INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-140 ACC RF00678 DESC microRNA mir-140 STATES 241 NODES 56 CLEN 79 W 95 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 02:51:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00678/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 32 EFFN 1.222656 CKSUM 1589737775 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 70.70 NC 69.30 EFP7GF -6.3872 0.71907 ECMLC 0.67248 -5.79748 2.42182 1600000 301765 0.003977 ECMGC 0.48364 -14.52903 -2.96364 1600000 107473 0.003722 ECMLI 0.67050 -3.81403 3.60186 1600000 173242 0.006927 ECMGI 0.51265 -9.59620 0.29930 1600000 63855 0.006264 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 95 115 -6.625 -6.832 -0.312 -2.512 IL 1 1 2 1 4 1 16 99 120 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 16 98 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 1 16 95 115 -7.456 -0.029 -6.110 -0.198 -0.416 -0.622 0.790 D 4 2 3 5 3 0 10 93 113 -7.190 -2.347 -0.328 IL 5 5 3 5 3 1 15 97 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 16 94 114 -7.475 -0.029 -6.129 -0.571 -1.598 1.318 -0.989 D 7 5 3 8 3 0 9 92 112 -7.127 -2.640 -0.265 IL 8 8 3 8 3 1 15 96 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 1 15 93 113 -7.475 -0.029 -6.129 -0.650 -0.812 -1.321 1.259 D 10 8 3 11 3 0 9 91 111 -7.127 -2.640 -0.265 IL 11 11 3 11 3 1 14 95 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 14 92 112 -7.475 -0.029 -6.129 -0.571 -1.598 1.318 -0.989 D 13 11 3 14 3 0 8 90 110 -7.127 -2.640 -0.265 IL 14 14 3 14 3 1 14 94 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 1 13 91 111 -7.475 -0.029 -6.129 -0.650 -0.812 -1.321 1.259 D 16 14 3 17 3 0 8 89 109 -7.127 -1.794 -0.505 IL 17 17 3 17 3 1 13 93 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - C - - - ML 18 17 3 20 3 1 13 90 110 -7.528 -0.028 -6.183 -0.769 1.205 -1.537 -0.389 D 19 17 3 20 3 0 7 88 108 -6.929 -2.442 -0.308 IL 20 20 3 20 3 1 12 92 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - c - - - ML 21 20 3 23 3 1 12 89 109 -7.528 -0.028 -6.183 -0.390 0.969 -1.253 -0.218 D 22 20 3 23 3 0 7 87 107 -6.929 -2.442 -0.308 IL 23 23 3 23 3 1 12 91 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 1 11 88 108 -7.528 -0.028 -6.183 -0.472 -0.316 -1.181 1.025 D 25 23 3 26 3 0 6 86 106 -6.929 -1.767 -0.519 IL 26 26 3 26 3 1 11 90 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 1 10 87 107 -7.987 -0.128 -3.629 -0.346 -1.119 1.048 -0.544 D 28 26 3 29 3 0 6 85 105 -6.005 -1.119 -0.933 IL 29 29 3 29 3 1 11 88 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 79 - c - - MR 30 29 3 32 3 1 11 86 106 -7.885 -0.026 -6.203 -0.414 0.742 -1.162 0.176 D 31 29 3 32 3 0 5 84 103 -7.288 -2.466 -0.299 IR 32 32 3 32 3 1 10 87 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 78 - a - - MR 33 32 3 35 3 1 10 85 105 -7.885 -0.026 -6.203 0.789 -0.993 0.023 -0.409 D 34 32 3 35 3 0 4 83 103 -7.288 -2.466 -0.299 IR 35 35 3 35 3 1 10 86 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 77 - U - - MR 36 35 3 38 3 1 10 84 104 -7.885 -0.026 -6.203 -0.619 -0.789 -1.287 1.239 D 37 35 3 38 3 0 4 82 102 -7.288 -2.466 -0.299 IR 38 38 3 38 3 1 9 85 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 76 - A - - MR 39 38 3 41 3 1 9 83 103 -7.885 -0.026 -6.203 1.383 -1.394 -1.120 -0.858 D 40 38 3 41 3 0 3 81 101 -7.288 -1.409 -0.696 IR 41 41 3 41 3 1 8 84 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 75 - G - - MR 42 41 3 44 3 1 8 82 102 -7.970 -0.024 -6.288 -0.712 -1.771 1.405 -1.158 D 43 41 3 44 3 0 3 80 100 -6.974 -2.152 -0.383 IR 44 44 3 44 3 1 7 83 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 74 - G - - MR 45 44 3 47 3 1 7 81 101 -7.970 -0.024 -6.288 -0.712 -1.771 1.405 -1.158 D 46 44 3 47 3 0 2 79 99 -6.974 -1.882 -0.473 IR 47 47 3 47 3 1 7 82 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 73 - a - - MR 48 47 3 50 3 1 7 80 100 -7.986 -0.024 -6.303 0.789 -0.852 -0.097 -0.352 D 49 47 3 50 3 0 2 78 98 -6.906 -1.357 -0.734 IR 50 50 3 50 3 1 6 81 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 72 - C - - MR 51 50 3 53 3 1 6 79 99 -8.034 -0.023 -6.352 -0.951 1.316 -1.733 -0.531 D 52 50 3 53 3 0 1 77 97 -6.664 -1.342 -0.747 IR 53 53 3 53 3 1 5 80 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 71 - A - - MR 54 53 3 56 5 1 5 78 98 -6.824 -0.120 -6.639 -4.146 -7.743 1.543 -1.754 -1.448 -1.242 D 55 53 3 56 5 0 1 77 96 -5.407 -0.673 -3.033 -4.464 -2.459 IR 56 56 3 56 5 1 4 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 10 70 c g - - MP 57 56 3 61 6 2 6 77 97 -8.963 -8.902 -0.023 -7.679 -7.959 -8.354 -3.411 -3.317 -3.290 0.331 -2.286 -3.844 2.870 -2.987 -3.321 0.664 -3.698 -1.344 1.336 -3.542 0.810 -2.210 ML 58 56 3 61 6 1 2 76 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 3 61 6 1 2 76 96 -7.270 -5.999 -1.171 -5.977 -1.111 -4.190 0.147 -0.729 0.508 -0.205 D 60 56 3 61 6 0 0 74 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 3 77 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 3 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 11 69 C G - - MP 63 62 6 67 4 2 4 75 95 -6.625 -6.832 -0.067 -5.246 -3.976 -3.821 -3.757 -0.115 -2.617 -4.241 3.323 -3.366 -3.793 0.231 -4.109 -1.763 0.947 -4.079 -0.315 -2.655 ML 64 62 6 67 4 1 1 75 95 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 4 1 1 75 95 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 0 74 94 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 3 77 96 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 2 76 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 12 - A - - - ML 69 68 6 71 5 1 3 73 92 -6.837 -0.047 -6.653 -6.865 -7.757 1.554 -1.785 -1.475 -1.275 D 70 68 6 71 5 0 0 71 91 -4.959 -0.803 -4.221 -2.596 -2.508 IL 71 71 3 71 5 1 1 73 92 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 13 68 G C - - MP 72 71 3 76 6 2 4 71 91 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -4.168 -2.825 -4.231 0.567 -4.424 -4.455 0.075 -4.420 -3.928 3.463 -4.310 -0.510 -0.329 -4.085 -1.935 -3.118 ML 73 71 3 76 6 1 1 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 3 76 6 1 1 70 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 3 76 6 0 0 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 71 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 14 67 u a - - MP 78 77 6 82 6 2 4 69 89 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.636 -3.431 -3.530 0.228 -2.602 -4.142 1.710 -3.254 -3.543 0.590 -3.941 -1.344 2.972 -3.803 -0.292 -2.415 ML 79 77 6 82 6 1 1 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 68 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 69 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 15 66 G C - - MP 84 83 6 88 6 2 4 67 87 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -4.168 -2.825 -4.231 0.567 -4.424 -4.455 0.075 -4.420 -3.928 3.463 -4.310 -0.510 -0.329 -4.085 -1.935 -3.118 ML 85 83 6 88 6 1 1 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 66 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 67 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 16 65 G C - - MP 90 89 6 94 6 2 4 65 85 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -4.168 -2.825 -4.231 0.567 -4.424 -4.455 0.075 -4.420 -3.928 3.463 -4.310 -0.510 -0.329 -4.085 -1.935 -3.118 ML 91 89 6 94 6 1 1 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 64 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 65 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 17 64 u a - - MP 96 95 6 100 6 2 3 63 83 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.636 -3.431 -3.530 0.228 -2.602 -4.142 1.710 -3.254 -3.543 0.590 -3.941 -1.344 2.972 -3.803 -0.292 -2.415 ML 97 95 6 100 6 1 1 62 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 62 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 63 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 18 63 u a - - MP 102 101 6 106 6 2 3 61 81 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.636 -3.431 -3.530 0.228 -2.602 -4.142 1.710 -3.254 -3.543 0.590 -3.941 -1.344 2.972 -3.803 -0.292 -2.415 ML 103 101 6 106 6 1 1 60 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 60 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 57 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 19 62 u g - - MP 108 107 6 112 6 2 3 59 79 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.500 -3.422 -3.333 0.182 -2.286 -3.851 2.040 -3.002 -3.375 0.483 -3.728 -1.473 1.230 -3.627 2.462 -2.276 ML 109 107 6 112 6 1 1 58 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 58 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 55 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 59 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 20 61 u a - - MP 114 113 6 118 6 2 3 57 77 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.636 -3.431 -3.530 0.228 -2.602 -4.142 1.710 -3.254 -3.543 0.590 -3.941 -1.344 2.972 -3.803 -0.292 -2.415 ML 115 113 6 118 6 1 1 56 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 56 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 53 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 57 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 21 60 a u - - MP 120 119 6 124 6 2 2 55 75 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.355 -2.507 -3.398 2.941 -3.523 -4.557 0.754 -3.463 -3.314 1.558 -3.839 -0.065 0.331 -3.816 -1.192 -2.263 ML 121 119 6 124 6 1 1 54 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 54 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 51 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 55 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 22 59 C G - - MP 126 125 6 130 6 2 2 53 73 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.976 -3.821 -3.757 -0.115 -2.617 -4.241 3.323 -3.366 -3.793 0.231 -4.109 -1.763 0.947 -4.079 -0.315 -2.655 ML 127 125 6 130 6 1 1 52 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 53 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 23 58 C G - - MP 132 131 6 136 6 2 2 51 71 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.976 -3.821 -3.757 -0.115 -2.617 -4.241 3.323 -3.366 -3.793 0.231 -4.109 -1.763 0.947 -4.079 -0.315 -2.655 ML 133 131 6 136 6 1 1 50 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 50 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 24 57 C G - - MP 138 137 6 142 6 2 2 49 69 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.976 -3.821 -3.757 -0.115 -2.617 -4.241 3.323 -3.366 -3.793 0.231 -4.109 -1.763 0.947 -4.079 -0.315 -2.655 ML 139 137 6 142 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 48 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 25 56 u a - - MP 144 143 6 148 4 2 2 47 67 -6.625 -6.832 -0.067 -5.246 -3.636 -3.431 -3.530 0.228 -2.602 -4.142 1.710 -3.254 -3.543 0.590 -3.941 -1.344 2.972 -3.803 -0.292 -2.415 ML 145 143 6 148 4 1 1 48 67 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 4 1 1 47 67 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 147 143 6 148 4 0 0 46 66 -4.568 -4.250 -2.265 -0.520 IL 148 148 5 148 4 1 1 49 69 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 149 149 6 149 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 26 - A - - - ML 150 149 6 152 3 1 1 45 64 -8.079 -0.023 -6.396 1.554 -1.785 -1.475 -1.275 D 151 149 6 152 3 0 0 44 63 -5.620 -0.734 -1.403 IL 152 152 3 152 3 1 1 46 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 55 - C - - MR 153 152 3 155 5 1 1 44 63 -6.837 -0.047 -6.653 -6.865 -7.757 -1.053 1.370 -1.843 -0.611 D 154 152 3 155 5 0 0 43 62 -5.352 -0.707 -2.978 -4.409 -2.404 IR 155 155 3 155 5 1 1 44 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 27 54 u a - - MP 156 155 3 160 6 2 2 43 62 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.636 -3.431 -3.530 0.228 -2.602 -4.142 1.710 -3.254 -3.543 0.590 -3.941 -1.344 2.972 -3.803 -0.292 -2.415 ML 157 155 3 160 6 1 1 41 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 3 160 6 1 1 41 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 3 160 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 42 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 28 53 G C - - MP 162 161 6 166 6 2 2 41 60 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -4.168 -2.825 -4.231 0.567 -4.424 -4.455 0.075 -4.420 -3.928 3.463 -4.310 -0.510 -0.329 -4.085 -1.935 -3.118 ML 163 161 6 166 6 1 1 39 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 40 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 29 52 G C - - MP 168 167 6 172 6 2 2 39 58 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -4.168 -2.825 -4.231 0.567 -4.424 -4.455 0.075 -4.420 -3.928 3.463 -4.310 -0.510 -0.329 -4.085 -1.935 -3.118 ML 169 167 6 172 6 1 1 37 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 6 1 1 37 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 171 167 6 172 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 38 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 30 51 u a - - MP 174 173 6 178 6 2 2 37 56 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.636 -3.431 -3.530 0.228 -2.602 -4.142 1.710 -3.254 -3.543 0.590 -3.941 -1.344 2.972 -3.803 -0.292 -2.415 ML 175 173 6 178 6 1 1 35 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 6 1 1 35 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 177 173 6 178 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 178 178 5 178 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 179 179 6 179 5 1 1 36 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 31 50 a u - - MP 180 179 6 184 6 2 2 35 54 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.355 -2.507 -3.398 2.941 -3.523 -4.557 0.754 -3.463 -3.314 1.558 -3.839 -0.065 0.331 -3.816 -1.192 -2.263 ML 181 179 6 184 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 182 179 6 184 6 1 1 33 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 183 179 6 184 6 0 0 31 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 184 184 5 184 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 185 185 6 185 5 1 1 34 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 32 49 G C - - MP 186 185 6 190 6 2 2 33 52 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -4.168 -2.825 -4.231 0.567 -4.424 -4.455 0.075 -4.420 -3.928 3.463 -4.310 -0.510 -0.329 -4.085 -1.935 -3.118 ML 187 185 6 190 6 1 1 32 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 188 185 6 190 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 189 185 6 190 6 0 0 30 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 190 190 5 190 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 191 191 6 191 5 1 1 32 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 33 48 g u - - MP 192 191 6 196 4 2 2 31 50 -6.625 -6.832 -0.067 -5.246 -3.264 -2.193 -3.396 1.322 -3.821 -4.573 0.498 -3.474 -3.169 1.828 -3.675 2.578 0.136 -3.838 -1.439 -2.183 ML 193 191 6 196 4 1 1 31 51 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 194 191 6 196 4 1 1 31 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 195 191 6 196 4 0 0 30 49 -4.568 -4.250 -2.265 -0.520 IL 196 196 5 196 4 1 1 33 52 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 197 197 6 197 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 34 - U - - - ML 198 197 6 200 3 1 1 28 47 -7.667 -0.025 -6.321 -0.960 -1.054 -1.660 1.426 D 199 197 6 200 3 0 0 27 46 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - u - - - ML 201 200 3 203 5 1 1 27 46 -6.837 -0.047 -6.653 -6.865 -7.757 -0.358 -0.718 -0.564 0.952 D 202 200 3 203 5 0 0 26 45 -4.959 -0.803 -4.221 -2.596 -2.508 IL 203 203 3 203 5 1 1 28 46 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 36 47 a u - - MP 204 203 3 208 6 2 2 26 45 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.355 -2.507 -3.398 2.941 -3.523 -4.557 0.754 -3.463 -3.314 1.558 -3.839 -0.065 0.331 -3.816 -1.192 -2.263 ML 205 203 3 208 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 206 203 3 208 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 207 203 3 208 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 208 208 5 208 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 209 209 6 209 5 1 1 26 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 37 46 C G - - MP 210 209 6 214 6 2 2 24 43 -8.993 -8.932 -0.023 -7.708 -7.988 -8.383 -3.976 -3.821 -3.757 -0.115 -2.617 -4.241 3.323 -3.366 -3.793 0.231 -4.109 -1.763 0.947 -4.079 -0.315 -2.655 ML 211 209 6 214 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 212 209 6 214 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 213 209 6 214 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 214 214 5 214 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 215 215 6 215 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 38 45 g c - - MP 216 215 6 220 4 2 2 22 41 -6.625 -6.832 -0.067 -5.246 -2.709 -2.022 -2.865 1.560 -2.967 -3.689 1.100 -1.897 -2.791 1.806 -3.252 1.780 0.786 -3.033 -0.760 -1.826 ML 217 215 6 220 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 218 215 6 220 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 219 215 6 220 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 220 220 5 220 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 221 221 6 221 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 39 - U - - - ML 222 221 6 224 3 1 1 19 38 -7.667 -0.025 -6.321 -0.960 -1.054 -1.660 1.426 D 223 221 6 224 3 0 0 18 37 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 40 - C - - - ML 225 224 3 227 3 1 1 18 36 -7.667 -0.025 -6.321 -0.634 1.095 -1.232 -0.333 D 226 224 3 227 3 0 0 17 36 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 41 - A - - - ML 228 227 3 230 3 1 1 16 35 -7.667 -0.025 -6.321 1.413 -1.525 -1.025 -1.005 D 229 227 3 230 3 0 0 16 34 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 42 - U - - - ML 231 230 3 233 3 1 1 15 33 -7.667 -0.025 -6.321 -0.571 -0.791 -1.119 1.194 D 232 230 3 233 3 0 0 15 33 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 43 - G - - - ML 234 233 3 236 3 1 1 13 32 -7.667 -0.025 -6.321 -0.644 -1.842 1.408 -1.229 D 235 233 3 236 3 0 0 13 32 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 44 - C - - - ML 237 236 3 239 2 1 1 1 1 * 0.000 -1.053 1.370 -1.843 -0.611 D 238 236 3 239 2 0 0 0 0 * 0.000 IL 239 239 3 239 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 240 239 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-140 ACC RF00678 DESC microRNA mir-140 LENG 79 MAXL 171 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 02:51:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00678/CM NSEQ 32 EFFN 1.964844 CKSUM 1589737775 STATS LOCAL MSV -8.8412 0.71907 STATS LOCAL VITERBI -9.3404 0.71907 STATS LOCAL FORWARD -3.6376 0.71907 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.51082 1.38769 1.29626 1.36232 1.38629 1.38629 1.38629 1.38629 0.24557 3.79109 1.63386 1.46634 0.26236 0.00000 * 1 1.62951 1.72814 1.88148 0.74655 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.05610 3.60162 3.60162 1.46634 0.26236 1.86492 0.16831 2 2.12804 2.91254 0.29660 2.48586 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.05510 3.61918 3.61918 1.46634 0.26236 2.30237 0.10538 3 2.11940 2.17128 2.60953 0.36774 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.05510 3.61918 3.61918 1.46634 0.26236 2.30237 0.10538 4 2.12804 2.91254 0.29660 2.48586 4 G - - : 1.38629 1.38629 1.38629 1.38629 0.05510 3.61918 3.61918 1.46634 0.26236 2.30237 0.10538 5 2.11940 2.17128 2.60953 0.36774 5 U - - : 1.38629 1.38629 1.38629 1.38629 0.05510 3.61918 3.61918 1.46634 0.26236 1.25479 0.33566 6 2.31593 0.34951 2.87519 1.96694 6 C - - : 1.38629 1.38629 1.38629 1.38629 0.05243 3.66759 3.66759 1.46634 0.26236 2.09766 0.13096 7 1.87489 0.52598 2.53552 1.73483 7 C - - : 1.38629 1.38629 1.38629 1.38629 0.05243 3.66759 3.66759 1.46634 0.26236 2.09766 0.13096 8 1.88809 1.65195 2.39390 0.56971 8 U - - : 1.38629 1.38629 1.38629 1.38629 0.05243 3.66759 3.66759 1.46634 0.26236 1.22810 0.34651 9 1.81385 2.33379 0.51336 1.95498 9 G - - : 1.38629 1.38629 1.38629 1.38629 0.05059 3.70237 3.70237 1.46634 0.26236 1.43108 0.27319 10 2.48442 0.64388 2.23138 1.25880 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.04981 3.71746 3.71746 1.46634 0.26236 0.39374 1.12248 11 2.99452 0.29346 2.75082 1.96335 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 12 0.19078 3.04902 2.79200 2.73369 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 13 2.46183 3.04023 0.20308 2.98212 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 14 2.76379 1.75445 2.49116 0.38400 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 15 2.46289 3.04137 0.20280 2.98375 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 16 2.46286 3.04134 0.20281 2.98370 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 17 2.76387 1.75445 2.49119 0.38399 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 18 2.76362 1.75444 2.49109 0.38403 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 19 2.77370 1.40001 2.54385 0.49035 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 20 2.76314 1.75443 2.49090 0.38410 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 21 0.42959 2.54750 1.67230 2.48732 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 22 3.00133 0.29254 2.75386 1.96448 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 23 3.00115 0.29256 2.75377 1.96445 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 24 3.00099 0.29258 2.75370 1.96442 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 25 2.76241 1.75441 2.49061 0.38420 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 26 0.19078 3.04902 2.79200 2.73369 26 A - - - 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 27 2.76223 1.75441 2.49054 0.38423 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 28 2.46358 3.04211 0.20262 2.98480 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 29 2.46417 3.04275 0.20247 2.98570 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 30 2.76599 1.75450 2.49204 0.38368 30 U - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 31 0.42926 2.54845 1.67241 2.48876 31 A - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 32 2.46357 3.04210 0.20262 2.98478 32 G - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 33 1.83722 2.70272 0.35882 2.58737 33 G - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 34 2.43343 2.42787 2.94285 0.25965 34 U - - - 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 35 1.79057 2.02501 1.84218 0.61125 35 U - - - 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 36 0.42922 2.54858 1.67243 2.48896 36 A - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 37 3.00603 0.29190 2.75594 1.96525 37 C - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 38 1.50778 1.98964 0.68042 1.99914 38 G - - < 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 39 2.43343 2.42787 2.94285 0.25965 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 40 2.15633 0.42934 2.52194 1.87725 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 41 0.29479 2.73932 2.29228 2.41168 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 42 2.02242 2.12963 2.37839 0.42147 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 43 2.14014 3.08737 0.26443 2.67221 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 44 2.61597 0.25441 3.18770 2.20491 44 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 45 2.21831 1.55301 1.91746 0.62995 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 46 2.23739 2.91870 0.25383 2.75772 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 47 2.70654 1.94383 2.35842 0.36311 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 48 2.80211 1.74924 2.50556 0.38012 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 49 3.19580 0.23826 2.87402 2.16631 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 50 2.71865 1.94489 2.36256 0.36118 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 51 0.43587 2.67304 1.59136 2.51817 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 52 3.20174 0.23761 2.87650 2.16745 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 53 3.20485 0.23727 2.87780 2.16805 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 54 0.43518 2.67549 1.59147 2.52137 54 A - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 55 2.61597 0.25441 3.18770 2.20491 55 C - - - 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 56 0.43656 2.67058 1.59126 2.51498 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 57 2.23865 2.92028 0.25338 2.75971 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 58 2.23871 2.92035 0.25336 2.75980 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 59 2.23877 2.92043 0.25334 2.75990 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 60 2.71480 1.94455 2.36124 0.36179 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 61 0.43649 2.67083 1.59127 2.51530 61 A - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 62 1.97529 2.70624 0.33590 2.52825 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 63 0.43651 2.67076 1.59127 2.51522 63 A - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 64 0.43657 2.67054 1.59126 2.51492 64 A - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 65 3.18752 0.23918 2.87055 2.16471 65 C - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 66 3.18317 0.23966 2.86872 2.16386 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 67 0.43768 2.66664 1.59109 2.50986 67 A - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 68 3.15838 0.24247 2.85820 2.15898 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 69 2.19189 2.86177 0.27048 2.68654 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.04619 3.79109 3.79109 1.46634 0.26236 1.09861 0.40547 70 1.77344 2.37105 0.46694 2.20774 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.06087 3.79109 3.31097 1.46634 0.26236 1.09861 0.40547 71 0.19696 3.02015 2.76603 2.70200 71 A - - : 1.38629 1.38629 1.38629 1.38629 0.07703 3.77708 2.97101 1.46634 0.26236 1.28544 0.32369 72 2.51026 0.28396 3.07843 2.12086 72 C - - : 1.38629 1.38629 1.38629 1.38629 0.09802 3.74831 2.66195 1.46634 0.26236 1.58009 0.23062 73 0.78238 2.06143 1.42488 1.74368 73 a - - : 1.38629 1.38629 1.38629 1.38629 0.06684 3.70095 3.22004 1.46634 0.26236 1.91969 0.15859 74 2.27156 3.08237 0.24746 2.65611 74 G - - : 1.38629 1.38629 1.38629 1.38629 0.05147 3.68558 3.68558 1.46634 0.26236 2.00638 0.14442 75 2.27156 3.08237 0.24746 2.65611 75 G - - : 1.38629 1.38629 1.38629 1.38629 0.14081 3.68558 2.24182 1.46634 0.26236 2.00638 0.14442 76 0.29467 2.66399 2.44551 2.31390 76 A - - : 1.38629 1.38629 1.38629 1.38629 0.05614 3.60091 3.60091 1.46634 0.26236 2.36772 0.09838 77 2.08756 2.14567 2.57529 0.38142 77 U - - : 1.38629 1.38629 1.38629 1.38629 0.05614 3.60091 3.60091 1.46634 0.26236 2.36772 0.09838 78 0.77624 2.19993 1.33434 1.79742 78 a - - : 1.38629 1.38629 1.38629 1.38629 0.05614 3.60091 3.60091 1.46634 0.26236 2.36772 0.09838 79 1.85158 0.72195 2.39238 1.32502 79 c - - : 1.38629 1.38629 1.38629 1.38629 0.02847 3.57324 * 1.46634 0.26236 0.00000 * //