INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD78 ACC RF00592 DESC Small nucleolar RNA SNORD78 STATES 199 NODES 67 CLEN 65 W 142 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:49:28 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 19 EFFN 4.448486 CKSUM 3216297707 NULL 0.000 0.000 0.000 0.000 GA 38.00 TC 38.20 NC 37.10 EFP7GF -8.7822 0.71882 ECMLC 0.63896 -9.37883 0.69117 1600000 747399 0.001606 ECMGC 0.35798 -17.52000 -1.80751 1600000 110888 0.003607 ECMLI 0.48553 -10.04407 2.07559 1600000 431275 0.002782 ECMGI 0.42565 -8.51775 3.45290 1600000 65302 0.006125 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 142 224 -7.727 -7.934 -0.106 -4.016 IL 1 1 2 1 4 1 27 144 226 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 26 144 225 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 1 26 142 224 -5.989 -0.046 -5.989 -0.474 -0.292 -0.550 0.832 D 4 2 3 5 3 0 22 140 222 -12.549 -0.586 -1.583 IL 5 5 3 5 3 2 27 149 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 25 141 223 -6.055 -0.044 -6.055 -2.659 -2.161 -2.852 1.799 D 7 5 3 8 3 0 20 138 219 -11.551 -1.585 -0.585 IL 8 8 3 8 3 2 26 148 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 24 140 221 -6.055 -0.044 -6.055 -0.219 -2.318 1.425 -1.971 D 10 8 3 11 3 0 20 137 218 -11.551 -1.585 -0.585 IL 11 11 3 11 3 2 26 147 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - u - - - ML 12 11 3 14 3 1 23 138 220 -6.055 -0.044 -6.055 -0.503 -0.105 -1.240 0.957 D 13 11 3 14 3 0 19 135 216 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 25 145 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 23 137 218 -6.055 -0.044 -6.055 1.882 -3.441 -3.112 -3.238 D 16 14 3 17 3 0 18 134 215 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 24 144 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 22 136 217 -6.055 -0.044 -6.055 1.882 -3.441 -3.112 -3.238 D 19 17 3 20 3 0 18 133 214 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 23 143 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 21 135 216 -6.055 -0.044 -6.055 -2.659 -2.161 -2.852 1.799 D 22 20 3 23 3 0 17 132 212 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 22 141 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 20 133 214 -6.055 -0.044 -6.055 -1.076 -2.778 1.677 -2.456 D 25 23 3 26 3 0 16 130 211 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 22 140 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 19 132 213 -6.055 -0.044 -6.055 1.882 -3.441 -3.112 -3.238 D 28 26 3 29 3 0 16 129 209 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 21 139 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 18 131 211 -6.055 -0.044 -6.055 -2.659 -2.161 -2.852 1.799 D 31 29 3 32 3 0 15 128 208 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 20 138 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 1 17 129 210 -6.055 -0.044 -6.055 -2.468 -3.507 1.858 -3.234 D 34 32 3 35 3 0 14 127 207 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 19 136 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 36 35 3 38 3 1 16 128 208 -6.055 -0.178 -3.307 -1.918 -1.723 -1.320 1.600 D 37 35 3 38 3 0 14 126 206 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 18 135 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 39 38 3 41 3 1 16 127 207 -5.925 -0.048 -5.925 -2.385 -1.933 -2.571 1.756 D 40 38 3 41 3 0 13 125 205 -13.090 -0.376 -2.124 IL 41 41 3 41 3 1 17 134 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - G - - - ML 42 41 3 44 3 1 15 126 206 -6.055 -0.126 -3.872 -1.153 -0.385 1.147 -0.813 D 43 41 3 44 3 0 11 123 203 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 17 133 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - a - - - ML 45 44 3 47 3 1 15 124 204 -5.976 -0.047 -5.976 0.977 -0.429 -1.122 -0.270 D 46 44 3 47 3 0 11 122 202 -12.676 -0.527 -1.710 IL 47 47 3 47 3 1 16 131 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - U - - - ML 48 47 3 50 3 1 14 123 203 -6.055 -0.044 -6.055 -0.709 -0.592 -0.866 1.122 D 49 47 3 50 3 0 9 120 199 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 15 130 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - C - - - ML 51 50 3 53 3 1 13 122 201 -6.055 -0.044 -6.055 -2.904 1.819 -3.150 -2.142 D 52 50 3 53 3 0 8 119 198 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 15 129 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 54 53 3 56 3 1 13 121 200 -6.055 -0.044 -6.055 1.694 -2.566 -1.364 -2.276 D 55 53 3 56 3 0 8 117 197 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 14 128 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - A - - - ML 57 56 3 59 3 1 12 119 198 -6.055 -0.044 -6.055 1.882 -3.441 -3.112 -3.238 D 58 56 3 59 3 0 7 116 195 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 13 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 60 59 3 62 3 1 11 118 197 -6.055 -0.044 -6.055 1.882 -3.441 -3.112 -3.238 D 61 59 3 62 3 0 6 115 194 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 13 125 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 63 62 3 65 3 1 11 117 196 -6.055 -0.044 -6.055 -2.659 -2.161 -2.852 1.799 D 64 62 3 65 3 0 6 113 192 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 12 124 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - G - - - ML 66 65 3 68 3 1 10 115 194 -6.055 -0.044 -6.055 -1.234 -2.859 1.707 -2.544 D 67 65 3 68 3 0 5 112 191 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 12 122 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - U - - - ML 69 68 3 71 3 1 9 114 193 -6.055 -0.044 -6.055 -2.659 -2.161 -2.852 1.799 D 70 68 3 71 3 0 4 111 189 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 11 121 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - C - - - ML 72 71 3 74 3 1 9 113 191 -6.055 -0.044 -6.055 -2.904 1.819 -3.150 -2.142 D 73 71 3 74 3 0 4 109 188 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 10 120 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - U - - - ML 75 74 3 77 3 1 8 111 190 -6.055 -0.044 -6.055 -2.659 -2.161 -2.852 1.799 D 76 74 3 77 3 0 3 108 186 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 10 119 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - G - - - ML 78 77 3 80 3 1 8 110 188 -6.055 -0.044 -6.055 -1.738 -2.529 1.679 -1.626 D 79 77 3 80 3 0 3 107 185 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 9 117 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - A - - - ML 81 80 3 83 3 1 7 109 187 -6.055 -0.044 -6.055 1.693 -2.563 -1.359 -2.273 D 82 80 3 83 3 0 2 105 183 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 9 116 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - C - - - ML 84 83 3 86 3 1 7 107 185 -6.055 -0.044 -6.055 -1.952 1.527 -1.474 -0.999 D 85 83 3 86 3 0 2 104 182 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 8 115 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - C - - - ML 87 86 3 89 3 1 6 106 184 -6.055 -0.044 -6.055 -2.483 1.673 -2.746 -1.051 D 88 86 3 89 3 0 1 103 180 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 7 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - U - - - ML 90 89 3 92 3 1 5 104 182 -6.055 -0.044 -6.055 -1.930 -1.730 -1.342 1.605 D 91 89 3 92 3 0 1 101 179 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 7 112 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - G - - - ML 93 92 3 95 3 1 5 103 180 -6.055 -0.044 -6.055 -0.869 -2.670 1.631 -2.341 D 94 92 3 95 3 0 1 100 177 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 6 111 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - A - - - ML 96 95 3 98 3 1 4 102 179 -6.055 -0.044 -6.055 1.882 -3.441 -3.112 -3.238 D 97 95 3 98 3 0 0 99 175 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 5 109 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - A - - - ML 99 98 3 101 3 1 4 100 177 -6.055 -0.044 -6.055 1.882 -3.441 -3.112 -3.238 D 100 98 3 101 3 0 0 97 174 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 5 108 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - A - - - ML 102 101 3 104 3 1 3 99 176 -6.055 -0.044 -6.055 1.292 -1.911 -0.077 -1.567 D 103 101 3 104 3 0 0 96 173 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 4 107 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - u - - - ML 105 104 3 107 3 1 2 98 174 -6.055 -0.113 -4.058 -0.272 -0.438 -0.657 0.848 D 106 104 3 107 3 0 0 95 171 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 4 105 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - g - - - ML 108 107 3 110 3 1 2 96 173 -5.989 -0.046 -5.989 -0.332 -0.825 0.803 -0.159 D 109 107 3 110 3 0 0 94 170 -12.549 -0.586 -1.583 IL 110 110 3 110 3 1 3 104 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - A - - - ML 111 110 3 113 3 1 2 95 171 -6.055 -0.044 -6.055 1.570 -1.884 -2.010 -0.969 D 112 110 3 113 3 0 0 92 168 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 3 103 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - G - - - ML 114 113 3 116 3 1 2 93 170 -6.055 -0.044 -6.055 -0.524 -0.635 1.033 -0.701 D 115 113 3 116 3 0 0 90 166 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 3 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - C - - - ML 117 116 3 119 3 1 1 92 168 -6.055 -0.044 -6.055 -1.966 1.298 -2.184 0.091 D 118 116 3 119 3 0 0 89 165 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 2 100 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - A - - - ML 120 119 3 122 3 1 1 91 166 -3.872 -0.126 -6.055 1.375 -1.493 -1.019 -0.841 D 121 119 3 122 3 0 0 88 163 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 2 91 166 -4.249 -0.078 -11.893 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - U - - - ML 123 122 3 125 3 1 1 89 165 -6.055 -0.044 -6.055 -2.659 -2.161 -2.852 1.799 D 124 122 3 125 3 0 0 86 162 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 2 97 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - G - - - ML 126 125 3 128 3 1 1 88 164 -6.055 -0.044 -6.055 -1.234 -2.859 1.707 -2.544 D 127 125 3 128 3 0 0 85 160 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 2 96 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - U - - - ML 129 128 3 131 3 1 1 87 162 -6.055 -0.044 -6.055 -2.659 -2.161 -2.852 1.799 D 130 128 3 131 3 0 0 83 158 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 95 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - A - - - ML 132 131 3 134 3 1 1 85 160 -6.055 -0.044 -6.055 1.360 -1.472 -0.983 -0.819 D 133 131 3 134 3 0 0 82 156 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 93 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - G - - - ML 135 134 3 137 3 1 1 84 159 -6.055 -0.044 -6.055 -2.468 -3.507 1.858 -3.234 D 136 134 3 137 3 0 0 80 155 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - A - - - ML 138 137 3 140 3 1 1 82 157 -6.055 -0.044 -6.055 1.882 -3.441 -3.112 -3.238 D 139 137 3 140 3 0 0 79 153 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - C - - - ML 141 140 3 143 3 1 1 81 155 -6.055 -0.044 -6.055 -1.075 1.280 -1.785 -0.310 D 142 140 3 143 3 0 0 77 151 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 89 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - A - - - ML 144 143 3 146 3 1 1 79 153 -6.055 -0.044 -6.055 1.234 -0.825 -1.370 -0.524 D 145 143 3 146 3 0 0 76 150 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 88 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - A - - - ML 147 146 3 149 3 1 1 78 152 -1.673 -0.631 -4.617 1.268 -1.341 -0.933 -0.571 D 148 146 3 149 3 0 0 74 148 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 2 78 152 -1.273 -0.771 -15.052 0.000 0.000 0.000 0.000 [ MATL 50 ] 55 - a - - - ML 150 149 3 152 3 1 1 76 150 -6.017 -0.045 -6.017 0.604 -0.999 -0.113 0.077 D 151 149 3 152 3 0 0 73 147 -12.201 -0.798 -1.236 IL 152 152 3 152 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 56 - u - - - ML 153 152 3 155 3 1 1 74 148 -6.055 -0.044 -6.055 -0.931 -0.300 -0.160 0.822 D 154 152 3 155 3 0 0 71 144 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 57 - U - - - ML 156 155 3 158 3 1 1 73 146 -6.055 -0.181 -3.285 -0.477 -0.787 -0.832 1.098 D 157 155 3 158 3 0 0 70 143 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 58 - U - - - ML 159 158 3 161 3 1 1 71 145 -5.923 -0.048 -5.923 -1.820 -0.779 -2.025 1.530 D 160 158 3 161 3 0 0 68 141 -13.107 -1.732 -0.517 IL 161 161 3 161 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 59 - A - - - ML 162 161 3 164 3 1 1 70 143 -5.962 -0.047 -5.962 1.021 -1.089 -0.621 -0.235 D 163 161 3 164 3 0 0 67 140 -12.807 -0.472 -1.841 IL 164 164 3 164 3 1 1 79 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 60 - a - - - ML 165 164 3 167 3 1 1 68 141 -6.055 -0.044 -6.055 0.754 -0.704 -0.122 -0.357 D 166 164 3 167 3 0 0 64 136 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 61 - c - - - ML 168 167 3 170 3 1 1 66 139 -6.055 -0.044 -6.055 -1.741 0.877 -1.941 0.681 D 169 167 3 170 3 0 0 62 134 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 62 - A - - - ML 171 170 3 173 3 1 1 64 136 -6.055 -0.044 -6.055 1.046 -1.148 -0.561 -0.313 D 172 170 3 173 3 0 0 60 132 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 63 - C - - - ML 174 173 3 176 3 1 1 63 134 -6.055 -0.044 -6.055 -2.904 1.819 -3.150 -2.142 D 175 173 3 176 3 0 0 58 130 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 64 - U - - - ML 177 176 3 179 3 1 1 61 132 -6.055 -0.044 -6.055 -2.659 -2.161 -2.852 1.799 D 178 176 3 179 3 0 0 56 127 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 65 - G - - - ML 180 179 3 182 3 1 1 59 130 -6.055 -0.044 -6.055 -2.468 -3.507 1.858 -3.234 D 181 179 3 182 3 0 0 54 124 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 66 - A - - - ML 183 182 3 185 3 1 1 56 127 -6.055 -0.044 -6.055 1.882 -3.441 -3.112 -3.238 D 184 182 3 185 3 0 0 51 121 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 67 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 67 - A - - - ML 186 185 3 188 3 1 1 54 124 -6.055 -0.113 -4.058 1.882 -3.441 -3.112 -3.238 D 187 185 3 188 3 0 0 48 118 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 68 - G - - - ML 189 188 3 191 3 1 1 51 121 -5.989 -0.046 -5.989 -0.411 -2.327 1.483 -1.984 D 190 188 3 191 3 0 0 41 110 -12.549 -2.583 -0.264 IL 191 191 3 191 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 69 - A - - - ML 192 191 3 194 3 1 1 47 117 -5.989 -0.046 -5.989 1.263 -1.315 -0.864 -0.627 D 193 191 3 194 3 0 0 29 99 -12.549 -0.586 -1.583 IL 194 194 3 194 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 70 - A - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 1.405 -2.016 -0.336 -1.681 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 66 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD78 ACC RF00592 DESC Small nucleolar RNA SNORD78 LENG 65 MAXL 142 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Feb 20 18:49:28 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 19 EFFN 4.448486 STATS LOCAL MSV -7.9606 0.71882 STATS LOCAL VITERBI -8.7279 0.71882 STATS LOCAL FORWARD -3.6358 0.71882 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.10897 1.78133 1.51700 1.26472 1.38629 1.38629 1.38629 1.38629 0.06923 5.35561 2.77787 0.39730 1.11515 0.00000 * 1 1.71495 1.58861 1.76765 0.80949 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03201 4.15094 4.15094 1.46634 0.26236 0.40619 1.09715 2 3.22952 2.88394 3.36303 0.13940 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 3 1.53808 2.99281 0.39857 2.75233 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 4 1.73510 1.45878 2.24589 0.72306 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 5 0.08167 3.77155 3.54367 3.63071 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 6 0.08167 3.77155 3.54367 3.63071 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 7 3.22952 2.88394 3.36303 0.13940 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 8 2.13242 3.31176 0.22383 3.08901 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 9 0.08167 3.77155 3.54367 3.63071 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 10 3.22952 2.88394 3.36303 0.13940 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 11 3.09695 3.81685 0.09844 3.62796 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 12 2.71546 2.58067 2.30152 0.27708 - U - - : 1.38629 1.38629 1.38629 1.38629 0.12336 4.19697 2.29252 1.46634 0.26236 1.09861 0.40547 13 3.03936 2.72608 3.16816 0.16892 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03347 4.10708 4.10708 1.46634 0.26236 0.26068 1.47199 14 2.18556 1.65289 0.59094 1.94995 - G - - : 1.38629 1.38629 1.38629 1.38629 0.08702 4.19697 2.68384 1.46634 0.26236 1.09861 0.40547 15 0.70917 1.68369 2.16399 1.57313 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03229 4.14224 4.14224 1.46634 0.26236 0.36495 1.18493 16 1.87785 1.79644 1.98635 0.60881 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 17 3.39923 0.12577 3.56984 2.87132 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 18 0.21191 3.16488 2.33171 2.96393 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 19 0.08167 3.77155 3.54367 3.63071 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 20 0.08167 3.77155 3.54367 3.63071 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 21 3.22952 2.88394 3.36303 0.13940 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 22 2.24194 3.36823 0.20280 3.14986 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 23 3.22952 2.88394 3.36303 0.13940 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 24 3.39923 0.12577 3.56984 2.87132 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 25 3.22952 2.88394 3.36303 0.13940 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 26 2.59113 3.13896 0.22224 2.51319 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 27 0.21262 3.16279 2.32798 2.96164 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 28 2.73900 0.32809 2.40784 2.07900 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 29 3.10751 0.22645 3.28959 2.11475 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 30 2.72384 2.58551 2.31676 0.27387 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 31 1.98845 3.23725 0.25555 3.00918 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 32 0.08167 3.77155 3.54367 3.63071 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 33 0.08167 3.77155 3.54367 3.63071 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 34 0.49074 2.71094 1.43968 2.47278 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 35 1.57477 1.68993 1.84162 0.79884 - u - - : 1.38629 1.38629 1.38629 1.38629 0.07804 4.19697 2.81287 1.46634 0.26236 1.09861 0.40547 36 1.61645 1.95784 0.82935 1.49654 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03201 4.15094 4.15094 1.46634 0.26236 0.40619 1.09715 37 0.29779 2.69226 2.77935 2.05780 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 38 1.74948 1.82669 0.67053 1.87241 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 39 2.74910 0.48675 2.89998 1.32288 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 40 0.43349 2.42117 2.09266 1.96911 - A - - : 1.38629 1.38629 1.38629 1.38629 0.08702 2.68384 4.19697 0.05405 2.94469 1.09861 0.40547 41 3.22952 2.88394 3.36303 0.13940 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 42 2.24194 3.36823 0.20280 3.14986 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 43 3.22952 2.88394 3.36303 0.13940 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 44 0.44360 2.40673 2.06766 1.95414 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 45 3.09695 3.81685 0.09844 3.62796 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 46 0.08167 3.77155 3.54367 3.63071 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 47 2.13164 0.49903 2.62327 1.60110 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 48 0.53062 1.95797 2.33578 1.74939 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 49 0.50739 2.31564 2.03288 1.78215 - A - - : 1.38629 1.38629 1.38629 1.38629 0.43758 1.15943 3.20059 0.53414 0.88231 1.09861 0.40547 50 0.96749 2.07904 1.46428 1.33305 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03136 4.17094 4.17094 1.46634 0.26236 0.55298 0.85622 51 2.03181 1.59397 1.49728 0.81634 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 52 1.71727 1.93184 1.96326 0.62519 - U - - : 1.38629 1.38629 1.38629 1.38629 0.12518 4.19697 2.27674 1.46634 0.26236 1.09861 0.40547 53 2.64756 1.92606 2.78994 0.32569 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03353 4.10532 4.10532 1.46634 0.26236 1.20016 0.35831 54 0.67852 2.14094 1.81648 1.54885 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03262 4.13227 4.13227 1.46634 0.26236 0.32727 1.27616 55 0.86364 1.87412 1.47098 1.63380 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 56 2.59277 0.77829 2.73169 0.91407 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 57 0.66093 2.18190 1.77491 1.60295 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 58 3.39923 0.12577 3.56984 2.87132 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 59 3.22952 2.88394 3.36303 0.13940 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 60 3.09695 3.81685 0.09844 3.62796 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 61 0.08167 3.77155 3.54367 3.63071 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03054 4.19697 4.19697 1.46634 0.26236 1.09861 0.40547 62 0.08167 3.77155 3.54367 3.63071 - A - - : 1.38629 1.38629 1.38629 1.38629 0.07804 4.19697 2.81287 1.46634 0.26236 1.09861 0.40547 63 1.67133 2.99943 0.35809 2.76175 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03201 4.15094 4.15094 1.46634 0.26236 1.79030 0.18261 64 0.51054 2.29751 1.98489 1.82061 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03201 4.15094 4.15094 1.46634 0.26236 0.40619 1.09715 65 0.41220 2.78394 1.61932 2.55128 - A - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99936 0.00000 * //