# STOCKHOLM 1.0
#=GF ID mir-184
#=GF AC RF00657
#=GF DE mir-184 microRNA precursor family
#=GF AU Daub J; 0000-0001-6022-563X
#=GF GA 54.1
#=GF NC 53.9
#=GF TC 54.2
#=GF SE Griffiths-Jones SR
#=GF SS Predicted; PFOLD
#=GF TP Gene; miRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR MIPF; MIPF0000059;
#=GF DR SO; 0001244; pre_miRNA;
#=GF DR GO; 0016442; RISC complex;
#=GF DR GO; 0035195; gene silencing by miRNA;
#=GF RN [1]
#=GF RM 17604727
#=GF RT A mammalian microRNA expression atlas based on small RNA library
#=GF RT sequencing.
#=GF RA Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S,
#=GF RA Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V,
#=GF RA Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B,
#=GF RA Bissels U, Inman J, Phan Q, Chien M, Weir DB, Choksi R, De Vita G,
#=GF RA Frezzetti D, Trompeter HI, Hornung V, Teng G, Hartmann G, Palkovits M, Di
#=GF RA Lauro R, Wernet P, Macino G, Rogler CE, Nagle JW, Ju J, Papavasiliou FN,
#=GF RA Benzing T, Lichter P, Tam W, Brownstein MJ, Bosio A, Borkhardt A, Russo
#=GF RA JJ, Sander C, Zavolan M, Tuschl T
#=GF RL Cell. 2007;129:1401-1414.
#=GF RN [2]
#=GF RM 15937218
#=GF RT The developmental miRNA profiles of zebrafish as determined by small RNA
#=GF RT cloning.
#=GF RA Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John
#=GF RA B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T
#=GF RL Genes Dev. 2005;19:1288-1293.
#=GF RN [3]
#=GF RM 30423142
#=GF RT miRBase: from microRNA sequences to function.
#=GF RA Kozomara A, Birgaoanu M, Griffiths-Jones S
#=GF RL Nucleic Acids Res. 2019;47:D155.
#=GF CC This family represents the microRNA (miRNA) precursor mir-184 imported
#=GF CC from miRBase [3].
#=GF WK Mir-184
#=GF SQ 66

URS000078C88A_7227/10-92   GUGCAUUCGUACCCUUAUCA-UUC-UCUCGCCCCGUGUGCA--------CUUAAAG--ACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACC
URS00000858E3_7220/4-86    GUGCAUUCGUACCCUUAUCA-UUC-UCUCGCCCCGUGUGCA--------UUUAAAG--ACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACC
URS00000858E3_7238/4-86    GUGCAUUCGUACCCUUAUCA-UUC-UCUCGCCCCGUGUGCA--------UUUAAAG--ACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACC
URS00000858E3_7240/4-86    GUGCAUUCGUACCCUUAUCA-UUC-UCUCGCCCCGUGUGCA--------UUUAAAG--ACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACC
URS00001CBD4B_7237/10-92   GUGCAUUCGUACCCUUAUCA-UUC-UCGCGCCCCGUGUGCA--------UUAAAAG--ACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACC
URS00002B9434_7234/4-86    GUGCAUUCGUACCCUUAUCA-UUC-UCGCGCCCCGUGUGCA--------UUAAAAG--ACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACC
URS000057D733_7217/4-86    GUGCAUUCGUACCCUUAUCA-UUC-UCGCGCCCCGUGUGCA--------UAAUGAG--ACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACC
URS00005F1864_7245/4-85    GUGCAUUCGUACCCUUAUCA-UUC-UCUCGCCCCGUGUGCA--------UUG-AAG--ACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACC
URS0000264A51_7230/8-90    GUGCAUUCGUACCCUUAUCA-UUC-UCGCGCCCCGUGUGCA--------UAUCUAU--ACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACC
URS000001FC0F_7244/8-90    GUGCAUUCGUACCCUUAUCA-UUC-UCGCGCCCCGUGUGCA--------UAUCUAG--ACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACC
URS000015F4A9_7260/4-86    GUGCAUUCGUACCCUUAUCA-UUC-UCGCGCCCCGUGUGCA--------UAUCUAG--ACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACC
URS00002AE0F1_7222/4-86    GUGCAUUCGUACCCUUAUCA-UUCUCUC-GCCCCGUGUGGA--------UAACUAU--ACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACC
URS000045C87B_7165/2-82    GUGCACUCGAACCCUUAUCA-UUCUUUC-GCCCCGUGUGCU--------UUCUAA----CAACUGGACGGAGAACUGAUAAGGGCCCGGGUCACC
URS0000D51A75_7159/4-86    GUGUAUUCGUACCCUUAUCA-UUCUUGC-GCCCCGUGUUAU--------AUUGUUG--GCGACUGGACGGAGAACUGAUAAGGGCCCGGGUCACC
URS0000D5643E_7176/1-83    GUGUAUUCGCACCCUUAUCA-UUCUUUC-GCCCCGUGUACU--------GUUGUUU--GCGACUGGACGGAGAACUGAUAAGGGCCCGGGUCACC
URS000075C307_7029/1-60    ------------CUUUAUCA-UUCUCUG-GUCUUGUGUGAA--------UUU-UAU--ACUACUGGACGGAGAACUGAUAAAGGA----------
URS0000D5520E_7130/11-91   ACUGUGUCGUGCCCUUGUCA-UUCUUCU-UGCCUGUGUGUG--------UUG--AU--ACAACUGGACGGAGAACUGAUAAGGGCAUGACCUUUA
URS000075C2B9_7091/3-83    GCAGUGACGUGCCCUUGUCA-UUCUUCA-GGCCC-UGUGUA--------UUU-ACA--ACUACUGGACGGAGAACUGAUAAGGGCACGCCGUGUA
URS000075C908_7029/1-65    ------------CCUUAUCA-UUCUUC--GCCUUGUGUGCA--------AUU-UAA--ACAACUGGACGGAGAACUGAUAAGGGCUGGUAU----
URS0000D5035F_34740/17-95  ACAUAUACACGCCCUUGUCA-UUCUUCU-UGCCCG---GUG--------UUU-AUC--ACUACUGGACGGAGAACUGAUAAGGGCAUGUGUUGUG
URS00007B01BF_283909/9-92  GAUCGCACGAUUCCUUACCAUUUC-UUU-GUCCGGUCCGUG--------UGAUUAUC-AUCACUGGACGGAGAACUGAUAAGGGCCUGUGACGAC
URS00007B39A9_283909/7-89  UACAUCACGUUCCCUUGUCACUUG-UUC-GUCCUGUUGGC---------UGCGUUUU-CUCACUGGACGGAGAACUGAUAGGGCCCUGUGUGGAU
URS000075AC1F_10090/1-69   -------CCUUUCCUUAUCACUUU-UCC-AGCC-AGCUUUG-----UGACUCUAAG----UGUUGGACGGAGAACUGAUAAGGGUAGG-------
URS000075B11B_10029/8-90   GCAAUCACGUUUCCUUAUCACUUU-UCC-AGCC-AGCUUUG-----UGACUCUAAG----UGUUGGACGGAGAACUGAUAAGGGUAGGUGAUUGG
URS000075CD11_9796/1-70    ------ACAUCUCCUUAUCACUUU-UCC-AGCC-AGCUUUG-----UGACUCUAAG----UGUUGGACGGAGAACUGAUAAGGGUAGG-------
URS000075B970_8364/1-83    CCAGUAUCACUUCCUUAUCACUUU-UCC-AGCC-CAGCUUU-----UCAUGACAAAC---UGUUGGACGGAGAACUGAUAAGGCUGUGUGACUG-
URS000075E6F9_8090/8-92    UCAAGCACAUCUCCUUAUCACUUU-UCC-AGCC-CAGCUAU-----C--UGACAAACGUUUGUUGGACGGAGAACUGAUAAGGGUAUGUGCCUGG
URS000075EB82_10116/1-77   -----CACUUUCCCUUAUCAGUUU-UCC-AGCC-AGCUUUG-----UGACUGUAAA----UGUUGGACGGAGAACUGAUAAGGGUAAGUGACUG-
URS000032015F_9598/1-84    CCAGUCACGUCCCCUUAUCACUUU-UCC-AGCCCAGCUUUG-----UGACUGUAAG----UGUUGGACGGAGAACUGAUAAGGGUAGGUGAUUGA
URS000032015F_9600/1-84    CCAGUCACGUCCCCUUAUCACUUU-UCC-AGCCCAGCUUUG-----UGACUGUAAG----UGUUGGACGGAGAACUGAUAAGGGUAGGUGAUUGA
URS000032015F_9606/1-84    CCAGUCACGUCCCCUUAUCACUUU-UCC-AGCCCAGCUUUG-----UGACUGUAAG----UGUUGGACGGAGAACUGAUAAGGGUAGGUGAUUGA
URS00005A9ED1_9545/1-84    UCAGUCACGUCCCCUUAUCACUUU-UCC-AGCCCAGCUUUA-----UGACUGUAAG----UGUUGGACGGAGAACUGAUAAGGGUAGGUGAUUGA
URS00005A9ED1_9544/1-84    UCAGUCACGUCCCCUUAUCACUUU-UCC-AGCCCAGCUUUA-----UGACUGUAAG----UGUUGGACGGAGAACUGAUAAGGGUAGGUGAUUGA
URS00007E48E7_9615/1-68    ----------CCCCUUAUCACUUU-UCC-AGCC-AGCUUUG-----UGACUCUAAG----UGUUGGACGGAGAACUGAUAAGGGUAGGUG-----
URS00006BFA26_9913/1-83    CCAGUCACAUCCCCUUAUCACUUU-UCC-AGCC-AGCUUUG-----UGACUCUAAC----UGUUGGACGGAGAACUGAUAAGGGUAGGUGAUUGA
URS00006BFA26_9925/1-83    CCAGUCACAUCCCCUUAUCACUUU-UCC-AGCC-AGCUUUG-----UGACUCUAAC----UGUUGGACGGAGAACUGAUAAGGGUAGGUGAUUGA
URS00006B8965_9823/1-83    CCAGUCACAUCCCCUUAUCACUUU-UCC-AGCC-AGCUUUG-----UGACUCUAAA----UGUUGGACGGAGAACUGAUAAGGGUAGGUGAUUGA
URS00006B1F9F_13616/1-84   CCAGUCACAUCCCCUUAUCACUUU-UCC-AGCCCAGCUUUC-----UAAUGCUAAU----UGUUGGACGGAGAACUGAUAAGGGUAGGUGAUUGA
URS000075AA62_9031/1-74    CCGCUCUCACCCCCUUAUCACUUU-UCC-AGCCCAGCUUCU-----UCGCUCUGAC----UGUUGGACGGAGAACUGAUAAGGGU----------
URS000075E185_59729/29-112 CCGCUCUCGUGCCCUUAUCACUUU-UCC-AGCCCAGCUUCU-----GCACUCUGAC----UGUUGGACGGAGAACUGAUAAGGGUGCGCGAGUGA
URS00007E3D90_246437/1-62  ------------CCUUAUCACUUU-UCC-AGCCCAGCUUUG-----UGACUCUGAG----UGUUGGACGGAGAACUGAUAAGGGU----------
URS000075CA22_9258/27-110  CCCAUCACGUCUCUUUAUCACUUU-UCC-AGCCCAGCUUUC-----UGGUUCUAGC----CGUUGGACGGAGAAUUGAUAAGGGUACGGGGUCGG
URS0000D4F8F3_28377/7-89   CCGCUCACGUCCCCUUAUCACUUU-UCC-AGCC-AGCUUUC-----UUGUCAUAAC----CGUUGGACGGAGAACUGAUAAGGGUUUGUGGGUGA
URS000075CB28_7955/2-86    UCGAACACGUCUCCUUAUCACUUU-UCC-AGCCCAGCUAUC-----CAUUUAGUAUU---CGUUGGACGGAGAACUGAUAAGGGCAUGUGCCCGA
URS0000D54882_7962/20-104  UCGACCACAUCUCCUUAUCACUUU-UCC-AGCCCAGCUAUC-----CAUUUAGUAUC---CGUUGGACGGAGAACUGAUAAGGGCAUGUGCCCGA
URS0000D4F065_7998/1-63    ------------CCUUAUCACUUU-UCC-AGCCCAGCUAUC-----CAUUUAGUAUU---CGUUGGACGGAGAACUGAUAAGGGC----------
URS000075D34E_7955/1-79    -----CACAUCUCCUUAUCACUUU-UCC-AGCCCAGCUAAC-----GAUGGUGAAUC---CGUUGGACGGAGAACUGAUAAGGGCAUGUGGCUG-
URS000075C9AD_31033/1-73   -CGCUCACAUCUCCUUAUCACUUU-UCC-AGCCCAGCUAUA-----GGUUUUGAAUC---CGUUGGACGGAGAACUGAUAAGGG-----------
URS0000AA223A_99883/1-73   -CGCUCACAUCUCCUUAUCACUUU-UCC-AGCCCAGCUAUA-----GCUUCUGAAUC---CGUUGGACGGAGAACUGAUAAGGG-----------
URS000075BF0C_8090/7-91    UCACUCACAUCUCCUUAUCACUUU-UCC-AGCCCAGCUAUG-----UGGUCUGUAUU---CGUUGGACGGAGAACUGAUAAGGGCAUGUGCAUGA
URS000075E13F_7425/4-87    GUGCCUAAAGCCCCUUAUCA-UUC-UCC-UGUCGAGUGUUAA-----AAUUCUCUACGA---CUGGACGGAGAACUGAUAAGGGCCCGAGGGUUA
URS0000D5289C_7426/2-85    GUGCCUAAAGCCCCUUAUCA-UUC-UCC-UGUCGAGUGUUAA-----AAUUCUCUACGA---CUGGACGGAGAACUGAUAAGGGCCCGAGGGUUA
URS0000D5289C_7427/2-85    GUGCCUAAAGCCCCUUAUCA-UUC-UCC-UGUCGAGUGUUAA-----AAUUCUCUACGA---CUGGACGGAGAACUGAUAAGGGCCCGAGGGUUA
URS000075DB0D_7460/4-87    GUGCCCAAAGCCCCUUAUCA-UUC-UCC-UGUCCGGUGUAGA-----AUUGUUAGACGA---CUGGACGGAGAACUGAUAAGGGCCCGAGGGUCA
URS000075AEBA_7070/3-79    -UUCUUCCAGUCCCUUGUCA-UUC-UCU-CGCCCGGUG--------UAUUUUAACAA-----CUGGACGGAGAACUGAUAAGGGCUUGUGGGAA-
URS000075D49D_10224/14-92  -UUUCCUCAACUCCUUAUCA-UUC--CCGCGUCCAGCC--------CGACAUGGGAAG----CUGGACGGAGAACUGAUAAGGGCUUGUGGUUUA
URS0000D4F396_46514/17-100 GUUUCCUUUACUCCUUAUCG-UUC--CCGCGCCCAGCUGCCA----UGUUUGAAUAAUG---CUGGACGGAGAACUGAUAAGGGCUUAUGGGA-A
URS0000D54434_32264/8-95   GUUCCUUCAUCUCCUUAUCAUUUC--CGCUGUCCAGACAGAU----UAAUGUUAAAAUGAC-CUGGACGGAGAACUGAUAAGGGCAAGCAGGGAC
URS00007B4217_7668/3-93    CUUUUAUCU-UUCCUUAUCA-UUC-UCU-UGCCCGGCCGAAUACUAUGUUAUUGAAAUUGCGCUGGACGGAGAACUGAUAAGGGCUUAUAUAAGA
URS0000D51F03_7654/3-93    CUUUUAUCU-UUCCUUAUCA-UUC-UCC-UGCCCGGCCGAGUAAUCUUUUAUUGAAAUUGCGCUGGACGGAGAACUGAUAAGGGCUUAUAUAAGA
URS0000A864B6_7757/1-84    -UCGCCGCCCUCCCUUAUCACUCU-UCU-GCUCCAGCCC-------UGAGGUUUUAAUUCCGCUGGACGGAGGACUGAUAAGUGUGGGCGGGGU-
URS0000D53805_7739/8-92    UUCUGCACGCUCCCUUAUCACUUC-UUC-CGCCGAGCU--------CGUGUCUCUGAGUCAGCUGGACGGAGAACUGAUAAGGGCCCGUGCCGAA
URS0000D548A7_7741/8-92    UUCCGCACGCUCCCUUAUCACUUC-UUC-CGCCGAGCU--------CGUGUCUCUGAGUCAGCUGGACGGAGAACUGAUAAGGGCCUGUGCCGAA
URS0000D559E1_6945/10-92   GUUUCCACGUUUCCUUAUCA-UUCGACU-GUCCAGACUGC------UGUUUUGGAGAC----CUGGACGGAGAACUGAUAAGGGCUUGUGGUUGC
URS0000D55FF9_225164/13-92 UCUUUCACGUUUCCUUGUCACUUG-UUC-GUCUCGUCU---------AAUAUAAAGA----ACUGGACGGAGAACUGAUAAGGGCUUGUGGGUGA
URS000075BC4C_7719/9-97    GAACUUGCCACUUCUUCGCU-UUCCAUC-AUUUUGGGGUUAA----AUCACCCAAGCCAUUGAUGGACGGAGAACUGAUAAGGGCUCUUGCGUUG
#=GC SS_cons               :::::::::::<<<<<<<<<-<<<.<<<.--<<________.....__________..______>>-->>>>>>->>>>>>>>>:::::::::::
#=GC RF                    guacucaCguccCCUUAUCACUUc.UCc.agCCcagcUuua.....ugauuuuaAa..acugcUGGACgGAgAACUGAUAAGGgCuuGUGuuuua
//
