# STOCKHOLM 1.0
#=GF ID mir-217
#=GF AC RF00673
#=GF DE mir-217 microRNA precursor family
#=GF AU Griffiths-Jones SR; 0000-0001-6043-807X
#=GF GA 70.0
#=GF NC 69.5
#=GF TC 70.1
#=GF SE Griffiths-Jones SR
#=GF SS Predicted; RNAalifold
#=GF TP Gene; miRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR MIPF; MIPF0000077;
#=GF DR SO; 0001244; pre_miRNA;
#=GF DR GO; 0016442; RISC complex;
#=GF DR GO; 0035195; miRNA-mediated post-transcriptional gene silencing;
#=GF RN [1]
#=GF RM 17604727
#=GF RT A mammalian microRNA expression atlas based on small RNA library
#=GF RT sequencing.
#=GF RA Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S,
#=GF RA Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V,
#=GF RA Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B,
#=GF RA Bissels U, Inman J, Phan Q, Chien M, Weir DB, Choksi R, De Vita G,
#=GF RA Frezzetti D, Trompeter HI, Hornung V, Teng G, Hartmann G, Palkovits M, Di
#=GF RA Lauro R, Wernet P, Macino G, Rogler CE, Nagle JW, Ju J, Papavasiliou FN,
#=GF RA Benzing T, Lichter P, Tam W, Brownstein MJ, Bosio A, Borkhardt A, Russo
#=GF RA JJ, Sander C, Zavolan M, Tuschl T
#=GF RL Cell. 2007;129:1401-1414.
#=GF RN [2]
#=GF RM 12624257
#=GF RT Vertebrate microRNA genes.
#=GF RA Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP
#=GF RL Science. 2003;299:1540.
#=GF RN [3]
#=GF RM 30423142
#=GF RT miRBase: from microRNA sequences to function.
#=GF RA Kozomara A, Birgaoanu M, Griffiths-Jones S
#=GF RL Nucleic Acids Res. 2019;47:D155.
#=GF WK MicroRNA
#=GF SQ 28

URS000075DE71_7955/6-98    AACUUUCUGAUGUUGGUGAUACUGCAUCAGGAACUGAUUGGAUGAUAUUCAGGAGCCAUCAGUUCCUGAUGCACUCCCAUCAGCAUCGAAAGA
URS0000D5416D_7998/1-59    -------------------UACUGCAUCAGGAACUGAUUGGAUGAUAUUCAGGAGCCAUCAGUUCCUGAUGCACUCCC---------------
URS0000D52A61_7962/6-98    AUCUUGCUGAUGUUGGUGAUACUGCAUCAGGAACUGAUUGGAUGAUAUCUAGGAGCCAUCAGUUCUUGAUGCACUCCCUUCAGCAUCGAAAGA
URS000075D0F9_31033/8-100  GCCUUCUUGAUGCGGAUGAUACUGCAUCAGGAACUGAUUGGCUGAUGCUUUUUACCCAACAGUACCUGAUGCAUUGCCUUCAGCAUUGAAAGA
URS0000A7994F_99883/1-89   ----UCUUGAUGUGGAUGAUACUGCAUCAGGAACUGAUUGGCUGAUGCUUAGUACCCAACAGUACCUGAUGCAUUGCCUUCAGCAUUGAAAGA
URS000075D32D_10090/15-107 CAGUUUUUGAUGUUGCAGAUACUGCAUCAGGAACUGACUGGAUAAGACUUAAUCCCCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACA
URS000075E622_10116/14-105 UAGUUUU-GAUGUCGCAGAUACUGCAUCAGGAACUGACUGGAUAAGACUCAGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACA
URS000075B278_9598/16-108  UAGUUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAGAAUCAGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACA
URS0000AAB71D_9600/16-108  UAGUUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAGAAUCAGCCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACA
URS0000060B2B_9597/16-108  UAGUUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAGAAUCAGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACA
URS0000060B2B_9593/16-108  UAGUUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAGAAUCAGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACA
URS0000060B2B_9606/16-108  UAGUUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAGAAUCAGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACA
URS000075C2BF_9823/13-105  GAGUUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAGAAUUGGUCACCAUCAGUUCUUAAUGCAUUGCCUUCAGCAUCUAAACA
URS0000D5615F_9823/1-78    ---------AUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAGAAUUGGUCACCAUCAGUUCUUAAUGCAUUGCCUUCAGCAUC------
URS000075B30A_9913/16-108  GAGUUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAGAAUCGGUCACCAUCAGUUCCUCAUGCAUUGCCUUCAGCAUCUAAACA
URS00007E39FD_9925/14-106  GAGAUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAGAAUCGGUCACCAUCAGUUCCUCAUGCAUUGCCUUCAGCAUCUAAACA
URS00007E4784_9615/1-82    ------UUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAGAAUGGGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCU-----
URS000075C508_9796/1-57    -------------------UACUGCAUCAGGAACUGAUUGGAUAAGAAUCAGUCACCAUCAGUUCCUAAUGCAUUG-----------------
URS000075A4C4_9031/13-105  GAGUUCUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAUAAUCAGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACA
URS00004269DB_59729/1-73   ---------AUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAUAAUCACUCACCAUCAGUUCCUAAUGCAUUGCCUUCA-----------
URS000075E13A_9258/8-100   GAGUUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAUAAUCAGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACA
URS0000D5312C_8665/2-94    GAAUUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAUAAUCAAACACCAUCAGUUCUUAAUGCAUUGCCUUCAGCAUCUAAACA
URS00007E3FAF_28377/1-87   ----UUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGGGAAUAAUCAUGUACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAA--
URS000075E178_13616/1-82   ------UUGAUGUCGUAGAUACUGCAUCAGGAACUGAUUGGAUAAUAUUCAGGCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCU-----
URS000075B9CC_8364/1-83    ------UUGAUGUUGUAGAUACUGCAUCAGGAACUGAUUGGAUCCCAGGGAGCAGCCAUCAGUUCCUAAUGCACUGCCUUCGGCAUCUA----
URS0000A857FE_7757/1-69    ----------UGUUGUGGAUACUGCAUCAGGAACUGAUUGGAUAGUGAUGGAUUGCCAUCAGUUCUUAAUGCAUUGUCU--------------
URS0000D54082_7739/1-68    ------------CUGGGACUACUGCAUCAGGAACUGAUUGGAUGGGAUACAA-AUCAAUCUGUUCCUCAUGCAUGGCUCAC------------
URS0000D5391B_7741/1-68    ------------CUGGGACUACUGCAUCAGGAACUGAUUGGAUGGGAAUCAA-AUCAAUCUGUUCCUCAUGCAUGGCUCAC------------
#=GC SS_cons               ::::::::::::::::::::::<<<<<-<<<<<<<<<-<<<______________>>>>>>>>>>>>->>>>>::::::::::::::::::::
#=GC RF                    uagUUuUUGAUGUuGcaGAUACUGCAUCAGGaACUGaUUGGAUaAuAaUcAguaaCCAuCAGUuCCUaAUGCAUUGCCUUCAGCAUCuAAAcA
//
