INFERNAL1/a [1.1.4 | Dec 2020] NAME mir-28 ACC RF00655 DESC microRNA mir-28 STATES 238 NODES 46 CLEN 78 W 91 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 18 11:43:58 2023 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates_18072023/RF00655/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 34 EFFN 1.282471 CKSUM 2795603322 NULL 0.000 0.000 0.000 0.000 GA 64.00 TC 64.40 NC 63.20 EFP7GF -7.7114 0.71919 ECMLC 0.61778 -5.30079 3.66287 1600000 304873 0.003936 ECMGC 0.44428 -15.09876 -1.40910 1600000 175163 0.002284 ECMLI 0.58820 -4.40746 4.72749 1600000 258654 0.004639 ECMGI 0.45280 -10.29623 2.01473 1600000 105442 0.003794 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 91 110 -9.003 -8.942 -0.043 -7.718 -7.998 -5.901 IL 1 1 2 1 6 1 1 93 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 1 93 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 80 C G - - MP 3 2 3 7 6 2 5 91 110 -8.983 -8.922 -0.023 -7.698 -7.978 -8.373 -3.928 -3.766 -3.716 -0.067 -2.589 -4.206 3.298 -3.333 -3.751 0.291 -4.072 -1.707 0.978 -4.034 -0.288 -2.615 ML 4 2 3 7 6 1 1 90 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 1 90 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 0 87 106 -9.332 -8.030 -3.827 -4.509 -4.527 -0.257 IL 7 7 5 7 6 1 1 91 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 1 91 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 79 c g - - MP 9 8 6 13 6 2 4 89 108 -8.983 -8.922 -0.023 -7.698 -7.978 -8.373 -3.337 -3.275 -3.233 0.344 -2.260 -3.802 2.619 -2.952 -3.264 0.640 -3.653 -1.338 1.348 -3.482 1.524 -2.169 ML 10 8 6 13 6 1 1 88 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 1 88 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 0 85 104 -9.332 -8.030 -3.827 -4.509 -4.527 -0.257 IL 13 13 5 13 6 1 1 89 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 1 89 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 78 u a - - MP 15 14 6 19 6 2 4 87 106 -8.983 -8.922 -0.023 -7.698 -7.978 -8.373 -3.594 -3.385 -3.493 0.270 -2.575 -4.107 1.735 -3.223 -3.506 0.643 -3.906 -1.298 2.934 -3.762 -0.267 -2.381 ML 16 14 6 19 6 1 1 86 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 1 86 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 83 102 -9.332 -8.030 -3.827 -4.509 -4.527 -0.257 IL 19 19 5 19 6 1 1 87 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 1 87 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 77 G C - - MP 21 20 6 25 6 2 4 85 104 -8.983 -8.922 -0.023 -7.698 -7.978 -8.373 -3.554 -1.170 -3.606 0.918 -3.952 -4.119 0.370 -3.942 -3.555 3.231 -3.966 -0.255 0.072 -3.550 -1.556 -2.579 ML 22 20 6 25 6 1 1 84 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 1 84 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 81 100 -9.332 -8.030 -3.827 -4.509 -4.527 -0.257 IL 25 25 5 25 6 1 1 85 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 1 85 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 76 c g - - MP 27 26 6 31 6 2 4 83 102 -8.983 -8.922 -0.023 -7.698 -7.978 -8.373 -3.102 -3.141 -3.079 0.350 0.620 -3.719 2.782 -2.924 -3.117 0.527 -3.550 -1.339 1.275 -3.306 -0.054 -2.087 ML 28 26 6 31 6 1 1 82 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 1 82 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 79 98 -9.332 -8.030 -3.827 -4.509 -3.312 -0.359 IL 31 31 5 31 6 1 1 83 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 1 83 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 75 C G - - MP 33 32 6 37 6 2 4 81 100 -8.983 -8.922 -0.023 -7.698 -7.978 -8.373 -3.928 -3.766 -3.716 -0.067 -2.589 -4.206 3.298 -3.333 -3.751 0.291 -4.072 -1.707 0.978 -4.034 -0.288 -2.615 ML 34 32 6 37 6 1 1 80 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 1 80 98 -7.055 -5.784 -1.692 -5.762 -0.779 -3.975 0.359 -0.536 0.111 -0.078 D 36 32 6 37 6 0 0 77 96 -9.247 -7.945 -3.742 -4.424 -4.442 -0.274 IL 37 37 5 37 6 1 1 81 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 1 81 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 7 74 C G - - MP 39 38 6 43 6 2 3 79 98 -8.983 -8.922 -0.023 -7.698 -7.978 -8.373 -3.767 -3.657 -3.580 0.035 -2.474 -4.080 3.195 -3.214 -3.618 0.372 -3.955 -1.650 1.116 -3.869 0.087 -2.485 ML 40 38 6 43 6 1 1 78 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 78 96 -7.055 -5.784 -1.495 -5.762 -0.896 -3.975 0.359 -0.536 0.111 -0.078 D 42 38 6 43 6 0 0 76 94 -9.247 -7.945 -3.742 -4.424 -2.522 -0.517 IL 43 43 5 43 6 1 1 79 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 79 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 8 73 u a - - MP 45 44 6 49 6 2 3 77 96 -8.989 -8.928 -0.023 -7.705 -7.985 -8.380 -3.191 -3.057 -3.233 0.477 -2.640 -3.982 1.568 -3.178 -2.370 0.830 -3.734 -1.084 2.884 -3.421 -0.391 -2.187 ML 46 44 6 49 6 1 1 76 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 76 94 -7.125 -5.854 -1.763 -5.833 -0.730 -4.046 0.671 -0.593 -0.297 -0.104 D 48 44 6 49 6 0 0 74 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 77 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 77 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 9 72 C G - - MP 51 50 6 55 6 2 3 75 94 -8.989 -8.928 -0.023 -7.705 -7.985 -8.380 -3.959 -3.802 -3.743 -0.098 -2.607 -4.229 3.314 -3.355 -3.778 0.252 -4.096 -1.743 0.958 -4.063 -0.306 -2.641 ML 52 50 6 55 6 1 1 74 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 74 92 -7.125 -5.854 -1.374 -5.833 -0.966 -4.046 0.283 -0.600 0.265 -0.118 D 54 50 6 55 6 0 0 72 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 75 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 75 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 10 71 g c - - MP 57 56 6 61 6 2 2 73 92 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -2.367 -2.071 0.909 1.282 -2.566 -3.429 1.163 -2.771 -2.536 1.672 -3.078 1.063 0.906 -2.693 -0.545 -1.598 ML 58 56 6 61 6 1 1 72 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 72 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 70 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 73 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 73 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 11 70 a u - - MP 63 62 6 67 6 2 2 71 90 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -3.389 -2.531 -3.431 2.983 -3.573 -4.608 0.705 -3.494 -3.345 1.519 -3.871 -0.082 0.283 -3.861 -1.240 -2.294 ML 64 62 6 67 6 1 1 70 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 70 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 68 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 71 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 71 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 12 69 G C - - MP 69 68 6 73 6 2 2 69 88 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -4.221 -2.849 -4.286 0.535 -4.499 -4.478 0.013 -4.481 -3.967 3.483 -4.344 -0.535 -0.390 -4.121 -2.000 -3.172 ML 70 68 6 73 6 1 1 68 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 68 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 66 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 69 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 69 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 13 68 G C - - MP 75 74 6 79 6 2 2 67 86 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -3.637 -2.620 -3.685 0.799 -3.874 -4.132 0.458 -3.975 -3.618 3.276 -2.623 -0.388 0.115 -3.603 -1.488 -2.661 ML 76 74 6 79 6 1 1 66 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 66 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 63 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 67 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 67 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 14 67 a u - - MP 81 80 6 85 6 2 2 65 84 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -3.389 -2.531 -3.431 2.983 -3.573 -4.608 0.705 -3.494 -3.345 1.519 -3.871 -0.082 0.283 -3.861 -1.240 -2.294 ML 82 80 6 85 6 1 1 64 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 64 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 61 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 65 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 65 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 15 66 G C - - MP 87 86 6 91 6 2 2 63 82 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -4.221 -2.849 -4.286 0.535 -4.499 -4.478 0.013 -4.481 -3.967 3.483 -4.344 -0.535 -0.390 -4.121 -2.000 -3.172 ML 88 86 6 91 6 1 1 62 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 62 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 59 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 63 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 63 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 16 65 C G - - MP 93 92 6 97 6 2 2 61 80 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -4.026 -3.877 -3.799 -0.165 -2.645 -4.277 3.348 -3.400 -3.836 0.169 -4.148 -1.819 0.915 -4.126 -0.344 -2.695 ML 94 92 6 97 6 1 1 60 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 60 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 61 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 61 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 17 64 u a - - MP 99 98 6 103 6 2 2 59 78 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -3.424 -3.333 -3.357 0.301 -2.462 -3.977 1.833 -3.121 -3.383 0.626 -3.799 -1.356 2.779 -3.586 0.376 -2.276 ML 100 98 6 103 6 1 1 58 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 58 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 59 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 59 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 18 63 c g - - MP 105 104 6 109 6 2 2 57 76 -9.003 -8.942 -0.112 -3.965 -7.998 -8.393 -3.140 -3.185 -3.108 0.309 0.848 -3.738 2.756 -2.937 -3.147 0.477 -3.574 -1.387 1.262 -3.340 -0.057 -2.113 ML 106 104 6 109 6 1 1 56 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 56 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 54 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 57 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 57 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 19 62 a u - - MP 111 110 6 115 6 2 2 55 74 -8.914 -8.854 -0.024 -7.630 -7.910 -8.305 -1.624 -2.218 -2.754 2.310 -2.755 -3.657 1.255 -2.957 -2.788 1.779 -3.303 -0.091 0.934 -2.939 -0.591 -1.784 ML 112 110 6 115 6 1 1 54 73 -7.043 -7.389 -0.609 -1.798 -7.239 -4.769 1.199 -1.100 -0.844 -0.555 MR 113 110 6 115 6 1 1 54 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 55 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 55 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 20 61 C G - - MP 117 116 6 121 6 2 2 53 72 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -4.026 -3.877 -3.799 -0.165 -2.645 -4.277 3.348 -3.400 -3.836 0.169 -4.148 -1.819 0.915 -4.126 -0.344 -2.695 ML 118 116 6 121 6 1 1 52 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 52 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 53 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 53 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 21 60 a u - - MP 123 122 6 127 6 2 2 51 70 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -3.389 -2.531 -3.431 2.983 -3.573 -4.608 0.705 -3.494 -3.345 1.519 -3.871 -0.082 0.283 -3.861 -1.240 -2.294 ML 124 122 6 127 6 1 1 50 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 50 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 51 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 22 59 g c - - MP 129 128 6 133 6 2 2 49 68 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -3.356 -2.332 -3.436 1.177 -3.856 -4.291 0.493 -3.670 -3.346 2.742 -3.813 1.628 0.193 -3.602 -1.447 -2.321 ML 130 128 6 133 6 1 1 48 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 48 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 49 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 23 58 U A - - MP 135 134 6 139 6 2 2 47 66 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -3.680 -3.478 -3.570 0.185 -2.631 -4.178 1.683 -3.287 -3.582 0.535 -3.979 -1.391 3.009 -3.846 -0.320 -2.450 ML 136 134 6 139 6 1 1 46 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 46 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 47 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 24 57 C G - - MP 141 140 6 145 6 2 2 45 64 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -4.026 -3.877 -3.799 -0.165 -2.645 -4.277 3.348 -3.400 -3.836 0.169 -4.148 -1.819 0.915 -4.126 -0.344 -2.695 ML 142 140 6 145 6 1 1 44 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 44 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 45 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 25 56 U A - - MP 147 146 6 151 6 2 2 43 62 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -3.680 -3.478 -3.570 0.185 -2.631 -4.178 1.683 -3.287 -3.582 0.535 -3.979 -1.391 3.009 -3.846 -0.320 -2.450 ML 148 146 6 151 6 1 1 42 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 42 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 43 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 26 55 a u - - MP 153 152 6 157 6 2 2 41 60 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -3.389 -2.531 -3.431 2.983 -3.573 -4.608 0.705 -3.494 -3.345 1.519 -3.871 -0.082 0.283 -3.861 -1.240 -2.294 ML 154 152 6 157 6 1 1 40 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 40 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 41 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 27 54 g c - - MP 159 158 6 163 6 2 2 39 58 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -2.649 -2.238 -2.754 1.081 -2.762 -3.483 1.133 -3.036 -2.813 2.496 -3.295 -0.252 0.825 0.487 -0.651 -1.851 ML 160 158 6 163 6 1 1 38 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 38 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 39 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 28 53 U A - - MP 165 164 6 169 6 2 2 37 56 -9.003 -8.942 -0.023 -7.718 -7.998 -8.393 -3.680 -3.478 -3.570 0.185 -2.631 -4.178 1.683 -3.287 -3.582 0.535 -3.979 -1.391 3.009 -3.846 -0.320 -2.450 ML 166 164 6 169 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 36 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 34 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 37 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 29 52 g c - - MP 171 170 6 175 4 2 2 35 54 -6.598 -7.843 -0.098 -4.297 -3.418 -2.439 -3.462 1.746 -3.743 -4.238 0.643 -3.701 -3.427 2.905 -3.883 -0.090 0.311 -3.567 -1.323 -2.370 ML 172 170 6 175 4 1 1 35 53 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 4 1 1 34 53 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 174 170 6 175 4 0 0 32 51 -12.737 -14.007 -2.036 -0.404 IL 175 175 5 175 4 1 1 35 53 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 176 176 6 176 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 51 - C - - MR 177 176 6 179 3 1 1 33 52 -8.104 -0.022 -6.422 -0.971 1.297 -1.762 -0.438 D 178 176 6 179 3 0 0 32 50 -6.390 -1.568 -0.620 IR 179 179 3 179 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 50 - C - - MR 180 179 3 182 3 1 1 32 51 -8.104 -0.022 -6.422 -1.113 1.399 -1.907 -0.658 D 181 179 3 182 3 0 0 31 49 -6.390 -1.568 -0.620 IR 182 182 3 182 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 49 - u - - MR 183 182 3 185 3 1 1 31 50 -8.104 -0.088 -4.167 -0.502 0.222 -1.246 0.770 D 184 182 3 185 3 0 0 30 48 -6.390 -1.568 -0.620 IR 185 185 3 185 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 48 - u - - MR 186 185 3 188 5 1 1 30 49 -6.801 -0.207 -6.617 -6.829 -3.240 -0.449 0.218 -1.187 0.736 D 187 185 3 188 5 0 0 29 48 -5.582 -0.937 -3.208 -4.639 -1.697 IR 188 188 3 188 5 1 1 31 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 30 47 a u - - MP 189 188 3 193 6 2 2 29 48 -8.914 -8.854 -0.024 -7.630 -7.910 -8.305 -3.134 -2.355 -3.184 2.568 -3.179 -4.219 1.095 -3.245 -3.112 1.834 -3.621 0.036 0.661 -3.522 -0.858 -2.066 ML 190 188 3 193 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 3 193 6 1 1 28 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 3 193 6 0 0 25 43 -10.000 -8.698 -4.495 -5.178 -5.195 -0.156 IL 193 193 5 193 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 29 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 31 46 g c - - MP 195 194 6 199 6 2 2 27 46 -8.914 -8.854 -0.024 -7.630 -7.910 -8.305 -3.365 -2.384 -3.437 1.115 -3.674 -4.139 0.683 -3.656 -3.343 3.000 -3.799 0.574 0.355 -3.516 -1.280 -2.347 ML 196 194 6 199 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 6 1 1 26 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 6 199 6 0 0 23 42 -10.000 -8.698 -4.495 -5.178 -5.195 -0.156 IL 199 199 5 199 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 27 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 32 45 u a - - MP 201 200 6 205 6 2 2 25 44 -8.914 -8.854 -0.024 -7.630 -7.910 -8.305 -3.099 -2.879 -3.102 0.697 -2.457 -3.818 1.803 -3.007 -3.128 1.121 -3.584 -0.837 2.555 -3.299 -0.178 -1.517 ML 202 200 6 205 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 22 40 -10.000 -8.698 -4.495 -5.178 -5.195 -0.156 IL 205 205 5 205 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 25 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 33 44 c g - - MP 207 206 6 211 6 2 2 23 42 -8.914 -8.854 -0.046 -7.630 -7.910 -5.780 -3.166 -3.040 -3.071 0.529 -2.171 -3.654 2.083 -2.835 -3.110 0.911 -3.500 -1.079 1.495 -3.319 1.928 -2.028 ML 208 206 6 211 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 210 206 6 211 6 0 0 21 40 -10.000 -8.698 -4.495 -5.178 -5.195 -0.156 IL 211 211 5 211 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 1 23 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 34 43 g c - - MP 213 212 6 217 4 2 2 21 40 -6.298 -6.505 -0.084 -4.919 -2.926 -2.094 -3.031 1.746 -3.253 -4.051 0.987 -3.187 -2.938 2.138 -3.448 1.488 0.662 -3.306 -0.938 -1.919 ML 214 212 6 217 4 1 1 21 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 215 212 6 217 4 1 1 21 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 216 212 6 217 4 0 0 21 40 -0.890 -5.307 -3.322 -1.577 IL 217 217 5 217 4 1 1 22 41 -2.520 -0.868 -1.952 -5.689 0.000 0.000 0.000 0.000 IR 218 218 6 218 3 1 1 21 40 -1.913 -0.528 -4.613 0.000 0.000 0.000 0.000 [ MATL 39 ] 36 - c - - - ML 219 218 6 221 3 1 1 19 38 -7.695 -0.025 -6.349 -0.217 0.333 -0.033 -0.148 D 220 218 6 221 3 0 0 18 37 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 37 - u - - - ML 222 221 3 224 3 1 1 18 36 -7.695 -0.025 -6.349 -0.507 0.477 -1.263 0.573 D 223 221 3 224 3 0 0 17 36 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 38 - u - - - ML 225 224 3 227 3 1 1 16 35 -7.695 -0.025 -6.349 -0.507 0.160 -1.248 0.814 D 226 224 3 227 3 0 0 16 34 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 39 - U - - - ML 228 227 3 230 3 1 1 15 33 -7.695 -0.025 -6.349 -1.007 -1.092 -1.710 1.448 D 229 227 3 230 3 0 0 15 33 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 40 - u - - - ML 231 230 3 233 3 1 1 13 32 -7.695 -0.025 -6.349 -0.501 0.227 -1.246 0.767 D 232 230 3 233 3 0 0 13 32 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 41 - c - - - ML 234 233 3 236 2 1 1 1 1 * 0.000 0.237 0.440 -0.886 -0.114 D 235 233 3 236 2 0 0 0 0 * 0.000 IL 236 236 3 236 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 237 236 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME mir-28 ACC RF00655 DESC microRNA mir-28 LENG 78 MAXL 166 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 18 11:43:59 2023 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED NSEQ 34 EFFN 2.677002 CKSUM 2795603322 STATS LOCAL MSV -8.7152 0.71919 STATS LOCAL VITERBI -9.4316 0.71919 STATS LOCAL FORWARD -3.3197 0.71919 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.59318 1.29339 1.33242 1.35268 1.38629 1.38629 1.38629 1.38629 0.09602 3.89728 2.64143 1.46634 0.26236 0.00000 * 1 3.28345 0.22549 3.04048 2.14933 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.04372 3.84497 3.84497 1.46634 0.26236 1.70671 0.20023 2 2.73259 0.78509 2.50815 0.92268 2 c - - < 1.38629 1.38629 1.38629 1.38629 0.04372 3.84497 3.84497 1.46634 0.26236 1.70671 0.20023 3 3.02312 1.93907 2.77561 0.29410 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04372 3.84497 3.84497 1.46634 0.26236 1.70671 0.20023 4 2.00751 2.91415 0.28798 2.78632 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04372 3.84497 3.84497 1.46634 0.26236 1.70671 0.20023 5 2.69481 0.40437 2.51361 1.69241 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04372 3.84497 3.84497 1.46634 0.26236 1.70671 0.20023 6 3.23536 0.23042 3.01754 2.14102 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.04372 3.84497 3.84497 1.46634 0.26236 1.70671 0.20023 7 3.00115 0.32721 2.77608 1.78943 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.04372 3.84497 3.84497 1.46634 0.26236 1.11923 0.39532 8 2.88273 2.16489 2.56121 0.28496 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04296 3.86192 3.86192 1.46634 0.26236 1.54997 0.23858 9 3.27032 0.22205 3.05867 2.16999 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.04296 3.86192 3.86192 1.46634 0.26236 0.55253 0.85683 10 0.84969 2.44398 0.95494 2.29462 10 a - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 11 0.28365 2.96276 1.97016 2.88497 11 A - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 12 2.68174 3.39176 0.14846 3.32778 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 13 2.39267 2.96695 0.22268 2.86853 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 14 0.28362 2.96290 1.97019 2.88517 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 15 2.68186 3.39191 0.14844 3.32800 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 16 3.34768 0.20529 3.14579 2.23127 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 17 2.80104 1.70939 2.57238 0.38284 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 18 2.79842 0.36689 2.62303 1.75087 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 19 0.66797 2.08302 1.51672 1.94302 19 A - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 20 3.21240 0.21894 3.07582 2.20531 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 21 0.28872 2.93910 1.96512 2.85209 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 22 1.99715 2.80598 0.31067 2.64686 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 23 3.12734 2.03716 2.90876 0.25978 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 24 3.33672 0.20632 3.14030 2.22927 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 25 3.13785 2.03793 2.91372 0.25870 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 26 0.28389 2.96159 1.96992 2.88335 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 27 2.03891 2.25261 0.73600 1.25289 27 g - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 28 3.14145 2.03819 2.91542 0.25834 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 29 1.34059 2.61359 0.54154 2.48670 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.29807 3.89728 1.43779 1.46634 0.26236 1.09861 0.40547 30 0.53963 2.33343 1.52594 2.27634 30 A - - < 1.38629 1.38629 1.38629 1.38629 0.05325 3.65246 3.65246 1.46634 0.26236 2.61731 0.07580 31 1.97708 2.53510 0.36703 2.41372 31 G - - < 1.38629 1.38629 1.38629 1.38629 0.05325 3.65246 3.65246 1.46634 0.26236 2.61731 0.07580 32 2.39142 1.70050 2.10785 0.50350 32 U - - < 1.38629 1.38629 1.38629 1.38629 0.05325 3.65246 3.65246 1.46634 0.26236 2.61731 0.07580 33 2.53398 1.38564 2.28831 0.56378 33 U - - < 1.38629 1.38629 1.38629 1.38629 0.05325 3.65246 3.65246 1.46634 0.26236 0.15782 1.92416 34 1.32725 2.27267 0.66542 2.13961 34 G - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 35 1.77166 0.97430 1.30856 1.70218 36 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 36 2.04188 0.88955 2.60715 0.95288 37 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 37 2.03686 1.18215 2.58235 0.71878 38 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 38 2.75715 2.69630 3.28008 0.18459 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 39 2.02992 1.11762 2.57941 0.76405 40 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 40 1.23801 0.90232 2.20048 1.64166 41 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 41 2.35343 1.42122 2.08112 0.61851 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.29807 3.89728 1.43779 1.46634 0.26236 1.09861 0.40547 42 1.72856 2.45087 0.45200 2.30374 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.05325 3.65246 3.65246 1.46634 0.26236 2.61731 0.07580 43 0.58308 2.28061 1.53333 2.08920 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.05325 3.65246 3.65246 1.46634 0.26236 2.61731 0.07580 44 2.64312 0.52077 2.35727 1.42662 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.05325 3.65246 3.65246 1.46634 0.26236 2.61731 0.07580 45 2.51826 1.77777 2.15671 0.45464 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.05325 3.65246 3.65246 1.46634 0.26236 0.47227 0.97707 46 1.96627 1.12570 2.51025 0.78889 48 u - - - 1.38629 1.38629 1.38629 1.38629 0.04434 3.83107 3.83107 1.46634 0.26236 0.39284 1.12435 47 2.03031 1.12241 2.57949 0.76057 49 u - - - 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 48 3.03522 0.16703 3.61081 2.54166 50 C - - - 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 49 2.77466 0.23729 3.35670 2.17141 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 50 2.72083 0.61681 2.42656 1.18359 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 51 0.29286 3.10161 1.87491 2.89086 53 A - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 52 2.39787 0.48705 2.06773 1.78272 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 53 3.10375 2.28173 2.77191 0.23513 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 54 0.29295 3.10107 1.87484 2.89023 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 55 2.50665 3.31009 0.17760 3.10851 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 56 0.29304 3.10059 1.87478 2.88967 58 A - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 57 2.87872 0.79735 2.62119 0.86617 59 c - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 58 3.10165 2.28143 2.77106 0.23535 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 59 2.50599 3.30914 0.17776 3.10739 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.29807 3.89728 1.43779 1.46634 0.26236 1.09861 0.40547 60 1.98273 1.64163 1.84138 0.67326 62 U - - > 1.38629 1.38629 1.38629 1.38629 0.05325 3.65246 3.65246 1.46634 0.26236 0.15782 1.92416 61 1.08865 2.78254 0.64431 2.57144 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 62 0.50508 2.73760 1.36563 2.56918 64 A - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 63 2.50790 3.31188 0.17729 3.11060 65 G - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 64 3.51677 0.17661 3.22882 2.37950 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 65 3.10499 2.28190 2.77241 0.23500 67 U - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 66 3.08755 0.27330 2.62675 2.11021 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 67 3.51358 0.17686 3.22735 2.37889 69 C - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 68 3.10139 2.28139 2.77095 0.23538 70 U - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 69 2.51010 1.87813 0.95280 0.96705 71 g - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 70 2.44123 3.22250 0.19287 3.02611 72 G - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89728 3.89728 1.46634 0.26236 1.09861 0.40547 71 0.30875 2.82806 1.99517 2.65184 73 A - - > 1.38629 1.38629 1.38629 1.38629 0.07832 3.89728 2.89983 1.46634 0.26236 1.09861 0.40547 72 2.17625 2.93692 0.26075 2.76408 74 G - - > 1.38629 1.38629 1.38629 1.38629 0.04296 3.86192 3.86192 1.46634 0.26236 1.54997 0.23858 73 2.41353 3.18327 0.19973 2.99379 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.06067 3.86192 3.27444 1.46634 0.26236 1.54997 0.23858 74 1.15435 2.67511 0.63251 2.47006 76 G - - > 1.38629 1.38629 1.38629 1.38629 0.04372 3.84497 3.84497 1.46634 0.26236 1.70671 0.20023 75 3.01565 0.29185 2.73411 1.97219 77 C - - > 1.38629 1.38629 1.38629 1.38629 0.04372 3.84497 3.84497 1.46634 0.26236 1.70671 0.20023 76 0.33360 2.96191 1.77604 2.77051 78 A - - > 1.38629 1.38629 1.38629 1.38629 0.04372 3.84497 3.84497 1.46634 0.26236 1.70671 0.20023 77 1.96240 2.67069 0.34571 2.49422 79 G - - > 1.38629 1.38629 1.38629 1.38629 0.04372 3.84497 3.84497 1.46634 0.26236 1.70671 0.20023 78 2.43657 3.21051 0.19390 3.02693 80 G - - > 1.38629 1.38629 1.38629 1.38629 0.02210 3.82335 * 1.46634 0.26236 0.00000 * //