INFERNAL1/a [1.1.4 | Dec 2020] NAME HIV_GSL3 ACC RF00376 DESC HIV gag stem loop 3 (GSL3) STATES 256 NODES 78 CLEN 84 W 101 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:34:30 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 72 EFFN 2.113770 CKSUM 3389361131 NULL 0.000 0.000 0.000 0.000 GA 42.00 TC 42.00 NC 41.90 EFP7GF -8.2413 0.71860 ECMLC 0.61020 -5.95119 3.27851 1600000 335064 0.003581 ECMGC 0.41619 -16.53404 -3.65395 1600000 85141 0.004698 ECMLI 0.58943 -3.91234 5.16196 1600000 252386 0.004755 ECMGI 0.46009 -10.41480 0.58196 1600000 63002 0.006349 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 101 122 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 IL 1 1 2 1 6 1 33 103 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 34 103 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 85 G C - - MP 3 2 3 7 6 3 38 101 122 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.589 -1.541 -3.587 0.880 -4.088 -2.877 0.231 -4.082 -3.698 3.262 -4.054 -0.087 -0.032 -3.440 -1.658 -2.628 ML 4 2 3 7 6 1 31 100 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 31 100 120 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 25 97 118 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 33 101 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 33 101 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 84 g c - - MP 9 8 6 13 6 2 37 99 120 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.004 -1.760 -3.038 1.180 -3.405 -2.614 0.644 -3.498 -2.650 2.951 -3.624 0.239 0.404 -3.005 -1.152 -2.125 ML 10 8 6 13 6 1 30 98 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 30 98 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 25 95 116 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 32 99 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 33 99 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 83 C G - - MP 15 14 6 19 6 2 36 97 118 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.471 -3.565 -3.547 -0.254 -1.474 -2.564 3.442 -3.620 -3.607 -0.174 -4.068 -1.899 0.473 -3.745 -0.976 -2.661 ML 16 14 6 19 6 1 30 96 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 29 96 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 24 93 114 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 32 97 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 32 97 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 82 C G - - MP 21 20 6 25 6 2 34 95 116 -9.136 -9.075 -0.025 -7.852 -7.285 -8.527 -3.407 -3.454 -3.423 0.064 -0.396 -4.110 3.191 -2.378 -3.451 0.184 -3.903 -1.632 0.944 -3.639 -0.463 -2.426 ML 22 20 6 25 6 1 29 94 114 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 29 94 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 24 91 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 31 95 116 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 31 95 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 81 a u - - MP 27 26 6 31 6 2 33 93 114 -9.132 -9.071 -0.021 -7.848 -8.127 -8.522 -2.011 -1.711 -2.778 2.460 -2.936 -3.639 0.883 -3.096 -2.863 1.825 -3.370 0.333 0.703 -2.909 -0.853 -1.872 ML 28 26 6 31 6 1 28 92 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 28 92 112 -7.035 -5.764 -1.531 -5.742 -0.876 -3.956 0.518 -0.489 -0.203 -0.019 D 30 26 6 31 6 0 23 89 110 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 30 93 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 30 93 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 80 G C - - MP 33 32 6 37 6 2 31 91 112 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.031 -2.310 -4.040 0.672 -4.600 -4.352 -0.081 -4.478 -3.985 3.435 -3.263 -0.302 -0.367 -3.844 -2.048 -3.009 ML 34 32 6 37 6 1 27 90 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 27 90 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 23 88 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 29 91 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 29 91 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 7 79 G C - - MP 39 38 6 43 6 2 29 89 110 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.941 -1.945 -3.932 0.696 -4.474 -3.350 -0.002 -4.428 -3.953 3.403 -4.279 -0.289 -0.282 -3.697 -1.946 -2.945 ML 40 38 6 43 6 1 26 88 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 25 88 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 23 86 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 27 89 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 27 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 8 78 g c - - MP 45 44 6 49 4 2 27 87 108 -7.022 -7.229 -0.050 -5.643 -3.285 -0.886 -3.309 1.352 -3.840 -4.017 0.432 -3.729 -3.423 2.838 -3.826 1.022 0.176 -3.322 -1.442 -2.301 ML 46 44 6 49 4 1 25 87 108 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 4 1 24 87 108 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 48 44 6 49 4 0 22 86 107 -4.568 -4.250 -2.265 -0.520 IL 49 49 5 49 4 1 26 89 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 50 50 6 50 3 1 26 88 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 51 50 6 53 3 1 25 85 106 -8.033 -0.027 -6.072 -0.628 -1.875 1.393 -1.142 D 52 50 6 53 3 0 22 84 104 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 25 87 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 54 53 3 56 3 1 24 84 104 -8.025 -0.182 -3.124 -0.695 -1.663 1.408 -1.275 D 55 53 3 56 3 0 21 83 103 -6.245 -1.758 -0.533 IL 56 56 3 56 3 1 25 86 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 57 56 3 59 3 1 24 83 104 -7.865 -0.022 -6.519 1.281 -1.212 -0.959 -0.680 D 58 56 3 59 3 0 20 82 102 -7.218 -0.587 -1.610 IL 59 59 3 59 3 1 24 85 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 60 59 3 62 3 1 23 82 102 -8.033 -0.020 -6.687 1.747 -2.510 -2.128 -2.067 D 61 59 3 62 3 0 18 80 101 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 23 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 63 62 3 65 3 1 23 81 101 -3.167 -0.186 -6.687 1.500 -1.568 -1.291 -1.232 D 64 62 3 65 3 0 17 79 99 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 22 82 102 -1.777 -0.592 -4.477 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - G - - - ML 66 65 3 68 3 1 22 80 100 -8.033 -0.020 -6.687 -0.166 -1.056 1.004 -0.684 D 67 65 3 68 3 0 16 78 98 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 21 81 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - A - - - ML 69 68 3 71 3 1 21 79 99 -8.033 -0.020 -6.687 1.691 -2.296 -1.785 -1.853 D 70 68 3 71 3 0 16 77 97 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 20 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - A - - - ML 72 71 3 74 3 1 20 78 98 -8.033 -0.020 -6.687 1.599 -1.898 -1.508 -1.509 D 73 71 3 74 3 0 15 76 96 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 19 79 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - A - - - ML 75 74 3 77 3 1 19 77 97 -8.033 -0.020 -6.687 1.340 -1.346 -0.824 -0.969 D 76 74 3 77 3 0 14 75 95 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 19 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - A - - - ML 78 77 3 80 3 1 18 75 96 -8.033 -0.029 -5.949 1.043 -0.509 -1.136 -0.355 D 79 77 3 80 3 0 13 74 94 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 18 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - A - - - ML 81 80 3 83 3 1 18 74 95 -8.023 -0.042 -5.314 1.052 -1.258 -0.249 -0.584 D 82 80 3 83 3 0 13 73 93 -6.262 -1.775 -0.525 IL 83 83 3 83 3 1 17 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - a - - - ML 84 83 3 86 3 1 17 73 94 -8.001 -0.020 -6.655 0.808 -0.589 -0.492 -0.196 D 85 83 3 86 3 0 12 72 92 -6.450 -1.215 -0.842 IL 86 86 3 86 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - U - - - ML 87 86 3 89 3 1 17 72 93 -8.033 -0.020 -6.687 -1.614 -1.588 -2.353 1.653 D 88 86 3 89 3 0 11 71 91 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 16 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - A - - - ML 90 89 3 92 3 1 16 71 91 -8.033 -0.020 -6.687 1.630 -2.022 -1.806 -1.421 D 91 89 3 92 3 0 10 70 90 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 15 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - U - - - ML 93 92 3 95 3 1 15 70 90 -8.033 -0.020 -6.687 -1.136 -0.827 -1.873 1.437 D 94 92 3 95 3 0 9 69 89 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 14 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - A - - - ML 96 95 3 98 3 1 14 69 89 -8.033 -0.020 -6.687 1.272 -0.865 -1.144 -0.777 D 97 95 3 98 3 0 8 68 88 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 13 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - a - - - ML 99 98 3 101 3 1 14 68 88 -8.033 -0.020 -6.687 0.413 -0.879 0.172 -0.002 D 100 98 3 101 3 0 8 67 87 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 12 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - a - - - ML 102 101 3 104 3 1 13 67 87 -8.033 -0.020 -6.687 0.804 -1.136 0.163 -0.557 D 103 101 3 104 3 0 7 66 86 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 12 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - u - - - ML 105 104 3 107 3 1 12 66 86 -8.033 -0.020 -6.687 0.064 0.225 -1.122 0.408 D 106 104 3 107 3 0 6 65 85 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 11 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - U - - - ML 108 107 3 110 3 1 11 65 85 -8.033 -0.020 -6.687 -1.614 -1.588 -2.353 1.653 D 109 107 3 110 3 0 5 64 84 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 10 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - A - - - ML 111 110 3 113 3 1 11 64 84 -8.033 -0.020 -6.687 1.066 -1.470 0.019 -0.909 D 112 110 3 113 3 0 5 63 83 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 9 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - A - - - ML 114 113 3 116 3 1 10 63 83 -8.033 -0.020 -6.687 1.684 -2.219 -1.937 -1.683 D 115 113 3 116 3 0 4 62 82 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - A - - - ML 117 116 3 119 3 1 9 62 82 -8.033 -0.020 -6.687 1.747 -2.510 -2.128 -2.067 D 118 116 3 119 3 0 3 60 81 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - A - - - ML 120 119 3 122 3 1 9 61 81 -8.033 -0.020 -6.687 1.299 -1.401 -0.628 -0.963 D 121 119 3 122 3 0 2 59 79 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - C - - - ML 123 122 3 125 3 1 8 60 80 -8.033 -0.020 -6.687 -1.909 1.666 -2.737 -1.289 D 124 122 3 125 3 0 2 58 78 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 7 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - A - - - ML 126 125 3 128 3 1 7 59 79 -8.033 -0.020 -6.687 1.608 -1.952 -1.759 -1.326 D 127 125 3 128 3 0 1 57 77 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - U - - - ML 129 128 3 131 3 1 7 58 78 -8.033 -0.020 -6.687 -0.961 -0.435 -1.705 1.287 D 130 128 3 131 3 0 0 56 76 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - a - - - ML 132 131 3 134 3 1 6 57 77 -8.033 -0.020 -6.687 0.326 0.003 -0.972 0.304 D 133 131 3 134 3 0 0 55 75 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - U - - - ML 135 134 3 137 3 1 5 56 75 -8.033 -0.020 -6.687 -1.614 -1.588 -2.353 1.653 D 136 134 3 137 3 0 0 54 74 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - A - - - ML 138 137 3 140 3 1 5 55 74 -8.033 -0.020 -6.687 1.397 -1.427 -1.032 -0.986 D 139 137 3 140 3 0 0 53 73 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - G - - - ML 141 140 3 143 3 1 4 54 73 -8.033 -0.020 -6.687 -0.073 -1.799 1.220 -1.211 D 142 140 3 143 3 0 0 52 72 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - U - - - ML 144 143 3 146 3 1 4 53 72 -8.033 -0.020 -6.687 -1.147 -1.309 -1.964 1.530 D 145 143 3 146 3 0 0 51 71 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 2 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - A - - - ML 147 146 3 149 3 1 3 51 71 -8.033 -0.020 -6.687 1.425 -1.447 -1.159 -1.002 D 148 146 3 149 3 0 0 50 70 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 2 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - U - - - ML 150 149 3 152 3 1 3 50 70 -8.033 -0.020 -6.687 -1.408 -1.294 -2.144 1.580 D 151 149 3 152 3 0 0 49 69 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - G - - - ML 153 152 3 155 3 1 2 49 69 -8.033 -0.020 -6.687 -1.016 -2.451 1.607 -1.858 D 154 152 3 155 3 0 0 48 68 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - G - - - ML 156 155 3 158 3 1 2 48 68 -8.033 -0.020 -6.687 -1.727 -2.969 1.755 -2.357 D 157 155 3 158 3 0 0 47 67 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - G - - - ML 159 158 3 161 3 1 2 47 67 -8.033 -0.020 -6.687 -1.085 -1.883 1.544 -1.548 D 160 158 3 161 3 0 0 46 66 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - C - - - ML 162 161 3 164 3 1 1 46 66 -8.033 -0.020 -6.687 -1.909 1.666 -2.737 -1.289 D 163 161 3 164 3 0 0 45 64 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - A - - - ML 165 164 3 167 3 1 1 45 65 -8.033 -0.020 -6.687 1.672 -2.151 -1.815 -1.713 D 166 164 3 167 3 0 0 44 63 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - A - - - ML 168 167 3 170 3 1 1 44 64 -8.033 -0.020 -6.687 1.653 -2.175 -1.595 -1.724 D 169 167 3 170 3 0 0 43 62 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - G - - - ML 171 170 3 173 3 1 1 43 62 -8.033 -0.020 -6.687 -1.727 -2.969 1.755 -2.357 D 172 170 3 173 3 0 0 42 61 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - C - - - ML 174 173 3 176 3 1 1 42 61 -8.033 -0.020 -6.687 -1.427 1.556 -2.353 -1.021 D 175 173 3 176 3 0 0 41 60 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - A - - - ML 177 176 3 179 3 1 1 41 60 -8.033 -0.020 -6.687 1.747 -2.510 -2.128 -2.067 D 178 176 3 179 3 0 0 40 59 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - G - - - ML 180 179 3 182 3 1 1 40 59 -8.033 -0.020 -6.687 -0.443 -1.703 1.339 -1.224 D 181 179 3 182 3 0 0 39 58 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 54 - G - - - ML 183 182 3 185 3 1 1 39 58 -8.033 -0.020 -6.687 -0.236 -1.901 1.311 -1.313 D 184 182 3 185 3 0 0 37 57 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 55 - G - - - ML 186 185 3 188 3 1 1 38 57 -8.033 -0.020 -6.687 -1.447 -2.772 1.707 -2.169 D 187 185 3 188 3 0 0 36 56 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 56 - A - - - ML 189 188 3 191 3 1 1 37 56 -8.033 -0.020 -6.687 1.593 -2.018 -1.336 -1.554 D 190 188 3 191 3 0 0 35 55 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 57 - G - - - ML 192 191 3 194 3 1 1 36 55 -8.033 -0.020 -6.687 -0.323 -1.958 1.354 -1.370 D 193 191 3 194 3 0 0 34 54 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 58 - C - - - ML 195 194 3 197 3 1 1 34 54 -8.033 -0.020 -6.687 -0.905 1.169 -1.779 -0.112 D 196 194 3 197 3 0 0 33 53 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 59 - U - - - ML 198 197 3 200 3 1 1 33 53 -8.033 -0.020 -6.687 -1.614 -1.588 -2.353 1.653 D 199 197 3 200 3 0 0 32 51 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 60 - a - - - ML 201 200 3 203 3 1 1 32 51 -8.033 -0.020 -6.687 0.751 -1.452 0.489 -0.868 D 202 200 3 203 3 0 0 31 50 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 61 - G - - - ML 204 203 3 206 3 1 1 31 50 -8.033 -0.020 -6.687 -1.484 -2.799 1.714 -2.195 D 205 203 3 206 3 0 0 30 49 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 62 - A - - - ML 207 206 3 209 3 1 1 30 49 -8.033 -0.020 -6.687 1.613 -2.066 -1.417 -1.607 D 208 206 3 209 3 0 0 29 48 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 63 - A - - - ML 210 209 3 212 3 1 1 29 48 -8.033 -0.020 -6.687 1.131 -0.842 -0.778 -0.579 D 211 209 3 212 3 0 0 28 47 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 64 - a - - - ML 213 212 3 215 3 1 1 28 47 -8.033 -0.020 -6.687 0.760 0.068 -1.079 -0.350 D 214 212 3 215 3 0 0 27 46 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 65 - G - - - ML 216 215 3 218 3 1 1 27 46 -8.033 -0.020 -6.687 -0.345 -1.972 1.365 -1.385 D 217 215 3 218 3 0 0 26 45 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 66 - A - - - ML 219 218 3 221 3 1 1 26 45 -8.033 -0.020 -6.687 1.611 -1.982 -1.630 -1.436 D 220 218 3 221 3 0 0 25 44 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 67 - U - - - ML 222 221 3 224 3 1 1 25 43 -8.033 -0.020 -6.687 -1.396 -1.276 -2.132 1.575 D 223 221 3 224 3 0 0 24 43 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 68 - U - - - ML 225 224 3 227 3 1 1 23 42 -8.033 -0.020 -6.687 -1.005 -1.102 -1.818 1.461 D 226 224 3 227 3 0 0 22 41 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 69 - u - - - ML 228 227 3 230 3 1 1 22 41 -8.033 -0.020 -6.687 -0.612 0.414 -1.431 0.716 D 229 227 3 230 3 0 0 21 40 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 70 - G - - - ML 231 230 3 233 3 1 1 21 40 -8.033 -0.020 -6.687 -0.966 -2.180 1.538 -1.463 D 232 230 3 233 3 0 0 20 39 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 71 - C - - - ML 234 233 3 236 3 1 1 20 39 -8.033 -0.020 -6.687 -1.145 1.472 -2.150 -0.866 D 235 233 3 236 3 0 0 19 38 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 72 - A - - - ML 237 236 3 239 3 1 1 19 37 -8.033 -0.020 -6.687 1.379 -1.503 -1.001 -0.869 D 238 236 3 239 3 0 0 18 37 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 73 - c - - - ML 240 239 3 242 3 1 1 17 36 -8.033 -0.020 -6.687 -0.104 0.273 -0.236 0.017 D 241 239 3 242 3 0 0 17 36 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 74 - U - - - ML 243 242 3 245 3 1 1 16 35 -8.033 -0.020 -6.687 -0.801 -0.929 -1.200 1.302 D 244 242 3 245 3 0 0 16 34 -6.174 -1.687 -0.566 IL 245 245 3 245 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 74 ] 75 - U - - - ML 246 245 3 248 3 1 1 15 33 -8.033 -0.020 -6.687 -0.739 -0.532 -1.552 1.244 D 247 245 3 248 3 0 0 15 33 -6.174 -1.687 -0.566 IL 248 248 3 248 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 75 ] 76 - A - - - ML 249 248 3 251 3 1 1 13 31 -8.033 -0.020 -6.687 1.398 -1.588 -0.893 -1.016 D 250 248 3 251 3 0 0 13 32 -6.174 -1.687 -0.566 IL 251 251 3 251 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 76 ] 77 - A - - - ML 252 251 3 254 2 1 1 1 1 * 0.000 1.747 -2.510 -2.128 -2.067 D 253 251 3 254 2 0 0 0 0 * 0.000 IL 254 254 3 254 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 77 ] - - - - - - E 255 254 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME HIV_GSL3 ACC RF00376 DESC HIV gag stem loop 3 (GSL3) LENG 84 MAXL 172 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:34:31 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 72 EFFN 2.491699 CKSUM 3389361131 STATS LOCAL MSV -8.8294 0.71860 STATS LOCAL VITERBI -9.6314 0.71860 STATS LOCAL FORWARD -3.2877 0.71860 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.10379 1.67753 1.33541 1.52095 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 0.00000 * 1 1.94314 2.49408 0.37778 2.42143 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 2 1.74636 2.17901 0.53299 2.07472 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 3 2.77769 0.29347 2.63676 2.11567 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 4 2.55458 0.41967 2.37329 1.76122 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04405 4.03574 3.67223 1.46634 0.26236 1.09861 0.40547 5 0.90253 2.04515 1.17518 1.85576 5 a - - < 1.38629 1.38629 1.38629 1.38629 0.03627 4.02797 4.02797 1.46634 0.26236 0.87149 0.54185 6 2.16276 2.79440 0.28167 2.66901 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 7 2.10107 2.68173 0.30801 2.59939 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 8 1.57240 2.39752 0.51851 2.24332 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 9 1.89149 2.78923 0.37945 2.26869 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04216 4.03574 3.74623 1.46634 0.26236 1.09861 0.40547 10 1.95013 2.61711 0.36709 2.38612 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.17001 4.02979 1.97642 1.46634 0.26236 1.20471 0.35636 11 0.46735 2.27488 2.09613 1.91328 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04128 3.90106 3.90106 1.46634 0.26236 0.21994 1.62234 12 0.14341 3.31079 3.02790 3.02206 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 13 0.31334 2.54698 2.35216 2.34847 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.17313 1.95687 4.03574 0.23374 1.56814 1.09861 0.40547 14 1.54234 2.15754 0.64351 1.93055 15 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 15 0.18113 3.13510 2.74638 2.84703 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 16 0.24530 2.80713 2.52162 2.56630 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 17 0.42527 2.37858 1.99043 2.14482 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 18 0.63127 1.74641 2.23727 1.67700 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04374 4.03574 3.68375 1.46634 0.26236 1.09861 0.40547 19 0.63060 2.31754 1.55841 1.84047 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05477 4.02826 3.33837 1.46634 0.26236 1.23020 0.34564 20 0.80537 1.80485 1.73931 1.54675 21 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03693 4.01041 4.01041 1.46634 0.26236 0.60323 0.79195 21 2.67719 2.62976 3.19724 0.20056 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 22 0.22282 2.91517 2.76628 2.49309 23 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 23 2.28892 2.01458 2.80312 0.35009 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 24 0.46892 2.01080 2.24602 2.00528 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 25 1.09783 2.02714 1.24643 1.39770 26 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 26 0.81070 2.22127 1.25401 1.82250 27 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 27 1.35054 1.20439 2.21016 1.10460 28 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 28 2.67719 2.62976 3.19724 0.20056 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 29 0.61783 2.49269 1.35912 2.10938 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 30 0.18619 3.07175 2.87110 2.70440 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 31 0.14341 3.31079 3.02790 3.02206 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 32 0.45374 2.42457 1.84050 2.14132 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 33 2.93307 0.18473 3.50938 2.45896 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 34 0.23777 2.86039 2.72900 2.41815 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 35 2.15068 1.71050 2.67079 0.45630 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 36 1.15471 1.36852 2.09475 1.18004 37 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 37 2.67719 2.62976 3.19724 0.20056 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 38 0.38607 2.43753 2.14995 2.15066 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 39 1.46525 2.74036 0.49748 2.33956 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 40 2.29401 2.39893 2.87847 0.28488 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 41 0.36647 2.45220 2.24851 2.16138 42 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 42 2.50336 2.38369 3.01833 0.25219 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 43 2.19749 3.24590 0.23362 2.84172 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 44 2.77353 3.66124 0.13633 3.23651 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 45 2.26692 2.78940 0.27280 2.60824 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 46 2.93307 0.18473 3.50938 2.45896 47 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 47 0.19519 3.01138 2.76824 2.72842 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 48 0.20726 3.03686 2.59256 2.74297 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 49 2.77353 3.66124 0.13633 3.23651 50 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 50 2.53705 0.25642 3.20137 2.24078 51 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 51 0.14341 3.31079 3.02790 3.02206 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 52 1.74889 2.64878 0.41684 2.34165 53 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 53 1.59035 2.81861 0.43474 2.41881 54 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 54 2.54336 3.50164 0.16769 3.08718 55 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 55 0.24841 2.91267 2.38636 2.60825 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 56 1.65697 2.86218 0.40506 2.46269 57 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 57 2.10694 0.52624 2.73065 1.50331 58 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 58 2.67719 2.62976 3.19724 0.20056 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 59 0.84497 2.47820 1.01824 2.07699 60 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 60 2.57331 3.52343 0.16308 3.10780 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 61 0.23478 2.95031 2.45059 2.64946 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 62 0.57154 1.99320 1.95971 1.84398 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 63 0.83464 1.31840 2.19030 1.67920 64 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 64 1.67399 2.87350 0.39785 2.47406 65 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 65 0.23653 2.87879 2.62139 2.50427 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 66 2.49386 2.36927 3.00862 0.25554 67 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 67 2.18184 2.23191 2.76062 0.33325 68 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 68 1.86986 1.06854 2.45077 0.87679 69 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 69 2.15697 3.02824 0.28070 2.51744 70 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 70 2.31226 0.31103 3.04385 2.11513 71 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 71 0.39876 2.50356 2.12659 2.05722 72 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 72 1.48170 1.17003 1.53926 1.39492 73 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 73 2.03309 2.10016 2.27877 0.43971 74 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 74 1.97362 1.78462 2.54979 0.48599 75 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 75 0.38538 2.57104 2.04243 2.17476 76 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 76 0.14341 3.31079 3.02790 3.02206 77 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 77 2.48620 0.69686 2.20425 1.17671 78 c - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 78 2.83547 0.34921 2.54508 1.84771 79 C - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 79 2.89683 0.33683 2.56004 1.87423 80 C - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 80 2.02026 1.39986 1.84829 0.76951 81 u - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 81 1.72885 2.54276 0.44432 2.27690 82 G - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 82 2.18704 2.68059 0.29547 2.58961 83 G - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 83 2.28843 0.62750 2.04027 1.44963 84 C - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 84 2.67706 0.42146 2.37390 1.70359 85 C - - > 1.38629 1.38629 1.38629 1.38629 0.01815 4.01791 * 1.46634 0.26236 0.00000 * //