INFERNAL1/a [1.1.4 | Dec 2020] NAME Prion_pknot ACC RF00523 DESC Prion pseudoknot STATES 124 NODES 36 CLEN 40 W 74 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:44:21 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 148 EFFN 14.114380 CKSUM 2070609849 NULL 0.000 0.000 0.000 0.000 GA 39.00 TC 39.00 NC 38.90 EFP7GF -17.3875 0.71963 ECMLC 0.53205 -11.45070 1.48872 1600000 1172287 0.001024 ECMGC 0.37383 -25.08009 -4.85483 1600000 768522 0.000520 ECMLI 0.52113 -10.23017 2.15797 1600000 763647 0.001571 ECMGI 0.37505 -24.03306 -3.71523 1600000 815594 0.000490 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 74 113 -8.927 -10.173 -0.019 -6.626 IL 1 1 2 1 4 1 1 76 114 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 1 76 115 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 54 - G - - MR 3 2 3 5 3 1 4 74 113 -10.356 -0.005 -8.673 -3.287 -1.679 1.814 -3.844 D 4 2 3 5 3 0 0 72 111 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 1 75 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 53 - G - - MR 6 5 3 8 3 1 4 73 112 -10.356 -0.005 -8.673 -2.520 -2.951 1.857 -3.739 D 7 5 3 8 3 0 0 71 110 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 1 74 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 52 - U - - MR 9 8 3 11 3 1 3 72 111 -10.356 -0.005 -8.673 -1.968 -2.968 -2.882 1.799 D 10 8 3 11 3 0 0 70 109 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 1 73 112 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 51 - C - - MR 12 11 3 14 3 1 3 71 110 -10.356 -0.005 -8.673 -2.351 1.624 -3.890 -0.611 D 13 11 3 14 3 0 0 69 108 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 1 72 111 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 50 - G - - MR 15 14 3 17 3 1 2 70 109 -10.356 -0.005 -8.673 -4.756 -6.369 1.974 -5.493 D 16 14 3 17 3 0 0 68 107 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 1 71 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 49 - G - - MR 18 17 3 20 3 1 2 69 108 -10.356 -0.005 -8.673 -2.233 -5.274 1.896 -4.655 D 19 17 3 20 3 0 0 67 106 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 1 70 109 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 48 - U - - MR 21 20 3 23 3 1 1 68 107 -10.356 -0.034 -5.487 -0.008 -0.802 -2.085 1.135 D 22 20 3 23 3 0 0 66 105 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 1 69 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 47 - G - - MR 24 23 3 26 3 1 1 67 106 -10.327 -0.005 -8.645 -4.725 -6.333 1.973 -5.461 D 25 23 3 26 3 0 0 64 103 -7.123 -2.300 -0.340 IR 26 26 3 26 3 1 1 68 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 46 - G - - MR 27 26 3 29 3 1 1 66 105 -10.327 -0.005 -8.645 -4.725 -6.333 1.973 -5.461 D 28 26 3 29 3 0 0 63 102 -7.123 -2.300 -0.340 IR 29 29 3 29 3 1 1 67 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 45 - U - - MR 30 29 3 32 5 1 1 65 104 -2.264 -0.346 -8.808 -9.020 -9.912 -0.354 -1.140 -1.772 1.305 D 31 29 3 32 5 0 0 62 100 -5.807 -0.479 -3.434 -4.864 -2.859 IR 32 32 3 32 5 1 1 67 106 -0.731 -1.382 -8.821 -6.989 -8.095 0.000 0.000 0.000 0.000 [ MATP 11 ] 1 41 C G - - MP 33 32 3 37 6 2 2 62 100 -10.322 -10.261 -0.009 -9.038 -9.317 -9.712 -5.149 -5.220 -1.742 -1.619 -4.080 -5.652 3.182 -2.266 -5.089 -1.535 0.031 -3.379 -0.500 -5.327 1.876 -4.019 ML 34 32 3 37 6 1 1 60 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 3 37 6 1 1 60 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 3 37 6 0 0 56 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 1 61 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 1 61 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 2 40 C G - - MP 39 38 6 43 6 2 2 60 98 -10.322 -10.261 -0.009 -9.038 -9.317 -9.712 -7.356 -7.532 -6.591 -3.761 -4.960 -6.693 3.852 -6.004 -6.809 -3.741 -0.242 -5.762 -1.812 -7.236 -2.804 -5.614 ML 40 38 6 43 6 1 1 58 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 58 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 54 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 59 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 59 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 3 39 A U - - MP 45 44 6 49 6 2 2 58 96 -10.322 -10.261 -0.009 -9.038 -9.317 -9.712 -5.899 0.985 -6.086 3.561 -8.160 -9.179 -3.611 -6.141 -5.663 -0.024 -6.326 -0.119 -3.561 -7.326 -5.452 -4.694 ML 46 44 6 49 6 1 1 56 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 56 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 53 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 57 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 57 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 4 38 u a - - MP 51 50 6 55 6 2 2 56 94 -10.322 -10.261 -0.009 -9.038 -9.317 -9.712 -2.540 -3.481 -3.500 0.497 0.637 -4.319 0.729 -3.627 0.580 -0.228 -4.076 -1.860 2.887 -3.660 -0.802 -2.618 ML 52 50 6 55 6 1 1 54 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 54 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 51 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 55 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 55 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 5 37 G C - - MP 57 56 6 61 6 2 2 54 92 -10.322 -10.261 -0.065 -4.661 -9.317 -9.712 -7.517 -0.950 -8.283 -1.971 -9.008 -6.086 -3.678 -8.485 -6.140 3.867 -6.372 -1.304 -3.982 -6.376 -5.934 -7.158 ML 58 56 6 61 6 1 1 53 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 52 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 50 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 53 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 53 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 6 36 G C - - MP 63 62 6 67 4 2 2 52 90 -9.029 -9.236 -0.012 -7.650 -5.353 -3.821 -5.291 -0.121 -6.454 -5.644 -1.545 -5.850 -0.164 3.372 -2.260 1.411 -1.796 -5.094 -3.558 -4.204 ML 64 62 6 67 4 1 1 52 90 -0.990 -4.839 -1.406 -3.569 1.384 -1.397 -1.123 -0.861 MR 65 62 6 67 4 1 1 50 88 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 0 49 87 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 1 52 90 -1.194 -3.955 -1.038 -6.441 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 1 51 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 9 - U - - - ML 69 68 6 71 3 1 1 50 88 -10.039 -0.005 -8.693 -0.036 -1.093 -1.942 1.199 D 70 68 6 71 3 0 0 47 85 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 1 50 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 10 - G - - - ML 72 71 3 74 3 1 1 49 87 -10.039 -0.005 -8.693 -4.756 -6.369 1.974 -5.493 D 73 71 3 74 3 0 0 46 84 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 1 49 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 11 - G - - - ML 75 74 3 77 3 1 1 48 86 -3.643 -0.124 -8.693 -4.756 -6.369 1.974 -5.493 D 76 74 3 77 3 0 0 45 83 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 1 50 88 -0.794 -1.300 -5.874 0.000 0.000 0.000 0.000 [ MATL 20 ] 15 - U - - - ML 78 77 3 80 3 1 1 45 83 -10.039 -0.005 -8.693 -0.922 -0.070 -1.887 1.169 D 79 77 3 80 3 0 0 43 81 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 1 46 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 16 - G - - - ML 81 80 3 83 3 1 1 44 82 -10.039 -0.005 -8.693 -2.850 -5.642 1.929 -4.952 D 82 80 3 83 3 0 0 41 79 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 1 45 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 17 - G - - - ML 84 83 3 86 3 1 1 43 81 -2.616 -0.261 -8.693 -4.756 -6.369 1.974 -5.493 D 85 83 3 86 3 0 0 38 75 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 1 46 84 -0.702 -1.414 -6.668 0.000 0.000 0.000 0.000 [ MATL 23 ] 21 - C - - - ML 87 86 3 89 3 1 1 35 66 -10.039 -0.005 -8.693 -3.278 1.865 -4.638 -2.224 D 88 86 3 89 3 0 0 33 64 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 36 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 22 - U - - - ML 90 89 3 92 3 1 1 34 65 -10.039 -0.005 -8.693 -3.934 -2.814 -4.677 1.908 D 91 89 3 92 3 0 0 32 63 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 35 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 23 - G - - - ML 93 92 3 95 3 1 1 33 64 -10.039 -0.005 -8.693 -4.756 -6.369 1.974 -5.493 D 94 92 3 95 3 0 0 31 62 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 34 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 24 - G - - - ML 96 95 3 98 3 1 1 32 63 -10.039 -0.005 -8.693 -4.756 -6.369 1.974 -5.493 D 97 95 3 98 3 0 0 30 61 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 33 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 25 - G - - - ML 99 98 3 101 3 1 1 31 62 -10.039 -0.005 -8.693 -4.756 -6.369 1.974 -5.493 D 100 98 3 101 3 0 0 29 60 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 32 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 26 - G - - - ML 102 101 3 104 3 1 1 30 61 -4.131 -0.103 -6.369 -4.756 -6.369 1.974 -5.493 D 103 101 3 104 3 0 0 26 58 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 34 65 -0.852 -1.235 -5.546 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - a - - - ML 105 104 3 107 3 1 1 17 36 -10.025 -0.005 -8.679 0.386 -0.798 -0.287 0.377 D 106 104 3 107 3 0 0 17 36 -6.636 -2.149 -0.387 IL 107 107 3 107 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - C - - - ML 108 107 3 110 3 1 1 16 35 -10.025 -0.005 -8.679 -5.332 1.968 -5.822 -4.434 D 109 107 3 110 3 0 0 16 35 -6.636 -2.149 -0.387 IL 110 110 3 110 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - A - - - ML 111 110 3 113 3 1 1 15 33 -10.025 -0.005 -8.679 1.952 -5.231 -3.789 -5.009 D 112 110 3 113 3 0 0 15 34 -6.636 -2.149 -0.387 IL 113 113 3 113 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - G - - - ML 114 113 3 116 3 1 1 13 32 -10.025 -0.005 -8.679 -1.194 -4.576 1.791 -4.061 D 115 113 3 116 3 0 0 14 33 -6.636 -2.149 -0.387 IL 116 116 3 116 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - C - - - ML 117 116 3 119 3 1 1 12 30 -10.025 -0.005 -8.679 -5.332 1.968 -5.822 -4.434 D 118 116 3 119 3 0 0 13 31 -6.636 -2.149 -0.387 IL 119 119 3 119 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - C - - - ML 120 119 3 122 2 1 1 1 1 * 0.000 -4.973 1.945 -5.457 -3.407 D 121 119 3 122 2 0 0 0 0 * 0.000 IL 122 122 3 122 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 35 ] - - - - - - E 123 122 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME Prion_pknot ACC RF00523 DESC Prion pseudoknot LENG 40 MAXL 103 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:44:22 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 148 EFFN 16.788208 CKSUM 2070609849 STATS LOCAL MSV -7.0252 0.71963 STATS LOCAL VITERBI -7.8646 0.71963 STATS LOCAL FORWARD -3.9384 0.71963 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 2.09243 1.46828 0.75932 1.72425 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 0.00000 * 1 3.35246 0.50671 2.44636 1.28765 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 2 4.92560 0.11299 2.65779 3.52393 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 3 0.13987 5.10452 2.15978 4.69819 3 A - - < 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 4 2.32934 1.60760 1.83046 0.61261 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 5 3.02449 5.16010 0.06224 5.11247 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 6 2.50072 3.83180 0.13928 3.63745 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.06256 2.88509 5.33989 0.75354 0.63619 1.09861 0.40547 7 1.41283 2.17933 2.81146 0.53903 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 8 4.84294 5.98478 0.01524 5.35587 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 9 4.84294 5.98478 0.01524 5.35586 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.09396 2.46648 5.33989 1.11391 0.39790 1.09861 0.40547 10 2.06798 1.43016 2.75291 0.56116 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 11 3.39466 5.50055 0.04537 5.00313 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 12 4.84294 5.98478 0.01524 5.35587 17 G - - _ 1.38629 1.38629 1.38629 1.38629 0.19093 1.77776 5.33989 1.10624 0.40167 1.09861 0.40547 13 3.72911 0.08721 4.73715 2.98115 21 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 14 4.27184 3.40235 4.78620 0.05720 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 15 4.84294 5.98478 0.01524 5.35586 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 16 4.84294 5.98478 0.01524 5.35587 24 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 17 4.84294 5.98478 0.01524 5.35587 25 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 18 4.84294 5.98478 0.01524 5.35586 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.07927 2.78700 4.22646 1.11981 0.39503 1.09861 0.40547 19 1.11538 1.96075 1.58075 1.12198 30 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00974 5.33004 5.33004 1.46634 0.26236 1.61836 0.22093 20 5.24861 0.01898 5.57547 4.62942 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00974 5.33004 5.33004 1.46634 0.26236 1.61836 0.22093 21 0.02914 5.20230 4.09035 5.03799 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00974 5.33004 5.33004 1.46634 0.26236 1.61836 0.22093 22 2.21918 4.75127 0.13900 4.38764 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00974 5.33004 5.33004 1.46634 0.26236 1.61836 0.22093 23 5.24861 0.01898 5.57547 4.62942 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00974 5.33004 5.33004 1.46634 0.26236 1.61836 0.22093 24 4.98569 0.03419 5.30085 3.82631 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.06320 5.33004 2.87523 1.46634 0.26236 0.50492 0.92521 25 2.57083 0.41245 3.31937 1.49019 36 C - - > 1.38629 1.38629 1.38629 1.38629 0.01016 5.28749 5.28749 1.46634 0.26236 0.15851 1.92017 26 5.16876 0.05285 5.04632 3.23507 37 C - - > 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 27 0.32448 2.98972 2.09281 2.26864 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 28 4.82306 1.69632 4.84551 0.22222 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 29 3.80876 4.98912 0.03892 4.68978 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 30 3.25945 4.06669 0.09269 3.41190 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.27691 1.52945 3.68015 1.10455 0.40251 1.09861 0.40547 31 1.64269 2.21245 2.67027 0.46541 45 U - - : 1.38629 1.38629 1.38629 1.38629 0.00984 5.31926 5.31926 1.46634 0.26236 1.98210 0.14824 32 4.82191 5.96071 0.01557 5.33446 46 G - - : 1.38629 1.38629 1.38629 1.38629 0.00984 5.31926 5.31926 1.46634 0.26236 1.98210 0.14824 33 4.82191 5.96071 0.01557 5.33446 47 G - - : 1.38629 1.38629 1.38629 1.38629 0.00984 5.31926 5.31926 1.46634 0.26236 0.32236 1.28895 34 1.39349 1.96437 2.92911 0.58321 48 U - - : 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 35 2.95287 5.24627 0.06793 4.80204 49 G - - : 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 36 4.84294 5.98478 0.01524 5.35587 50 G - - : 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 37 3.08888 0.25012 4.22236 1.82589 51 C - - : 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 38 2.78457 3.57917 3.43224 0.13007 52 U - - : 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 39 3.21099 3.45542 0.09210 4.12939 53 G - - : 1.38629 1.38629 1.38629 1.38629 0.00964 5.33989 5.33989 1.46634 0.26236 1.09861 0.40547 40 3.87918 2.53387 0.12108 4.26739 54 G - - : 1.38629 1.38629 1.38629 1.38629 0.00483 5.33509 * 1.46634 0.26236 0.00000 * //