# STOCKHOLM 1.0
#=GF ID mir-187
#=GF AC RF00674
#=GF DE mir-187 microRNA precursor family
#=GF AU Griffiths-Jones SR; 0000-0001-6043-807X
#=GF GA 58.0
#=GF NC 53.9
#=GF TC 58.9
#=GF SE Griffiths-Jones SR
#=GF SS Predicted; RNAalifold
#=GF TP Gene; miRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR MIPF; MIPF0000078;
#=GF DR SO; 0001244; pre_miRNA;
#=GF DR GO; 0016442; RISC complex;
#=GF DR GO; 0035195; miRNA-mediated post-transcriptional gene silencing;
#=GF RN [1]
#=GF RM 17604727
#=GF RT A mammalian microRNA expression atlas based on small RNA library
#=GF RT sequencing.
#=GF RA Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S,
#=GF RA Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V,
#=GF RA Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B,
#=GF RA Bissels U, Inman J, Phan Q, Chien M, Weir DB, Choksi R, De Vita G,
#=GF RA Frezzetti D, Trompeter HI, Hornung V, Teng G, Hartmann G, Palkovits M, Di
#=GF RA Lauro R, Wernet P, Macino G, Rogler CE, Nagle JW, Ju J, Papavasiliou FN,
#=GF RA Benzing T, Lichter P, Tam W, Brownstein MJ, Bosio A, Borkhardt A, Russo
#=GF RA JJ, Sander C, Zavolan M, Tuschl T
#=GF RL Cell. 2007;129:1401-1414.
#=GF RN [2]
#=GF RM 12624257
#=GF RT Vertebrate microRNA genes.
#=GF RA Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP
#=GF RL Science. 2003;299:1540.
#=GF RN [3]
#=GF RM 15937218
#=GF RT The developmental miRNA profiles of zebrafish as determined by small RNA
#=GF RT cloning.
#=GF RA Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John
#=GF RA B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T
#=GF RL Genes Dev. 2005;19:1288-1293.
#=GF RN [4]
#=GF RM 30423142
#=GF RT miRBase: from microRNA sequences to function.
#=GF RA Kozomara A, Birgaoanu M, Griffiths-Jones S
#=GF RL Nucleic Acids Res. 2019;47:D155.
#=GF WK Mir-187_microRNA_precursor_family
#=GF SQ 27

URS000075A0E2_9031/6-86   AUUGUGAGACCUCCGGCUACAACACAGGACAUGGGAGCUUUUCUGAA----CCCUCGUGUCUUGUGUUGCAGCCAGAGGGGCACA
URS000075E274_59729/1-70  ----------CUCCGGCUACAACACAGGACAUGGGAGCUUUUCUGAA----CCCUCGUGUCUUGUGUUGCAGCCAGAGGGGCAC-
URS000075BC2F_13616/1-81  AUUGUGAGACCUCUGGCUACAACACAGGACACGGGAGCUUUUCUGAA----CCCUCGUGUCUUGUGUUGCAGCCAGAGGGGCACA
URS000075EE3B_9258/1-79   --UGUGAGACCUCCGGCUACAACAGAGGACACAGGAGCUUUUCAGAA----CCCUCGUGUCUUGUGUUGCAGCCAGAGGAGCACA
URS000075B09F_8364/1-80   --UGGUAUACCUUUGGUUACAACACAGGACAUGGGAGCUUACUUGGAA---CCCUCGUGUCUUGUGUUGCAGCCAGUGGUGGCCA
URS00007E40EA_28377/1-79  --UGUGAGACCUUUGGCUACAACACAGAACAUGGGCGCUUUCUUGGA----CCCUCGUGUCUUGUGUUGCAGCCAGAGGGGCACA
URS00006FB978_10116/16-96 AAUGCGGAUCCUCAGGCUACAACACAGGACCCGGGCGCUGCUCUGAC----CCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCA
URS000075BCD6_10029/1-80  GAUGCGGGUCCUCAGGCUACAACACAGGACCCGGGCGCUCCUCUGAC----CCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGC-
URS000075CC81_10090/1-61  -----------UCAGGCUACAACACAGGACCCGGGCGCUGCUCUGAC----CCCUCGUGUCUUGUGUUGCAGCCGG---------
URS00005677F7_9593/21-101 AGUGUGAGACCUCGGGCUACAACACAGGACCCGGGCGCUGCUCUGAC----CCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCA
URS00005677F7_9597/21-101 AGUGUGAGACCUCGGGCUACAACACAGGACCCGGGCGCUGCUCUGAC----CCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCA
URS00005677F7_9606/21-101 AGUGUGAGACCUCGGGCUACAACACAGGACCCGGGCGCUGCUCUGAC----CCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCA
URS0000221FCC_9600/21-101 AGUGUGAGACCUCGGGCUACAACAUAGGACCCGGGCGCUGCUCUGAC----CCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCA
URS000001D1A1_9545/21-101 AGUGUGAGACCUCGGGCUACAACACAGGACCCGGGUGCUGCUCUGAC----CCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCA
URS000001D1A1_9544/21-101 AGUGUGAGACCUCGGGCUACAACACAGGACCCGGGUGCUGCUCUGAC----CCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCA
URS000075BB7A_9823/1-77   ----UGAGACCUCGGGCUACAACACGGGACUCGGGCGCUGCUCUGAC----CCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCA
URS000075E641_9913/21-101 GGUGUGAGACCUCGGGCUACAACACGGGACCCGGGCGCUGCUCCGAC----CCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCA
URS00007E4007_9925/21-101 GGUGUGAGACCUCGGGCUACAACACGGGACCCGGGCGCUGCUCCGAC----CCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCA
URS000075CF95_9796/1-61   -----------UCGGGCUACAACACGGGACCCGGGCGCUGCUCCGAC----CCCUCGUGUCUUGUGUUGCAGCCGG---------
URS00007E3DB8_9615/1-68   ----------CUCGGGCUACAACACGGGACCCGGGCGCUGCUCCGAC----CCCUCGUGUCUUGUGUUGCAGCCGGAGGGAC---
URS000075D993_7955/7-89   GUGGCUGGGCCAGGGGCUGCAACACAGGACAUGGGAGCUGUCUCUCACUCCCGCUCGUGUCUUGUGUUGCAGCCAGUGGAACG--
URS0000D4FDA4_7962/5-89   GUGGCUGGGCCAGGGGCUGCAACACAGGACAUGGGAGCUGCCUCUCACUCCCGCUCGUGUCUUGUGUUGCAGCCAGUGGAACUGC
URS0000D4FA9F_7998/1-63   --------------GGCUGCAACACAGGACAUGGGAGCUGUCUCUCACUCCCGCUCGUGUCUUGUGUUGCAGCCAGU--------
URS000075C244_8090/1-84   -UGGUUGGGCCAGCGGCUGCAACACAGGACAUGGGUCCUGCUUCUCCUCCCCGCUCGUGUCUUGUGUUGCAGCCAGUGGAGCUGC
URS0000D4FE16_8267/10-93  CUGGCCGGGCCAAGGGCUGCAACACAGGACAUGGGUCCUGCU-CUCCUCCCCGCUCGUGUCUUGUGUUGCAGCCAGUGGAGCUGC
URS000075CE72_31033/9-92  UUGGCCGGGCCAGGGGCUGCAACACAGGACAUGGGUCAUGCCUCUGCCCACCGCUCGUGUCUUGUGUUGCAGCCAGUGGAGCUG-
URS0000A89665_99883/1-65  --------------GGCUGCAACACAGGACAUGGGUCUUGCCUCUGCCCGCCGCUCGUGUCUUGUGUUGCAGCCAGUGG------
#=GC SS_cons              ::::::::::<<--<<<<-<<<<<<<<<<<-<<<<____________....__>>>>->>>>>>>>>>>->>>>-->>:::::::
#=GC RF                   auuGugaGaCCucgGGCUACAACACaGGACacGGGuGCUgcUcugac....CcCUCgUGUCUuGUGUUGCAGCCaGaGGgaCgcA
//
