7 102 155 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 71 U A - - MP 15 14 6 19 6 2 13 101 154 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -4.586 -4.616 -4.450 -0.945 -0.970 -4.994 0.928 -4.099 -4.466 -0.812 -4.850 -2.705 3.514 -4.726 -1.061 -3.268 ML 16 14 6 19 6 1 5 99 152 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 5 99 151 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 1 95 148 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 7 101 153 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 7 100 153 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 70 g u - - MP 21 20 6 25 6 2 12 99 152 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -3.459 -2.198 -3.845 1.226 -4.339 -4.465 -0.178 0.997 -3.336 0.804 -3.672 2.852 -0.529 -4.108 -2.045 -2.567 ML 22 20 6 25 6 1 5 97 150 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 5 97 150 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 1 94 146 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 6 99 151 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 6 98 151 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 69 G C - - MP 27 26 6 31 6 2 11 97 150 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -5.694 -3.561 -5.952 -0.472 -6.552 -5.047 -1.681 -6.213 -4.895 3.802 -5.176 -1.313 -2.047 -5.076 -3.781 -4.816 ML 28 26 6 31 6 1 4 96 148 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 4 95 148 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 1 92 144 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 6 97 149 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 6 97 149 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 68 G C - - MP 33 32 6 37 6 2 9 95 148 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -5.694 -3.561 -5.952 -0.472 -6.552 -5.047 -1.681 -6.213 -4.895 3.802 -5.176 -1.313 -2.047 -5.076 -3.781 -4.816 ML 34 32 6 37 6 1 4 94 146 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 4 93 146 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 1 90 143 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 5 95 147 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 5 95 147 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 7 67 a u - - MP 39 38 6 43 6 2 8 93 146 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -2.536 -2.243 -2.698 2.359 -2.790 -3.544 0.834 -1.389 -2.726 1.406 -3.243 1.133 0.619 -2.843 -0.817 -0.751 ML 40 38 6 43 6 1 4 92 144 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 3 92 144 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 89 142 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 4 93 145 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 4 93 145 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 8 66 G C - - MP 45 44 6 49 4 2 6 91 144 -7.474 -7.681 -0.037 -6.095 -5.694 -3.561 -5.952 -0.472 -6.552 -5.047 -1.681 -6.213 -4.895 3.802 -5.176 -1.313 -2.047 -5.076 -3.781 -4.816 ML 46 44 6 49 4 1 3 91 143 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 4 1 1 90 142 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 48 44 6 49 4 0 0 89 141 -4.568 -4.250 -2.265 -0.520 IL 49 49 5 49 4 1 4 92 144 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 50 50 6 50 3 1 4 91 143 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - c - - - ML 51 50 6 53 3 1 4 89 142 -8.821 -0.013 -7.139 -0.060 0.508 -0.780 0.051 D 52 50 6 53 3 0 0 88 140 -5.620 -0.734 -1.403 IL 53 53 3 53 3 1 3 90 142 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 65 - U - - MR 54 53 3 56 5 1 4 88 141 -7.533 -0.029 -7.349 -7.561 -8.453 -2.427 -2.266 -3.194 1.806 D 55 53 3 56 5 0 0 87 139 -5.352 -0.707 -2.978 -4.409 -2.404 IR 56 56 3 56 5 1 2 89 141 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 10 64 G C - - MP 57 56 3 61 6 2 5 87 140 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -5.694 -3.561 -5.952 -0.472 -6.552 -5.047 -1.681 -6.213 -4.895 3.802 -5.176 -1.313 -2.047 -5.076 -3.781 -4.816 ML 58 56 3 61 6 1 1 86 138 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 3 61 6 1 1 85 138 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 3 61 6 0 0 82 134 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 87 139 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 2 87 139 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 11 63 A U - - MP 63 62 6 67 6 2 5 85 138 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -5.018 -4.319 -4.664 3.766 -5.257 -6.301 -1.195 -1.876 -5.021 -0.615 -5.568 -1.887 -1.578 -5.538 -3.052 -3.802 ML 64 62 6 67 6 1 1 84 136 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 83 136 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 80 133 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 85 137 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 85 137 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 12 62 G C - - MP 69 68 6 73 6 2 4 83 136 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -5.694 -3.561 -5.952 -0.472 -6.552 -5.047 -1.681 -6.213 -4.895 3.802 -5.176 -1.313 -2.047 -5.076 -3.781 -4.816 ML 70 68 6 73 6 1 1 82 134 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 82 134 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 79 132 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 83 135 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 83 135 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 13 61 A U - - MP 75 74 6 79 4 2 2 81 134 -4.611 -7.681 -0.090 -6.095 -4.327 -3.159 -4.375 3.559 -5.538 -6.394 -1.180 -4.463 -4.188 0.531 -4.797 0.379 -1.373 -5.240 -3.076 -3.145 ML 76 74 6 79 4 1 1 81 133 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 4 1 1 80 132 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 78 74 6 79 4 0 0 79 131 -4.568 -4.250 -2.265 -0.520 IL 79 79 5 79 4 1 1 81 134 -1.976 -2.659 -0.839 -5.144 0.000 0.000 0.000 0.000 IR 80 80 6 80 3 1 1 81 133 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - a - - - ML 81 80 6 83 3 1 1 79 132 -8.821 -0.013 -7.139 0.537 0.210 -1.282 -0.028 D 82 80 6 83 3 0 0 78 130 -5.620 -0.734 -1.403 IL 83 83 3 83 3 1 1 80 132 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 60 - U - - MR 84 83 3 86 5 1 1 78 131 -7.533 -0.029 -7.349 -7.561 -8.453 -2.427 -2.266 -3.194 1.806 D 85 83 3 86 5 0 0 77 129 -5.352 -0.707 -2.978 -4.409 -2.404 IR 86 86 3 86 5 1 1 78 131 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 16 59 a u - - MP 87 86 3 91 6 2 2 77 130 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -3.271 -2.512 -3.435 2.248 -3.834 -4.480 0.060 -3.661 -3.329 1.202 -3.843 1.988 -0.161 -3.726 -1.693 0.947 ML 88 86 3 91 6 1 1 75 128 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 3 91 6 1 1 75 127 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 3 91 6 0 0 71 124 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 77 129 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 76 129 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 17 58 a u - - MP 93 92 6 97 6 2 2 75 128 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -2.238 -1.870 -2.487 1.486 -2.524 -3.173 0.974 0.513 -2.400 1.142 -2.856 1.407 0.754 -2.592 -0.620 0.227 ML 94 92 6 97 6 1 1 73 126 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 73 126 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 69 122 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 75 127 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 75 127 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 18 57 g u - - MP 99 98 6 103 6 2 2 73 126 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -2.367 -1.774 -2.659 1.541 -2.728 -3.219 0.874 -1.327 -2.485 1.224 -2.878 1.755 0.622 -2.723 -0.768 0.722 ML 100 98 6 103 6 1 1 71 124 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 71 124 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 68 120 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 73 125 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 73 125 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 19 56 G C - - MP 105 104 6 109 6 2 2 71 124 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -5.694 -3.561 -5.952 -0.472 -6.552 -5.047 -1.681 -6.213 -4.895 3.802 -5.176 -1.313 -2.047 -5.076 -3.781 -4.816 ML 106 104 6 109 6 1 1 70 122 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 69 122 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 66 118 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 71 123 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 71 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 20 55 a u - - MP 111 110 6 115 6 2 2 69 122 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -3.998 -2.844 -4.132 2.998 -5.196 -5.913 -0.863 -4.271 -3.884 0.911 -4.478 2.107 -1.043 -4.823 -2.744 -2.872 ML 112 110 6 115 6 1 1 68 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 67 120 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 64 117 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 69 121 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 69 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 21 54 C G - - MP 117 116 6 121 6 2 2 67 120 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -5.652 -5.650 -5.143 -1.821 -3.664 -5.408 3.786 -4.586 -5.253 -1.695 -5.371 -3.638 -0.291 -5.644 -1.421 -4.064 ML 118 116 6 121 6 1 1 66 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 65 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 63 115 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 67 119 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 67 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 22 53 U A - - MP 123 122 6 127 4 2 2 65 118 -2.181 -7.681 -0.396 -6.095 -4.868 -4.799 -4.862 -1.225 -4.078 -5.562 0.150 -4.689 -2.399 -1.089 -5.321 -2.830 3.701 -5.091 -1.773 -3.571 ML 124 122 6 127 4 1 1 64 117 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 4 1 1 64 116 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 126 122 6 127 4 0 0 62 115 -4.568 -4.250 -2.265 -0.520 IL 127 127 5 127 4 1 1 65 117 -2.272 -3.735 -0.505 -6.220 0.000 0.000 0.000 0.000 IR 128 128 6 128 3 1 1 65 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - c - - - ML 129 128 6 131 3 1 1 63 115 -8.821 -0.013 -7.139 -0.532 0.367 -0.361 0.310 D 130 128 6 131 3 0 0 62 114 -5.620 -0.734 -1.403 IL 131 131 3 131 3 1 1 63 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 52 - C - - MR 132 131 3 134 5 1 1 62 114 -7.533 -0.029 -7.349 -7.561 -8.453 -2.935 1.834 -3.745 -2.126 D 133 131 3 134 5 0 0 60 113 -5.352 -0.707 -2.978 -4.409 -2.404 IR 134 134 3 134 5 1 1 62 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 26 51 a u - - MP 135 134 3 139 6 2 2 61 113 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -4.017 -2.837 -4.159 2.785 -5.270 -5.959 -0.915 -4.289 -3.892 0.890 -4.482 2.454 -1.092 -4.871 -2.800 -2.886 ML 136 134 3 139 6 1 1 59 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 3 139 6 1 1 59 111 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 3 139 6 0 0 55 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 60 113 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 60 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 27 50 C G - - MP 141 140 6 145 6 2 2 59 111 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -5.039 -5.125 -3.350 -1.822 -4.424 -5.648 3.836 -5.230 -5.190 -1.738 -3.486 -3.450 -1.202 -5.324 -2.619 -4.250 ML 142 140 6 145 6 1 1 57 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 57 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 53 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 58 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 58 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 28 49 U A - - MP 147 146 6 151 6 2 2 57 109 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -4.137 -4.180 -4.024 -0.549 0.019 -4.586 1.284 -3.708 -4.047 -0.428 -4.438 -2.302 3.282 -4.296 -0.707 -2.931 ML 148 146 6 151 6 1 1 55 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 55 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 52 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 56 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 56 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 29 48 g u - - MP 153 152 6 157 6 2 2 55 107 -9.331 -9.271 -0.018 -8.047 -8.327 -8.722 -1.607 0.256 -2.727 0.726 -2.726 -1.742 1.147 -2.260 -0.890 0.724 -1.365 1.995 0.495 -0.836 -0.612 -0.711 ML 154 152 6 157 6 1 1 54 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 53 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 51 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 54 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 54 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 30 47 u a - - MP 159 158 6 163 4 2 2 53 105 -7.474 -7.681 -0.037 -6.095 -1.650 -1.854 -1.845 1.057 -1.157 -2.696 1.409 -2.177 -1.357 0.898 -1.167 -0.514 1.895 -1.986 0.210 0.054 ML 160 158 6 163 4 1 1 52 105 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 4 1 1 51 104 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 162 158 6 163 4 0 0 50 102 -4.568 -4.250 -2.265 -0.520 IL 163 163 5 163 4 1 1 53 106 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 164 164 6 164 3 1 1 53 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - g - - - ML 165 164 6 167 3 1 1 51 103 -8.458 -0.015 -7.113 -0.675 -1.299 0.656 0.477 D 166 164 6 167 3 0 0 49 101 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 52 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - u - - - ML 168 167 3 170 3 1 1 50 102 -8.458 -0.015 -7.113 -0.452 0.504 -1.552 0.594 D 169 167 3 170 3 0 0 47 100 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 51 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - u - - - ML 171 170 3 173 3 1 1 49 101 -8.458 -0.183 -3.102 0.110 -0.768 -1.369 0.961 D 172 170 3 173 3 0 0 46 98 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 50 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - U - - - ML 174 173 3 176 3 1 1 48 101 -8.292 -0.098 -4.006 -0.797 -0.433 -1.189 1.167 D 175 173 3 176 3 0 0 42 95 -7.451 -2.964 -0.207 IL 176 176 3 176 3 1 1 49 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - u - - - ML 177 176 3 179 3 1 1 48 100 -1.839 -0.490 -6.865 0.237 -0.636 -0.832 0.692 D 178 176 3 179 3 0 0 35 87 -7.784 -3.297 -0.162 IL 179 179 3 179 3 1 1 50 103 -0.508 -1.813 -6.373 0.000 0.000 0.000 0.000 [ MATL 36 ] 43 - u - - - ML 180 179 3 182 3 1 1 16 34 -8.211 -0.017 -6.865 -0.169 -0.923 -0.531 0.920 D 181 179 3 182 3 0 0 15 34 -7.784 -0.672 -1.444 IL 182 182 3 182 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 44 - u - - - ML 183 182 3 185 3 1 1 14 33 -8.408 -0.015 -7.062 0.056 -0.275 -0.866 0.665 D 184 182 3 185 3 0 0 14 33 -6.706 -0.934 -1.098 IL 185 185 3 185 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 45 - a - - - ML 186 185 3 188 3 1 1 13 31 -8.458 -0.015 -7.113 0.789 -0.473 -0.569 -0.189 D 187 185 3 188 3 0 0 13 32 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 46 - a - - - ML 189 188 3 191 2 1 1 1 1 * 0.000 0.547 -0.638 -0.330 0.139 D 190 188 3 191 2 0 0 0 0 * 0.000 IL 191 191 3 191 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 40 ] - - - - - - E 192 191 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-14 ACC RF00752 DESC microRNA mir-14 LENG 63 MAXL 146 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 09:07:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00752/CM NSEQ 23 EFFN 5.056519 CKSUM 540333525 STATS LOCAL MSV -7.6234 0.71925 STATS LOCAL VITERBI -8.7091 0.71925 STATS LOCAL FORWARD -3.7798 0.71925 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.61806 1.46631 1.36789 1.15107 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 0.00000 * 1 1.49435 1.59706 1.71856 0.93194 1 u - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 2 1.67889 3.95213 0.26408 3.63847 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 3 3.69349 2.05701 3.52482 0.20111 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 4 1.90374 1.67666 0.46705 3.29301 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 5 3.23185 4.16376 0.07401 4.11619 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 6 3.22967 4.16031 0.07425 4.11151 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 7 0.87178 2.12995 1.14079 1.94221 7 a - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 8 3.22684 4.15586 0.07455 4.10548 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 9 1.46733 0.96211 1.96612 1.39685 9 c - - - 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 10 3.23603 4.17036 0.07357 4.12516 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 11 0.07801 3.58364 3.44712 4.17112 11 A - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 12 3.23149 4.16319 0.07405 4.11542 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 13 0.20538 3.97736 1.95336 3.68372 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.06490 3.00121 4.33430 0.46342 0.99190 1.09861 0.40547 14 0.98484 1.18401 2.42773 1.46009 15 a - - - 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 15 1.04087 3.23241 0.89345 1.61873 16 g - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 16 1.51998 1.47207 1.05077 1.59867 17 g - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 17 1.47950 2.15112 0.87647 1.42860 18 g - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 18 3.22979 4.16050 0.07423 4.11176 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 19 0.57429 3.77657 0.95960 3.47545 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 20 4.22557 0.08571 4.11537 2.97193 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 21 4.04668 3.14789 3.51677 0.09444 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.28643 1.44412 4.33430 0.24088 1.54148 1.09861 0.40547 22 1.89962 1.05953 1.62094 1.18403 25 c - - - 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 23 0.73402 3.80788 0.75988 3.50287 26 a - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 24 4.01928 0.06397 3.94984 3.69928 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 25 3.36276 1.56974 3.19392 0.33373 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 26 1.56923 1.79646 0.74923 1.87615 29 g - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 27 1.74764 1.57777 1.56862 0.88904 30 u - - < 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 28 2.05628 2.50081 0.83949 1.02688 31 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 29 1.79826 0.96094 2.66155 0.96223 32 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 30 1.31324 2.01335 2.48779 0.66472 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.15738 4.33430 2.02110 1.46634 0.26236 1.09861 0.40547 31 2.13550 1.72660 2.31493 0.50227 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.09389 4.20715 2.59386 1.46634 0.26236 2.49375 0.08621 32 1.21131 1.88853 2.00859 0.87534 35 u - - _ 1.38629 1.38629 1.38629 1.38629 0.41370 1.13021 4.14544 1.57681 0.23147 2.78043 0.06402 33 1.55517 2.15397 1.76497 0.68989 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03219 4.14544 4.14544 1.46634 0.26236 0.35821 1.20041 34 1.35540 1.58308 2.02840 0.90321 44 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02762 4.29614 4.29614 1.46634 0.26236 0.41792 1.07415 35 0.79813 1.72011 1.80971 1.57463 45 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 36 0.98306 1.86814 1.61570 1.29948 46 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 37 1.12440 1.90544 1.29021 1.38158 47 a - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 38 2.14194 1.44702 1.65511 0.78475 48 u - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 39 0.26703 3.35760 1.85927 3.12939 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 40 3.89604 4.38920 0.04920 4.18172 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 41 3.70847 2.47719 3.58913 0.14632 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 42 3.95554 0.06881 4.46267 3.32927 52 C - - - 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 43 0.09462 4.09641 2.97066 3.79950 53 A - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 44 3.25108 4.27490 0.07333 4.01425 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 45 3.66132 2.46142 3.54932 0.15054 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 46 4.25324 0.09035 4.02685 2.91246 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 47 2.47146 2.00721 2.20961 0.39834 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 48 2.39221 2.05096 2.15071 0.41014 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 49 3.22481 2.25543 3.02619 0.21455 59 U - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 50 3.53735 3.35727 4.07889 0.08430 60 U - - - 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 51 3.87149 2.71003 3.75642 0.11735 61 U - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 52 4.26316 0.08999 4.03200 2.91424 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 53 4.42193 3.80047 4.09688 0.05234 63 U - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 54 4.29960 0.08870 4.05070 2.92066 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 55 3.53735 3.35727 4.07889 0.08430 65 U - - - 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 56 4.23867 0.09089 4.01925 2.90982 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 57 2.39790 1.89568 2.16086 0.44060 67 U - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 58 4.24938 0.09049 4.02484 2.91176 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 59 4.25763 0.09019 4.02913 2.91325 69 C - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 60 3.48478 2.47822 3.25517 0.16620 70 U - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 61 0.18554 3.68883 2.18376 3.45052 71 A - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 62 3.82843 2.58189 3.71925 0.12968 72 U - - > 1.38629 1.38629 1.38629 1.38629 0.02657 4.33430 4.33430 1.46634 0.26236 1.09861 0.40547 63 1.15831 1.73297 1.44411 1.29730 73 a - - > 1.38629 1.38629 1.38629 1.38629 0.01337 4.32110 * 1.46634 0.26236 0.00000 * //