INFERNAL1/a [1.1.4 | Dec 2020] NAME mir-155 ACC RF00731 DESC microRNA mir-155 STATES 199 NODES 49 CLEN 65 W 84 ALPH RNA RF no CONS yes MAP yes DATE Sun Oct 31 22:56:36 2021 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 /hps/nobackup/production/xfam/rfam/RELEASES/14.7/updates/GO_terms/RF00731/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 25 EFFN 2.694702 CKSUM 2666455095 NULL 0.000 0.000 0.000 0.000 GA 56.00 TC 56.60 NC 55.80 EFP7GF -10.2621 0.71921 ECMLC 0.66752 -3.52732 4.41270 1600000 240427 0.004991 ECMGC 0.42888 -14.80978 -1.68923 1600000 111144 0.003599 ECMLI 0.64253 -2.52697 5.18343 1600000 170122 0.007054 ECMGI 0.46221 -10.05949 1.24532 1600000 74363 0.005379 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 84 106 -7.232 -7.439 -0.462 -1.936 IL 1 1 2 1 4 1 15 87 109 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 15 86 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 1 15 84 106 -7.853 -0.022 -6.507 -0.309 0.376 -0.550 0.278 D 4 2 3 5 3 0 9 82 104 -8.002 -1.505 -0.635 IL 5 5 3 5 3 1 14 85 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 14 83 105 -8.004 -0.020 -6.658 -0.510 -0.568 -0.734 1.016 D 7 5 3 8 3 0 9 80 103 -7.559 -3.072 -0.191 IL 8 8 3 8 3 1 13 84 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - g - - - ML 9 8 3 11 3 1 13 82 104 -8.391 -0.112 -3.801 -0.200 -1.248 0.929 -0.314 D 10 8 3 11 3 0 8 80 102 -6.606 -1.720 -0.544 IL 11 11 3 11 3 1 13 82 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 70 - g - - MR 12 11 3 14 3 1 13 81 103 -8.299 -0.019 -6.617 0.071 -0.684 0.418 -0.014 D 13 11 3 14 3 0 8 79 101 -7.920 -0.956 -1.057 IR 14 14 3 14 3 1 12 81 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 69 - A - - MR 15 14 3 17 3 1 13 80 102 -8.492 -0.017 -6.810 1.244 -0.624 -1.321 -0.778 D 16 14 3 17 3 0 6 78 100 -7.187 -0.693 -1.416 IR 17 17 3 17 3 1 10 80 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 68 - c - - MR 18 17 3 20 5 1 12 79 101 -7.327 -0.033 -7.143 -7.355 -8.247 -0.851 1.000 -1.477 0.120 D 19 17 3 20 5 0 4 77 99 -5.352 -0.707 -2.978 -4.409 -2.404 IR 20 20 3 20 5 1 9 79 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 4 67 u a - - MP 21 20 3 25 6 2 13 78 100 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -3.096 -3.110 -3.156 0.410 -2.513 -3.906 1.679 -3.086 -3.170 0.575 -3.666 -1.256 2.588 -3.341 1.064 -1.111 ML 22 20 3 25 6 1 6 76 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 3 25 6 1 6 76 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 3 25 6 0 2 73 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 8 77 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 8 77 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 5 66 U A - - MP 27 26 6 31 6 2 13 76 98 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -4.853 -4.689 -4.615 -0.943 -3.426 -5.116 0.911 -4.164 -4.614 -0.771 -4.954 -2.567 3.570 -4.974 -1.087 -3.360 ML 28 26 6 31 6 1 6 74 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 6 74 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 1 71 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 7 75 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 8 75 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 65 A U - - MP 33 32 6 37 6 2 12 74 96 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -4.292 -3.205 -4.262 3.579 -4.867 -5.988 -0.532 -4.270 -4.146 0.536 -4.718 -0.609 -0.946 -5.083 -2.470 -3.075 ML 34 32 6 37 6 1 5 72 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 5 72 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 1 69 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 7 73 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 7 73 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 64 A U - - MP 39 38 6 43 6 2 12 72 94 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -4.292 -3.205 -4.262 3.579 -4.867 -5.988 -0.532 -4.270 -4.146 0.536 -4.718 -0.609 -0.946 -5.083 -2.470 -3.075 ML 40 38 6 43 6 1 5 70 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 5 70 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 1 67 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 7 71 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 7 71 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 63 U A - - MP 45 44 6 49 6 2 11 70 92 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -4.853 -4.689 -4.615 -0.943 -3.426 -5.116 0.911 -4.164 -4.614 -0.771 -4.954 -2.567 3.570 -4.974 -1.087 -3.360 ML 46 44 6 49 6 1 5 68 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 5 68 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 1 65 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 6 69 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 6 69 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 62 G C - - MP 51 50 6 55 6 2 11 68 90 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -5.261 -3.346 -5.428 -0.158 -5.960 -4.890 -1.195 -5.694 -4.650 3.741 -4.953 -1.070 -1.567 -4.803 -3.263 -4.297 ML 52 50 6 55 6 1 4 66 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 4 66 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 63 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 6 67 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 6 67 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 10 61 C G - - MP 57 56 6 61 6 2 10 66 88 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -5.137 -5.093 -4.724 -1.281 -3.326 -5.058 3.698 -4.194 -4.799 -1.111 -4.990 -3.053 0.121 -5.165 -1.053 -3.621 ML 58 56 6 61 6 1 4 64 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 4 64 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 61 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 5 65 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 6 65 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 11 60 U A - - MP 63 62 6 67 6 2 9 64 86 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -4.853 -4.689 -4.615 -0.943 -3.426 -5.116 0.911 -4.164 -4.614 -0.771 -4.954 -2.567 3.570 -4.974 -1.087 -3.360 ML 64 62 6 67 6 1 4 62 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 4 62 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 60 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 5 63 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 5 63 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 59 A U - - MP 69 68 6 73 6 2 8 62 84 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -0.237 -2.620 -3.220 3.082 -3.430 -4.294 0.381 -3.445 -3.223 1.111 -3.774 -0.404 0.124 -3.520 -1.356 -2.255 ML 70 68 6 73 6 1 3 60 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 3 60 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 58 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 5 61 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 5 61 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 58 A U - - MP 75 74 6 79 6 2 7 60 82 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -4.292 -3.205 -4.262 3.579 -4.867 -5.988 -0.532 -4.270 -4.146 0.536 -4.718 -0.609 -0.946 -5.083 -2.470 -3.075 ML 76 74 6 79 6 1 3 59 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 2 58 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 57 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 4 59 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 4 59 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 57 U G - - MP 81 80 6 85 4 2 5 58 80 -7.232 -7.439 -0.044 -5.853 -4.411 -4.438 -4.071 -0.741 -2.747 -4.446 1.549 -3.556 -4.124 -0.581 -4.394 -2.530 1.279 -4.453 3.087 -2.980 ML 82 80 6 85 4 1 2 58 80 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 4 1 1 57 79 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 84 80 6 85 4 0 0 56 78 -4.568 -4.250 -2.265 -0.520 IL 85 85 5 85 4 1 3 59 81 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 86 86 6 86 3 1 3 58 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 15 - C - - - ML 87 86 6 89 3 1 4 56 78 -8.230 -0.017 -6.884 -1.603 1.490 -2.455 -0.559 D 88 86 6 89 3 0 0 54 76 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 2 57 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 16 - G - - - ML 90 89 3 92 3 1 4 55 77 -8.230 -0.017 -6.884 -2.136 -3.434 1.823 -2.820 D 91 89 3 92 3 0 0 53 75 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 2 56 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 17 - U - - - ML 93 92 3 95 3 1 3 53 76 -8.230 -0.017 -6.884 -1.989 -1.899 -2.743 1.736 D 94 92 3 95 3 0 0 52 74 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 2 55 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 18 - G - - - ML 96 95 3 98 3 1 3 52 75 -8.230 -0.017 -6.884 -2.136 -3.434 1.823 -2.820 D 97 95 3 98 3 0 0 51 73 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 54 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 19 - A - - - ML 99 98 3 101 3 1 2 51 73 -8.604 -0.016 -6.922 1.813 -2.910 -2.489 -2.507 D 100 98 3 101 3 0 0 50 72 -5.620 -0.734 -1.403 IL 101 101 3 101 3 1 1 52 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 56 - U - - MR 102 101 3 104 3 1 2 50 72 -8.604 -0.016 -6.922 -1.297 -0.758 -2.043 1.464 D 103 101 3 104 3 0 0 49 71 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 51 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 55 - A - - MR 105 104 3 107 3 1 1 49 71 -8.604 -0.016 -6.922 1.065 -0.197 -1.314 -0.659 D 106 104 3 107 3 0 0 48 70 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 50 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 54 - C - - MR 108 107 3 110 5 1 1 48 70 -2.578 -0.293 -7.143 -7.355 -8.247 -0.987 1.225 -0.925 -0.664 D 109 107 3 110 5 0 0 47 69 -5.352 -0.707 -2.978 -4.409 -2.404 IR 110 110 3 110 5 1 1 48 70 -3.024 -0.304 -6.535 -4.703 -5.808 0.000 0.000 0.000 0.000 [ MATP 26 ] 20 52 U A - - MP 111 110 3 115 6 2 2 47 69 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -4.378 -4.342 -4.209 -0.612 -3.083 -4.735 1.253 -3.820 -4.225 -0.406 -4.592 -2.350 3.373 -4.497 0.017 -3.034 ML 112 110 3 115 6 1 1 46 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 3 115 6 1 1 45 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 3 115 6 0 0 43 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 47 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 46 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 21 51 A U - - MP 117 116 6 121 6 2 2 45 67 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -4.292 -3.205 -4.262 3.579 -4.867 -5.988 -0.532 -4.270 -4.146 0.536 -4.718 -0.609 -0.946 -5.083 -2.470 -3.075 ML 118 116 6 121 6 1 1 44 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 44 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 41 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 45 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 44 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 22 50 G C - - MP 123 122 6 127 6 2 2 43 65 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -5.261 -3.346 -5.428 -0.158 -5.960 -4.890 -1.195 -5.694 -4.650 3.741 -4.953 -1.070 -1.567 -4.803 -3.263 -4.297 ML 124 122 6 127 6 1 1 42 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 42 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 40 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 43 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 43 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 23 49 G C - - MP 129 128 6 133 4 2 2 41 63 -7.232 -7.439 -0.044 -5.853 -5.261 -3.346 -5.428 -0.158 -5.960 -4.890 -1.195 -5.694 -4.650 3.741 -4.953 -1.070 -1.567 -4.803 -3.263 -4.297 ML 130 128 6 133 4 1 1 41 63 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 1 41 63 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 0 40 62 -4.568 -4.250 -2.265 -0.520 IL 133 133 5 133 4 1 1 42 65 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 1 42 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 24 - G - - - ML 135 134 6 137 3 1 1 39 61 -8.604 -0.016 -6.922 -2.136 -3.434 1.823 -2.820 D 136 134 6 137 3 0 0 38 60 -5.620 -0.734 -1.403 IL 137 137 3 137 3 1 1 40 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 48 - u - - MR 138 137 3 140 5 1 1 38 60 -7.327 -0.033 -7.143 -7.355 -8.247 0.139 -0.638 -1.226 0.871 D 139 137 3 140 5 0 0 37 59 -5.352 -0.707 -2.978 -4.409 -2.404 IR 140 140 3 140 5 1 1 38 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 25 47 G C - - MP 141 140 3 145 6 2 2 37 59 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -5.261 -3.346 -5.428 -0.158 -5.960 -4.890 -1.195 -5.694 -4.650 3.741 -4.953 -1.070 -1.567 -4.803 -3.263 -4.297 ML 142 140 3 145 6 1 1 36 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 3 145 6 1 1 35 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 3 145 6 0 0 33 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 37 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 36 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 26 46 U A - - MP 147 146 6 151 6 2 2 35 57 -9.222 -9.162 -0.019 -7.938 -8.218 -8.613 -4.853 -4.689 -4.615 -0.943 -3.426 -5.116 0.911 -4.164 -4.614 -0.771 -4.954 -2.567 3.570 -4.974 -1.087 -3.360 ML 148 146 6 151 6 1 1 34 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 34 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 32 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 35 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 34 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 27 45 u g - - MP 153 152 6 157 4 2 2 33 55 -7.232 -7.439 -0.044 -5.853 -4.239 -4.264 -3.966 -0.581 -2.719 -4.390 1.576 -3.505 -4.012 -0.411 -4.315 -2.359 1.636 -4.313 2.914 -2.881 ML 154 152 6 157 4 1 1 33 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 32 55 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 31 53 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 34 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 33 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 28 - U - - - ML 159 158 6 161 3 1 1 31 53 -8.230 -0.017 -6.884 -1.246 -0.646 -1.995 1.427 D 160 158 6 161 3 0 0 29 51 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 32 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 29 - U - - - ML 162 161 3 164 3 1 1 30 52 -8.230 -0.017 -6.884 -0.656 -1.228 -1.773 1.404 D 163 161 3 164 3 0 0 28 50 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 31 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 30 - u - - - ML 165 164 3 167 3 1 1 29 51 -8.230 -0.017 -6.884 -0.436 -0.693 -0.030 0.734 D 166 164 3 167 3 0 0 27 49 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 30 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 31 - u - - - ML 168 167 3 170 3 1 1 28 50 -8.230 -0.017 -6.884 0.344 -0.894 -0.300 0.465 D 169 167 3 170 3 0 0 26 48 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 29 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 32 - c - - - ML 171 170 3 173 3 1 1 27 49 -8.230 -0.017 -6.884 -0.214 0.577 -0.820 0.111 D 172 170 3 173 3 0 0 25 47 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 28 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 33 - c - - - ML 174 173 3 176 3 1 1 26 48 -8.230 -0.017 -6.884 -0.449 0.812 -0.723 -0.143 D 175 173 3 176 3 0 0 24 46 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 27 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 34 - U - - - ML 177 176 3 179 3 1 1 25 47 -8.230 -0.174 -3.178 -1.075 -1.248 -1.359 1.441 D 178 176 3 179 3 0 0 23 45 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 26 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 35 - c - - - ML 180 179 3 182 3 1 1 24 46 -8.074 -0.019 -6.728 -0.335 0.695 -1.366 0.263 D 181 179 3 182 3 0 0 22 44 -7.268 -2.781 -0.238 IL 182 182 3 182 3 1 1 25 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 36 - u - - - ML 183 182 3 185 3 1 1 23 45 -8.074 -0.019 -6.728 -0.216 0.317 -0.776 0.388 D 184 182 3 185 3 0 0 22 44 -7.268 -2.781 -0.238 IL 185 185 3 185 3 1 1 24 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 37 - a - - - ML 186 185 3 188 3 1 1 22 44 -2.516 -0.294 -6.728 0.482 -1.153 0.454 -0.351 D 187 185 3 188 3 0 0 22 44 -0.895 -2.781 -1.659 IL 188 188 3 188 3 1 1 23 45 -1.208 -0.881 -5.388 0.000 0.000 0.000 0.000 [ MATL 45 ] 42 - A - - - ML 189 188 3 191 3 1 1 15 33 -8.230 -0.017 -6.884 1.465 -1.300 -1.580 -1.005 D 190 188 3 191 3 0 0 15 33 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 43 - c - - - ML 192 191 3 194 3 1 1 13 31 -8.230 -0.017 -6.884 -0.094 0.603 -1.340 0.201 D 193 191 3 194 3 0 0 13 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 44 - u - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 -0.193 -0.939 -0.589 0.955 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 48 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME mir-155 ACC RF00731 DESC microRNA mir-155 LENG 65 MAXL 146 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Oct 31 22:56:36 2021 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 25 EFFN 3.652954 CKSUM 2666455095 STATS LOCAL MSV -8.1602 0.71921 STATS LOCAL VITERBI -8.8763 0.71921 STATS LOCAL FORWARD -3.9624 0.71921 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.36384 1.60367 1.48709 1.14843 1.38629 1.38629 1.38629 1.38629 0.33092 4.11738 1.32634 1.46634 0.26236 0.00000 * 1 1.67427 1.06519 1.77819 1.20748 1 c - - : 1.38629 1.38629 1.38629 1.38629 0.04435 3.83082 3.83082 1.46634 0.26236 1.01371 0.45078 2 1.84657 1.83310 1.92782 0.62206 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.03942 3.94623 3.94623 1.46634 0.26236 2.53830 0.08230 3 1.59683 2.37306 0.66226 1.66821 3 G - - : 1.38629 1.38629 1.38629 1.38629 0.03942 3.94623 3.94623 1.46634 0.26236 0.17198 1.84515 4 2.39337 1.60072 2.19855 0.51758 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 5 3.62988 2.42785 3.45388 0.15825 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 6 0.17764 3.46374 2.33598 3.36030 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 7 0.17756 3.46435 2.33614 3.36110 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 8 3.63563 2.42846 3.45693 0.15790 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 9 2.93858 3.76706 0.10609 3.70534 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 10 3.76067 0.13615 3.60319 2.56672 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 11 3.63370 2.42825 3.45591 0.15802 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 12 0.35758 2.71865 1.85114 2.55601 12 A - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 13 0.17773 3.46293 2.33578 3.35925 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 14 3.35091 1.80375 3.19068 0.27559 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 15 2.79850 0.27796 3.40383 1.90701 15 C - - - 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 16 3.23427 4.17453 0.08181 3.73903 16 G - - - 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 17 3.12871 3.00777 3.66220 0.12653 17 U - - - 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 18 3.23427 4.17453 0.08181 3.73903 18 G - - - 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 19 0.08709 3.78040 3.45550 3.53984 19 A - - - 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 20 3.30740 2.07308 3.11088 0.23189 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 21 0.17774 3.46287 2.33577 3.35917 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 22 2.93855 3.76700 0.10609 3.70527 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 23 2.93882 3.76740 0.10605 3.70581 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 24 3.23427 4.17453 0.08181 3.73903 24 G - - - 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 25 2.94418 3.77506 0.10526 3.71619 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 26 3.64661 2.42959 3.46273 0.15723 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 27 3.25910 1.78107 3.08287 0.29130 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 28 2.48702 1.90072 3.01100 0.33109 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 29 1.95637 2.42718 2.83664 0.34007 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 30 1.78232 1.92179 1.37137 0.84015 30 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 31 1.13807 2.08504 1.58924 1.04645 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 32 1.58930 0.92057 1.99362 1.34157 32 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 33 1.79732 0.74460 1.91505 1.55117 33 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 34 2.36095 2.44861 2.45087 0.31056 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.15469 4.11738 2.06330 1.46634 0.26236 1.09861 0.40547 35 1.69195 0.82814 2.47010 1.22281 35 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03732 4.00001 4.00001 1.46634 0.26236 2.28235 0.10763 36 1.58707 1.11293 1.95611 1.12248 36 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03732 4.00001 4.00001 1.46634 0.26236 0.22827 1.58920 37 1.04395 2.28622 1.01602 1.69143 37 g - - _ 1.38629 1.38629 1.38629 1.38629 0.22229 1.69809 4.11738 0.96962 0.47679 1.09861 0.40547 38 0.31152 2.37910 2.67835 2.24093 42 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 39 1.48891 0.89839 2.44566 1.27122 43 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 40 1.56406 2.14322 1.80866 0.67420 44 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 41 1.58815 3.24252 0.34580 3.01633 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 42 0.17800 3.66269 2.26588 3.39167 46 A - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 43 3.91597 0.12536 3.63645 2.63730 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 44 1.29152 1.88432 2.33453 0.74158 48 u - - - 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 45 3.86393 0.12812 3.61106 2.62775 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 46 3.85701 0.12849 3.60764 2.62645 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 47 3.55321 2.68801 3.26042 0.14505 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 48 0.30492 3.26298 1.72870 3.05700 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.25978 1.54885 4.11738 0.14682 1.99107 1.09861 0.40547 49 2.33327 0.42592 2.10239 2.05818 54 C - - - 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 50 0.58459 1.50194 2.46148 2.00502 55 A - - - 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 51 2.52876 1.99398 3.05058 0.30550 56 U - - - 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 52 1.87032 3.34704 0.26678 3.10349 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 53 3.57100 2.69113 3.26854 0.14386 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 54 2.06711 2.12311 2.51885 0.39566 59 U - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 55 0.17936 3.64842 2.26341 3.37637 60 A - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 56 2.84628 3.76742 0.11699 3.53229 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 57 3.87305 0.12762 3.61556 2.62945 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 58 0.17911 3.65109 2.26388 3.37923 63 A - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 59 3.57953 2.69261 3.27240 0.14330 64 U - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 60 3.58305 2.69322 3.27399 0.14307 65 U - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 61 0.17846 3.65783 2.26505 3.38645 66 A - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 62 0.83771 2.37294 1.07190 2.02694 67 a - - > 1.38629 1.38629 1.38629 1.38629 0.03312 4.11738 4.11738 1.46634 0.26236 1.09861 0.40547 63 2.14385 0.61118 2.54919 1.33963 68 C - - : 1.38629 1.38629 1.38629 1.38629 0.12560 4.11738 2.28528 1.46634 0.26236 1.09861 0.40547 64 0.45630 1.83898 2.46916 2.09767 69 A - - : 1.38629 1.38629 1.38629 1.38629 0.20035 4.02805 1.80945 1.46634 0.26236 2.10985 0.12926 65 1.37008 1.89885 1.03005 1.43053 70 g - - : 1.38629 1.38629 1.38629 1.38629 0.02153 3.84923 * 1.46634 0.26236 0.00000 * //