# STOCKHOLM 1.0
#=GF ID mir-143
#=GF AC RF00683
#=GF DE mir-143 microRNA precursor family
#=GF AU Griffiths-Jones SR; 0000-0001-6043-807X
#=GF GA 60.0
#=GF NC 50.9
#=GF TC 60.3
#=GF SE Griffiths-Jones SR
#=GF SS Predicted; RNAalifold
#=GF TP Gene; miRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 25.00 -Z 2958934 CM SEQDB
#=GF DR MIPF; MIPF0000094;
#=GF DR SO; 0001244; pre_miRNA;
#=GF DR GO; 0016442; RISC complex;
#=GF DR GO; 0035195; miRNA-mediated post-transcriptional gene silencing;
#=GF RN [1]
#=GF RM 15937218
#=GF RT The developmental miRNA profiles of zebrafish as determined by small RNA
#=GF RT cloning.
#=GF RA Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John
#=GF RA B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T
#=GF RL Genes Dev. 2005;19:1288-1293.
#=GF RN [2]
#=GF RM 17604727
#=GF RT A mammalian microRNA expression atlas based on small RNA library
#=GF RT sequencing.
#=GF RA Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S,
#=GF RA Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V,
#=GF RA Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B,
#=GF RA Bissels U, Inman J, Phan Q, Chien M, Weir DB, Choksi R, De Vita G,
#=GF RA Frezzetti D, Trompeter HI, Hornung V, Teng G, Hartmann G, Palkovits M, Di
#=GF RA Lauro R, Wernet P, Macino G, Rogler CE, Nagle JW, Ju J, Papavasiliou FN,
#=GF RA Benzing T, Lichter P, Tam W, Brownstein MJ, Bosio A, Borkhardt A, Russo
#=GF RA JJ, Sander C, Zavolan M, Tuschl T
#=GF RL Cell. 2007;129:1401-1414.
#=GF RN [3]
#=GF RM 12007417
#=GF RT Identification of tissue-specific microRNAs from mouse.
#=GF RA Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T
#=GF RL Curr Biol. 2002;12:735-739.
#=GF RN [4]
#=GF RM 30423142
#=GF RT miRBase: from microRNA sequences to function.
#=GF RA Kozomara A, Birgaoanu M, Griffiths-Jones S
#=GF RL Nucleic Acids Res. 2019;47:D155.
#=GF CC Imported from miRBase.
#=GF WK Mir-143
#=GF SQ 30

URS0000759F8C_7955/8-91   AGUCGUCUGGCCCGCGGUGCAGUGCUGCAUCUCUGGUCAA-CUGGGAGUCUGAGAUGAAGCACUGUAGCUCGGGAGGACAACACU
URS0000AA5295_7998/1-55   ---------------GGUGCAGUGCUGCAUCUCUGGUCAA-CUGGGAGUCUGAGAUGAAGCACUGUAGCUC--------------
URS0000D509E5_7962/1-82   -GUCCUCAGGCCCAAGGUGCAGUGCUGCAUCUCUGGUCAA-CUGGGAGUCUGAGAUGAAGCACUGUAGCUCGGGAGGAAGGGCA-
URS000075DBC2_10116/11-94 UGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGGGAGAAGA
URS000075A247_10029/2-80  UGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGGGA-----
URS0000008A99_9600/12-95  UGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGAGAGAAGU
URS0000008A99_9519/12-95  UGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGAGAGAAGU
URS0000008A99_9593/12-95  UGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGAGAGAAGU
URS0000008A99_9606/12-95  UGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGAGAGAAGU
URS000065E052_9544/12-95  UGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGAGAGAAGU
URS00003F8F8C_9598/12-95  UGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGAGAGAAGU
URS00003F8F8C_9597/12-95  UGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGAGAGAAGU
URS000075ADD1_10090/1-63  ----------CCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGG-----------
URS000075A5DD_9796/1-64   ---------GCCCGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGG-----------
URS000075EDA3_9940/7-90   UGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCGGGAAGGGAGAAGU
URS000075EDA3_9925/7-90   UGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCGGGAAGGGAGAAGU
URS000075DC1A_9913/7-90   UGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCGGGAAGGGAGAAGU
URS000075A825_9258/3-86   UGUCUCCCAGCCCAAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGUGAGUCUGAGAUGAAGCACUGUAGCUCGGGAAGGGAGGAGC
URS00007E3939_28377/2-85  UGUCUCCCAGCCCAAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGUGAGUCUGAGAUGAAGCACUGUAGCUCGGGAAGGGAGGAAC
URS000075D82D_8364/1-83   UGUCUCCCAGCCCAAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGUGAGUCUGAGAUGAAGCACUGUAGCUCGGGAAGGGGGAAU-
URS0000D537D9_8665/1-68   ----------CCCAAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGUGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGGG------
URS0000D53EC0_9417/1-79   -----CCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCGGGAAGGGAGAAGC
URS00007E4C37_246437/1-57 --------------AGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCG-------------
URS000075A6E2_9823/1-80   -GUCCCCCAGCCGGAGGUGCAGUGCUGCAUCUCUGGUCAG-CUGGGAGUCUGAGAUGAAGCACUGUAGCUCGGGAAGGGAGA---
URS00007E380E_9615/1-55   ---------------GGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUC--------------
URS0000D52FFF_7757/1-70   -------UACCCGGGGGUGCAGUGCUUUACCUCUGGUUGGGUUGAGAGUCUGAGAUGAAGCACUGUAACUCCGGAUG--------
URS0000D52727_8030/1-55   ---------------GGUGCAGUGCUGCAUCUCUGGUCAA-UUGGGAGUCUGAGAUGAAGCACUGUAGCUC--------------
URS000075CB57_13616/1-63  ----------CCCGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGUGAGUCUGAGAUGAAGCACUGUAGCUCGGG-----------
URS000075C0EC_8090/13-96  AUCUCUGCUGCCCAUGGUGCAGUGCUGCAUCUCUGGUCAG-UUGAUAGUCUGAGAUGAAGCACUGUAGCUCGGGACGGAGGGCAG
URS0000D561C1_29078/1-75  -----CCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAG-UUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGGGAG----
#=GC SS_cons              ::::::::::<<<--<-<<<<<<<<<-<<<<<<-<<<<__.____>>->>->>>>>>->>>>>>>>>->-->>>:::::::::::
#=GC RF                   ugUcucccaGCCcgaGGUgCAGUGCUGCAuCUCUGgUcAG.UUGggAGuCUGAGaUGAAGCACUGuAGCUCgGGAaGggAGaagu
//
