INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD37 ACC RF00440 DESC Small nucleolar RNA SNORD37 STATES 199 NODES 65 CLEN 65 W 83 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 01:57:54 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00440/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 6 EFFN 3.026367 CKSUM 1107187011 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 45.00 NC 44.90 EFP7GF -9.9969 0.71883 ECMLC 0.58233 -7.82413 1.96011 1600000 357790 0.003354 ECMGC 0.38886 -16.56978 -2.18643 1600000 107435 0.003723 ECMLI 0.57823 -5.74356 3.58887 1600000 264701 0.004533 ECMGI 0.41931 -11.78442 0.99741 1600000 85056 0.004703 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 83 103 -9.270 -9.209 -0.019 -7.985 -8.265 -8.660 IL 1 1 2 1 6 1 24 84 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 24 84 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 68 c g - - MP 3 2 3 7 6 2 25 83 103 -9.270 -9.209 -0.019 -7.985 -8.265 -8.660 -0.320 -0.115 -0.591 1.123 -0.615 -2.584 1.392 -2.084 -1.800 0.944 -0.748 -0.438 1.282 -1.873 0.007 -1.003 ML 4 2 3 7 6 1 22 82 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 20 82 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 17 80 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 23 82 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 23 82 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 67 c g - - MP 9 8 6 13 4 2 23 81 101 -7.339 -7.546 -0.040 -5.960 -1.978 -2.141 -0.430 0.908 -1.998 -2.984 1.925 -2.409 -2.206 0.873 -2.765 -0.681 1.259 -2.297 1.042 0.088 ML 10 8 6 13 4 1 21 81 101 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 4 1 18 80 101 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 12 8 6 13 4 0 17 79 100 -4.568 -4.250 -2.265 -0.520 IL 13 13 5 13 4 1 22 82 103 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 14 14 6 14 3 1 22 81 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - u - - - ML 15 14 6 17 3 1 21 78 98 -8.331 -0.016 -6.985 0.116 -0.371 -1.238 0.781 D 16 14 6 17 3 0 16 77 97 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 21 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - C - - - ML 18 17 3 20 3 1 21 77 97 -8.331 -0.016 -6.985 -1.003 1.194 -0.745 -0.696 D 19 17 3 20 3 0 16 76 96 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 20 79 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 21 20 3 23 3 1 20 76 96 -8.331 -0.016 -6.985 1.446 -1.965 -0.594 -1.484 D 22 20 3 23 3 0 15 75 95 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 19 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 24 23 3 26 3 1 19 75 95 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 25 23 3 26 3 0 14 74 94 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 18 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 27 26 3 29 3 1 18 74 94 -8.331 -0.016 -6.985 -2.338 -3.659 1.849 -3.042 D 28 26 3 29 3 0 13 73 93 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 18 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 30 29 3 32 3 1 17 73 93 -8.331 -0.016 -6.985 1.839 -3.113 -2.673 -2.731 D 31 29 3 32 3 0 13 72 92 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 17 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 33 32 3 35 3 1 16 72 92 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 34 32 3 35 3 0 12 71 91 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 16 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 36 35 3 38 3 1 15 71 91 -8.331 -0.016 -6.985 -0.320 -2.251 1.422 -1.689 D 37 35 3 38 3 0 11 70 90 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 15 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 39 38 3 41 3 1 14 70 90 -8.331 -0.016 -6.985 1.839 -3.113 -2.673 -2.731 D 40 38 3 41 3 0 11 69 89 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 14 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - c - - - ML 42 41 3 44 3 1 13 69 89 -8.331 -0.016 -6.985 -0.594 0.669 -0.649 0.150 D 43 41 3 44 3 0 10 68 88 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 13 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 45 44 3 47 3 1 12 68 88 -8.331 -0.016 -6.985 -0.941 -1.224 -0.877 1.326 D 46 44 3 47 3 0 9 67 87 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 12 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - g - - - ML 48 47 3 50 3 1 11 67 87 -8.331 -0.016 -6.985 -0.031 -1.239 0.755 -0.136 D 49 47 3 50 3 0 9 65 85 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 12 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 51 50 3 53 3 1 11 66 86 -2.097 -1.049 -1.822 1.839 -3.113 -2.673 -2.731 D 52 50 3 53 3 0 8 64 84 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 12 66 86 -2.199 -0.417 -4.899 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - c - - - ML 54 53 3 56 3 1 11 65 84 -7.867 -0.022 -6.521 0.347 0.508 -1.119 -0.241 D 55 53 3 56 3 0 8 63 83 -8.271 -0.254 -2.662 IL 56 56 3 56 3 1 10 66 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - A - - - ML 57 56 3 59 3 1 11 63 83 -8.331 -0.016 -6.985 1.310 -0.609 -1.510 -0.962 D 58 56 3 59 3 0 4 62 82 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - a - - - ML 60 59 3 62 3 1 10 62 82 -8.331 -0.016 -6.985 0.957 -1.142 -1.280 0.255 D 61 59 3 62 3 0 3 61 81 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - U - - - ML 63 62 3 65 3 1 9 61 81 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 64 62 3 65 3 0 3 60 80 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 8 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - U - - - ML 66 65 3 68 3 1 8 60 80 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 67 65 3 68 3 0 2 59 79 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 7 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - C - - - ML 69 68 3 71 3 1 8 59 79 -8.331 -0.016 -6.985 -2.637 1.798 -3.461 -1.878 D 70 68 3 71 3 0 1 58 78 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - U - - - ML 72 71 3 74 3 1 7 58 78 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 73 71 3 74 3 0 0 57 77 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - U - - - ML 75 74 3 77 3 1 6 57 77 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 76 74 3 77 3 0 0 56 76 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - C - - - ML 78 77 3 80 3 1 6 56 76 -8.331 -0.016 -6.985 -2.637 1.798 -3.461 -1.878 D 79 77 3 80 3 0 0 55 75 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - A - - - ML 81 80 3 83 3 1 5 55 75 -8.331 -0.016 -6.985 1.839 -3.113 -2.673 -2.731 D 82 80 3 83 3 0 0 54 73 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - C - - - ML 84 83 3 86 3 1 5 54 74 -8.331 -0.016 -6.985 -0.399 1.243 -1.924 -0.711 D 85 83 3 86 3 0 0 53 72 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - U - - - ML 87 86 3 89 3 1 4 53 73 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 88 86 3 89 3 0 0 52 71 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - U - - - ML 90 89 3 92 3 1 4 52 71 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 91 89 3 92 3 0 0 51 70 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - U - - - ML 93 92 3 95 3 1 3 51 70 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 94 92 3 95 3 0 0 50 69 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - G - - - ML 96 95 3 98 3 1 3 50 69 -8.331 -0.016 -6.985 -2.338 -3.659 1.849 -3.042 D 97 95 3 98 3 0 0 49 68 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - A - - - ML 99 98 3 101 3 1 2 49 68 -8.331 -0.016 -6.985 1.839 -3.113 -2.673 -2.731 D 100 98 3 101 3 0 0 48 67 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - C - - - ML 102 101 3 104 3 1 2 48 67 -8.331 -0.016 -6.985 -2.637 1.798 -3.461 -1.878 D 103 101 3 104 3 0 0 46 66 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - C - - - ML 105 104 3 107 3 1 2 47 66 -8.331 -0.016 -6.985 -2.637 1.798 -3.461 -1.878 D 106 104 3 107 3 0 0 45 65 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - U - - - ML 108 107 3 110 3 1 1 46 65 -8.331 -0.016 -6.985 -0.438 -1.230 -1.720 1.340 D 109 107 3 110 3 0 0 44 64 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - G - - - ML 111 110 3 113 3 1 1 45 64 -2.926 -0.217 -6.985 -2.338 -3.659 1.849 -3.042 D 112 110 3 113 3 0 0 43 62 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 45 64 -1.911 -0.529 -4.611 0.000 0.000 0.000 0.000 [ MATL 36 ] 38 - A - - - ML 114 113 3 116 3 1 1 43 62 -8.331 -0.016 -6.985 1.839 -3.113 -2.673 -2.731 D 115 113 3 116 3 0 0 42 61 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - U - - - ML 117 116 3 119 3 1 1 42 61 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 118 116 3 119 3 0 0 41 60 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - G - - - ML 120 119 3 122 3 1 1 41 60 -8.331 -0.016 -6.985 -0.189 -2.170 1.363 -1.607 D 121 119 3 122 3 0 0 40 59 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - U - - - ML 123 122 3 125 3 1 1 40 59 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 124 122 3 125 3 0 0 39 58 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - C - - - ML 126 125 3 128 3 1 1 39 58 -8.331 -0.016 -6.985 -1.082 1.260 -0.897 -0.746 D 127 125 3 128 3 0 0 38 57 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - U - - - ML 129 128 3 131 3 1 1 38 57 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 130 128 3 131 3 0 0 37 56 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - a - - - ML 132 131 3 134 3 1 1 37 56 -8.331 -0.016 -6.985 0.365 -1.103 0.344 -0.033 D 133 131 3 134 3 0 0 36 55 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - u - - - ML 135 134 3 137 3 1 1 36 55 -8.331 -0.016 -6.985 -0.561 -0.414 -0.547 0.916 D 136 134 3 137 3 0 0 34 54 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 46 - U - - - ML 138 137 3 140 3 1 1 35 54 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 139 137 3 140 3 0 0 33 53 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 47 - G - - - ML 141 140 3 143 3 1 1 34 53 -8.331 -0.016 -6.985 -2.338 -3.659 1.849 -3.042 D 142 140 3 143 3 0 0 32 52 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 48 - A - - - ML 144 143 3 146 3 1 1 32 51 -8.331 -0.016 -6.985 1.839 -3.113 -2.673 -2.731 D 145 143 3 146 3 0 0 31 50 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 49 - A - - - ML 147 146 3 149 3 1 1 31 50 -8.331 -0.016 -6.985 1.285 -1.409 -1.472 -0.274 D 148 146 3 149 3 0 0 30 49 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 50 - G - - - ML 150 149 3 152 3 1 1 30 49 -8.331 -0.016 -6.985 -2.338 -3.659 1.849 -3.042 D 151 149 3 152 3 0 0 29 48 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 51 - A - - - ML 153 152 3 155 3 1 1 29 48 -2.926 -0.217 -6.985 1.839 -3.113 -2.673 -2.731 D 154 152 3 155 3 0 0 27 46 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 30 48 -1.911 -0.529 -4.611 0.000 0.000 0.000 0.000 [ MATL 50 ] 53 - A - - - ML 156 155 3 158 3 1 1 28 47 -8.331 -0.016 -6.985 1.839 -3.113 -2.673 -2.731 D 157 155 3 158 3 0 0 27 46 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 54 - A - - - ML 159 158 3 161 3 1 1 27 45 -8.331 -0.016 -6.985 1.839 -3.113 -2.673 -2.731 D 160 158 3 161 3 0 0 26 45 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 55 - c - - - ML 162 161 3 164 3 1 1 25 44 -8.331 -0.016 -6.985 0.016 0.234 -0.541 0.171 D 163 161 3 164 3 0 0 24 43 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 56 - U - - - ML 165 164 3 167 3 1 1 24 43 -8.331 -0.016 -6.985 -1.064 0.177 -1.851 1.080 D 166 164 3 167 3 0 0 23 42 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 57 - C - - - ML 168 167 3 170 3 1 1 23 42 -8.331 -0.016 -6.985 -1.361 1.278 -2.224 -0.042 D 169 167 3 170 3 0 0 22 41 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 58 - u - - - ML 171 170 3 173 3 1 1 22 41 -8.331 -0.016 -6.985 0.210 -1.056 -1.369 0.982 D 172 170 3 173 3 0 0 21 40 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 59 - G - - - ML 174 173 3 176 3 1 1 21 40 -8.331 -0.016 -6.985 -0.853 -0.794 1.268 -1.116 D 175 173 3 176 3 0 0 20 39 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 60 - u - - - ML 177 176 3 179 3 1 1 20 38 -8.331 -0.016 -6.985 -0.051 0.143 -1.285 0.604 D 178 176 3 179 3 0 0 19 38 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 61 - g - - - ML 180 179 3 182 3 1 1 18 37 -8.331 -0.016 -6.985 0.506 -1.825 0.909 -1.252 D 181 179 3 182 3 0 0 18 37 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 62 - U - - - ML 183 182 3 185 3 1 1 17 36 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 184 182 3 185 3 0 0 17 36 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 63 - C - - - ML 186 185 3 188 3 1 1 16 34 -8.331 -0.016 -6.985 -2.637 1.798 -3.461 -1.878 D 187 185 3 188 3 0 0 16 34 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 64 - U - - - ML 189 188 3 191 3 1 1 15 33 -8.331 -0.016 -6.985 -2.183 -2.062 -2.944 1.770 D 190 188 3 191 3 0 0 15 33 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 65 - G - - - ML 192 191 3 194 3 1 1 13 31 -8.331 -0.016 -6.985 -2.338 -3.659 1.849 -3.042 D 193 191 3 194 3 0 0 13 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 66 - A - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 1.839 -3.113 -2.673 -2.731 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 64 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD37 ACC RF00440 DESC Small nucleolar RNA SNORD37 LENG 65 MAXL 146 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 01:57:54 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00440/CM NSEQ 6 EFFN 3.120117 CKSUM 1107187011 STATS LOCAL MSV -7.8404 0.71883 STATS LOCAL VITERBI -8.7992 0.71883 STATS LOCAL FORWARD -3.5642 0.71883 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.25973 1.65193 1.60902 1.12545 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 0.00000 * 1 1.24778 1.47139 1.50808 1.33973 1 a - - < 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 2 1.63919 1.29989 1.74511 1.02534 2 u - - < 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 3 1.30582 1.64478 2.25295 0.84187 3 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 4 2.10471 0.54765 1.90786 1.88774 4 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 5 0.37848 2.77052 1.80009 2.43974 5 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 6 2.93598 2.84569 3.46451 0.15369 6 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 7 3.04356 3.96385 0.10071 3.53515 7 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 8 0.10736 3.58174 3.27365 3.32129 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 9 2.93598 2.84569 3.46451 0.15369 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 10 1.61499 2.97028 0.39414 2.58282 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 11 0.10736 3.58174 3.27365 3.32129 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 12 1.80919 0.91490 1.83823 1.28534 12 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 13 2.05727 2.25184 1.99960 0.45949 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 14 1.41189 2.25658 0.85594 1.48402 14 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 15 0.10736 3.58174 3.27365 3.32129 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.81563 1.35531 1.20474 0.12151 2.16788 1.09861 0.40547 16 1.14543 1.02683 2.17224 1.56136 17 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04639 3.78692 3.78692 1.46634 0.26236 0.10287 2.32532 17 0.47124 1.81010 2.45090 2.07210 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 18 0.71753 2.18988 2.28540 1.20938 19 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 19 2.93598 2.84569 3.46451 0.15369 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 20 2.93598 2.84569 3.46451 0.15369 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 21 3.25924 0.13431 3.82893 2.72521 22 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 22 2.93598 2.84569 3.46451 0.15369 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 23 2.93598 2.84569 3.46451 0.15369 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 24 3.25924 0.13431 3.82893 2.72521 25 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 25 0.10736 3.58174 3.27365 3.32129 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 26 1.67130 0.51484 2.74473 1.89623 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 27 2.93598 2.84569 3.46451 0.15369 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 28 2.93598 2.84569 3.46451 0.15369 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 29 2.93598 2.84569 3.46451 0.15369 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 30 3.04356 3.96385 0.10071 3.53515 31 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 31 0.10736 3.58174 3.27365 3.32129 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 32 3.25924 0.13431 3.82893 2.72521 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 33 3.25924 0.13431 3.82893 2.72521 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 34 1.69720 2.25605 2.59788 0.45003 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 35 3.04356 3.96385 0.10071 3.53515 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.18371 1.88664 4.12034 0.20201 1.69876 1.09861 0.40547 36 0.10736 3.58174 3.27365 3.32129 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 37 2.93598 2.84569 3.46451 0.15369 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 38 1.52288 2.91375 0.43447 2.52530 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 39 2.93598 2.84569 3.46451 0.15369 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 40 2.16156 0.50182 2.01481 1.92359 42 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 41 2.93598 2.84569 3.46451 0.15369 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 42 1.13342 2.15966 1.14319 1.41099 44 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 43 1.78474 1.67495 1.76546 0.74711 45 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 44 2.93598 2.84569 3.46451 0.15369 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 45 3.04356 3.96385 0.10071 3.53515 47 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 46 0.10736 3.58174 3.27365 3.32129 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 47 0.48977 2.37782 2.42246 1.58096 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 48 3.04356 3.96385 0.10071 3.53515 50 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 49 0.10736 3.58174 3.27365 3.32129 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.18371 1.88664 4.12034 0.20201 1.69876 1.09861 0.40547 50 0.10736 3.58174 3.27365 3.32129 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 51 0.10736 3.58174 3.27365 3.32129 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 52 1.37761 1.21973 1.76232 1.26989 55 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 53 2.14282 1.26070 2.68939 0.63243 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 54 2.35334 0.49227 2.95396 1.42057 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 55 1.24096 2.13044 2.34767 0.70014 58 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 56 1.99735 1.94037 0.49765 2.18303 59 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 57 1.42373 1.28329 2.28690 0.96632 60 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 58 1.03409 2.67207 0.74934 2.27631 61 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 59 2.93598 2.84569 3.46451 0.15369 62 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 60 3.25924 0.13431 3.82893 2.72521 63 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 61 2.93598 2.84569 3.46451 0.15369 64 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 62 3.04356 3.96385 0.10071 3.53515 65 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 63 0.10736 3.58174 3.27365 3.32129 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 64 1.63988 1.91110 0.85844 1.45134 67 g - - > 1.38629 1.38629 1.38629 1.38629 0.03302 4.12034 4.12034 1.46634 0.26236 1.09861 0.40547 65 1.34140 1.58140 1.18601 1.48106 68 g - - > 1.38629 1.38629 1.38629 1.38629 0.01664 4.10397 * 1.46634 0.26236 0.00000 * //