INFERNAL1/a [1.1.4 | Dec 2020] NAME serC ACC RF00517 DESC serC leader STATES 165 NODES 46 CLEN 52 W 67 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:44:06 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 70 EFFN 7.745972 CKSUM 2739045993 NULL 0.000 0.000 0.000 0.000 GA 35.00 TC 35.90 NC 34.40 EFP7GF -16.0207 0.71930 ECMLC 0.76808 -7.34370 1.18194 1600000 837715 0.001432 ECMGC 0.39381 -20.32656 -5.95863 1600000 114655 0.003489 ECMLI 0.60336 -8.68544 1.60259 1600000 595667 0.002015 ECMGI 0.42386 -16.76803 -3.90029 1600000 93493 0.004278 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 67 86 -8.355 -8.562 -0.020 -6.976 IL 1 1 2 1 4 1 18 71 91 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 1 18 67 86 -9.306 -0.008 -7.960 -0.215 0.987 -1.544 -0.298 D 4 2 3 5 3 0 12 66 85 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 16 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - g - - - ML 6 5 3 8 3 1 17 66 85 -9.306 -0.008 -7.960 -0.050 -0.682 0.966 -1.131 D 7 5 3 8 3 0 11 65 84 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 16 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 16 65 84 -9.306 -0.008 -7.960 -1.201 -2.323 1.615 -1.728 D 10 8 3 11 3 0 10 64 83 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 15 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - u - - - ML 12 11 3 14 3 1 15 64 83 -9.306 -0.008 -7.960 -1.653 0.545 -2.160 1.000 D 13 11 3 14 3 0 10 63 82 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 14 66 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - G - - - ML 15 14 3 17 3 1 14 63 82 -9.306 -0.008 -7.960 -2.332 -3.962 1.847 -2.850 D 16 14 3 17 3 0 9 62 81 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 13 65 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 1 13 62 81 -9.306 -0.008 -7.960 -3.898 -5.382 1.952 -4.634 D 19 17 3 20 3 0 8 60 80 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 12 64 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 21 20 3 23 3 1 12 61 80 -9.306 -0.008 -7.960 -3.898 -5.382 1.952 -4.634 D 22 20 3 23 3 0 8 59 79 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 12 63 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 11 60 79 -9.306 -0.008 -7.960 1.529 -0.877 -2.417 -1.383 D 25 23 3 26 3 0 7 58 78 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 11 62 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - C - - - ML 27 26 3 29 3 1 10 59 78 -9.306 -0.008 -7.960 -2.141 1.726 -3.593 -1.391 D 28 26 3 29 3 0 7 57 77 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 10 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 30 29 3 32 3 1 9 57 76 -9.638 -0.008 -7.955 1.953 -4.838 -4.293 -4.555 D 31 29 3 32 3 0 6 56 75 -5.620 -0.734 -1.403 IL 32 32 3 32 3 1 9 58 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 55 - a - - MR 33 32 3 35 3 1 8 56 75 -9.638 -0.008 -7.955 0.572 -0.341 -0.781 0.192 D 34 32 3 35 3 0 5 55 74 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 8 57 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 54 - a - - MR 36 35 3 38 3 1 7 55 74 -9.638 -0.033 -5.528 0.589 -0.300 -0.670 0.077 D 37 35 3 38 3 0 4 54 73 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 7 56 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 53 - u - - MR 39 38 3 41 3 1 6 55 73 -9.612 -0.008 -7.930 0.065 -0.557 -0.209 0.495 D 40 38 3 41 3 0 4 53 72 -6.831 -2.009 -0.429 IR 41 41 3 41 3 1 6 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 52 - a - - MR 42 41 3 44 3 1 5 53 72 -9.612 -0.008 -7.930 0.947 -0.239 -0.902 -0.536 D 43 41 3 44 3 0 4 52 71 -6.831 -2.009 -0.429 IR 44 44 3 44 3 1 6 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 51 - c - - MR 45 44 3 47 2 1 4 52 71 -9.835 -0.002 0.215 0.624 -0.763 -0.497 D 46 44 3 47 2 0 3 52 71 -4.890 -0.050 IR 47 47 3 47 2 1 5 54 73 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 16 ] - - - - - - B 48 47 3 49 105 0 3 51 70 [ BEGL 17 ] - - - - - - S 49 48 1 50 4 0 0 32 50 -0.024 -7.709 -7.116 -7.756 [ MATP 18 ] 11 30 C G - - MP 50 49 1 54 6 2 2 32 50 -9.813 -9.752 -0.013 -8.528 -8.808 -9.203 -6.142 -6.075 -5.689 -2.130 -4.233 -6.004 3.810 -5.153 -5.779 -1.988 -5.915 -1.872 -0.733 -6.166 -1.371 -4.566 ML 51 49 1 54 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 52 49 1 54 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 53 49 1 54 6 0 0 28 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 54 54 5 54 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 55 55 6 55 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 12 29 C G - - MP 56 55 6 60 6 2 2 30 48 -9.813 -9.752 -0.013 -8.528 -8.808 -9.203 -4.812 -4.555 -4.692 -0.061 -3.530 -5.350 3.382 -4.224 -4.625 0.941 -5.046 -2.240 0.619 -4.963 -1.094 -3.403 ML 57 55 6 60 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 58 55 6 60 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 59 55 6 60 6 0 0 26 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 60 60 5 60 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 61 61 6 61 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 13 28 C G - - MP 62 61 6 66 6 2 2 28 46 -9.813 -5.388 -0.046 -8.528 -8.808 -9.203 -5.570 -5.571 -5.180 -1.618 -3.721 -5.538 3.137 -4.555 -5.200 -1.467 -5.463 -3.491 2.510 -5.568 -1.366 -3.986 ML 63 61 6 66 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 64 61 6 66 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 65 61 6 66 6 0 0 24 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 66 66 5 66 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 67 67 6 67 5 1 1 27 45 -2.696 -0.393 -6.207 -4.375 -5.481 0.000 0.000 0.000 0.000 [ MATP 21 ] 14 26 C G - - MP 68 67 6 72 6 2 2 26 44 -9.813 -9.752 -0.013 -8.528 -8.808 -9.203 -5.823 -5.899 -5.326 -1.991 -3.790 -5.600 3.585 -4.656 -5.376 -1.870 -5.585 -3.927 1.451 -5.764 -1.456 -4.165 ML 69 67 6 72 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 70 67 6 72 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 71 67 6 72 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 72 72 5 72 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 73 73 6 73 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 15 25 U A - - MP 74 73 6 78 6 2 2 24 42 -9.813 -9.752 -0.013 -8.528 -8.808 -9.203 -5.913 -6.036 -5.383 -2.174 -3.829 -5.628 1.231 -4.705 -5.446 -2.072 -5.637 -4.145 3.622 -5.836 -0.922 -4.236 ML 75 73 6 78 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 76 73 6 78 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 77 73 6 78 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 78 78 5 78 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 79 79 6 79 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 16 24 C G - - MP 80 79 6 84 4 2 2 22 40 -5.272 -8.562 -0.054 -6.976 -7.388 -7.529 -6.514 -3.751 -4.883 -6.557 3.935 -6.078 -6.867 -3.717 -6.589 -5.710 -1.869 -7.290 -2.881 -5.670 ML 81 79 6 84 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 82 79 6 84 4 1 1 22 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 83 79 6 84 4 0 0 21 39 -4.568 -4.250 -2.265 -0.520 IL 84 84 5 84 4 1 1 23 42 -2.025 -2.708 -0.801 -5.194 0.000 0.000 0.000 0.000 IR 85 85 6 85 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 18 - C - - - ML 86 85 6 88 3 1 1 18 36 -9.306 -0.008 -7.960 -4.465 1.941 -5.075 -3.538 D 87 85 6 88 3 0 0 18 36 -6.174 -1.687 -0.566 IL 88 88 3 88 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 19 - C - - - ML 89 88 3 91 3 1 1 17 35 -9.306 -0.008 -7.960 -4.465 1.941 -5.075 -3.538 D 90 88 3 91 3 0 0 17 35 -6.174 -1.687 -0.566 IL 91 91 3 91 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 20 - C - - - ML 92 91 3 94 3 1 1 15 34 -9.306 -0.008 -7.960 -3.966 1.894 -4.635 -2.474 D 93 91 3 94 3 0 0 16 34 -6.174 -1.687 -0.566 IL 94 94 3 94 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 21 - A - - - ML 95 94 3 97 3 1 1 14 32 -9.306 -0.008 -7.960 1.953 -4.838 -4.293 -4.555 D 96 94 3 97 3 0 0 15 33 -6.174 -1.687 -0.566 IL 97 97 3 97 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 22 - A - - - ML 98 97 3 100 3 1 1 12 31 -9.306 -0.008 -7.960 1.627 -0.880 -2.672 -2.246 D 99 97 3 100 3 0 0 13 32 -6.174 -1.687 -0.566 IL 100 100 3 100 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 23 - C - - - ML 101 100 3 103 2 1 1 1 1 * 0.000 -4.465 1.941 -5.075 -3.538 D 102 100 3 103 2 0 0 0 0 * 0.000 IL 103 103 3 103 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 30 ] - - - - - - E 104 103 3 -1 0 0 0 0 0 [ BEGR 31 ] - - - - - - S 105 48 1 106 3 0 0 32 51 -9.306 -0.008 -7.960 IL 106 106 2 106 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - C - - - ML 107 106 2 109 3 1 1 32 51 -9.306 -0.008 -7.960 -1.859 1.796 -3.931 -2.418 D 108 106 2 109 3 0 0 31 50 -6.174 -1.687 -0.566 IL 109 109 3 109 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 32 - g - - - ML 110 109 3 112 3 1 1 31 50 -9.306 -0.008 -7.960 0.372 -1.435 0.457 -0.054 D 111 109 3 112 3 0 0 30 49 -6.174 -1.687 -0.566 IL 112 112 3 112 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - a - - - ML 113 112 3 115 5 1 1 30 48 -2.846 -0.230 -8.134 -8.347 -9.238 0.572 -0.149 -0.738 0.017 D 114 112 3 115 5 0 0 28 47 -4.959 -0.803 -4.221 -2.596 -2.508 IL 115 115 3 115 5 1 1 30 48 -3.328 -0.241 -5.007 -6.839 -6.113 0.000 0.000 0.000 0.000 [ MATP 35 ] 35 50 c g - - MP 116 115 3 120 6 2 2 29 47 -9.813 -9.752 -0.013 -8.528 -8.808 -9.203 -0.508 -1.215 -0.934 0.955 -1.999 -2.453 2.168 -2.359 -2.075 0.655 -2.649 -0.720 1.108 -1.007 0.356 -0.377 ML 117 115 3 120 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 118 115 3 120 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 119 115 3 120 6 0 0 25 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 120 120 5 120 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 121 121 6 121 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 36 49 U A - - MP 122 121 6 126 6 2 2 27 45 -9.813 -9.752 -0.013 -8.528 -8.808 -9.203 -5.143 -4.762 -4.980 -0.918 -3.892 -5.649 0.770 -4.539 -4.910 -0.850 -5.307 0.080 3.514 -5.386 -1.516 -3.743 ML 123 121 6 126 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 124 121 6 126 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 125 121 6 126 6 0 0 23 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 126 126 5 126 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 127 127 6 127 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 37 48 A U - - MP 128 127 6 132 6 2 2 25 43 -9.813 -9.752 -0.013 -8.528 -8.808 -9.203 -4.982 -3.807 -5.107 3.585 -5.968 -7.113 -1.549 -5.140 -4.808 -0.216 -5.419 -0.373 0.683 -5.970 -3.497 -3.798 ML 129 127 6 132 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 130 127 6 132 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 131 127 6 132 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 132 132 5 132 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 133 133 6 133 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 38 47 u a - - MP 134 133 6 138 6 2 2 23 41 -9.813 -9.752 -0.013 -8.528 -8.808 -9.203 -4.437 -4.399 -4.381 -0.146 -3.396 -5.031 0.974 -4.074 -4.368 -0.502 -4.803 -2.369 2.898 -4.626 1.998 -1.589 ML 135 133 6 138 6 1 1 22 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 136 133 6 138 6 1 1 22 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 137 133 6 138 6 0 0 20 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 138 138 5 138 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 139 139 6 139 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 39 46 C G - - MP 140 139 6 144 6 2 2 21 39 -9.813 -9.752 -0.013 -8.528 -8.808 -9.203 -7.388 -7.529 -6.514 -3.751 -4.883 -6.557 3.935 -6.078 -6.867 -3.717 -6.589 -5.710 -1.869 -7.290 -2.881 -5.670 ML 141 139 6 144 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 142 139 6 144 6 1 1 21 39 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 143 139 6 144 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 144 144 5 144 6 1 1 21 39 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 145 145 6 145 5 1 1 20 39 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 40 45 U G - - MP 146 145 6 150 4 2 2 19 37 -8.355 -8.562 -0.020 -6.976 0.033 -5.745 -5.437 -2.023 -3.994 -5.765 0.297 -4.806 -5.464 -2.108 -5.679 -3.585 -0.681 -5.995 3.620 -4.309 ML 147 145 6 150 4 1 1 20 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 148 145 6 150 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 149 145 6 150 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 150 150 5 150 4 1 1 22 40 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 151 151 6 151 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - G - - - ML 152 151 6 154 3 1 1 15 34 -9.306 -0.008 -7.960 -2.776 -3.861 1.818 -1.952 D 153 151 6 154 3 0 0 16 34 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - g - - - ML 155 154 3 157 3 1 1 14 32 -9.306 -0.008 -7.960 0.170 -0.905 0.484 -0.085 D 156 154 3 157 3 0 0 15 33 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - A - - - ML 158 157 3 160 3 1 1 12 31 -9.306 -0.008 -7.960 1.516 -3.175 -0.168 -2.836 D 159 157 3 160 3 0 0 13 32 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - A - - - ML 161 160 3 163 2 1 1 1 1 * 0.000 1.798 -3.530 -1.583 -3.303 D 162 160 3 163 2 0 0 0 0 * 0.000 IL 163 163 3 163 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 164 163 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME serC ACC RF00517 DESC serC leader LENG 52 MAXL 117 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:44:07 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 70 EFFN 13.488159 CKSUM 2739045993 STATS LOCAL MSV -7.1621 0.71930 STATS LOCAL VITERBI -7.8953 0.71930 STATS LOCAL FORWARD -4.3748 0.71930 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.36323 1.25898 1.25830 1.73677 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 0.00000 * 1 1.57947 0.60991 2.63298 1.72231 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 2 1.46900 1.85749 0.62780 2.52551 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 3 2.36593 3.17573 0.22386 2.73420 3 G - - : 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 4 3.01748 0.94940 3.18788 0.64847 4 U - - : 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 5 3.23455 4.58767 0.08220 3.52822 5 G - - : 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 6 4.64061 5.75185 0.01880 5.15033 6 G - - : 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 7 4.64061 5.75185 0.01880 5.15033 7 G - - : 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 8 0.26864 2.00206 3.57968 2.62226 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 9 3.07571 0.14622 4.34185 2.56577 9 C - - : 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 10 0.01678 5.42429 5.01824 5.18165 10 A - - : 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 11 4.61512 0.09197 3.52385 3.02663 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 12 2.98084 0.30707 2.08141 2.42031 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 13 4.37238 0.54416 4.22102 0.93556 13 C - - < 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 14 4.50689 0.22802 4.39562 1.71187 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 15 4.58040 2.08876 4.48810 0.15704 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 16 5.48128 0.02168 5.50205 4.32686 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03677 3.50841 5.09028 0.37020 1.17311 1.09861 0.40547 17 5.04925 0.02321 5.39190 4.42530 18 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 18 5.04925 0.02321 5.39190 4.42530 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 19 4.69044 0.05125 5.05624 3.36947 20 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 20 0.01678 5.42429 5.01824 5.18165 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 21 0.21695 1.95569 3.76510 3.49336 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 22 5.04925 0.02321 5.39190 4.42530 23 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 23 4.53244 5.61753 0.01924 5.36699 24 G - - > 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 24 0.18560 4.61194 1.92177 4.33413 25 A - - > 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 25 1.77766 4.51713 0.21594 4.25030 26 G - - > 1.38629 1.38629 1.38629 1.38629 0.05177 3.11683 5.09028 0.25798 1.48109 1.09861 0.40547 26 0.96742 4.36480 0.52590 4.12294 28 G - - > 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 27 2.62265 2.13511 0.28813 2.82194 29 G - - > 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 28 3.56991 4.59887 0.07185 3.47024 30 G - - > 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 29 2.74599 0.10283 4.66465 3.72487 31 C - - - 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 30 1.11574 2.63661 0.99982 1.45767 32 g - - - 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 31 0.95318 1.46199 1.94953 1.42558 33 a - - - 1.38629 1.38629 1.38629 1.38629 0.18216 1.83026 5.09028 0.07508 2.62648 1.09861 0.40547 32 1.49262 1.04079 2.01523 1.24219 35 c - - < 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 33 3.98045 2.61817 2.42447 0.19862 36 U - - < 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 34 0.20796 4.59352 2.64155 2.24059 37 A - - < 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 35 3.18405 2.63132 3.71739 0.14815 38 U - - < 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 36 5.48600 0.02164 5.50530 4.32804 39 C - - < 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 37 2.51314 2.95308 4.27249 0.15916 40 U - - < 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 38 3.89733 4.68723 0.09753 2.75799 41 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 39 1.28023 2.10034 0.98191 1.49159 42 g - - _ 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 40 0.30143 4.27482 1.46803 4.13837 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 41 0.11144 4.38703 2.53589 4.28136 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 42 2.33161 4.49943 0.13322 4.10615 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 43 4.54979 5.64867 0.01878 5.40086 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 44 0.60709 3.89444 0.99570 2.72962 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 45 2.26098 3.44506 4.38154 0.16094 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 46 0.21057 4.09269 2.49958 2.39617 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 47 1.63839 1.84811 0.80310 1.60827 50 g - - > 1.38629 1.38629 1.38629 1.38629 0.03227 5.09028 3.66532 1.46634 0.26236 1.09861 0.40547 48 1.24248 0.85644 1.95751 1.92793 51 c - - : 1.38629 1.38629 1.38629 1.38629 0.01264 5.07065 5.07065 1.46634 0.26236 1.81770 0.17721 49 0.67005 1.51804 2.09013 1.92754 52 A - - : 1.38629 1.38629 1.38629 1.38629 0.01264 5.07065 5.07065 1.46634 0.26236 1.81770 0.17721 50 1.37530 1.81636 1.50116 1.01681 53 u - - : 1.38629 1.38629 1.38629 1.38629 0.01264 5.07065 5.07065 1.46634 0.26236 0.39274 1.12456 51 0.93982 1.58734 1.89149 1.37047 54 a - - : 1.38629 1.38629 1.38629 1.38629 0.01239 5.09028 5.09028 1.46634 0.26236 1.09861 0.40547 52 0.95258 1.62624 1.98973 1.26992 55 a - - : 1.38629 1.38629 1.38629 1.38629 0.00621 5.08411 * 1.46634 0.26236 0.00000 * //