INFERNAL1/a [1.1.5 | Sep 2023] NAME EAV_LTH ACC RF00498 DESC Equine arteritis virus leader TRS hairpin (LTH) STATES 139 NODES 36 CLEN 45 W 60 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 16 22:46:10 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00498/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 6 EFFN 2.739258 CKSUM 1662523561 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 76.90 NC 40.40 EFP7GF -10.9844 0.71954 ECMLC 0.75309 -4.24385 3.70162 1600000 476248 0.002520 ECMGC 0.46328 -17.55462 -3.20849 1600000 307984 0.001299 ECMLI 0.73532 -3.43877 4.39398 1600000 380649 0.003153 ECMGI 0.47582 -14.43560 -1.19903 1600000 217451 0.001839 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 60 80 -9.229 -9.168 -0.019 -7.945 -8.224 -8.619 IL 1 1 2 1 6 1 2 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 2 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 45 U A - - MP 3 2 3 7 6 2 6 60 80 -9.229 -9.168 -0.019 -7.945 -8.224 -8.619 -4.891 -4.727 -4.648 -0.979 -3.452 -5.145 0.885 -4.192 -4.648 -0.811 -4.985 -2.605 3.581 -5.010 -1.112 -3.388 ML 4 2 3 7 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 0 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 2 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 2 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 44 G C - - MP 9 8 6 13 6 2 6 58 78 -9.229 -9.168 -0.019 -7.945 -8.224 -8.619 -5.288 -3.359 -5.460 -0.177 -5.997 -4.900 -1.225 -5.726 -4.666 3.746 -4.967 -1.085 -1.597 -4.820 -3.295 -4.328 ML 10 8 6 13 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 0 54 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 2 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 2 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 43 C G - - MP 15 14 6 19 6 2 6 56 76 -9.229 -9.168 -0.019 -7.945 -8.224 -8.619 -5.169 -5.127 -4.750 -1.314 -3.346 -5.079 3.704 -4.218 -4.827 -1.146 -5.014 -3.089 0.097 -5.195 -1.074 -3.648 ML 16 14 6 19 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 52 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 1 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 2 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 42 C G - - MP 21 20 6 25 6 2 5 54 74 -9.229 -9.168 -0.019 -7.945 -8.224 -8.619 -5.169 -5.127 -4.750 -1.314 -3.346 -5.079 3.704 -4.218 -4.827 -1.146 -5.014 -3.089 0.097 -5.195 -1.074 -3.648 ML 22 20 6 25 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 41 A U - - MP 27 26 6 31 6 2 4 52 72 -9.229 -9.168 -0.019 -7.945 -8.224 -8.619 -4.319 -3.227 -4.287 3.589 -4.907 -6.032 -0.570 -4.292 -4.171 0.506 -4.744 -0.627 -0.984 -5.122 -2.508 -3.099 ML 28 26 6 31 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 1 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 40 U A - - MP 33 32 6 37 4 2 2 50 70 -7.247 -7.454 -0.043 -5.868 -4.891 -4.727 -4.648 -0.979 -3.452 -5.145 0.885 -4.192 -4.648 -0.811 -4.985 -2.605 3.581 -5.010 -1.112 -3.388 ML 34 32 6 37 4 1 1 51 70 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 1 50 70 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 0 49 69 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 1 52 72 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - C - - - ML 39 38 6 41 3 1 1 48 67 -8.617 -0.016 -6.935 -2.427 1.767 -3.256 -1.706 D 40 38 6 41 3 0 0 47 66 -5.620 -0.734 -1.403 IL 41 41 3 41 3 1 1 49 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 39 - U - - MR 42 41 3 44 5 1 1 47 66 -7.340 -0.033 -7.155 -7.368 -8.259 -2.015 -1.921 -2.771 1.741 D 43 41 3 44 5 0 0 45 65 -5.352 -0.707 -2.978 -4.409 -2.404 IR 44 44 3 44 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 38 G C - - MP 45 44 3 49 6 2 2 46 65 -9.229 -9.168 -0.019 -7.945 -8.224 -8.619 -5.288 -3.359 -5.460 -0.177 -5.997 -4.900 -1.225 -5.726 -4.666 3.746 -4.967 -1.085 -1.597 -4.820 -3.295 -4.328 ML 46 44 3 49 6 1 1 44 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 3 49 6 1 1 44 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 3 49 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 45 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 37 U A - - MP 51 50 6 55 6 2 2 44 63 -9.229 -9.168 -0.019 -7.945 -8.224 -8.619 -4.891 -4.727 -4.648 -0.979 -3.452 -5.145 0.885 -4.192 -4.648 -0.811 -4.985 -2.605 3.581 -5.010 -1.112 -3.388 ML 52 50 6 55 6 1 1 42 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 42 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 43 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 10 36 C G - - MP 57 56 6 61 6 2 2 42 61 -9.229 -9.168 -0.019 -7.945 -8.224 -8.619 -5.169 -5.127 -4.750 -1.314 -3.346 -5.079 3.704 -4.218 -4.827 -1.146 -5.014 -3.089 0.097 -5.195 -1.074 -3.648 ML 58 56 6 61 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 40 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 38 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 11 35 G C - - MP 63 62 6 67 6 2 2 40 59 -9.229 -9.168 -0.019 -7.945 -8.224 -8.619 -5.288 -3.359 -5.460 -0.177 -5.997 -4.900 -1.225 -5.726 -4.666 3.746 -4.967 -1.085 -1.597 -4.820 -3.295 -4.328 ML 64 62 6 67 6 1 1 39 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 39 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 12 34 U G - - MP 69 68 6 73 4 2 2 38 57 -7.247 -7.454 -0.043 -5.868 -4.663 -4.605 -4.235 -0.889 -2.834 -4.570 1.462 -3.654 -4.282 -0.791 -4.516 -2.591 0.541 -4.691 3.302 -3.126 ML 70 68 6 73 4 1 1 38 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 4 1 1 38 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 72 68 6 73 4 0 0 37 56 -4.568 -4.250 -2.265 -0.520 IL 73 73 5 73 4 1 1 40 59 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 74 74 6 74 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - C - - - ML 75 74 6 77 3 1 1 35 54 -8.244 -0.017 -6.898 -2.427 1.767 -3.256 -1.706 D 76 74 6 77 3 0 0 34 53 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - G - - - ML 78 77 3 80 3 1 1 34 53 -8.244 -0.017 -6.898 -2.164 -3.466 1.827 -2.851 D 79 77 3 80 3 0 0 33 52 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - A - - - ML 81 80 3 83 3 1 1 33 52 -8.244 -0.017 -6.898 1.817 -2.938 -2.514 -2.538 D 82 80 3 83 3 0 0 32 51 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - U - - - ML 84 83 3 86 3 1 1 32 51 -8.244 -0.017 -6.898 -2.015 -1.921 -2.771 1.741 D 85 83 3 86 3 0 0 31 50 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - C - - - ML 87 86 3 89 3 1 1 31 50 -8.244 -0.017 -6.898 -2.427 1.767 -3.256 -1.706 D 88 86 3 89 3 0 0 30 49 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - U - - - ML 90 89 3 92 3 1 1 30 49 -8.244 -0.017 -6.898 -2.015 -1.921 -2.771 1.741 D 91 89 3 92 3 0 0 29 48 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 32 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - C - - - ML 93 92 3 95 3 1 1 29 48 -8.244 -0.017 -6.898 -2.427 1.767 -3.256 -1.706 D 94 92 3 95 3 0 0 28 47 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - U - - - ML 96 95 3 98 3 1 1 28 47 -8.244 -0.017 -6.898 -2.015 -1.921 -2.771 1.741 D 97 95 3 98 3 0 0 27 46 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 21 - A - - - ML 99 98 3 101 3 1 1 27 46 -8.244 -0.017 -6.898 1.817 -2.938 -2.514 -2.538 D 100 98 3 101 3 0 0 26 45 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - U - - - ML 102 101 3 104 3 1 1 25 44 -8.244 -0.017 -6.898 -2.015 -1.921 -2.771 1.741 D 103 101 3 104 3 0 0 25 44 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 23 - C - - - ML 105 104 3 107 3 1 1 24 43 -8.244 -0.017 -6.898 -2.427 1.767 -3.256 -1.706 D 106 104 3 107 3 0 0 23 42 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 24 - A - - - ML 108 107 3 110 3 1 1 23 42 -8.244 -0.017 -6.898 1.817 -2.938 -2.514 -2.538 D 109 107 3 110 3 0 0 22 41 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 25 - A - - - ML 111 110 3 113 3 1 1 22 41 -8.244 -0.017 -6.898 1.817 -2.938 -2.514 -2.538 D 112 110 3 113 3 0 0 21 40 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 26 - C - - - ML 114 113 3 116 3 1 1 21 40 -8.244 -0.017 -6.898 -2.427 1.767 -3.256 -1.706 D 115 113 3 116 3 0 0 20 39 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 27 - U - - - ML 117 116 3 119 3 1 1 20 38 -8.244 -0.017 -6.898 -2.015 -1.921 -2.771 1.741 D 118 116 3 119 3 0 0 19 38 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 28 - A - - - ML 120 119 3 122 3 1 1 19 37 -8.244 -0.017 -6.898 1.817 -2.938 -2.514 -2.538 D 121 119 3 122 3 0 0 18 37 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 29 - c - - - ML 123 122 3 125 3 1 1 17 36 -8.244 -0.017 -6.898 -1.041 0.949 -1.875 0.390 D 124 122 3 125 3 0 0 17 36 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 30 - C - - - ML 126 125 3 128 3 1 1 16 35 -8.244 -0.017 -6.898 -2.427 1.767 -3.256 -1.706 D 127 125 3 128 3 0 0 16 34 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - C - - - ML 129 128 3 131 3 1 1 15 33 -8.244 -0.017 -6.898 -2.427 1.767 -3.256 -1.706 D 130 128 3 131 3 0 0 15 33 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 32 - U - - - ML 132 131 3 134 3 1 1 13 31 -8.244 -0.017 -6.898 -1.182 -0.463 -1.937 1.363 D 133 131 3 134 3 0 0 13 32 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - U - - - ML 135 134 3 137 2 1 1 1 1 * 0.000 -2.015 -1.921 -2.771 1.741 D 136 134 3 137 2 0 0 0 0 * 0.000 IL 137 137 3 137 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 35 ] - - - - - - E 138 137 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME EAV_LTH ACC RF00498 DESC Equine arteritis virus leader TRS hairpin (LTH) LENG 45 MAXL 120 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 16 22:46:10 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00498/CM NSEQ 6 EFFN 3.319336 CKSUM 1662523561 STATS LOCAL MSV -7.6555 0.71954 STATS LOCAL VITERBI -7.5460 0.71954 STATS LOCAL FORWARD -3.8035 0.71954 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.55246 1.15884 1.64070 1.27090 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 0.00000 * 1 3.53301 2.30316 3.30981 0.18114 1 U - - < 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 2 2.87463 3.67565 0.11487 3.62138 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 3 3.65843 0.15316 3.47303 2.46259 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 4 3.64954 0.15376 3.46834 2.46094 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 5 0.20479 3.31031 2.21977 3.21774 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 6 3.48323 2.29852 3.28473 0.18460 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 7 3.35092 0.12295 3.91633 2.80144 7 C - - - 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 8 2.86208 3.65825 0.11689 3.59765 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 9 3.48505 2.29869 3.28565 0.18447 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 10 3.64026 0.15440 3.46343 2.45921 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 11 2.86041 3.65594 0.11716 3.59451 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 12 3.30219 1.79330 3.14219 0.28289 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 13 3.35092 0.12295 3.91633 2.80144 13 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 14 3.11853 4.04693 0.09276 3.61601 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 15 0.09893 3.65911 3.34427 3.40656 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 16 3.01081 2.90847 3.54138 0.14247 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 17 3.35092 0.12295 3.91633 2.80144 17 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 18 3.01081 2.90847 3.54138 0.14247 18 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 19 3.35092 0.12295 3.91633 2.80144 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 20 3.01081 2.90847 3.54138 0.14247 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 21 0.09893 3.65911 3.34427 3.40656 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 22 3.01081 2.90847 3.54138 0.14247 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 23 3.35092 0.12295 3.91633 2.80143 23 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 24 0.09893 3.65911 3.34427 3.40656 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 25 0.09893 3.65911 3.34427 3.40656 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 26 3.35092 0.12295 3.91633 2.80144 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 27 3.01081 2.90847 3.54138 0.14247 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 28 0.09893 3.65911 3.34427 3.40656 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 29 2.22955 0.67878 2.82352 1.12150 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 30 3.35092 0.12295 3.91633 2.80144 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 31 3.35092 0.12295 3.91633 2.80144 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 32 2.34452 1.73272 2.87143 0.39945 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 33 3.01081 2.90847 3.54138 0.14247 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 34 2.37584 3.32590 0.19455 3.03829 34 G - - > 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 35 3.77736 0.14030 3.50227 2.55240 35 C - - > 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 36 2.74260 3.63269 0.13232 3.40854 36 G - - > 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 37 0.20877 3.48262 2.13544 3.23150 37 A - - > 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 38 3.80302 0.13880 3.51447 2.55710 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 39 3.01081 2.90847 3.54138 0.14247 39 U - - - 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 40 0.20942 3.47697 2.13451 3.22528 40 A - - > 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 41 3.44059 2.56317 3.11808 0.16646 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 42 2.74494 3.63633 0.13188 3.41266 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 43 2.74852 3.64192 0.13121 3.41899 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 44 3.82096 0.13777 3.52290 2.56033 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.03324 4.11366 4.11366 1.46634 0.26236 1.09861 0.40547 45 0.20618 3.50536 2.13911 3.25654 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.01676 4.09717 * 1.46634 0.26236 0.00000 * //