# STOCKHOLM 1.0
#=GF ID mir-138
#=GF AC RF00671
#=GF DE mir-138 microRNA precursor family
#=GF AU Griffiths-Jones SR; 0000-0001-6043-807X
#=GF GA 50.0
#=GF NC 49.1
#=GF TC 50.3
#=GF SE Griffiths-Jones SR
#=GF SS Predicted; RNAalifold
#=GF TP Gene; miRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR MIPF; MIPF0000075;
#=GF DR SO; 0001244; pre_miRNA;
#=GF DR GO; 0016442; RISC complex;
#=GF DR GO; 0035195; miRNA-mediated post-transcriptional gene silencing;
#=GF RN [1]
#=GF RM 17604727
#=GF RT A mammalian microRNA expression atlas based on small RNA library
#=GF RT sequencing.
#=GF RA Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S,
#=GF RA Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V,
#=GF RA Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B,
#=GF RA Bissels U, Inman J, Phan Q, Chien M, Weir DB, Choksi R, De Vita G,
#=GF RA Frezzetti D, Trompeter HI, Hornung V, Teng G, Hartmann G, Palkovits M, Di
#=GF RA Lauro R, Wernet P, Macino G, Rogler CE, Nagle JW, Ju J, Papavasiliou FN,
#=GF RA Benzing T, Lichter P, Tam W, Brownstein MJ, Bosio A, Borkhardt A, Russo
#=GF RA JJ, Sander C, Zavolan M, Tuschl T
#=GF RL Cell. 2007;129:1401-1414.
#=GF RN [2]
#=GF RM 17616659
#=GF RT Patterns of known and novel small RNAs in human cervical cancer.
#=GF RA Lui WO, Pourmand N, Patterson BK, Fire A
#=GF RL Cancer Res. 2007;67:6031-6043.
#=GF RN [3]
#=GF RM 30423142
#=GF RT miRBase: from microRNA sequences to function.
#=GF RA Kozomara A, Birgaoanu M, Griffiths-Jones S
#=GF RL Nucleic Acids Res. 2019;47:D155.
#=GF WK miR-138
#=GF SQ 44

URS000075E62C_10090/17-87 UGGGACAGCUGGUGUUGUGAAUCAGGCCGUU-------GCCAAUCAGAGAACGGCUACUUCACAACACCAGGGCCACA
URS000075A2CD_10116/17-87 UGGGACAGCUGGUGUUGUGAAUCAGGCCGUU-------GCCAAUCAGAGAACGGCUACUUCACAACACCAGGGUCUCA
URS000075BD79_9606/17-87  UGGGGCAGCUGGUGUUGUGAAUCAGGCCGUU-------GCCAAUCAGAGAACGGCUACUUCACAACACCAGGGCCACA
URS00007E3632_9823/5-75   UGGGGCAGCUGGUGUUGUGAAUCAGGCCGUU-------GCCAAUCAGAGAACGGCUACUUCACAACACCAGGGUCACA
URS0000D55152_29078/5-75  UGGGGCAGCUGGUGUUGUGAAUCAGGCCGUU-------GCCAAUCAGAGAACGGCUACUUCACAACACCAGGGUCACA
URS000075ED4A_9913/15-85  UGGGGCAGCUGGUGUUGUGAAUCAGGCCGUC-------GCCAAUCAGAGAACGGCUACUUCACAACACCAGGGUCACA
URS00007E4C2F_9615/1-62   ------AGCUGGUGUUGUGAAUCAGGCCGUU-------GCCAAUCAGAGAACGGCUACUUCACAACACCAGGGUC---
URS000075A559_10090/1-71  -----CAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGCGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUG--
URS0000D502CF_29078/5-82  UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGCGCUUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUGCA
URS000075E8DD_10029/4-80  UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGCGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUGC-
URS00007E34EF_9615/1-69   ------AGCUGGUGUUGUGAAUCAUGCCGACGAGCAGCGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUU---
URS000075C8C2_10116/3-80  UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGAGCAACGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUGCA
URS000075C0AC_9593/15-92  UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGCGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUGCA
URS0000709868_9913/3-80   UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGCGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUGCA
URS0000709868_9598/3-80   UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGCGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUGCA
URS000075A54D_9606/4-81   UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGCGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUGCA
URS000075A54D_9544/4-81   UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGCGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUGCA
URS000075A54D_9600/4-81   UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGCGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUGCA
URS000075EA22_9796/4-81   UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGUGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUGCA
URS000064EB57_13616/3-80  UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACAAGCAGCUCAUCCUAUUACCCGGCUAUUUCACUACACCAGGGUUGCA
URS000075A92D_9305/25-102 UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACAAGCAGCUCAUCCUAUUACCCGGCUAUUUCACCACACCAGGGUUGCA
URS000075EC43_9258/21-98  UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGCGAGUCCUAAUACCCGGCUAUUUCACUACACCAGGGUUGCA
URS00006B22B3_9031/3-80   UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGGCAAGCGCUUCCUACUAUCCGGCUAUUUCACUACACCAGGGUUGCA
URS000075C8AA_59729/5-82  UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGACAAGCGCUUCCUACAAUCCGGCUAUUUCACUACACCAGGGUUGCA
URS00007E3725_28377/15-92 UGCUGCAGCUGGUGUUGUGAAUCAGGCCGACAAAAAGCGCAUCUUACUAUCCGGCUAUUUCACUACACCAGGGUUGCA
URS0000D50BCB_8665/1-77   -GCUGCAGCUGGUGUUGUGAAUCAGGCCGACAAAAAGUGCGUCUUACUAUCCGGCUAUUUCACUACACCAGGGUCGCA
URS0000D55AD6_7998/1-68   ------AGCUGGUGUUGUGAAUCAGGCCGAUGUCACACGUCAGCGAUAACCCGGCUAUUUCACAACACCAGGGU----
URS0000D5234E_7962/9-86   UGCUGCAGCUGGUGUUGUGAAUCAGGCCGAUGUCACACGUCCGCGAUAACCCGGCUAUUUCACAACACCAGGGUGGCA
URS0000D54E40_8030/1-68   ------AGCUGGUGUUGUGAAUCAGGCCGAUGCCACACACCCGCUAUAACCCGGCUAUUUCACAACACCAGGGU----
URS0000D4F0DE_8030/1-68   ------AGCUGGUGUUGUGAAUCAGGCCGAUGCCACACACCUGCUAUAACCCGGCUAUUUCACAACACCAGGGU----
URS0000AA6BDB_99883/1-77  -GCUGCAGCUGGUGUUGUGAAUCAGGCCGAUGACAGACACCUCCUAGAAGCCGGCUAUUUCACAACACCAGGGUGGCA
URS000075A48E_8090/9-86   UGUUGCAGCUGGUGUUGUGAAUCAGGCCGAUGACACACACCUCCUAAAAGCCGGCUAUUUCACAACACCAGGGUGGCA
URS0000759CC4_31033/1-77  -GCUGCAGCUGGUGUUGUGAAUCAGGCCGAUGACAGACACCUCCUAUAAGCCGGCUAUUUCACAACACCAGGGUGGCA
URS0000A8C26B_7757/3-79   GGCGGCAGCUGGUGUUGUGAAUCAGGCCGGUGGCGCA-GCCCCUAGACACACGGCUGUUUCACUACAGCAGGGUCGCA
URS0000A79638_7998/1-62   ------AGCUGGUGUUGUGAAUCAGGCCGCCGUGGUGAA------AGGGUACGGCUUCUUCACAACACCAGGGU----
URS000075D92F_9031/16-86  UGCAGCAGCUGGUGUUGUGAAUCAGGCCG-U------CACCAGUCGGAGAACGGCUACUUCACAACACCAGGGUGGCA
URS000075B32D_59729/5-73  UGCAACAGCUGGUGUUGUGAAUCAGGCCG-U------CACCAGUCGGAGAACGGCUACUUCACAACACCAGGGUCG--
URS0000A93E9D_7757/9-80   UGCCGCAGCUGGUGUUGUGAAUCAGGCUGAU------CCUCUCCUGCUCCUCCGCCGCUUCACAGCACCGGCACGGCA
URS0000D4F205_8030/1-61   ------AGCUGGUGUUGUGAAUCAGGCCGCU------AUAGUGCCAGACA-CGGCUUCUUCCCAACACCAGGGU----
URS0000D54F38_8030/1-62   ------AGCUGGUGUUGUGAAUCAGGCCGCU------GUGGUGUUGAGAC-CGGCUACUUCCCAACACCAGGGUC---
URS0000D4F35F_8665/1-71   UGUAGCAGCUGGUGUUGUGAAUCAGGCCGUC-------AUCCAUUAGAGAACGGCUACUUCACAACACCAGGGUUGCU
URS000075B72F_8364/9-79   AGCAGCAGCUGGUGUUGUGAAUCAGGCCGUG-------ACCACUCAGAAAACGGCUACUUCACAACACCAGGGUUGCU
URS00007E484B_28377/14-84 UGUAGCAGCUGGUGUUGUGAAUCAGGCCGUU-------GCCAAAGAGAGAACGGCUACUUCACAACACCAGGGUUGCC
URS000075BFC4_9796/1-59   ------AGCUGGUGUUGUGAAUCAGGCCGUU-------GCCAAUCAGAGAACGGCUACUUCACAACACCAGG------
#=GC SS_cons              <<<-<<--<<<<<<<<<<<<<---<<<<<______________________>>>>>-->>>>>>>>>>>>>->>->>>
#=GC RF                   uGcugCAGCUGGUGUuGUGAAUCAgGCCGauGagaagcgccuccuauaacaCGGCuAuUUCACaACACCAGGGcugCa
//
