INFERNAL1/a [1.1.5 | Sep 2023] NAME HIV_GSL3 ACC RF00376 DESC HIV gag stem loop 3 (GSL3) STATES 256 NODES 78 CLEN 84 W 101 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 5 05:17:24 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00376/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 72 EFFN 2.122559 CKSUM 3389361131 NULL 0.000 0.000 0.000 0.000 GA 42.00 TC 42.40 NC 41.20 EFP7GF -8.2371 0.71862 ECMLC 0.61125 -5.93078 3.28396 1600000 335233 0.003580 ECMGC 0.41850 -16.50178 -3.68691 1600000 85352 0.004686 ECMLI 0.58858 -3.93624 5.15332 1600000 252717 0.004748 ECMGI 0.46367 -10.36636 0.54984 1600000 63131 0.006336 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 101 122 -9.137 -9.077 -0.021 -7.853 -8.133 -8.528 IL 1 1 2 1 6 1 33 103 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 34 103 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 85 G C - - MP 3 2 3 7 6 3 38 101 122 -9.137 -9.077 -0.021 -7.853 -8.133 -8.528 -3.589 -1.536 -3.586 0.881 -4.088 -2.867 0.230 -4.082 -3.698 3.262 -4.053 -0.085 -0.032 -3.439 -1.658 -2.627 ML 4 2 3 7 6 1 31 100 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 31 100 120 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 25 97 118 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 33 101 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 33 101 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 84 g c - - MP 9 8 6 13 6 2 37 99 120 -9.137 -9.077 -0.021 -7.853 -8.133 -8.528 -3.000 -1.757 -3.035 1.182 -3.401 -2.604 0.645 -3.495 -2.642 2.949 -3.621 0.241 0.405 -3.002 -1.150 -2.122 ML 10 8 6 13 6 1 30 98 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 30 98 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 25 95 116 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 32 99 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 33 99 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 83 C G - - MP 15 14 6 19 6 2 36 97 118 -9.137 -9.077 -0.021 -7.853 -8.133 -8.528 -3.466 -3.561 -3.542 -0.251 -1.465 -2.549 3.440 -3.616 -3.602 -0.172 -4.065 -1.896 0.475 -3.740 -0.974 -2.657 ML 16 14 6 19 6 1 30 96 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 29 96 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 24 93 114 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 32 97 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 32 97 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 82 C G - - MP 21 20 6 25 6 2 34 95 116 -9.137 -9.077 -0.024 -7.853 -7.374 -8.528 -3.405 -3.452 -3.421 0.065 -0.386 -4.108 3.189 -2.367 -3.449 0.185 -3.901 -1.630 0.945 -3.637 -0.461 -2.425 ML 22 20 6 25 6 1 29 94 114 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 29 94 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 24 91 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 31 95 116 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 31 95 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 81 a u - - MP 27 26 6 31 6 2 33 93 114 -9.134 -9.073 -0.021 -7.850 -8.129 -8.524 -2.003 -1.706 -2.774 2.458 -2.933 -3.635 0.883 -3.094 -2.860 1.825 -3.367 0.335 0.704 -2.905 -0.851 -1.870 ML 28 26 6 31 6 1 28 92 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 28 92 112 -7.029 -5.758 -1.543 -5.736 -0.870 -3.950 0.504 -0.479 -0.198 -0.010 D 30 26 6 31 6 0 23 89 110 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 30 93 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 30 93 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 80 G C - - MP 33 32 6 37 6 2 31 91 112 -9.137 -9.077 -0.021 -7.853 -8.133 -8.528 -4.034 -2.307 -4.042 0.671 -4.605 -4.354 -0.084 -4.482 -3.988 3.435 -3.267 -0.301 -0.370 -3.846 -2.051 -3.011 ML 34 32 6 37 6 1 27 90 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 27 90 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 23 88 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 29 91 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 29 91 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 7 79 G C - - MP 39 38 6 43 6 2 29 89 110 -9.137 -9.077 -0.021 -7.853 -8.133 -8.528 -3.938 -1.937 -3.929 0.698 -4.473 -3.342 -0.002 -4.427 -3.952 3.402 -4.278 -0.286 -0.282 -3.695 -1.946 -2.943 ML 40 38 6 43 6 1 26 88 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 25 88 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 23 86 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 27 89 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 27 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 8 78 g c - - MP 45 44 6 49 4 2 27 87 108 -7.025 -7.232 -0.050 -5.646 -3.290 -0.875 -3.314 1.345 -3.848 -4.020 0.427 -3.735 -3.428 2.842 -3.830 1.022 0.171 -3.326 -1.448 -2.305 ML 46 44 6 49 4 1 25 87 108 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 4 1 24 87 108 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 48 44 6 49 4 0 22 86 107 -4.568 -4.250 -2.265 -0.520 IL 49 49 5 49 4 1 26 89 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 50 50 6 50 3 1 26 88 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 51 50 6 53 3 1 25 85 106 -8.036 -0.027 -6.068 -0.636 -1.880 1.397 -1.146 D 52 50 6 53 3 0 22 84 104 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 25 87 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 54 53 3 56 3 1 24 84 104 -8.028 -0.179 -3.147 -0.706 -1.668 1.412 -1.283 D 55 53 3 56 3 0 21 83 103 -6.245 -1.758 -0.533 IL 56 56 3 56 3 1 25 86 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 57 56 3 59 3 1 24 83 103 -7.871 -0.022 -6.525 1.281 -1.213 -0.960 -0.681 D 58 56 3 59 3 0 20 82 102 -7.208 -0.592 -1.600 IL 59 59 3 59 3 1 24 85 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 60 59 3 62 3 1 23 82 102 -8.036 -0.020 -6.690 1.748 -2.517 -2.134 -2.074 D 61 59 3 62 3 0 18 80 101 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 23 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 63 62 3 65 3 1 23 81 101 -3.218 -0.180 -6.690 1.509 -1.588 -1.314 -1.252 D 64 62 3 65 3 0 17 79 99 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 22 82 102 -1.767 -0.597 -4.467 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - G - - - ML 66 65 3 68 3 1 22 80 100 -8.036 -0.020 -6.690 -0.168 -1.071 1.011 -0.694 D 67 65 3 68 3 0 16 78 98 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 21 81 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - A - - - ML 69 68 3 71 3 1 21 79 99 -8.036 -0.020 -6.690 1.692 -2.300 -1.787 -1.857 D 70 68 3 71 3 0 16 77 97 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 20 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - A - - - ML 72 71 3 74 3 1 20 78 98 -8.036 -0.020 -6.690 1.604 -1.911 -1.531 -1.525 D 73 71 3 74 3 0 15 76 96 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 19 79 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - A - - - ML 75 74 3 77 3 1 19 77 97 -8.036 -0.020 -6.690 1.338 -1.343 -0.819 -0.967 D 76 74 3 77 3 0 14 75 95 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 19 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - A - - - ML 78 77 3 80 3 1 19 75 96 -8.036 -0.029 -5.944 1.040 -0.503 -1.137 -0.352 D 79 77 3 80 3 0 13 74 94 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 18 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - A - - - ML 81 80 3 83 3 1 18 74 95 -8.027 -0.041 -5.371 1.054 -1.259 -0.253 -0.584 D 82 80 3 83 3 0 13 73 93 -6.263 -1.776 -0.525 IL 83 83 3 83 3 1 17 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - a - - - ML 84 83 3 86 3 1 17 73 94 -8.006 -0.020 -6.660 0.807 -0.586 -0.492 -0.195 D 85 83 3 86 3 0 12 72 92 -6.441 -1.228 -0.832 IL 86 86 3 86 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - U - - - ML 87 86 3 89 3 1 17 72 92 -8.036 -0.020 -6.690 -1.620 -1.593 -2.360 1.655 D 88 86 3 89 3 0 11 71 91 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 16 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - A - - - ML 90 89 3 92 3 1 16 71 91 -8.036 -0.020 -6.690 1.630 -2.023 -1.808 -1.420 D 91 89 3 92 3 0 10 70 90 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 15 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - U - - - ML 93 92 3 95 3 1 15 70 90 -8.036 -0.020 -6.690 -1.139 -0.826 -1.876 1.438 D 94 92 3 95 3 0 9 69 89 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 14 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - A - - - ML 96 95 3 98 3 1 14 69 89 -8.036 -0.020 -6.690 1.275 -0.869 -1.146 -0.782 D 97 95 3 98 3 0 8 68 88 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 13 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - a - - - ML 99 98 3 101 3 1 14 68 88 -8.036 -0.020 -6.690 0.409 -0.878 0.172 0.002 D 100 98 3 101 3 0 8 67 87 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 12 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - a - - - ML 102 101 3 104 3 1 13 67 87 -8.036 -0.020 -6.690 0.801 -1.135 0.167 -0.557 D 103 101 3 104 3 0 7 66 86 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 12 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - u - - - ML 105 104 3 107 3 1 12 66 86 -8.036 -0.020 -6.690 0.062 0.226 -1.124 0.409 D 106 104 3 107 3 0 6 65 85 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 11 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - U - - - ML 108 107 3 110 3 1 11 65 85 -8.036 -0.020 -6.690 -1.620 -1.593 -2.360 1.655 D 109 107 3 110 3 0 5 64 84 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 10 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - A - - - ML 111 110 3 113 3 1 11 64 84 -8.036 -0.020 -6.690 1.071 -1.474 0.013 -0.914 D 112 110 3 113 3 0 5 63 83 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 9 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - A - - - ML 114 113 3 116 3 1 10 63 83 -8.036 -0.020 -6.690 1.684 -2.222 -1.940 -1.686 D 115 113 3 116 3 0 4 62 82 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - A - - - ML 117 116 3 119 3 1 9 62 82 -8.036 -0.020 -6.690 1.748 -2.517 -2.134 -2.074 D 118 116 3 119 3 0 3 60 81 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - A - - - ML 120 119 3 122 3 1 9 61 81 -8.036 -0.020 -6.690 1.305 -1.405 -0.642 -0.970 D 121 119 3 122 3 0 2 59 79 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - C - - - ML 123 122 3 125 3 1 8 60 80 -8.036 -0.020 -6.690 -1.917 1.668 -2.745 -1.295 D 124 122 3 125 3 0 2 58 78 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 7 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - A - - - ML 126 125 3 128 3 1 7 59 79 -8.036 -0.020 -6.690 1.608 -1.953 -1.761 -1.325 D 127 125 3 128 3 0 1 57 77 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - U - - - ML 129 128 3 131 3 1 7 58 78 -8.036 -0.020 -6.690 -0.963 -0.432 -1.707 1.287 D 130 128 3 131 3 0 0 56 76 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - a - - - ML 132 131 3 134 3 1 6 57 77 -8.036 -0.020 -6.690 0.323 0.004 -0.974 0.307 D 133 131 3 134 3 0 0 55 75 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - U - - - ML 135 134 3 137 3 1 5 56 75 -8.036 -0.020 -6.690 -1.620 -1.593 -2.360 1.655 D 136 134 3 137 3 0 0 54 74 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - A - - - ML 138 137 3 140 3 1 5 55 74 -8.036 -0.020 -6.690 1.396 -1.424 -1.029 -0.983 D 139 137 3 140 3 0 0 53 73 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - G - - - ML 141 140 3 143 3 1 4 54 73 -8.036 -0.020 -6.690 -0.078 -1.805 1.224 -1.217 D 142 140 3 143 3 0 0 52 72 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - U - - - ML 144 143 3 146 3 1 4 53 72 -8.036 -0.020 -6.690 -1.148 -1.311 -1.966 1.531 D 145 143 3 146 3 0 0 51 71 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 2 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - A - - - ML 147 146 3 149 3 1 3 51 71 -8.036 -0.020 -6.690 1.425 -1.448 -1.157 -1.001 D 148 146 3 149 3 0 0 50 70 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 2 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - U - - - ML 150 149 3 152 3 1 3 50 70 -8.036 -0.020 -6.690 -1.411 -1.295 -2.148 1.581 D 151 149 3 152 3 0 0 49 69 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - G - - - ML 153 152 3 155 3 1 2 49 69 -8.036 -0.020 -6.690 -1.015 -2.453 1.607 -1.860 D 154 152 3 155 3 0 0 48 68 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - G - - - ML 156 155 3 158 3 1 2 48 68 -8.036 -0.020 -6.690 -1.733 -2.977 1.756 -2.364 D 157 155 3 158 3 0 0 47 67 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - G - - - ML 159 158 3 161 3 1 2 47 67 -8.036 -0.020 -6.690 -1.086 -1.880 1.544 -1.549 D 160 158 3 161 3 0 0 46 66 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - C - - - ML 162 161 3 164 3 1 1 46 66 -8.036 -0.020 -6.690 -1.917 1.668 -2.745 -1.295 D 163 161 3 164 3 0 0 45 64 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - A - - - ML 165 164 3 167 3 1 1 45 65 -8.036 -0.020 -6.690 1.672 -2.153 -1.817 -1.716 D 166 164 3 167 3 0 0 44 63 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - A - - - ML 168 167 3 170 3 1 1 44 64 -8.036 -0.020 -6.690 1.654 -2.180 -1.598 -1.729 D 169 167 3 170 3 0 0 43 62 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - G - - - ML 171 170 3 173 3 1 1 43 62 -8.036 -0.020 -6.690 -1.733 -2.977 1.756 -2.364 D 172 170 3 173 3 0 0 42 61 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - C - - - ML 174 173 3 176 3 1 1 42 61 -8.036 -0.020 -6.690 -1.429 1.557 -2.358 -1.025 D 175 173 3 176 3 0 0 41 60 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - A - - - ML 177 176 3 179 3 1 1 41 60 -8.036 -0.020 -6.690 1.748 -2.517 -2.134 -2.074 D 178 176 3 179 3 0 0 40 59 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - G - - - ML 180 179 3 182 3 1 1 40 59 -8.036 -0.020 -6.690 -0.440 -1.701 1.337 -1.224 D 181 179 3 182 3 0 0 38 58 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 54 - G - - - ML 183 182 3 185 3 1 1 39 58 -8.036 -0.020 -6.690 -0.235 -1.903 1.311 -1.315 D 184 182 3 185 3 0 0 37 57 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 55 - G - - - ML 186 185 3 188 3 1 1 38 57 -8.036 -0.020 -6.690 -1.451 -2.777 1.708 -2.174 D 187 185 3 188 3 0 0 36 56 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 56 - A - - - ML 189 188 3 191 3 1 1 37 56 -8.036 -0.020 -6.690 1.593 -2.020 -1.333 -1.556 D 190 188 3 191 3 0 0 35 55 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 57 - G - - - ML 192 191 3 194 3 1 1 36 55 -8.036 -0.020 -6.690 -0.323 -1.961 1.355 -1.373 D 193 191 3 194 3 0 0 34 54 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 58 - C - - - ML 195 194 3 197 3 1 1 34 54 -8.036 -0.020 -6.690 -0.906 1.170 -1.781 -0.111 D 196 194 3 197 3 0 0 33 53 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 59 - U - - - ML 198 197 3 200 3 1 1 33 53 -8.036 -0.020 -6.690 -1.620 -1.593 -2.360 1.655 D 199 197 3 200 3 0 0 32 51 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 60 - a - - - ML 201 200 3 203 3 1 1 32 51 -8.036 -0.020 -6.690 0.747 -1.456 0.496 -0.871 D 202 200 3 203 3 0 0 31 50 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 61 - G - - - ML 204 203 3 206 3 1 1 31 50 -8.036 -0.020 -6.690 -1.488 -2.804 1.715 -2.201 D 205 203 3 206 3 0 0 30 49 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 62 - A - - - ML 207 206 3 209 3 1 1 30 49 -8.036 -0.020 -6.690 1.614 -2.070 -1.418 -1.611 D 208 206 3 209 3 0 0 29 48 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 63 - A - - - ML 210 209 3 212 3 1 1 29 48 -8.036 -0.020 -6.690 1.129 -0.838 -0.776 -0.578 D 211 209 3 212 3 0 0 28 47 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 64 - a - - - ML 213 212 3 215 3 1 1 28 47 -8.036 -0.020 -6.690 0.766 0.062 -1.080 -0.354 D 214 212 3 215 3 0 0 27 46 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 65 - G - - - ML 216 215 3 218 3 1 1 27 46 -8.036 -0.020 -6.690 -0.352 -1.980 1.369 -1.393 D 217 215 3 218 3 0 0 26 45 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 66 - A - - - ML 219 218 3 221 3 1 1 26 45 -8.036 -0.020 -6.690 1.612 -1.986 -1.632 -1.441 D 220 218 3 221 3 0 0 25 44 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 67 - U - - - ML 222 221 3 224 3 1 1 25 43 -8.036 -0.020 -6.690 -1.399 -1.277 -2.136 1.576 D 223 221 3 224 3 0 0 24 43 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 68 - U - - - ML 225 224 3 227 3 1 1 23 42 -8.036 -0.020 -6.690 -1.009 -1.104 -1.822 1.462 D 226 224 3 227 3 0 0 22 41 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 69 - u - - - ML 228 227 3 230 3 1 1 22 41 -8.036 -0.020 -6.690 -0.613 0.417 -1.433 0.714 D 229 227 3 230 3 0 0 21 40 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 70 - G - - - ML 231 230 3 233 3 1 1 21 40 -8.036 -0.020 -6.690 -0.967 -2.181 1.539 -1.462 D 232 230 3 233 3 0 0 20 39 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 71 - C - - - ML 234 233 3 236 3 1 1 20 39 -8.036 -0.020 -6.690 -1.145 1.473 -2.153 -0.868 D 235 233 3 236 3 0 0 19 38 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 72 - A - - - ML 237 236 3 239 3 1 1 19 37 -8.036 -0.020 -6.690 1.378 -1.503 -1.001 -0.867 D 238 236 3 239 3 0 0 18 37 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 73 - c - - - ML 240 239 3 242 3 1 1 17 36 -8.036 -0.020 -6.690 -0.108 0.278 -0.235 0.015 D 241 239 3 242 3 0 0 17 36 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 74 - U - - - ML 243 242 3 245 3 1 1 16 35 -8.036 -0.020 -6.690 -0.802 -0.930 -1.198 1.302 D 244 242 3 245 3 0 0 16 34 -6.174 -1.687 -0.566 IL 245 245 3 245 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 74 ] 75 - U - - - ML 246 245 3 248 3 1 1 15 33 -8.036 -0.020 -6.690 -0.750 -0.531 -1.560 1.247 D 247 245 3 248 3 0 0 15 33 -6.174 -1.687 -0.566 IL 248 248 3 248 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 75 ] 76 - A - - - ML 249 248 3 251 3 1 1 13 31 -8.036 -0.020 -6.690 1.397 -1.589 -0.892 -1.015 D 250 248 3 251 3 0 0 13 32 -6.174 -1.687 -0.566 IL 251 251 3 251 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 76 ] 77 - A - - - ML 252 251 3 254 2 1 1 1 1 * 0.000 1.748 -2.517 -2.134 -2.074 D 253 251 3 254 2 0 0 0 0 * 0.000 IL 254 254 3 254 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 77 ] - - - - - - E 255 254 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME HIV_GSL3 ACC RF00376 DESC HIV gag stem loop 3 (GSL3) LENG 84 MAXL 172 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 5 05:17:24 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00376/CM NSEQ 72 EFFN 2.491699 CKSUM 3389361131 STATS LOCAL MSV -8.8105 0.71862 STATS LOCAL VITERBI -9.6332 0.71862 STATS LOCAL FORWARD -3.2870 0.71862 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.10384 1.67758 1.33546 1.52078 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 0.00000 * 1 1.94150 2.49166 0.37869 2.41929 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 2 1.74501 2.17618 0.53453 2.07195 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 3 2.77114 0.29554 2.63055 2.10995 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 4 2.55106 0.42125 2.37000 1.75857 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04295 4.03574 3.71460 1.46634 0.26236 1.09861 0.40547 5 0.90494 2.04304 1.17417 1.85326 5 a - - < 1.38629 1.38629 1.38629 1.38629 0.03623 4.02903 4.02903 1.46634 0.26236 0.89635 0.52435 6 2.16154 2.79354 0.28202 2.66806 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 7 2.09804 2.67832 0.30917 2.59599 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 8 1.57540 2.39947 0.51682 2.24529 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 9 1.89582 2.79076 0.37832 2.26898 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04221 4.03574 3.74383 1.46634 0.26236 1.09861 0.40547 10 1.95661 2.61812 0.36527 2.38906 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.16732 4.02973 1.99296 1.46634 0.26236 1.20567 0.35595 11 0.46760 2.27441 2.09579 1.91280 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04117 3.90359 3.90359 1.46634 0.26236 0.22302 1.60992 12 0.14341 3.31079 3.02791 3.02206 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 13 0.30825 2.56005 2.36799 2.36130 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.16761 1.99035 4.03574 0.24119 1.54033 1.09861 0.40547 14 1.54266 2.16793 0.63956 1.93621 15 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 15 0.18144 3.13380 2.74438 2.84567 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 16 0.24230 2.81450 2.53692 2.57524 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 17 0.42737 2.37482 1.98601 2.14129 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 18 0.63427 1.74201 2.23575 1.67345 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04382 4.03574 3.68092 1.46634 0.26236 1.09861 0.40547 19 0.63010 2.31671 1.56119 1.83900 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05358 4.02819 3.37071 1.46634 0.26236 1.23137 0.34516 20 0.80703 1.80240 1.73889 1.54554 21 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03688 4.01149 4.01149 1.46634 0.26236 0.61462 0.77837 21 2.67720 2.62976 3.19724 0.20056 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 22 0.22353 2.91246 2.76445 2.48941 23 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 23 2.28793 2.01261 2.80214 0.35069 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 24 0.46810 2.01355 2.24576 2.00658 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 25 1.10017 2.02577 1.24657 1.39512 26 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 26 0.81371 2.21955 1.25107 1.82059 27 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 27 1.35139 1.20450 2.21037 1.10377 28 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 28 2.67720 2.62976 3.19724 0.20056 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 29 0.61498 2.49358 1.36425 2.11064 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 30 0.18658 3.06988 2.86986 2.70190 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 31 0.14341 3.31079 3.02791 3.02206 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 32 0.45060 2.42614 1.84995 2.14444 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 33 2.93307 0.18473 3.50938 2.45896 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 34 0.23861 2.85746 2.72700 2.41412 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 35 2.14953 1.70767 2.66972 0.45744 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 36 1.15737 1.36762 2.09467 1.17809 37 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 37 2.67720 2.62976 3.19724 0.20056 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 38 0.38798 2.43353 2.14595 2.14650 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 39 1.46769 2.74184 0.49616 2.34106 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 40 2.29211 2.39790 2.87704 0.28537 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 41 0.36749 2.45070 2.24574 2.15892 42 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 42 2.50223 2.38198 3.01717 0.25258 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 43 2.19352 3.24296 0.23454 2.83887 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 44 2.77353 3.66124 0.13633 3.23652 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 45 2.26447 2.78486 0.27381 2.60499 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 46 2.93307 0.18473 3.50938 2.45896 47 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 47 0.19567 3.00900 2.76631 2.72602 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 48 0.20727 3.03683 2.59252 2.74294 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 49 2.77353 3.66124 0.13633 3.23652 50 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 50 2.53478 0.25691 3.19973 2.23950 51 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 51 0.14341 3.31079 3.02791 3.02206 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 52 1.74538 2.64480 0.41871 2.33817 53 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 53 1.58781 2.81697 0.43592 2.41716 54 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 54 2.54149 3.50028 0.16798 3.08589 55 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 55 0.24927 2.91040 2.38242 2.60575 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 56 1.65564 2.86130 0.40563 2.46181 57 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 57 2.10499 0.52746 2.72897 1.50165 58 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 58 2.67720 2.62976 3.19724 0.20056 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 59 0.84854 2.47870 1.01377 2.07735 60 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 60 2.57165 3.52223 0.16333 3.10667 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 61 0.23506 2.94950 2.44924 2.64859 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 62 0.57350 1.98973 1.95734 1.84209 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 63 0.83115 1.32343 2.18991 1.68038 64 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 64 1.67814 2.87626 0.39612 2.47684 65 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 65 0.23663 2.87863 2.62038 2.50437 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 66 2.49269 2.36749 3.00743 0.25595 67 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 67 2.18209 2.23112 2.76055 0.33334 68 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 68 1.86915 1.06724 2.45042 0.87820 69 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 69 2.15496 3.02545 0.28156 2.51395 70 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 70 2.30902 0.31190 3.04163 2.11335 71 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 71 0.39982 2.50140 2.12551 2.05405 72 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 72 1.48463 1.16723 1.53867 1.39626 73 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 73 2.03121 2.09860 2.27523 0.44095 74 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 74 1.97999 1.78316 2.55340 0.48450 75 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 75 0.38638 2.56908 2.04065 2.17212 76 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 76 0.14341 3.31079 3.02791 3.02206 77 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 77 2.48834 0.69409 2.20627 1.17989 78 c - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 78 2.83272 0.35040 2.54202 1.84495 79 C - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 79 2.89693 0.33709 2.55988 1.87310 80 C - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 80 2.01866 1.39835 1.84621 0.77148 81 u - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 81 1.72564 2.53947 0.44624 2.27299 82 G - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 82 2.18100 2.67358 0.29769 2.58310 83 G - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 83 2.28537 0.62930 2.03768 1.44830 84 C - - > 1.38629 1.38629 1.38629 1.38629 0.03598 4.03574 4.03574 1.46634 0.26236 1.09861 0.40547 84 2.67491 0.42237 2.37187 1.70216 85 C - - > 1.38629 1.38629 1.38629 1.38629 0.01815 4.01791 * 1.46634 0.26236 0.00000 * //