INFERNAL1/a [1.1.5 | Sep 2023] NAME cHP ACC RF00617 DESC Flavivirus capsid hairpin cHP STATES 139 NODES 39 CLEN 45 W 74 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 03:32:55 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00617/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 59 EFFN 15.358582 CKSUM 2309572139 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 46.90 NC 39.00 EFP7GF -19.6679 0.71938 ECMLC 0.59460 -9.25264 1.76185 1600000 838448 0.001431 ECMGC 0.36705 -24.52077 -5.70523 1600000 399428 0.001001 ECMLI 0.57353 -8.69422 2.50889 1600000 740736 0.001620 ECMGI 0.36805 -21.85778 -3.72114 1600000 317015 0.001262 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 74 108 -9.215 -9.422 -0.030 -5.867 IL 1 1 2 1 4 1 10 76 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 9 76 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 10 74 108 -10.129 -0.005 -8.783 1.979 -6.026 -5.429 -5.654 D 4 2 3 5 3 0 4 71 106 -6.785 -2.298 -0.344 IL 5 5 3 5 3 1 9 75 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 9 73 107 -10.129 -0.005 -8.783 -5.125 -4.674 -5.953 1.969 D 7 5 3 8 3 0 3 71 105 -6.785 -2.298 -0.344 IL 8 8 3 8 3 1 8 74 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 8 72 106 -10.129 -0.099 -3.931 -4.851 -6.478 1.976 -5.588 D 10 8 3 11 3 0 3 70 104 -6.785 -0.866 -1.177 IL 11 11 3 11 3 1 8 73 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 9 71 105 -10.054 -0.005 -8.708 1.586 -3.111 -3.320 -0.356 D 13 11 3 14 3 0 1 68 102 -8.032 -3.545 -0.135 IL 14 14 3 14 3 1 7 72 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 8 70 104 -10.054 -0.005 -8.708 1.078 0.425 -2.856 -1.289 D 16 14 3 17 3 0 1 68 102 -8.032 -3.545 -0.135 IL 17 17 3 17 3 1 7 71 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 8 69 103 -10.054 -0.005 -8.708 -3.383 -0.122 -4.195 1.551 D 19 17 3 20 3 0 1 68 102 -8.032 -0.304 -2.424 IL 20 20 3 20 3 1 4 70 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 7 68 102 -10.147 -0.005 -8.801 1.777 -4.390 -1.083 -4.249 D 22 20 3 23 3 0 0 66 100 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 3 69 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 6 67 101 -10.147 -0.005 -8.801 1.925 -4.969 -2.902 -4.788 D 25 23 3 26 3 0 0 65 99 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 2 68 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - C - - - ML 27 26 3 29 3 1 6 66 100 -10.147 -0.005 -8.801 0.072 1.070 -0.929 -1.629 D 28 26 3 29 3 0 0 64 98 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 2 67 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - C - - - ML 30 29 3 32 3 1 5 65 99 -10.147 -0.005 -8.801 0.552 1.194 -3.808 -2.515 D 31 29 3 32 3 0 0 63 97 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 1 66 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 4 64 98 -10.147 -0.005 -8.801 1.979 -6.050 -5.452 -5.676 D 34 32 3 35 3 0 0 62 96 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 1 65 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 4 63 97 -10.147 -0.005 -8.801 1.979 -6.050 -5.452 -5.676 D 37 35 3 38 3 0 0 61 95 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 1 64 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 1 3 62 96 -10.147 -0.005 -8.801 -5.464 1.970 -5.943 -4.569 D 40 38 3 41 3 0 0 60 94 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 1 63 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - G - - - ML 42 41 3 44 3 1 3 61 95 -10.147 -0.005 -8.801 -2.776 0.302 1.324 -3.089 D 43 41 3 44 3 0 0 59 93 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 1 62 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 45 44 3 47 3 1 2 60 94 -10.147 -0.005 -8.801 1.396 -4.457 0.345 -4.245 D 46 44 3 47 3 0 0 58 92 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 1 61 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 48 47 3 50 3 1 2 59 93 -10.462 -0.004 -8.780 1.264 -2.356 0.371 -3.184 D 49 47 3 50 3 0 0 57 91 -5.620 -0.734 -1.403 IL 50 50 3 50 3 1 1 59 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 50 - G - - MR 51 50 3 53 3 1 1 58 92 -10.462 -0.004 -8.780 -4.869 -6.499 1.976 -5.607 D 52 50 3 53 3 0 0 56 90 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 1 58 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 49 - U - - MR 54 53 3 56 3 1 1 57 91 -10.462 -0.004 -8.780 -5.153 -4.700 -5.983 1.970 D 55 53 3 56 3 0 0 55 89 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 1 57 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 48 - A - - MR 57 56 3 59 3 1 1 56 90 -10.462 -0.021 -6.203 1.979 -6.050 -5.452 -5.676 D 58 56 3 59 3 0 0 54 88 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 1 56 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 47 - U - - MR 60 59 3 62 3 1 1 55 89 -10.446 -0.004 -8.764 -5.127 -4.676 -5.956 1.969 D 61 59 3 62 3 0 0 53 87 -6.881 -2.059 -0.412 IR 62 62 3 62 3 1 1 55 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 46 - A - - MR 63 62 3 65 3 1 1 54 88 -10.446 -0.004 -8.764 1.927 -4.975 -2.959 -4.792 D 64 62 3 65 3 0 0 52 86 -6.881 -0.920 -1.111 IR 65 65 3 65 3 1 1 54 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 45 - A - - MR 66 65 3 68 5 1 1 53 87 -9.126 -0.009 -8.941 -9.153 -10.045 1.919 -4.553 -4.540 -2.923 D 67 65 3 68 5 0 0 51 85 -5.352 -0.707 -2.978 -4.409 -2.404 IR 68 68 3 68 5 1 1 53 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 17 44 A C - - MP 69 68 3 73 6 2 2 52 86 -10.403 -10.343 -0.009 -9.119 -9.399 -9.794 -6.232 3.100 -6.451 -1.168 -8.228 -8.024 -3.619 -6.485 -5.866 2.692 -6.457 -2.107 -3.715 -7.250 -5.536 -5.067 ML 70 68 3 73 6 1 1 51 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 3 73 6 1 1 50 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 3 73 6 0 0 48 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 51 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 51 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 18 43 A U - - MP 75 74 6 79 4 2 2 50 84 -9.215 -9.422 -0.081 -4.277 -6.636 -5.313 -6.082 3.907 -8.824 -9.903 -4.375 -6.027 -6.398 -1.971 -7.055 -0.961 -4.339 -8.101 -6.198 -5.112 ML 76 74 6 79 4 1 1 49 83 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 4 1 1 49 83 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 78 74 6 79 4 0 0 47 82 -4.568 -4.250 -2.265 -0.520 IL 79 79 5 79 4 1 1 50 84 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 80 80 6 80 3 1 1 50 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 19 - A - - - ML 81 80 6 83 3 1 1 48 82 -10.395 -0.005 -8.712 1.243 -4.350 0.609 -4.089 D 82 80 6 83 3 0 0 46 80 -6.749 -1.863 -0.482 IL 83 83 3 83 3 1 1 48 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 42 - u - - MR 84 83 3 86 5 1 1 47 81 -9.059 -0.010 -8.875 -9.087 -9.978 0.292 -1.907 -0.358 0.790 D 85 83 3 86 5 0 0 46 80 -6.294 -0.325 -3.920 -5.351 -3.345 IR 86 86 3 86 5 1 1 47 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 20 41 A U - - MP 87 86 3 91 6 2 2 46 80 -10.403 -10.343 -0.009 -9.119 -9.399 -9.794 -1.020 -4.149 -5.367 3.031 -6.495 -6.643 -2.066 -1.743 -5.324 1.529 -5.837 1.772 -2.235 -5.718 -3.940 -4.204 ML 88 86 3 91 6 1 1 44 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 3 91 6 1 1 44 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 3 91 6 0 0 41 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 45 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 45 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 21 40 G C - - MP 93 92 6 97 6 2 2 44 78 -10.403 -10.343 -0.009 -9.119 -9.399 -9.794 -1.637 -3.537 -4.821 0.993 -5.948 -5.296 -1.014 -5.482 -5.114 3.545 -5.372 -1.182 -1.279 -2.117 -3.027 -3.777 ML 94 92 6 97 6 1 1 42 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 42 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 39 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 43 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 43 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 22 39 g c - - MP 99 98 6 103 6 2 2 42 76 -10.403 -10.343 -0.009 -9.119 -9.399 -9.794 -5.009 -3.901 -4.909 1.776 -5.060 -5.646 2.322 -5.142 -5.079 2.605 -5.450 -1.502 -0.770 -4.942 -2.437 -3.763 ML 100 98 6 103 6 1 1 40 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 40 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 37 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 41 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 41 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 23 38 C G - - MP 105 104 6 109 6 2 2 40 74 -10.403 -10.343 -0.009 -9.119 -9.399 -9.794 -6.178 -6.111 -5.853 -2.093 -4.434 -2.217 3.648 -5.244 -5.845 -0.057 -6.148 -3.934 0.621 -6.207 -2.050 -4.616 ML 106 104 6 109 6 1 1 38 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 38 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 35 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 39 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 39 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 24 37 G C - - MP 111 110 6 115 6 2 2 38 72 -10.403 -10.343 -0.009 -9.119 -9.399 -9.794 -5.585 -4.310 -5.513 -0.709 -5.573 -6.042 2.500 -5.652 -5.469 3.075 -5.834 -0.931 -1.356 -5.513 -2.969 -4.336 ML 112 110 6 115 6 1 1 36 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 35 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 33 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 37 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 37 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 25 36 G C - - MP 117 116 6 121 4 2 2 36 70 -9.215 -1.335 -0.743 -7.836 1.699 -4.753 -6.921 -1.465 -8.160 -6.774 -3.341 -7.021 -5.996 3.568 -6.414 -2.327 -3.607 -6.686 -5.387 -5.619 ML 118 116 6 121 4 1 1 33 67 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 4 1 1 32 66 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 120 116 6 121 4 0 0 31 65 -4.568 -4.250 -2.265 -0.520 IL 121 121 5 121 4 1 1 35 69 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 122 122 6 122 3 1 1 36 70 -0.778 -1.279 -7.646 0.000 0.000 0.000 0.000 [ MATL 33 ] 26 - G - - - ML 123 122 6 125 3 1 1 17 35 -3.174 -0.173 -8.801 -0.862 -2.283 1.531 -1.496 D 124 122 6 125 3 0 0 16 34 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 17 35 -1.877 -0.505 -5.441 0.000 0.000 0.000 0.000 [ MATL 34 ] 29 - A - - - ML 126 125 3 128 3 1 1 15 33 -10.147 -0.005 -8.801 1.142 -2.354 -1.904 0.411 D 127 125 3 128 3 0 0 16 34 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 30 - A - - - ML 129 128 3 131 3 1 1 13 32 -10.147 -0.005 -8.801 1.647 -1.085 -2.674 -2.054 D 130 128 3 131 3 0 0 15 33 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 31 - a - - - ML 132 131 3 134 3 1 1 12 30 -10.147 -0.005 -8.801 0.968 -2.395 0.635 -1.733 D 133 131 3 134 3 0 0 13 32 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 32 - A - - - ML 135 134 3 137 2 1 1 1 1 * 0.000 1.314 -0.855 -1.651 -0.640 D 136 134 3 137 2 0 0 0 0 * 0.000 IL 137 137 3 137 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 38 ] - - - - - - E 138 137 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME cHP ACC RF00617 DESC Flavivirus capsid hairpin cHP LENG 45 MAXL 105 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 03:32:55 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00617/CM NSEQ 59 EFFN 31.289734 CKSUM 2309572139 STATS LOCAL MSV -7.1511 0.71938 STATS LOCAL VITERBI -7.6728 0.71938 STATS LOCAL FORWARD -3.6602 0.71938 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 0.94418 1.60116 1.44129 1.75610 1.38629 1.38629 1.38629 1.38629 0.01937 5.80280 4.12494 1.46634 0.26236 0.00000 * 1 0.00697 6.36123 5.89277 6.00682 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.00614 5.78956 5.78956 1.46634 0.26236 1.99526 0.14616 2 6.01615 5.58451 6.64840 0.00752 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.00614 5.78956 5.78956 1.46634 0.26236 1.99526 0.14616 3 5.38164 6.58191 0.00875 5.90412 3 G - - : 1.38629 1.38629 1.38629 1.38629 0.07518 5.78956 2.66844 1.46634 0.26236 0.31740 1.30211 4 0.25984 4.31725 4.53445 1.58592 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.00648 5.73513 5.73513 1.46634 0.26236 3.20566 0.04138 5 0.59838 1.02108 4.15403 2.59838 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.00648 5.73513 5.73513 1.46634 0.26236 3.20566 0.04138 6 4.57940 1.43425 5.13793 0.29360 6 U - - : 1.38629 1.38629 1.38629 1.38629 0.00648 5.73513 5.73513 1.46634 0.26236 0.08454 2.51251 7 0.13868 5.20541 2.13647 5.12753 7 A - - : 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 8 0.03861 5.62968 3.50439 5.46845 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 9 1.33871 0.55634 2.05598 3.30926 9 C - - : 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 10 0.97461 0.50610 5.16844 4.25986 10 C - - : 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 11 0.00688 6.37595 5.90642 6.01983 11 A - - : 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 12 0.00688 6.37595 5.90642 6.01983 12 A - - : 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 13 5.87488 0.01019 6.18732 5.24467 13 C - - : 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 14 4.37948 1.06230 0.45945 4.58742 14 G - - : 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 15 0.40874 5.33990 1.12231 5.26024 15 A - - : 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 16 0.48704 3.19482 1.09537 4.58844 16 A - - : 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 17 0.52700 5.68714 0.91246 5.36006 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 18 0.05551 5.81086 3.06480 5.43994 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.05622 5.80280 2.96327 1.46634 0.26236 1.09861 0.40547 19 0.51593 5.28944 0.93539 5.18910 19 A - - - 1.38629 1.38629 1.38629 1.38629 0.00637 5.75294 5.75294 1.46634 0.26236 0.11056 2.25694 20 0.52843 3.70709 0.96896 5.04440 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 21 2.01856 4.30851 0.19528 3.47083 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 22 1.46601 1.04159 0.92760 3.87469 22 g - - < 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 23 5.04808 0.16395 2.88237 2.42150 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 24 4.08285 0.92520 0.55253 4.49216 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 25 1.43270 5.64050 0.28283 5.48863 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 26 2.05276 3.15633 0.28854 2.52968 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.12913 2.13608 5.80280 0.26863 1.44573 1.09861 0.40547 27 0.53667 3.72668 3.04892 1.06762 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 28 0.21448 2.13196 3.55274 3.08378 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 29 0.67811 3.41164 0.90346 2.91374 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 30 0.42047 2.01590 2.72289 1.93533 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.53250 0.89197 5.80280 0.92895 0.50247 1.09861 0.40547 31 1.47238 0.28986 5.48657 4.01104 36 C - - > 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 32 4.72147 0.59734 0.91973 3.16538 37 C - - > 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 33 2.48992 2.67282 0.17436 4.82385 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 34 4.13021 0.95027 1.03037 1.42542 39 c - - > 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 35 3.33393 0.18724 4.13409 2.12790 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 36 3.25420 1.89733 5.20884 0.21573 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.05622 5.80280 2.96327 1.46634 0.26236 1.09861 0.40547 37 1.18046 3.24167 1.62683 0.78261 42 u - - - 1.38629 1.38629 1.38629 1.38629 0.00637 5.75294 5.75294 1.46634 0.26236 0.11056 2.25694 38 5.65347 4.43818 5.60806 0.01917 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 39 5.55129 0.03245 5.48857 3.73328 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 40 0.04233 5.29444 5.29760 3.46025 45 A - - : 1.38629 1.38629 1.38629 1.38629 0.01822 5.80280 4.19757 1.46634 0.26236 1.09861 0.40547 41 0.03715 5.63323 3.55178 5.46933 46 A - - : 1.38629 1.38629 1.38629 1.38629 0.00613 5.79071 5.79071 1.46634 0.26236 1.94291 0.15465 42 6.01813 5.58622 6.65052 0.00750 47 U - - : 1.38629 1.38629 1.38629 1.38629 0.00613 5.79071 5.79071 1.46634 0.26236 0.33768 1.24976 43 0.00688 6.37595 5.90642 6.01983 48 A - - : 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 44 6.03896 5.60428 6.67284 0.00736 49 U - - : 1.38629 1.38629 1.38629 1.38629 0.00606 5.80280 5.80280 1.46634 0.26236 1.09861 0.40547 45 5.39406 6.59520 0.00864 5.91671 50 G - - : 1.38629 1.38629 1.38629 1.38629 0.00303 5.79977 * 1.46634 0.26236 0.00000 * //