INFERNAL1/a [1.1.4 | Dec 2020] NAME cHP ACC RF00617 DESC Flavivirus capsid hairpin cHP STATES 139 NODES 39 CLEN 45 W 73 ALPH RNA RF no CONS yes MAP yes DATE Wed Jun 30 14:09:20 2021 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 /hps/nobackup/production/xfam/rfam/RELEASES/14.6/updates/RF00617/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 59 EFFN 15.877136 CKSUM 2309572139 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 40.20 NC 39.90 EFP7GF -19.9613 0.71938 ECMLC 0.59047 -9.34180 1.75288 1600000 839972 0.001429 ECMGC 0.36611 -24.71510 -5.84727 1600000 399967 0.001000 ECMLI 0.58640 -8.40679 2.55701 1600000 743570 0.001614 ECMGI 0.37572 -21.58524 -3.78822 1600000 320669 0.001247 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 73 106 -9.259 -9.466 -0.029 -5.889 IL 1 1 2 1 4 1 10 75 108 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 10 75 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 10 73 106 -10.172 -0.004 -8.826 1.980 -6.083 -5.484 -5.705 D 4 2 3 5 3 0 4 71 103 -6.795 -2.308 -0.342 IL 5 5 3 5 3 1 9 74 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 9 72 105 -10.172 -0.004 -8.826 -5.192 -4.735 -6.024 1.971 D 7 5 3 8 3 0 3 70 103 -6.795 -2.308 -0.342 IL 8 8 3 8 3 1 8 73 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 8 71 104 -10.172 -0.092 -4.032 -4.895 -6.529 1.977 -5.633 D 10 8 3 11 3 0 3 69 102 -6.795 -0.858 -1.187 IL 11 11 3 11 3 1 8 72 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 9 70 103 -10.104 -0.005 -8.758 1.520 -3.074 -3.283 -0.135 D 13 11 3 14 3 0 1 67 100 -7.989 -3.502 -0.140 IL 14 14 3 14 3 1 7 71 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 15 14 3 17 3 1 9 69 102 -10.104 -0.005 -8.758 0.992 0.563 -2.927 -1.312 D 16 14 3 17 3 0 1 67 100 -7.989 -3.502 -0.140 IL 17 17 3 17 3 1 7 70 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 8 68 101 -10.104 -0.005 -8.758 -3.471 -0.235 -4.269 1.589 D 19 17 3 20 3 0 1 67 100 -7.989 -0.315 -2.380 IL 20 20 3 20 3 1 4 69 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 7 67 100 -10.190 -0.004 -8.844 1.786 -4.448 -1.133 -4.311 D 22 20 3 23 3 0 0 65 98 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 3 68 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 6 66 99 -10.190 -0.004 -8.844 1.892 -4.761 -2.249 -4.603 D 25 23 3 26 3 0 0 64 97 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 2 67 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - c - - - ML 27 26 3 29 3 1 6 65 98 -10.190 -0.004 -8.844 0.131 0.967 -0.671 -1.632 D 28 26 3 29 3 0 0 63 96 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 2 66 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - C - - - ML 30 29 3 32 3 1 5 64 97 -10.190 -0.004 -8.844 0.711 1.088 -3.782 -2.596 D 31 29 3 32 3 0 0 62 95 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 1 65 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 4 63 96 -10.190 -0.004 -8.844 1.980 -6.107 -5.506 -5.726 D 34 32 3 35 3 0 0 61 94 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 1 64 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 4 62 95 -10.190 -0.004 -8.844 1.980 -6.107 -5.506 -5.726 D 37 35 3 38 3 0 0 60 93 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 1 63 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 1 3 61 94 -10.190 -0.004 -8.844 -5.510 1.971 -5.986 -4.616 D 40 38 3 41 3 0 0 59 92 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 1 62 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - G - - - ML 42 41 3 44 3 1 3 60 93 -10.190 -0.004 -8.844 -2.841 0.469 1.238 -3.088 D 43 41 3 44 3 0 0 58 91 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 1 61 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 45 44 3 47 3 1 2 59 92 -10.190 -0.004 -8.844 1.425 -4.513 0.288 -4.315 D 46 44 3 47 3 0 0 57 90 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 1 60 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 48 47 3 50 3 1 2 58 91 -10.504 -0.004 -8.822 1.185 -2.462 0.527 -3.266 D 49 47 3 50 3 0 0 57 89 -5.620 -0.734 -1.403 IL 50 50 3 50 3 1 1 58 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 50 - G - - MR 51 50 3 53 3 1 1 57 90 -10.504 -0.004 -8.822 -4.913 -6.550 1.977 -5.652 D 52 50 3 53 3 0 0 55 88 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 1 57 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 49 - U - - MR 54 53 3 56 3 1 1 56 89 -10.504 -0.004 -8.822 -5.221 -4.761 -6.053 1.971 D 55 53 3 56 3 0 0 54 87 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 1 56 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 48 - A - - MR 57 56 3 59 3 1 1 55 88 -10.504 -0.019 -6.295 1.980 -6.107 -5.506 -5.726 D 58 56 3 59 3 0 0 53 86 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 1 56 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 47 - U - - MR 60 59 3 62 3 1 1 54 87 -10.489 -0.004 -8.807 -5.196 -4.739 -6.028 1.971 D 61 59 3 62 3 0 0 52 85 -6.864 -2.042 -0.418 IR 62 62 3 62 3 1 1 55 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 46 - A - - MR 63 62 3 65 3 1 1 53 86 -10.489 -0.004 -8.807 1.933 -5.070 -3.074 -4.881 D 64 62 3 65 3 0 0 52 84 -6.864 -0.935 -1.094 IR 65 65 3 65 3 1 1 54 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 45 - A - - MR 66 65 3 68 5 1 1 52 85 -9.167 -0.009 -8.983 -9.195 -10.086 1.926 -4.669 -4.638 -3.048 D 67 65 3 68 5 0 0 51 83 -5.352 -0.707 -2.978 -4.409 -2.404 IR 68 68 3 68 5 1 1 52 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 17 44 a c - - MP 69 68 3 73 6 2 2 51 84 -10.436 -10.375 -0.008 -9.152 -9.432 -9.827 -6.354 2.996 -6.592 -1.270 -8.345 -7.788 -3.692 -6.627 -5.936 2.831 -6.501 -2.192 -3.798 -7.217 -5.631 -5.211 ML 70 68 3 73 6 1 1 50 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 3 73 6 1 1 49 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 3 73 6 0 0 47 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 51 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 50 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 18 43 A U - - MP 75 74 6 79 4 2 2 49 82 -9.259 -9.466 -0.089 -4.145 -6.744 -5.424 -6.095 3.915 -8.923 -9.986 -4.487 -6.031 -6.507 -2.082 -7.163 -1.110 -4.451 -8.205 -6.308 -5.173 ML 76 74 6 79 4 1 1 48 81 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 4 1 1 48 81 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 78 74 6 79 4 0 0 47 80 -4.568 -4.250 -2.265 -0.520 IL 79 79 5 79 4 1 1 50 82 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 80 80 6 80 3 1 1 49 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 19 - A - - - ML 81 80 6 83 3 1 1 47 80 -10.429 -0.004 -8.747 1.155 -4.380 0.737 -4.105 D 82 80 6 83 3 0 0 45 78 -6.856 -1.970 -0.442 IL 83 83 3 83 3 1 1 48 80 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 42 - u - - MR 84 83 3 86 5 1 1 46 79 -9.093 -0.010 -8.909 -9.121 -10.012 0.282 -1.930 -0.169 0.707 D 85 83 3 86 5 0 0 45 78 -6.389 -0.302 -4.015 -5.446 -3.440 IR 86 86 3 86 5 1 1 46 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 20 41 a u - - MP 87 86 3 91 6 2 2 45 78 -10.436 -10.375 -0.008 -9.152 -9.432 -9.827 -1.117 -4.200 -5.445 2.962 -6.636 -6.735 -2.144 -1.816 -5.400 1.557 -5.911 1.936 -2.313 -5.802 -4.033 -4.271 ML 88 86 3 91 6 1 1 43 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 3 91 6 1 1 43 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 3 91 6 0 0 40 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 45 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 44 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 21 40 G C - - MP 93 92 6 97 6 2 2 43 76 -10.436 -10.375 -0.008 -9.152 -9.432 -9.827 -1.526 -3.557 -4.836 1.051 -5.965 -5.319 -1.030 -5.498 -5.135 3.536 -5.393 -1.201 -1.295 -2.195 -3.043 -3.792 ML 94 92 6 97 6 1 1 41 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 41 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 38 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 43 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 42 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 22 39 g c - - MP 99 98 6 103 6 2 2 41 74 -10.436 -10.375 -0.008 -9.152 -9.432 -9.827 -5.103 -4.045 -5.012 1.696 -5.011 -5.773 2.471 -5.165 -5.142 2.528 -5.530 -1.638 -0.759 -5.079 -2.416 -3.843 ML 100 98 6 103 6 1 1 39 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 39 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 36 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 41 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 40 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 23 38 C G - - MP 105 104 6 109 6 2 2 39 72 -10.436 -10.375 -0.008 -9.152 -9.432 -9.827 -6.238 -6.174 -5.907 -2.155 -4.481 -2.311 3.655 -5.294 -5.900 0.040 -6.200 -3.998 0.541 -6.264 -2.099 -4.670 ML 106 104 6 109 6 1 1 37 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 37 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 34 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 38 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 38 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 24 37 g c - - MP 111 110 6 115 6 2 2 37 70 -10.436 -10.375 -0.008 -9.152 -9.432 -9.827 -5.655 -4.462 -5.585 -0.822 -5.462 -6.193 2.669 -5.624 -5.522 2.963 -5.908 -1.027 -1.307 -5.662 -2.896 -4.380 ML 112 110 6 115 6 1 1 35 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 35 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 32 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 36 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 36 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 25 36 G C - - MP 117 116 6 121 4 2 2 35 68 -9.259 -1.203 -0.837 -7.880 1.587 -4.804 -7.061 -1.555 -8.282 -6.750 -3.432 -7.159 -6.056 3.604 -6.459 -2.399 -3.701 -6.714 -5.494 -5.762 ML 118 116 6 121 4 1 1 32 65 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 4 1 1 31 64 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 120 116 6 121 4 0 0 30 63 -4.568 -4.250 -2.265 -0.520 IL 121 121 5 121 4 1 1 34 67 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 122 122 6 122 3 1 1 35 67 -0.808 -1.237 -7.759 0.000 0.000 0.000 0.000 [ MATL 33 ] 26 - G - - - ML 123 122 6 125 3 1 1 17 35 -2.794 -0.228 -8.844 -0.868 -2.353 1.546 -1.574 D 124 122 6 125 3 0 0 16 34 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 18 35 -1.807 -0.523 -5.758 0.000 0.000 0.000 0.000 [ MATL 34 ] 29 - A - - - ML 126 125 3 128 3 1 1 15 33 -10.190 -0.004 -8.844 1.175 -2.391 -1.793 0.336 D 127 125 3 128 3 0 0 16 34 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 30 - A - - - ML 129 128 3 131 3 1 1 13 32 -10.190 -0.004 -8.844 1.626 -1.144 -2.686 -1.710 D 130 128 3 131 3 0 0 15 33 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 31 - A - - - ML 132 131 3 134 3 1 1 12 30 -10.190 -0.004 -8.844 1.026 -2.496 0.594 -1.853 D 133 131 3 134 3 0 0 13 32 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 32 - A - - - ML 135 134 3 137 2 1 1 1 1 * 0.000 1.346 -0.938 -1.597 -0.724 D 136 134 3 137 2 0 0 0 0 * 0.000 IL 137 137 3 137 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 38 ] - - - - - - E 138 137 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME cHP ACC RF00617 DESC Flavivirus capsid hairpin cHP LENG 45 MAXL 104 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jun 30 14:09:20 2021 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 59 EFFN 33.047058 CKSUM 2309572139 STATS LOCAL MSV -7.3214 0.71938 STATS LOCAL VITERBI -7.6522 0.71938 STATS LOCAL FORWARD -3.6407 0.71938 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 0.95344 1.60137 1.42378 1.75932 1.38629 1.38629 1.38629 1.38629 0.01894 5.85242 4.14235 1.46634 0.26236 0.00000 * 1 0.00661 6.41791 5.94536 6.05698 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.00584 5.83933 5.83933 1.46634 0.26236 2.01881 0.14250 2 6.10452 5.66098 6.74320 0.00691 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.00584 5.83933 5.83933 1.46634 0.26236 2.01881 0.14250 3 5.42968 6.63320 0.00833 5.95281 3 G - - : 1.38629 1.38629 1.38629 1.38629 0.06993 5.83933 2.73909 1.46634 0.26236 0.30874 1.32566 4 0.30395 4.36798 4.59125 1.43010 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.00614 5.78958 5.78958 1.46634 0.26236 3.18648 0.04219 5 0.66008 0.92422 4.23567 2.63278 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.00614 5.78958 5.78958 1.46634 0.26236 3.18648 0.04219 6 4.65048 1.51260 5.19834 0.26843 6 U - - : 1.38629 1.38629 1.38629 1.38629 0.00614 5.78958 5.78958 1.46634 0.26236 0.08625 2.49334 7 0.13305 5.27107 2.17261 5.19187 7 A - - : 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 8 0.06038 5.49880 2.99874 5.37143 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 9 1.29606 0.62499 1.85437 3.36470 9 C - - : 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 10 0.87191 0.57409 5.16350 4.34969 10 C - - : 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 11 0.00653 6.43226 5.95869 6.06971 11 A - - : 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 12 0.00653 6.43226 5.95869 6.06971 12 A - - : 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 13 5.93174 0.00964 6.24462 5.29879 13 C - - : 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 14 4.52527 0.95170 0.52131 4.67311 14 G - - : 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 15 0.38836 5.39509 1.16348 5.32005 15 A - - : 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 16 0.54369 3.28004 0.98780 4.66970 16 A - - : 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 17 0.59326 5.75370 0.82101 5.44540 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 18 0.05027 5.87409 3.16592 5.51162 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.06150 5.85242 2.86865 1.46634 0.26236 1.09861 0.40547 19 0.57867 5.33429 0.84595 5.22366 19 A - - - 1.38629 1.38629 1.38629 1.38629 0.00609 5.79701 5.79701 1.46634 0.26236 0.09640 2.38703 20 0.58266 3.76116 0.88618 5.09901 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 21 1.95645 4.35651 0.20288 3.52525 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 22 1.53084 0.94080 0.98220 3.97154 22 c - - < 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 23 5.12367 0.16203 2.80103 2.49035 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 24 4.17677 0.81601 0.63221 4.50584 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 25 1.50761 5.70644 0.25953 5.56675 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 26 2.05354 3.21646 0.27874 2.59173 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.16932 1.87807 5.85242 0.30775 1.32841 1.09861 0.40547 27 0.51407 3.77739 2.92129 1.12332 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 28 0.22630 2.18975 3.59307 2.76361 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 29 0.63912 3.49768 0.93423 3.01416 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 30 0.39944 2.08202 2.66152 2.00409 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.60172 0.80016 5.85242 0.89236 0.52711 1.09861 0.40547 31 1.54693 0.26589 5.55939 4.09113 36 C - - > 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 32 4.74024 0.67792 0.81102 3.23941 37 C - - > 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 33 2.55931 2.61819 0.17166 4.90116 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 34 4.22475 1.00302 0.93145 1.49336 39 g - - > 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 35 3.29004 0.19545 4.18232 2.07928 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 36 3.32367 1.86975 5.26864 0.21733 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.06150 5.85242 2.86865 1.46634 0.26236 1.09861 0.40547 37 1.19055 3.28088 1.47419 0.84540 42 u - - - 1.38629 1.38629 1.38629 1.38629 0.00609 5.79701 5.79701 1.46634 0.26236 0.09640 2.38703 38 5.73577 4.52606 5.67830 0.01763 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 39 5.63148 0.02971 5.56492 3.82292 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 40 0.03848 5.40878 5.39265 3.55022 45 A - - : 1.38629 1.38629 1.38629 1.38629 0.01707 5.85242 4.26463 1.46634 0.26236 1.09861 0.40547 41 0.03403 5.72943 3.63662 5.55522 46 A - - : 1.38629 1.38629 1.38629 1.38629 0.00583 5.84118 5.84118 1.46634 0.26236 1.93050 0.15674 42 6.10772 5.66374 6.74663 0.00689 47 U - - : 1.38629 1.38629 1.38629 1.38629 0.00583 5.84118 5.84118 1.46634 0.26236 0.34270 1.23735 43 0.00653 6.43226 5.95869 6.06971 48 A - - : 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 44 6.12713 5.68050 6.76750 0.00677 49 U - - : 1.38629 1.38629 1.38629 1.38629 0.00576 5.85242 5.85242 1.46634 0.26236 1.09861 0.40547 45 5.44194 6.64625 0.00823 5.96523 50 G - - : 1.38629 1.38629 1.38629 1.38629 0.00289 5.84955 * 1.46634 0.26236 0.00000 * //