INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD98 ACC RF00607 DESC Small nucleolar RNA SNORD98 STATES 199 NODES 63 CLEN 65 W 83 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 5 05:25:09 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00607/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 10 EFFN 2.807617 CKSUM 1520733680 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 50.50 NC 49.70 EFP7GF -10.1282 0.71885 ECMLC 0.64916 -6.02083 2.96303 1600000 409217 0.002932 ECMGC 0.36881 -18.40557 -2.96865 1600000 118743 0.003369 ECMLI 0.61019 -4.56749 4.58449 1600000 319502 0.003756 ECMGI 0.37938 -13.92283 0.30191 1600000 88263 0.004532 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 83 104 -9.239 -9.178 -0.019 -7.954 -8.234 -8.629 IL 1 1 2 1 6 1 24 85 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 24 85 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 68 G C - - MP 3 2 3 7 6 2 25 83 104 -9.239 -9.178 -0.019 -7.954 -8.234 -8.629 -5.329 -3.379 -5.508 -0.206 -6.053 -4.914 -1.271 -5.774 -4.690 3.752 -4.989 -1.107 -1.643 -4.846 -3.344 -4.376 ML 4 2 3 7 6 1 21 82 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 21 82 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 17 79 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 23 83 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 23 83 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 67 a u - - MP 9 8 6 13 6 2 24 81 102 -9.239 -9.178 -0.019 -7.954 -8.234 -8.629 -2.600 -2.442 -2.720 2.267 -0.354 -3.558 1.339 -2.926 -2.779 1.617 -3.306 -0.547 1.012 -2.861 -0.473 -1.815 ML 10 8 6 13 6 1 21 80 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 20 80 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 16 78 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 22 81 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 22 81 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 66 G C - - MP 15 14 6 19 6 2 22 79 100 -9.239 -9.178 -0.019 -7.954 -8.234 -8.629 -4.106 -2.917 -4.040 0.603 -4.157 -4.448 1.037 -4.301 -4.071 3.288 -4.407 -0.616 -0.035 -3.935 -1.619 -2.963 ML 16 14 6 19 6 1 20 78 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 18 78 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 16 76 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 20 79 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 20 79 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 65 u a - - MP 21 20 6 25 4 2 20 77 98 -7.269 -7.476 -0.202 -3.077 -3.226 -3.145 -3.271 1.117 -2.583 -4.029 1.716 -3.156 -3.272 0.744 -3.764 -1.158 2.590 -3.455 0.324 -2.208 ML 22 20 6 25 4 1 19 78 99 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 17 77 98 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 16 76 97 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 20 79 100 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 20 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - u - - - ML 27 26 6 29 3 1 19 75 96 -8.120 -0.018 -6.774 0.151 -0.842 -0.632 0.754 D 28 26 6 29 3 0 15 74 95 -7.238 -0.577 -1.630 IL 29 29 3 29 3 1 18 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 30 29 3 32 3 1 18 74 95 -8.265 -0.017 -6.919 1.401 -1.863 -0.521 -1.367 D 31 29 3 32 3 0 13 73 94 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 17 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 33 32 3 35 3 1 17 73 94 -8.265 -0.017 -6.919 -2.056 -1.956 -2.813 1.748 D 34 32 3 35 3 0 12 72 92 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 17 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 36 35 3 38 3 1 16 72 93 -8.265 -0.017 -6.919 -2.207 -3.513 1.833 -2.899 D 37 35 3 38 3 0 12 71 91 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 16 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 39 38 3 41 3 1 16 71 92 -8.265 -0.017 -6.919 1.822 -2.981 -2.553 -2.585 D 40 38 3 41 3 0 11 70 90 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 15 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 42 41 3 44 3 1 15 70 91 -8.265 -0.017 -6.919 -2.056 -1.956 -2.813 1.748 D 43 41 3 44 3 0 10 69 89 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 14 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 45 44 3 47 3 1 14 69 90 -8.265 -0.017 -6.919 -2.207 -3.513 1.833 -2.899 D 46 44 3 47 3 0 10 68 88 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 13 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 48 47 3 50 3 1 13 68 89 -8.265 -0.017 -6.919 -0.595 -0.637 -1.599 1.242 D 49 47 3 50 3 0 9 66 87 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 13 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - g - - - ML 51 50 3 53 3 1 12 67 88 -8.265 -0.017 -6.919 0.012 -0.632 0.372 0.073 D 52 50 3 53 3 0 8 65 86 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 12 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 54 53 3 56 3 1 11 66 87 -2.277 -0.626 -2.779 -0.437 -1.181 -1.670 1.326 D 55 53 3 56 3 0 8 63 83 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 12 67 87 -1.339 -0.795 -5.146 0.000 0.000 0.000 0.000 [ MATL 15 ] 17 - A - - - ML 57 56 3 59 3 1 12 63 83 -8.052 -0.019 -6.706 1.352 -1.411 -1.392 -0.534 D 58 56 3 59 3 0 7 62 82 -7.533 -0.452 -1.924 IL 59 59 3 59 3 1 10 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 18 - A - - - ML 60 59 3 62 3 1 11 62 82 -8.265 -0.017 -6.919 1.822 -2.981 -2.553 -2.585 D 61 59 3 62 3 0 5 61 81 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 10 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 19 - A - - - ML 63 62 3 65 3 1 10 61 81 -8.265 -0.017 -6.919 1.421 -1.885 -0.578 -1.394 D 64 62 3 65 3 0 4 60 79 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 9 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 20 - u - - - ML 66 65 3 68 3 1 10 60 80 -8.265 -0.017 -6.919 -0.065 -0.377 -1.286 0.898 D 67 65 3 68 3 0 4 59 78 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 8 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 21 - C - - - ML 69 68 3 71 3 1 9 59 79 -8.265 -0.017 -6.919 -2.478 1.775 -3.307 -1.748 D 70 68 3 71 3 0 3 57 77 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 7 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 22 - C - - - ML 72 71 3 74 3 1 8 58 78 -8.265 -0.017 -6.919 -2.478 1.775 -3.307 -1.748 D 73 71 3 74 3 0 2 56 76 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 7 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 23 - U - - - ML 75 74 3 77 3 1 8 57 76 -8.265 -0.017 -6.919 -2.056 -1.956 -2.813 1.748 D 76 74 3 77 3 0 2 55 75 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 6 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 24 - A - - - ML 78 77 3 80 3 1 7 56 75 -8.265 -0.017 -6.919 1.822 -2.981 -2.553 -2.585 D 79 77 3 80 3 0 1 54 74 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 5 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 25 - U - - - ML 81 80 3 83 3 1 7 55 74 -8.265 -0.017 -6.919 -2.056 -1.956 -2.813 1.748 D 82 80 3 83 3 0 0 53 73 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 5 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 26 - U - - - ML 84 83 3 86 3 1 6 54 73 -8.265 -0.017 -6.919 -2.056 -1.956 -2.813 1.748 D 85 83 3 86 3 0 0 52 72 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 4 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 27 - C - - - ML 87 86 3 89 3 1 5 53 72 -8.265 -0.017 -6.919 -2.478 1.775 -3.307 -1.748 D 88 86 3 89 3 0 0 51 71 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 4 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 28 - C - - - ML 90 89 3 92 3 1 5 52 71 -8.265 -0.017 -6.919 -2.478 1.775 -3.307 -1.748 D 91 89 3 92 3 0 0 50 70 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 3 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 29 - A - - - ML 93 92 3 95 3 1 4 51 70 -8.265 -0.017 -6.919 1.822 -2.981 -2.553 -2.585 D 94 92 3 95 3 0 0 49 69 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 2 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 30 - U - - - ML 96 95 3 98 3 1 4 49 69 -8.265 -0.017 -6.919 -2.056 -1.956 -2.813 1.748 D 97 95 3 98 3 0 0 48 68 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 2 52 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 31 - U - - - ML 99 98 3 101 3 1 3 48 68 -8.265 -0.017 -6.919 -2.056 -1.956 -2.813 1.748 D 100 98 3 101 3 0 0 47 67 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 2 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 32 - g - - - ML 102 101 3 104 3 1 3 47 67 -8.265 -0.017 -6.919 -0.197 -1.192 0.754 0.005 D 103 101 3 104 3 0 0 46 66 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - C - - - ML 105 104 3 107 3 1 2 46 66 -8.265 -0.017 -6.919 -2.478 1.775 -3.307 -1.748 D 106 104 3 107 3 0 0 45 65 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - U - - - ML 108 107 3 110 3 1 2 45 65 -8.265 -0.017 -6.919 -2.056 -1.956 -2.813 1.748 D 109 107 3 110 3 0 0 44 63 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 35 - G - - - ML 111 110 3 113 3 1 2 44 64 -8.265 -0.017 -6.919 -2.207 -3.513 1.833 -2.899 D 112 110 3 113 3 0 0 43 62 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 36 - A - - - ML 114 113 3 116 3 1 2 43 62 -8.265 -0.017 -6.919 1.822 -2.981 -2.553 -2.585 D 115 113 3 116 3 0 0 42 61 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 37 - A - - - ML 117 116 3 119 3 1 1 42 61 -8.265 -0.017 -6.919 1.822 -2.981 -2.553 -2.585 D 118 116 3 119 3 0 0 41 60 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 38 - A - - - ML 120 119 3 122 3 1 1 41 60 -2.558 -0.283 -6.919 1.103 -0.813 -1.261 -0.207 D 121 119 3 122 3 0 0 39 58 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 41 60 -2.004 -0.489 -4.704 0.000 0.000 0.000 0.000 [ MATL 37 ] 40 - U - - - ML 123 122 3 125 3 1 1 39 59 -8.265 -0.017 -6.919 -1.060 -0.062 -1.831 1.190 D 124 122 3 125 3 0 0 38 58 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 41 - a - - - ML 126 125 3 128 3 1 1 38 58 -8.265 -0.017 -6.919 0.571 -0.601 -0.219 -0.005 D 127 125 3 128 3 0 0 37 57 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 42 - C - - - ML 129 128 3 131 3 1 1 37 57 -8.265 -0.017 -6.919 -0.403 1.014 -1.017 -0.453 D 130 128 3 131 3 0 0 36 55 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 43 - A - - - ML 132 131 3 134 3 1 1 36 55 -8.265 -0.017 -6.919 1.237 -1.331 -1.396 -0.208 D 133 131 3 134 3 0 0 35 54 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 44 - g - - - ML 135 134 3 137 3 1 1 35 54 -8.265 -0.017 -6.919 -0.175 -0.580 0.860 -0.667 D 136 134 3 137 3 0 0 34 53 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 45 - U - - - ML 138 137 3 140 3 1 1 34 53 -8.265 -0.017 -6.919 -2.056 -1.956 -2.813 1.748 D 139 137 3 140 3 0 0 33 52 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 46 - G - - - ML 141 140 3 143 3 1 1 33 52 -8.265 -0.017 -6.919 -2.207 -3.513 1.833 -2.899 D 142 140 3 143 3 0 0 32 51 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 47 - U - - - ML 144 143 3 146 3 1 1 32 51 -8.265 -0.017 -6.919 -2.056 -1.956 -2.813 1.748 D 145 143 3 146 3 0 0 31 50 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 34 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 48 - G - - - ML 147 146 3 149 3 1 1 31 50 -8.265 -0.017 -6.919 -2.207 -3.513 1.833 -2.899 D 148 146 3 149 3 0 0 30 49 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 49 - G - - - ML 150 149 3 152 3 1 1 30 49 -8.265 -0.017 -6.919 -2.207 -3.513 1.833 -2.899 D 151 149 3 152 3 0 0 29 48 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 32 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 50 - A - - - ML 153 152 3 155 3 1 1 29 48 -8.265 -0.017 -6.919 1.822 -2.981 -2.553 -2.585 D 154 152 3 155 3 0 0 28 47 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 51 - A - - - ML 156 155 3 158 3 1 1 28 47 -8.265 -0.313 -2.384 1.822 -2.981 -2.553 -2.585 D 157 155 3 158 3 0 0 27 46 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 52 - c - - - ML 159 158 3 161 3 1 1 27 46 -7.973 -0.020 -6.627 0.411 0.500 -1.174 -0.299 D 160 158 3 161 3 0 0 26 44 -7.800 -0.365 -2.192 IL 161 161 3 161 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 53 - A - - - ML 162 161 3 164 3 1 1 25 44 -8.265 -0.017 -6.919 1.822 -2.981 -2.553 -2.585 D 163 161 3 164 3 0 0 25 43 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 54 - u - - - ML 165 164 3 167 3 1 1 24 43 -8.265 -0.017 -6.919 0.257 -0.131 -1.149 0.527 D 166 164 3 167 3 0 0 23 42 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 55 - g - - - ML 168 167 3 170 3 1 1 23 42 -8.265 -0.017 -6.919 0.207 -0.665 0.314 -0.041 D 169 167 3 170 3 0 0 22 41 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 56 - A - - - ML 171 170 3 173 3 1 1 22 41 -8.265 -0.017 -6.919 1.385 -0.845 -1.530 -1.042 D 172 170 3 173 3 0 0 21 40 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 57 - u - - - ML 174 173 3 176 3 1 1 21 40 -8.265 -0.017 -6.919 -0.024 -0.042 -1.241 0.698 D 175 173 3 176 3 0 0 20 39 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 58 - g - - - ML 177 176 3 179 3 1 1 20 38 -8.265 -0.017 -6.919 -0.104 -0.621 0.376 0.166 D 178 176 3 179 3 0 0 19 38 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 59 - A - - - ML 180 179 3 182 3 1 1 19 37 -8.265 -0.017 -6.919 1.437 -1.902 -0.621 -1.414 D 181 179 3 182 3 0 0 18 37 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 60 - A - - - ML 183 182 3 185 3 1 1 17 36 -8.265 -0.017 -6.919 1.522 -2.017 -0.890 -1.553 D 184 182 3 185 3 0 0 17 36 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 61 - C - - - ML 186 185 3 188 3 1 1 16 35 -8.265 -0.017 -6.919 -2.478 1.775 -3.307 -1.748 D 187 185 3 188 3 0 0 16 34 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 62 - U - - - ML 189 188 3 191 3 1 1 15 33 -8.265 -0.017 -6.919 -2.056 -1.956 -2.813 1.748 D 190 188 3 191 3 0 0 15 33 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 63 - G - - - ML 192 191 3 194 3 1 1 13 31 -8.265 -0.017 -6.919 -2.207 -3.513 1.833 -2.899 D 193 191 3 194 3 0 0 13 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 64 - A - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 1.822 -2.981 -2.553 -2.585 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 62 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD98 ACC RF00607 DESC Small nucleolar RNA SNORD98 LENG 65 MAXL 145 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 5 05:25:09 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00607/CM NSEQ 10 EFFN 3.149414 CKSUM 1520733680 STATS LOCAL MSV -7.9783 0.71885 STATS LOCAL VITERBI -8.8992 0.71885 STATS LOCAL FORWARD -3.6408 0.71885 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.17910 1.62620 1.53194 1.27421 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 0.00000 * 1 2.84037 3.62471 0.12000 3.57479 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 2 1.05850 1.53058 1.39378 1.66878 2 a - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 3 2.23454 2.00265 0.40014 2.43321 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 4 1.85410 1.51644 1.98995 0.71905 4 u - - < 1.38629 1.38629 1.38629 1.38629 0.14565 4.14879 2.12230 1.46634 0.26236 1.09861 0.40547 5 1.28309 1.99948 1.83188 0.85027 5 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03587 4.03901 4.03901 1.46634 0.26236 0.23396 1.56731 6 0.39336 2.75923 1.75231 2.42476 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 7 2.94720 2.85509 3.47604 0.15195 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 8 3.05488 3.97642 0.09947 3.54742 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 9 0.10605 3.59336 3.28424 3.33411 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 10 2.94720 2.85509 3.47604 0.15195 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 11 3.05488 3.97642 0.09947 3.54742 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 12 1.83665 1.85126 2.55567 0.50092 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 13 1.38957 1.83519 1.10762 1.34366 13 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 14 1.71947 2.26799 2.61578 0.43973 14 U - - _ 1.38629 1.38629 1.38629 1.38629 0.51309 1.44231 1.80197 0.60904 0.78499 1.09861 0.40547 15 0.42490 2.41766 2.40995 1.78849 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03781 3.98723 3.98723 1.46634 0.26236 0.17508 1.82876 16 0.10605 3.59336 3.28424 3.33411 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 17 0.37895 2.77494 1.79405 2.44439 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 18 1.43926 1.65457 2.31497 0.74876 20 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 19 3.27307 0.13253 3.84219 2.73666 21 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 20 3.27307 0.13253 3.84219 2.73666 22 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 21 2.94720 2.85509 3.47604 0.15195 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 22 0.10605 3.59336 3.28424 3.33411 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 23 2.94720 2.85509 3.47604 0.15195 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 24 2.94720 2.85509 3.47604 0.15195 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 25 3.27307 0.13253 3.84219 2.73666 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 26 3.27307 0.13253 3.84219 2.73666 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 27 0.10605 3.59336 3.28424 3.33411 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 28 2.94720 2.85509 3.47604 0.15195 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 29 2.94720 2.85509 3.47604 0.15195 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 30 1.54572 2.25579 0.83602 1.39184 32 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 31 3.27307 0.13253 3.84219 2.73666 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 32 2.94720 2.85509 3.47604 0.15195 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 33 3.05488 3.97642 0.09947 3.54742 35 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 34 0.10605 3.59336 3.28424 3.33411 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 35 0.10605 3.59336 3.28424 3.33411 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 36 0.59977 1.97054 2.30893 1.54969 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.23890 1.62597 4.14879 0.15340 1.95045 1.09861 0.40547 37 2.19401 1.42629 2.73191 0.53916 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 38 0.98354 1.81112 1.53542 1.39764 41 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 39 1.70099 0.64858 2.11929 1.74529 42 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 40 0.50593 2.36146 2.41123 1.54614 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 41 1.53614 1.79347 0.75655 1.90297 44 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 42 2.94720 2.85509 3.47604 0.15195 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 43 3.05488 3.97642 0.09947 3.54742 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 44 2.94720 2.85509 3.47604 0.15195 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 45 3.05488 3.97642 0.09947 3.54742 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 46 3.05488 3.97642 0.09947 3.54742 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 47 0.10605 3.59336 3.28424 3.33411 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 48 0.10605 3.59336 3.28424 3.33411 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.26211 4.14879 1.53808 1.46634 0.26236 1.09861 0.40547 49 1.09641 1.01220 2.24409 1.62714 52 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04021 3.92689 3.92689 1.46634 0.26236 0.13712 2.05468 50 0.10605 3.59336 3.28424 3.33411 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 51 1.20527 1.47204 2.21319 1.01727 54 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 52 1.24740 1.85790 1.15076 1.42565 55 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 53 0.40115 1.98667 2.51811 2.18313 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 54 1.40967 1.40725 2.28145 0.89447 57 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 55 1.47487 1.82808 1.10432 1.27643 58 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 56 0.36853 2.78708 1.82531 2.45946 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 57 0.30952 2.87078 2.02259 2.56089 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 58 3.27307 0.13253 3.84219 2.73666 61 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 59 2.94720 2.85509 3.47604 0.15195 62 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 60 3.05488 3.97642 0.09947 3.54742 63 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 61 0.10605 3.59336 3.28424 3.33411 64 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 62 0.88324 2.16127 1.24330 1.69855 65 a - - > 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 63 2.68672 0.44688 1.88886 1.95878 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 64 1.64859 1.53318 1.56766 0.95894 67 u - - > 1.38629 1.38629 1.38629 1.38629 0.03208 4.14879 4.14879 1.46634 0.26236 1.09861 0.40547 65 3.78696 0.14398 3.46900 2.52224 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.01617 4.13288 * 1.46634 0.26236 0.00000 * //