# STOCKHOLM 1.0
#=GF ID SNORD86
#=GF AC RF00594
#=GF DE Small nucleolar RNA SNORD86
#=GF AU Marantidis E
#=GF GA 35.0
#=GF NC 34.9
#=GF TC 35.1
#=GF PI snoU86
#=GF SE Marantidis E.
#=GF SS Predicted; RNAalifold
#=GF TP Gene; snRNA; snoRNA; CD-box;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 26.98 -Z 2958934 CM SEQDB
#=GF DR SO; 0000593; C_D_box_snoRNA;
#=GF DR GO; 0006396; RNA processing;
#=GF DR GO; 0005730; nucleolus;
#=GF DR snoopy; Mus_musculus300006;
#=GF DR snoopy; Loxodonta_africana300505;
#=GF RN [1]
#=GF RM 11594746
#=GF RT U86, a novel snoRNA with an unprecedented gene organization in yeast.
#=GF RA Filippini D, Renzi F, Bozzoni I, Caffarelli E
#=GF RL Biochem Biophys Res Commun. 2001;288:16-21.
#=GF RN [2]
#=GF RM 16381836
#=GF RT snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box
#=GF RT snoRNAs.
#=GF RA Lestrade L, Weber MJ
#=GF RL Nucleic Acids Res. 2006;34:D158-D162.
#=GF CC U86 belongs to the C/D family of snoRNAs. It is the human orthologue of
#=GF CC Xenopus laevis U86 and has no identified RNA target. The snoRNAs U86, U56,
#=GF CC U57 and HBII-55,of the C/D family, and the H/ACA box snoRNA ACA51 share
#=GF CC the same host gene (NOL5A) with U86.
#=GF WK Small_nucleolar_RNA_SNORD86
#=GF SQ 6

AJ311853.1/1-86           GAUCACGGUG--AUGGCUGACCAGGGCUCCCUGACCUAUACAGGCCUCUGCUAUGGGGGUGAUGGCCAGUCCUGGUGUCUGAGUGAUU
AL833804.16/187394-187479 GAUUACAAUG--AUGGCUGACCAGGGCAACCUGACCUAUACAGGCCUCUGCUAUGGGGGUGAUGGCCAGUCCUGGUGUCUGAGUGAUU
AY007719.1/710-795        GAUCACAGUG--AUGGUUGACCAGGGCUCCCUGACCUAUACAGGCCUCUGCUAUGGGGGUGAUGGCCAGUCCUGGUGUCUGAGUGAUU
AL663066.12/143691-143604 GAUAUUUAAGUCAUUUAACAUAUUUUGUUCUGGACCUAUACAGGCCUCUGCUAUGGGGGUGAUGUUCAGUCCUGGUGUCUGAGUGAUU
AC123851.4/99948-100029   UGCCUUUCAG--A----AGAAGAGGCGGACCUGACCUAUACAGGCCUCUGCUAUGGGGAUGAUGGCCAGUCCUGGUGUCUGAGUGAUU
AC154361.2/57260-57345    AUUUCAUCAG--AGAACACAAAAGAACAUUCUUAAAACUAAAUAGCUCUGCUAUGGGGGUGAUGGCCAGUCCUGGUGUCUGAGUGAUU
#=GC SS_cons              <<<<<<---<..<<-----<<<<<<<<<<<-<-<<<<---<<<<<____>>>->>->>>>->->>-->>>>>>>>>>>>--->>>>>>
#=GC RF                   gaucacuaaG..AuggcagAccaGgacucCCuGAcCuAUACAgGCCUCUGCuAUGGgGgUGaUGgCCagucCuggUgUCUGAgugauu
//
