INFERNAL1/a [1.1.5 | Sep 2023] NAME Glycine ACC RF00504 DESC Glycine riboswitch aptamer STATES 291 NODES 78 CLEN 94 W 222 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 04:03:36 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00504/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 44 EFFN 4.519775 CKSUM 1538723602 NULL 0.000 0.000 0.000 0.000 GA 32.00 TC 32.00 NC 31.90 EFP7GF -11.0708 0.71853 ECMLC 0.66174 -5.60219 2.10014 1600000 196222 0.006116 ECMGC 0.42535 -14.66600 -4.77096 1600000 26912 0.014863 ECMLI 0.60692 -3.99995 3.88155 1600000 143414 0.008367 ECMGI 0.46648 -8.95425 -0.00763 1600000 25974 0.015400 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 222 370 -7.743 -7.950 -0.392 -2.127 IL 1 1 2 1 4 13 44 224 373 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 12 44 224 372 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 12 43 222 371 -8.380 -0.015 -7.034 0.366 -0.383 -0.379 0.233 D 4 2 3 5 3 8 39 218 367 -8.255 -3.768 -0.115 IL 5 5 3 5 3 12 43 223 371 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - u - - - ML 6 5 3 8 3 12 42 221 370 -8.380 -0.015 -7.034 -0.249 -0.668 0.150 0.506 D 7 5 3 8 3 8 39 218 366 -8.255 -3.768 -0.115 IL 8 8 3 8 3 11 42 222 370 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 11 41 220 369 -8.380 -0.015 -7.034 0.594 -0.954 0.450 -0.717 D 10 8 3 11 3 8 39 218 366 -8.255 -3.768 -0.115 IL 11 11 3 11 3 11 42 221 369 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - a - - - ML 12 11 3 14 3 10 40 219 368 -8.380 -0.015 -7.034 0.507 0.075 -0.744 -0.108 D 13 11 3 14 3 8 39 217 366 -8.255 -3.768 -0.115 IL 14 14 3 14 3 10 41 220 368 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 15 14 3 17 3 9 39 218 367 -8.746 -0.254 -2.650 0.401 -0.419 -0.115 0.012 D 16 14 3 17 3 8 39 217 366 -7.189 -0.208 -2.972 IL 17 17 3 17 3 10 41 219 368 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 215 - g - - MR 18 17 3 20 3 11 42 218 366 -8.880 -0.013 -7.198 0.336 -0.770 0.566 -0.575 D 19 17 3 20 3 6 35 214 363 -7.801 -2.382 -0.315 IR 20 20 3 20 3 9 40 218 367 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 214 - a - - MR 21 20 3 23 3 11 41 217 365 -8.901 -0.013 -7.218 0.248 -0.455 0.187 -0.083 D 22 20 3 23 3 6 34 214 362 -7.704 -2.882 -0.218 IR 23 23 3 23 3 9 40 217 366 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 213 - a - - MR 24 23 3 26 3 10 41 216 364 -8.901 -0.013 -7.218 0.558 -0.385 -0.223 -0.143 D 25 23 3 26 3 5 34 213 362 -7.704 -2.882 -0.218 IR 26 26 3 26 3 9 39 216 365 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 212 - a - - MR 27 26 3 29 3 10 40 215 363 -8.901 -0.013 -7.218 0.319 -0.418 0.109 -0.112 D 28 26 3 29 3 5 33 213 362 -7.704 -0.581 -1.614 IR 29 29 3 29 3 8 38 215 364 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 211 - g - - MR 30 29 3 32 5 9 39 214 362 -7.752 -0.025 -7.567 -7.779 -8.671 -0.050 -0.403 0.502 -0.215 D 31 29 3 32 5 4 31 211 360 -5.477 -0.633 -3.103 -4.534 -2.529 IR 32 32 3 32 5 7 35 214 362 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 6 210 c g - - MP 33 32 3 37 6 10 40 213 361 -9.464 -9.404 -0.016 -8.180 -8.460 -8.855 -0.914 -1.546 -1.073 1.169 -1.817 -2.677 1.762 -1.774 -1.381 1.019 -1.936 -0.285 1.472 -1.966 0.292 -0.911 ML 34 32 3 37 6 6 33 210 359 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 3 37 6 6 33 210 359 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 3 37 6 3 28 205 354 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 6 35 212 360 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 7 35 212 360 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 7 209 c g - - MP 39 38 6 43 6 10 39 211 359 -9.464 -9.404 -0.016 -8.180 -8.460 -8.855 -1.631 -1.072 -0.083 1.293 -1.280 -2.681 1.578 -1.467 -1.650 1.182 -1.681 -0.368 1.308 -1.970 0.027 -1.099 ML 40 38 6 43 6 5 32 208 357 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 5 32 208 357 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 2 27 203 352 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 6 34 210 358 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 6 34 210 358 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 8 208 c g - - MP 45 44 6 49 6 10 37 209 357 -9.464 -9.404 -0.016 -8.180 -8.460 -8.855 -1.398 -0.776 -0.515 1.217 -1.849 -2.713 1.633 -1.848 -1.930 1.228 -2.008 -0.541 1.597 -2.002 -0.105 -1.128 ML 46 44 6 49 6 5 32 206 355 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 5 32 206 355 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 2 27 202 350 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 6 33 208 356 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 6 34 208 356 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 9 207 c g - - MP 51 50 6 55 6 9 36 207 355 -9.464 -9.404 -0.028 -6.451 -8.460 -8.855 -1.795 -1.988 -1.346 1.452 -1.615 -2.838 1.914 -2.304 -2.048 0.916 -2.619 -0.442 1.497 -1.758 0.182 -0.712 ML 52 50 6 55 6 5 31 204 353 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 5 31 204 353 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 2 27 200 349 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 6 33 206 355 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 6 33 206 354 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 206 u a - - MP 57 56 6 61 6 7 34 205 353 -7.001 -9.392 -0.051 -8.169 -8.448 -5.734 -2.094 -2.554 -2.846 1.094 -2.675 -3.658 1.436 -3.055 -2.921 1.917 -3.441 0.056 2.049 -2.950 -0.537 -1.926 ML 58 56 6 61 6 4 30 202 351 -6.434 -6.780 -1.494 -1.189 -6.630 -2.509 0.260 -0.620 0.309 -0.131 MR 59 56 6 61 6 5 30 202 351 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 2 26 199 348 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 6 32 204 353 -2.690 -2.953 -0.688 -4.608 -5.384 -5.044 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 6 32 204 352 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 12 205 C G - - MP 63 62 6 67 6 8 33 203 352 -9.429 -9.368 -0.029 -6.390 -8.424 -8.819 -3.747 -3.567 -3.765 0.519 -2.861 -4.545 3.032 -3.479 -3.707 0.717 -4.201 -0.877 1.295 -3.952 -0.194 -2.542 ML 64 62 6 67 6 4 30 201 350 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 4 29 200 349 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 2 26 198 347 -9.663 -8.361 -1.788 -4.840 -4.858 -0.651 IL 67 67 5 67 6 5 31 202 351 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 5 31 202 351 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 13 204 g c - - MP 69 68 6 73 6 8 32 201 350 -9.441 -9.380 -0.017 -8.157 -8.436 -8.831 -3.187 -2.820 -3.252 1.285 -2.948 -4.047 1.562 -3.355 -3.319 2.048 -3.812 -0.472 1.993 -3.343 -0.635 -2.216 ML 70 68 6 73 6 4 29 199 348 -6.438 -6.784 -1.499 -0.837 -6.634 -4.164 0.708 -0.618 -0.327 -0.123 MR 71 68 6 73 6 3 27 199 347 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 1 25 197 345 -9.279 -7.978 -2.180 -4.457 -4.474 -0.550 IL 73 73 5 73 6 5 30 200 349 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 5 30 200 349 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 14 203 G C - - MP 75 74 6 79 4 6 30 199 348 -7.720 -7.927 -0.031 -6.342 -5.297 -3.450 -5.404 0.540 -6.351 -5.110 -1.453 -5.801 -4.823 3.699 -5.133 -1.135 -1.742 -4.904 -3.515 -4.275 ML 76 74 6 79 4 3 28 198 347 -3.901 -4.083 -0.451 -2.812 0.256 -0.623 0.316 -0.133 MR 77 74 6 79 4 2 26 197 345 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 78 74 6 79 4 1 24 195 344 -4.568 -4.250 -2.265 -0.520 IL 79 79 5 79 4 4 29 199 347 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 80 80 6 80 3 4 28 198 347 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 15 - G - - - ML 81 80 6 83 3 5 28 197 346 -8.715 -0.012 -7.369 -2.201 -3.905 1.854 -3.322 D 82 80 6 83 3 1 24 194 343 -6.174 -1.687 -0.566 IL 83 83 3 83 3 4 28 197 346 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 16 - A - - - ML 84 83 3 86 3 5 27 196 345 -8.715 -0.012 -7.369 1.905 -3.848 -3.351 -3.535 D 85 83 3 86 3 1 23 193 342 -6.174 -1.687 -0.566 IL 86 86 3 86 3 3 27 196 345 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 17 - G - - - ML 87 86 3 89 3 4 26 195 344 -8.715 -0.012 -7.369 -0.382 -2.693 1.514 -2.168 D 88 86 3 89 3 1 23 193 341 -6.174 -1.687 -0.566 IL 89 89 3 89 3 3 26 195 344 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 18 - A - - - ML 90 89 3 92 3 3 25 194 343 -8.715 -0.038 -5.413 1.905 -3.848 -3.351 -3.535 D 91 89 3 92 3 0 22 192 340 -6.174 -1.687 -0.566 IL 92 92 3 92 3 3 25 194 343 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 19 - G - - - ML 93 92 3 95 3 2 24 193 342 -8.690 -0.124 -3.650 -0.477 -1.749 1.360 -1.260 D 94 92 3 95 3 0 22 191 340 -6.520 -2.033 -0.425 IL 95 95 3 95 3 3 25 194 342 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 20 - a - - - ML 96 95 3 98 3 3 24 192 341 -8.937 -0.012 -7.255 0.801 -0.644 -1.041 0.178 D 97 95 3 98 3 0 21 191 339 -6.507 -0.350 -2.290 IL 98 98 3 98 3 2 23 192 341 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 202 - A - - MR 99 98 3 101 3 3 23 191 340 -9.067 -0.011 -7.385 1.905 -3.848 -3.351 -3.535 D 100 98 3 101 3 0 19 189 337 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 22 191 340 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 201 - G - - MR 102 101 3 104 3 2 22 190 339 -6.036 -0.031 -7.385 -0.645 -1.549 1.256 -0.664 D 103 101 3 104 3 0 19 188 337 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 21 190 339 -2.025 -0.510 -4.264 0.000 0.000 0.000 0.000 [ MATR 27 ] - 199 - G - - MR 105 104 3 107 3 2 21 189 338 -9.067 -0.011 -7.385 -0.376 -1.271 1.063 -0.463 D 106 104 3 107 3 0 18 187 336 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 21 189 338 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 198 - a - - MR 108 107 3 110 3 2 20 188 337 -9.067 -0.011 -7.385 0.983 -0.433 -0.645 -0.636 D 109 107 3 110 3 0 17 186 335 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 20 188 337 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 197 - a - - MR 111 110 3 113 3 1 19 187 336 -9.067 -0.155 -3.321 0.775 -0.187 -0.724 -0.314 D 112 110 3 113 3 0 17 186 335 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 19 188 336 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 196 - a - - MR 114 113 3 116 3 2 18 186 335 -8.924 -0.013 -7.242 0.823 -0.017 -0.975 -0.447 D 115 113 3 116 3 0 17 186 335 -7.582 -2.759 -0.239 IR 116 116 3 116 3 1 18 187 335 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 195 - A - - MR 117 116 3 119 2 1 17 185 334 -2.402 -0.303 1.079 -0.667 -0.842 -0.515 D 118 116 3 119 2 0 17 186 335 -0.755 -1.295 IR 119 119 3 119 2 1 18 188 336 -0.461 -1.872 0.000 0.000 0.000 0.000 [ BIF 32 ] - - - - - - B 120 119 3 121 174 0 16 183 332 [ BEGL 33 ] - - - - - - S 121 120 1 122 4 0 0 107 219 -0.032 -7.289 -6.697 -7.337 [ MATP 34 ] 21 83 c g - - MP 122 121 1 126 6 2 2 107 219 -9.464 -9.404 -0.016 -8.180 -8.460 -8.855 -3.189 -2.955 -3.271 1.144 -2.805 -4.081 2.297 -3.282 -3.296 1.831 -3.808 -0.576 1.328 -3.387 0.004 -2.208 ML 123 121 1 126 6 1 1 105 217 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 124 121 1 126 6 1 1 105 216 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 125 121 1 126 6 0 0 101 212 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 126 126 5 126 6 1 1 106 218 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 127 127 6 127 5 1 1 106 218 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 22 82 c g - - MP 128 127 6 132 6 2 2 105 217 -9.464 -9.404 -0.027 -8.180 -8.460 -6.785 -3.177 -2.957 -3.261 0.973 -2.788 -4.074 2.314 -3.268 -3.282 1.782 -3.797 -0.228 1.439 -3.380 -0.119 -2.199 ML 129 127 6 132 6 1 1 103 215 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 130 127 6 132 6 1 1 103 215 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 131 127 6 132 6 0 0 99 211 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 132 132 5 132 6 1 1 104 216 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 133 133 6 133 5 1 1 104 216 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 23 81 c g - - MP 134 133 6 138 6 2 2 103 215 -9.454 -9.394 -0.096 -8.170 -8.450 -4.181 -2.032 -2.615 -2.806 1.105 -2.528 -3.633 1.974 -2.958 -2.851 1.730 -3.388 -0.404 1.774 -2.931 -0.223 -1.877 ML 135 133 6 138 6 1 1 102 214 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 136 133 6 138 6 1 1 101 213 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 137 133 6 138 6 0 0 98 210 -9.250 -7.949 -3.746 -4.428 -4.445 -0.273 IL 138 138 5 138 6 1 1 103 214 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 139 139 6 139 5 1 1 102 214 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 24 80 g c - - MP 140 139 6 144 4 2 2 101 213 -7.567 -7.774 -0.384 -2.160 -2.359 -2.244 -1.765 1.195 -2.474 -2.476 1.686 -2.807 -2.593 2.186 -3.120 -0.303 1.235 -2.594 -0.302 -1.656 ML 141 139 6 144 4 1 1 101 212 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 142 139 6 144 4 1 1 100 211 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 143 139 6 144 4 0 0 98 209 -5.710 -5.391 -3.407 -0.213 IL 144 144 5 144 4 1 1 102 213 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 145 145 6 145 3 1 1 101 213 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 25 - c - - - ML 146 145 6 148 3 1 1 100 212 -8.225 -0.100 -3.971 -0.200 0.316 -0.214 0.031 D 147 145 6 148 3 0 0 97 209 -8.630 -4.143 -0.088 IL 148 148 3 148 3 1 1 101 212 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 26 - g - - - ML 149 148 3 151 3 1 1 99 211 -1.643 -0.670 -4.283 -0.325 -0.091 0.206 0.149 D 150 148 3 151 3 0 0 97 208 -8.782 -0.257 -2.637 IL 151 151 3 151 3 1 1 100 212 -0.664 -1.495 -6.130 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - u - - - ML 152 151 3 154 3 1 1 97 209 -8.644 -0.013 -7.298 0.009 -0.745 0.015 0.472 D 153 151 3 154 3 0 0 95 206 -6.980 -0.724 -1.371 IL 154 154 3 154 3 1 1 97 209 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - u - - - ML 155 154 3 157 3 1 1 96 208 -8.715 -0.012 -7.369 0.234 -0.218 -0.788 0.470 D 156 154 3 157 3 0 0 92 204 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 96 208 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - a - - - ML 158 157 3 160 3 1 1 95 207 -8.715 -0.012 -7.369 0.566 -0.126 -0.967 0.127 D 159 157 3 160 3 0 0 90 202 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 95 207 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - a - - - ML 161 160 3 163 3 1 1 94 206 -8.715 -0.231 -2.777 0.480 -0.578 0.179 -0.316 D 162 160 3 163 3 0 0 87 199 -6.174 -1.687 -0.566 IL 163 163 3 163 3 1 1 95 207 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - a - - - ML 164 163 3 166 3 1 1 94 206 -1.690 -1.117 -2.126 0.880 0.055 -1.392 -0.436 D 165 163 3 166 3 0 0 67 179 -7.841 -1.690 -0.544 IL 166 166 3 166 3 1 1 100 212 -0.238 -2.766 -7.594 0.000 0.000 0.000 0.000 [ MATL 45 ] 78 - a - - - ML 167 166 3 169 3 1 1 13 31 -8.226 -0.017 -6.880 0.176 -0.165 0.004 -0.036 D 168 166 3 169 3 0 0 12 30 -8.627 -2.453 -0.295 IL 169 169 3 169 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 79 - g - - - ML 170 169 3 172 2 1 1 1 1 * 0.000 0.118 -0.596 0.298 0.034 D 171 169 3 172 2 0 0 0 0 * 0.000 IL 172 172 3 172 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 47 ] - - - - - - E 173 172 3 -1 0 0 0 0 0 [ BEGR 48 ] - - - - - - S 174 120 1 175 3 0 3 161 310 -5.789 -0.035 -7.369 IL 175 175 2 175 3 1 2 163 311 -1.528 -0.737 -4.228 0.000 0.000 0.000 0.000 [ MATL 49 ] 85 - C - - - ML 176 175 2 178 5 1 3 161 310 -7.768 -0.024 -7.583 -7.796 -8.687 -1.451 1.497 -2.205 -0.750 D 177 175 2 178 5 0 0 159 308 -4.959 -0.803 -4.221 -2.596 -2.508 IL 178 178 3 178 5 1 1 161 310 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 86 179 G C - - MP 179 178 3 183 6 2 4 160 309 -9.464 -9.404 -0.016 -8.180 -8.460 -8.855 -4.139 -2.825 -4.076 1.916 -5.083 -4.785 -0.343 -4.570 -4.209 3.091 -4.577 0.493 -0.596 -4.066 -2.326 -2.982 ML 180 178 3 183 6 1 1 158 307 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 181 178 3 183 6 1 1 158 307 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 182 178 3 183 6 0 0 155 303 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 183 183 5 183 6 1 1 160 308 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 184 184 6 184 5 1 1 159 308 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 87 178 C G - - MP 185 184 6 189 6 2 4 158 307 -9.464 -9.404 -0.016 -8.180 -8.460 -8.855 -6.215 -6.262 -5.596 -2.433 -4.050 -5.788 3.854 -5.039 -5.759 -2.346 -5.780 -4.299 -0.772 -6.169 -1.857 -4.564 ML 186 184 6 189 6 1 1 157 305 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 187 184 6 189 6 1 1 157 305 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 188 184 6 189 6 0 0 154 302 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 189 189 5 189 6 1 1 158 306 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 190 190 6 190 5 1 1 157 306 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 88 177 C G - - MP 191 190 6 195 4 2 2 156 305 -7.609 -8.855 -0.048 -5.308 -6.215 -6.262 -5.596 -2.433 -4.050 -5.788 3.854 -5.039 -5.759 -2.346 -5.780 -4.299 -0.772 -6.169 -1.857 -4.564 ML 192 190 6 195 4 1 1 155 304 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 193 190 6 195 4 1 1 155 304 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 194 190 6 195 4 0 0 153 302 -12.737 -14.007 -2.036 -0.404 IL 195 195 5 195 4 1 1 155 304 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 196 196 6 196 3 1 1 156 304 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 53 ] - 176 - A - - MR 197 196 6 199 5 1 1 154 303 -7.768 -0.024 -7.583 -7.796 -8.687 1.905 -3.848 -3.351 -3.535 D 198 196 6 199 5 0 0 152 301 -5.352 -0.707 -2.978 -4.409 -2.404 IR 199 199 3 199 5 1 1 154 303 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 89 175 G C - - MP 200 199 3 204 6 2 2 153 302 -9.464 -9.404 -0.016 -8.180 -8.460 -8.855 -5.771 -3.638 -5.953 -0.580 -6.579 -1.603 -1.673 -6.432 -5.044 3.781 -5.270 -1.457 -2.007 -4.971 -3.763 -4.932 ML 201 199 3 204 6 1 1 152 300 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 202 199 3 204 6 1 1 151 300 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 203 199 3 204 6 0 0 149 297 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 204 204 5 204 6 1 1 153 301 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 205 205 6 205 5 1 1 153 301 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 90 174 A U - - MP 206 205 6 210 4 2 2 152 300 -7.743 -7.950 -0.030 -6.365 -5.598 -4.474 -5.112 3.840 -6.471 -7.523 -2.169 -5.078 -5.449 -0.858 -6.039 -1.825 -2.501 -6.503 -4.076 -2.334 ML 207 205 6 210 4 1 1 150 299 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 208 205 6 210 4 1 1 149 298 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 209 205 6 210 4 0 0 148 297 -4.568 -4.250 -2.265 -0.520 IL 210 210 5 210 4 1 1 151 300 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 211 211 6 211 3 1 1 151 300 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 91 - A - - - ML 212 211 6 214 3 1 1 150 298 -8.715 -0.012 -7.369 1.470 -0.906 -1.904 -1.221 D 213 211 6 214 3 0 0 147 296 -6.174 -1.687 -0.566 IL 214 214 3 214 3 1 1 150 299 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 92 - G - - - ML 215 214 3 217 5 1 1 149 297 -7.768 -0.024 -7.583 -7.796 -8.687 -3.032 -4.423 1.910 -3.772 D 216 214 3 217 5 0 0 146 295 -4.959 -0.803 -4.221 -2.596 -2.508 IL 217 217 3 217 5 1 1 148 297 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 93 173 G C - - MP 218 217 3 222 6 2 2 148 296 -9.464 -9.404 -0.016 -8.180 -8.460 -8.855 -5.606 -3.589 -5.794 0.119 -6.693 -5.167 -1.753 -6.153 -4.956 3.766 -5.250 -1.307 -2.053 -5.090 -3.841 -4.659 ML 219 217 3 222 6 1 1 146 294 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 220 217 3 222 6 1 1 145 294 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 221 217 3 222 6 0 0 142 290 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 222 222 5 222 6 1 1 147 295 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 223 223 6 223 5 1 1 147 295 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 94 172 a u - - MP 224 223 6 228 6 2 2 146 294 -9.464 -9.404 -0.016 -8.180 -8.460 -8.855 -2.897 -2.452 -3.043 2.199 -3.135 -3.861 1.127 -3.314 -3.061 1.402 -3.551 1.448 0.437 -3.172 -1.054 -0.027 ML 225 223 6 228 6 1 1 144 293 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 226 223 6 228 6 1 1 143 292 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 227 223 6 228 6 0 0 141 289 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 228 228 5 228 6 1 1 145 293 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 229 229 6 229 5 1 1 145 293 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 95 171 G C - - MP 230 229 6 234 4 2 2 144 292 -7.743 -7.950 -0.030 -6.365 -5.520 -1.201 -5.661 -0.352 -6.590 -5.063 -1.640 -6.119 -4.937 3.752 -5.208 -1.275 -1.923 -4.944 -3.717 -4.573 ML 231 229 6 234 4 1 1 143 291 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 232 229 6 234 4 1 1 142 290 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 233 229 6 234 4 0 0 140 289 -4.568 -4.250 -2.265 -0.520 IL 234 234 5 234 4 1 1 143 292 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 235 235 6 235 3 1 1 143 292 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 96 - c - - - ML 236 235 6 238 3 1 1 142 290 -8.715 -0.012 -7.369 -0.109 0.752 -1.658 0.099 D 237 235 6 238 3 0 0 139 288 -6.174 -1.687 -0.566 IL 238 238 3 238 3 1 1 142 291 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 97 - A - - - ML 239 238 3 241 3 1 1 141 289 -8.715 -0.035 -5.555 1.653 -2.254 -2.255 -1.201 D 240 238 3 241 3 0 0 138 287 -6.174 -1.687 -0.566 IL 241 241 3 241 3 1 1 141 290 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 98 - A - - - ML 242 241 3 244 3 1 1 140 288 -3.950 -0.106 -7.363 1.672 -2.174 -1.524 -2.036 D 243 241 3 244 3 0 0 138 286 -5.814 -0.618 -1.597 IL 244 244 3 244 3 1 1 140 288 -2.338 -0.395 -4.577 0.000 0.000 0.000 0.000 [ MATR 64 ] - 170 - u - - MR 245 244 3 247 3 1 1 139 287 -9.067 -0.011 -7.385 0.366 -0.754 -0.535 0.514 D 246 244 3 247 3 0 0 136 284 -6.390 -1.568 -0.620 IR 247 247 3 247 3 1 1 139 287 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 65 ] - 169 - A - - MR 248 247 3 250 3 1 1 138 286 -9.067 -0.150 -3.372 1.438 -1.515 -1.166 -1.014 D 249 247 3 250 3 0 0 135 283 -6.390 -1.568 -0.620 IR 250 250 3 250 3 1 1 138 287 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 66 ] - 168 - A - - MR 251 250 3 253 3 1 1 137 286 -8.930 -0.229 -2.788 1.886 -3.583 -3.104 -3.248 D 252 250 3 253 3 0 0 133 282 -7.551 -2.729 -0.245 IR 253 253 3 253 3 1 1 138 286 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 67 ] - 167 - g - - MR 254 253 3 256 5 1 1 136 285 -7.433 -0.031 -7.248 -7.460 -8.352 -0.602 -0.640 0.977 -0.452 D 255 253 3 256 5 0 0 132 281 -6.761 -0.754 -4.387 -5.818 -1.589 IR 256 256 3 256 5 1 1 136 285 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 68 ] 100 166 g c - - MP 257 256 3 261 6 2 2 135 284 -9.389 -9.328 -0.032 -6.212 -8.385 -8.780 -2.254 -2.202 -1.918 1.416 -2.366 -3.221 1.485 -2.072 -2.489 1.843 -3.025 0.602 1.349 -2.512 -0.257 -1.580 ML 258 256 3 261 6 1 1 129 278 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 259 256 3 261 6 1 1 128 277 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 260 256 3 261 6 0 0 116 265 -10.123 -8.821 -4.618 -5.300 -5.318 -0.143 IL 261 261 5 261 6 1 1 134 283 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 262 262 6 262 5 1 1 134 283 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 69 ] 101 165 c g - - MP 263 262 6 267 4 2 2 134 282 -7.564 -1.444 -0.799 -4.256 -2.250 -2.362 -2.417 1.196 -1.662 -3.264 2.279 -2.614 -2.455 1.153 -3.015 -0.757 1.407 -1.869 0.283 -1.267 ML 264 262 6 267 4 1 1 120 269 -3.920 -4.102 -0.669 -2.020 0.735 -0.638 -0.351 -0.138 MR 265 262 6 267 4 1 1 120 269 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 266 262 6 267 4 0 0 112 261 -5.592 -5.273 -3.289 -0.233 IL 267 267 5 267 4 1 1 131 280 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 268 268 6 268 3 1 1 140 288 -0.179 -3.147 -8.116 0.000 0.000 0.000 0.000 [ MATL 70 ] 102 - a - - - ML 269 268 6 271 3 1 1 70 147 -8.491 -0.165 -3.251 0.273 0.184 -0.634 0.016 D 270 268 6 271 3 0 0 61 138 -7.873 -3.386 -0.152 IL 271 271 3 271 3 1 1 70 148 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 103 - u - - - ML 272 271 3 274 3 1 1 69 146 -8.342 -0.016 -6.996 0.020 -0.382 -0.074 0.344 D 273 271 3 274 3 0 0 58 135 -8.360 -3.873 -0.107 IL 274 274 3 274 3 1 1 69 147 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 104 - a - - - ML 275 274 3 277 3 1 1 68 145 -1.607 -0.591 -6.996 0.255 -0.042 -0.347 0.068 D 276 274 3 277 3 0 0 48 125 -8.360 -0.927 -1.086 IL 277 277 3 277 3 1 1 72 149 -0.345 -2.286 -7.066 0.000 0.000 0.000 0.000 [ MATL 73 ] 136 - u - - - ML 278 277 3 280 3 1 1 16 34 -8.572 -0.013 -7.226 -0.162 -0.229 0.069 0.269 D 279 277 3 280 3 0 0 15 33 -7.478 -2.991 -0.203 IL 280 280 3 280 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 74 ] 137 - C - - - ML 281 280 3 283 3 1 1 14 33 -8.572 -0.013 -7.226 -0.335 1.137 -1.914 -0.431 D 282 280 3 283 3 0 0 14 32 -7.478 -2.991 -0.203 IL 283 283 3 283 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 75 ] 138 - c - - - ML 284 283 3 286 3 1 1 13 31 -8.572 -0.090 -4.116 -0.398 0.742 -0.660 -0.096 D 285 283 3 286 3 0 0 12 31 -7.478 -2.991 -0.203 IL 286 286 3 286 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 76 ] 139 - c - - - ML 287 286 3 289 2 1 1 1 1 * 0.000 -0.074 0.458 -0.680 0.073 D 288 286 3 289 2 0 0 0 0 * 0.000 IL 289 289 3 289 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 77 ] - - - - - - E 290 289 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Glycine ACC RF00504 DESC Glycine riboswitch aptamer LENG 94 MAXL 289 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 04:03:36 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00504/CM NSEQ 44 EFFN 13.371338 CKSUM 1538723602 STATS LOCAL MSV -8.7489 0.71853 STATS LOCAL VITERBI -10.1368 0.71853 STATS LOCAL FORWARD -4.0586 0.71853 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.26727 1.41656 1.24130 1.67748 1.38629 1.38629 1.38629 1.38629 0.21280 5.06415 1.68542 1.46634 0.26236 0.00000 * 1 1.09859 1.67754 1.64773 1.24709 1 a - - : 1.38629 1.38629 1.38629 1.38629 0.01551 4.86686 4.86686 1.46634 0.26236 3.44469 0.03244 2 1.82009 2.02180 1.11622 0.97271 2 u - - : 1.38629 1.38629 1.38629 1.38629 0.01551 4.86686 4.86686 1.46634 0.26236 3.44469 0.03244 3 0.89714 2.26298 0.88088 2.60626 3 g - - : 1.38629 1.38629 1.38629 1.38629 0.01551 4.86686 4.86686 1.46634 0.26236 3.44469 0.03244 4 0.96855 1.19417 2.04555 1.67078 4 a - - : 1.38629 1.38629 1.38629 1.38629 0.01551 4.86686 4.86686 1.46634 0.26236 3.44469 0.03244 5 1.07310 1.68307 1.40299 1.48549 5 a - - : 1.38629 1.38629 1.38629 1.38629 0.01551 4.86686 4.86686 1.46634 0.26236 0.06596 2.75154 6 1.49575 1.28939 1.56807 1.23088 6 u - - ( 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 7 1.19220 1.39505 1.46123 1.52935 7 a - - ( 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 8 1.28119 1.45251 1.56504 1.27571 8 u - - ( 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 9 1.40017 1.20744 1.87911 1.19813 9 u - - ( 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 10 1.92907 1.99824 1.07504 0.97323 10 u - - ( 1.38629 1.38629 1.38629 1.38629 0.08538 3.90242 2.78639 0.49442 0.94141 1.09861 0.40547 11 2.58642 0.42116 2.24082 1.81982 12 C - - ( 1.38629 1.38629 1.38629 1.38629 0.01220 5.10537 5.10537 1.46634 0.26236 0.52135 0.90071 12 1.74250 1.86592 1.12951 1.05851 13 u - - ( 1.38629 1.38629 1.38629 1.38629 0.01173 5.14450 5.14450 1.46634 0.26236 0.39045 1.12933 13 2.47861 4.66007 0.11015 4.51232 14 G - - ( 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 14 3.43935 5.28412 0.04644 4.80120 15 G - - , 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 15 0.01695 5.41377 5.00825 5.17221 16 A - - , 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 16 1.72940 4.24269 0.23767 3.92318 17 G - - , 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 17 0.01695 5.41377 5.00825 5.17221 18 A - - , 1.38629 1.38629 1.38629 1.38629 0.03351 5.16292 3.60341 1.46634 0.26236 1.09861 0.40547 18 1.92586 2.99012 0.30070 2.75403 19 G - - , 1.38629 1.38629 1.38629 1.38629 0.10847 5.14118 2.33358 1.46634 0.26236 1.91050 0.16018 19 0.70329 1.97737 2.41441 1.28305 20 a - - , 1.38629 1.38629 1.38629 1.38629 0.01296 5.04566 5.04566 1.46634 0.26236 0.09385 2.41263 20 1.93219 0.97682 1.28726 1.59633 21 c - - < 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 21 2.16298 0.95813 1.25496 1.53099 22 c - - < 1.38629 1.38629 1.38629 1.38629 0.02761 5.16292 3.83919 1.46634 0.26236 1.09861 0.40547 22 1.87902 1.28785 1.31749 1.19208 23 u - - < 1.38629 1.38629 1.38629 1.38629 0.14363 5.14701 2.05592 1.46634 0.26236 1.75048 0.19078 23 1.77422 1.41004 0.95638 1.59965 24 g - - < 1.38629 1.38629 1.38629 1.38629 0.31140 5.01672 1.34342 1.46634 0.26236 3.28684 0.03809 24 1.78425 0.96295 1.45145 1.53211 25 c - - _ 1.38629 1.38629 1.38629 1.38629 0.09780 4.72325 2.47361 1.46634 0.26236 4.17654 0.01547 25 2.01867 1.33394 1.04120 1.38349 26 g - - _ 1.38629 1.38629 1.38629 1.38629 0.73290 0.79667 2.67861 1.27410 0.32806 0.08825 2.47138 26 1.47772 2.10634 1.26696 0.99838 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01225 5.10176 5.10176 1.46634 0.26236 0.16213 1.89933 27 1.21515 1.53039 2.06170 1.02263 42 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 28 0.91259 1.41719 2.29463 1.36523 43 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 29 1.00279 1.81875 1.14700 1.87518 44 a - - _ 1.38629 1.38629 1.38629 1.38629 0.20338 5.16292 1.72424 1.46634 0.26236 1.09861 0.40547 30 0.61249 1.20977 3.09821 2.16629 45 A - - _ 1.38629 1.38629 1.38629 1.38629 1.18112 0.91329 1.23147 2.25860 0.11037 1.16536 0.37369 31 1.31393 1.40748 1.27640 1.57291 78 g - - _ 1.38629 1.38629 1.38629 1.38629 0.01791 4.72456 4.72456 1.46634 0.26236 1.81792 0.17717 32 1.37379 1.88292 1.02156 1.44955 79 g - - _ 1.38629 1.38629 1.38629 1.38629 0.12345 4.80593 2.22605 1.46634 0.26236 0.28055 1.40799 33 1.82412 1.02302 1.24856 1.64914 80 c - - > 1.38629 1.38629 1.38629 1.38629 0.01334 5.01672 5.01672 1.46634 0.26236 0.19576 1.72714 34 1.29676 1.47398 1.15877 1.69445 81 g - - > 1.38629 1.38629 1.38629 1.38629 0.01170 5.14701 5.14701 1.46634 0.26236 0.42676 1.05734 35 1.80144 1.46559 0.84047 1.75744 82 g - - > 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 36 1.95673 1.41065 0.83378 1.71318 83 g - - > 1.38629 1.38629 1.38629 1.38629 0.03133 3.68430 5.16292 0.40656 1.09643 1.09861 0.40547 37 2.95852 0.20615 3.35393 2.30813 85 C - - , 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 38 1.26116 3.69031 0.41282 3.50883 86 G - - < 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 39 5.59477 0.02071 5.57453 4.34388 87 C - - < 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 40 5.55195 0.02112 5.54601 4.33397 88 C - - < 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 41 4.06204 3.24419 0.06436 5.09568 89 G - - < 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 42 0.02400 5.65173 4.53855 4.65474 90 A - - < 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 43 0.23358 2.04263 3.65789 2.94064 91 A - - - 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 44 4.63241 5.74237 0.01896 5.14203 92 G - - - 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 45 2.91116 5.01681 0.07041 4.96966 93 G - - < 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 46 0.81796 2.34795 1.08622 2.07456 94 a - - < 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 47 2.88995 5.05747 0.07094 5.02931 95 G - - < 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 48 1.55039 0.66648 3.33363 1.43271 96 C - - - 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 49 0.13674 3.86631 3.97549 2.42930 97 A - - - 1.38629 1.38629 1.38629 1.38629 0.03071 5.16292 3.70816 1.46634 0.26236 1.09861 0.40547 50 0.13257 3.37311 2.71206 3.75162 98 A - - - 1.38629 1.38629 1.38629 1.38629 0.23761 2.44245 2.08310 0.12920 2.11033 0.38316 1.14477 51 1.52291 1.65177 1.02163 1.46879 100 g - - < 1.38629 1.38629 1.38629 1.38629 0.01304 5.03908 5.03908 1.46634 0.26236 3.15041 0.04378 52 1.71741 0.93193 1.79739 1.34345 101 c - - < 1.38629 1.38629 1.38629 1.38629 0.08639 5.03908 2.57334 1.46634 0.26236 3.15041 0.04378 53 1.19331 1.10930 1.89969 1.52612 102 c - - _ 1.38629 1.38629 1.38629 1.38629 0.15064 4.96672 2.01835 1.46634 0.26236 3.52982 0.02975 54 1.47036 1.67611 1.33921 1.13630 103 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01607 4.83215 4.83215 1.46634 0.26236 3.95494 0.01935 55 1.21622 1.30886 1.61106 1.45307 104 a - - _ 1.38629 1.38629 1.38629 1.38629 0.59297 0.82247 4.83215 1.90037 0.16195 0.55886 0.84831 56 1.70362 1.50033 1.20819 1.21677 136 g - - _ 1.38629 1.38629 1.38629 1.38629 0.01304 5.03908 5.03908 1.46634 0.26236 3.15041 0.04378 57 1.75429 0.39096 3.62850 2.08743 137 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01304 5.03908 5.03908 1.46634 0.26236 3.15041 0.04378 58 1.97958 0.64913 1.87414 1.68262 138 C - - _ 1.38629 1.38629 1.38629 1.38629 0.08065 5.03908 2.64507 1.46634 0.26236 3.15041 0.04378 59 1.56518 0.87742 1.92365 1.47393 139 c - - _ 1.38629 1.38629 1.38629 1.38629 0.68961 0.76479 3.41751 2.50111 0.08555 1.11164 0.39902 60 1.73835 1.83032 0.77446 1.59517 165 g - - > 1.38629 1.38629 1.38629 1.38629 0.01337 5.01458 5.01458 1.46634 0.26236 1.74393 0.19217 61 1.66979 1.43654 1.47022 1.06685 166 u - - > 1.38629 1.38629 1.38629 1.38629 0.21790 5.03908 1.66433 1.46634 0.26236 3.15041 0.04378 62 2.46669 1.87092 0.44798 2.10182 167 G - - - 1.38629 1.38629 1.38629 1.38629 0.01599 4.83716 4.83716 1.46634 0.26236 0.56804 0.83617 63 0.02003 5.23963 4.84230 5.01459 168 A - - - 1.38629 1.38629 1.38629 1.38629 0.01304 5.03908 5.03908 1.46634 0.26236 0.08956 2.45726 64 0.24525 2.88245 2.47842 2.55591 169 A - - - 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 65 1.09361 2.13453 1.79900 0.96435 170 u - - - 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 66 5.09088 0.04046 4.94956 3.63407 171 C - - > 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 67 4.09059 3.17065 2.30791 0.17218 172 U - - > 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 68 5.03307 0.08003 4.87517 2.76839 173 C - - > 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 69 5.83198 5.00566 5.58019 0.01349 174 U - - > 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 70 5.22735 0.03615 5.03700 3.74485 175 C - - > 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 71 0.01695 5.41377 5.00825 5.17221 176 A - - - 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 72 4.56542 5.68744 0.01828 5.44337 177 G - - > 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 73 4.57956 5.71376 0.01792 5.47217 178 G - - > 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 74 3.76397 0.55891 3.49224 0.98205 179 C - - > 1.38629 1.38629 1.38629 1.38629 0.26562 1.48041 5.16292 1.76057 0.18868 1.09861 0.40547 75 0.47729 1.91467 2.17372 2.13376 195 A - - , 1.38629 1.38629 1.38629 1.38629 0.14200 5.16292 2.06630 1.46634 0.26236 1.09861 0.40547 76 0.67810 1.26661 2.35425 2.15701 196 A - - , 1.38629 1.38629 1.38629 1.38629 0.01311 5.03403 5.03403 1.46634 0.26236 0.08655 2.49002 77 0.73944 1.43169 2.01133 1.89778 197 a - - , 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 78 0.55634 1.65113 1.94290 2.39060 198 A - - , 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 79 1.91847 2.62972 0.45572 1.91678 199 G - - , 1.38629 1.38629 1.38629 1.38629 0.02906 3.77589 5.16292 0.44154 1.03015 1.09861 0.40547 80 2.21026 2.90948 0.34685 2.04861 201 G - - , 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 81 0.01695 5.41377 5.00825 5.17221 202 A - - , 1.38629 1.38629 1.38629 1.38629 0.03063 5.16292 3.71166 1.46634 0.26236 1.09861 0.40547 82 4.77905 0.11601 4.64149 2.39154 203 C - - ) 1.38629 1.38629 1.38629 1.38629 0.03073 5.14403 3.71200 1.46634 0.26236 1.83554 0.17379 83 1.11840 1.22834 1.74162 1.58386 204 a - - ) 1.38629 1.38629 1.38629 1.38629 0.05235 5.12526 3.09971 1.46634 0.26236 0.79535 0.60043 84 2.11416 2.56670 0.36226 2.24078 205 G - - ) 1.38629 1.38629 1.38629 1.38629 0.01220 5.10537 5.10537 1.46634 0.26236 0.52135 0.90071 85 1.00360 1.31249 1.84967 1.57503 206 a - - ) 1.38629 1.38629 1.38629 1.38629 0.01173 5.14450 5.14450 1.46634 0.26236 0.39045 1.12933 86 1.53439 2.03411 0.99527 1.25881 207 g - - ) 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 87 1.37697 1.51391 1.12370 1.59684 208 g - - ) 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 88 1.63712 1.59812 1.01610 1.42222 209 g - - ) 1.38629 1.38629 1.38629 1.38629 0.01152 5.16292 5.16292 1.46634 0.26236 1.09861 0.40547 89 1.37348 1.87749 0.98289 1.51607 210 g - - ) 1.38629 1.38629 1.38629 1.38629 0.01169 5.14761 5.14761 1.46634 0.26236 1.09861 0.40547 90 1.55914 1.63313 0.86553 1.75136 211 g - - : 1.38629 1.38629 1.38629 1.38629 0.03668 5.03540 3.52301 1.46634 0.26236 1.09861 0.40547 91 1.15613 1.66359 1.20186 1.63369 212 a - - : 1.38629 1.38629 1.38629 1.38629 0.01340 5.01212 5.01212 1.46634 0.26236 1.87756 0.16601 92 0.92828 1.63208 1.50605 1.67420 213 a - - : 1.38629 1.38629 1.38629 1.38629 0.01340 5.01212 5.01212 1.46634 0.26236 1.87756 0.16601 93 1.22789 1.70528 1.13273 1.59349 214 g - - : 1.38629 1.38629 1.38629 1.38629 0.01366 4.99299 4.99299 1.46634 0.26236 1.87756 0.16601 94 1.16446 2.01869 0.79063 2.28749 215 g - - : 1.38629 1.38629 1.38629 1.38629 0.00686 4.98619 * 1.46634 0.26236 0.00000 * //