INFERNAL1/a [1.1.5 | Sep 2023] NAME HIV_PBS ACC RF00375 DESC HIV primer binding site (PBS) STATES 311 NODES 77 CLEN 99 W 130 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 23 15:14:57 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/3DNew/RF00375/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 132 EFFN 0.825806 CKSUM 2471111308 NULL 0.000 0.000 0.000 0.000 GA 61.00 TC 61.20 NC 60.10 EFP7GF -5.7785 0.71857 ECMLC 0.68347 -6.31727 1.53009 1600000 256148 0.004685 ECMGC 0.40710 -13.35333 -3.37201 1600000 23269 0.017190 ECMLI 0.60426 -4.25194 4.06339 1600000 182538 0.006574 ECMGI 0.46830 -7.08301 1.58715 1600000 23196 0.017244 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 0 1 130 174 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 IL 1 1 2 1 6 20 50 132 176 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 20 50 132 175 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 3 103 C G - - MP 3 2 3 7 6 23 54 131 174 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.389 -3.261 -3.353 0.308 -2.369 -3.986 3.110 -3.201 -3.394 0.701 -3.110 -1.304 1.088 -3.563 -0.305 -2.320 ML 4 2 3 7 6 18 48 129 172 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 18 47 128 172 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 15 43 125 169 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 19 49 130 174 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 20 50 130 173 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 4 102 u a - - MP 9 8 6 13 6 23 53 129 172 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.239 -3.131 -3.189 0.470 -1.958 -3.823 1.921 -2.994 -3.222 0.841 -3.645 -1.165 2.666 -3.405 -0.070 -2.125 ML 10 8 6 13 6 18 47 127 170 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 18 47 126 170 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 15 42 123 167 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 19 49 128 172 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 19 49 128 171 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 5 101 C G - - MP 15 14 6 19 6 22 51 127 170 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.449 -3.275 -3.360 0.341 -2.464 -3.948 3.047 -3.131 -3.397 0.772 -3.342 -1.265 1.177 -3.593 -0.075 -2.296 ML 16 14 6 19 6 18 47 125 168 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 18 46 125 168 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 14 42 121 165 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 19 48 126 170 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 19 48 126 169 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 6 100 u a - - MP 21 20 6 25 6 22 50 125 168 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.290 -3.127 -3.216 0.493 -2.357 -3.833 1.936 -3.000 -3.250 0.915 -3.659 -1.114 2.605 -3.442 0.159 -2.142 ML 22 20 6 25 6 18 46 123 166 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 17 45 123 166 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 14 41 119 163 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 19 47 124 168 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 19 47 124 167 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 7 99 G C - - MP 27 26 6 31 6 21 48 123 166 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.469 -2.257 -3.517 0.932 -3.656 -4.017 0.693 -3.790 -3.476 3.156 -3.888 -0.285 0.353 -3.180 -1.269 -2.487 ML 28 26 6 31 6 17 45 121 165 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 17 44 121 164 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 14 41 118 161 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 18 46 122 166 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 18 46 122 165 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 8 98 G C - - MP 33 32 6 37 6 19 46 121 164 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.802 -2.657 -3.858 0.788 -3.910 -4.284 0.514 -3.997 -3.646 3.292 -4.058 -0.342 0.091 -3.835 -1.483 -2.749 ML 34 32 6 37 6 17 44 119 163 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 16 43 119 162 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 14 41 117 160 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 17 45 120 164 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 17 45 120 163 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 9 97 u a - - MP 39 38 6 43 4 18 44 119 162 -6.405 -6.612 -0.078 -5.026 -3.291 -3.125 -3.214 0.497 -2.349 -3.829 1.957 -2.994 -3.249 0.923 -3.655 -1.108 2.594 -3.442 0.120 -2.139 ML 40 38 6 43 4 16 43 118 161 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 4 15 42 117 161 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 42 38 6 43 4 13 40 116 160 -4.568 -4.250 -2.265 -0.520 IL 43 43 5 43 4 17 44 119 162 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 44 44 6 44 3 16 43 118 162 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 10 - A - - - ML 45 44 6 47 3 16 42 117 160 -7.468 -0.029 -6.122 1.395 -1.417 -1.141 -0.882 D 46 44 6 47 3 13 40 115 158 -6.174 -1.687 -0.566 IL 47 47 3 47 3 16 43 117 161 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 11 - a - - - ML 48 47 3 50 3 15 41 116 159 -7.897 -0.026 -6.215 0.821 -0.922 -0.168 -0.295 D 49 47 3 50 3 13 39 114 158 -5.620 -0.734 -1.403 IL 50 50 3 50 3 15 41 116 160 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 96 - a - - MR 51 50 3 53 3 14 40 115 158 -7.897 -0.026 -6.215 0.973 -1.047 -0.261 -0.477 D 52 50 3 53 3 12 38 113 156 -6.390 -1.568 -0.620 IR 53 53 3 53 3 14 41 115 159 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 95 - a - - MR 54 53 3 56 3 13 40 114 157 -7.897 -0.029 -6.006 0.802 -0.967 -0.046 -0.366 D 55 53 3 56 3 11 38 112 156 -6.390 -1.568 -0.620 IR 56 56 3 56 3 13 40 114 158 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 94 - a - - MR 57 56 3 59 2 12 39 113 156 -7.733 -0.007 0.722 -0.973 0.097 -0.373 D 58 56 3 59 2 11 38 112 155 -4.451 -0.068 IR 59 59 3 59 2 12 39 113 157 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 13 ] - - - - - - B 60 59 3 61 198 11 38 112 155 [ BEGL 14 ] - - - - - - S 61 60 1 62 4 0 6 61 80 -0.053 -6.585 -5.992 -6.632 [ MATP 15 ] 12 58 C G - - MP 62 61 1 66 6 2 9 61 80 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.656 -3.447 -3.482 0.215 -2.440 -4.004 3.124 -3.149 -3.515 0.658 -3.857 -1.381 1.144 -3.773 -0.138 -2.390 ML 63 61 1 66 6 1 3 59 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 64 61 1 66 6 1 3 59 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 65 61 1 66 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 66 66 5 66 6 1 5 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 67 67 6 67 5 1 5 60 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 57 u a - - MP 68 67 6 72 6 2 8 59 78 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.374 -3.130 -3.290 0.502 -2.434 -3.918 1.868 -3.059 -3.308 0.954 -3.714 -1.039 2.685 -3.543 -0.130 -2.196 ML 69 67 6 72 6 1 3 57 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 70 67 6 72 6 1 3 57 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 71 67 6 72 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 72 72 5 72 6 1 4 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 73 73 6 73 5 1 4 58 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 56 a u - - MP 74 73 6 78 6 2 8 57 76 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.156 -2.369 -3.205 2.617 -3.216 -4.254 1.058 -3.268 -3.133 1.803 -3.644 0.027 0.625 -3.552 -0.894 -2.086 ML 75 73 6 78 6 1 3 55 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 76 73 6 78 6 1 3 55 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 77 73 6 78 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 78 78 5 78 6 1 4 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 79 79 6 79 5 1 4 56 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 55 G C - - MP 80 79 6 84 6 2 8 55 74 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.765 -2.546 -3.829 0.819 -3.950 -4.273 0.474 -4.001 -3.628 3.289 -4.045 -0.314 0.084 -3.799 -1.520 -2.726 ML 81 79 6 84 6 1 3 53 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 82 79 6 84 6 1 3 53 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 83 79 6 84 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 84 84 5 84 6 1 4 54 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 85 85 6 85 5 1 4 54 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 16 54 a u - - MP 86 85 6 90 6 2 7 53 72 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -2.762 -2.334 -3.095 2.576 -3.132 -4.118 1.098 -3.209 -3.066 1.768 -3.580 0.007 0.712 -3.387 -0.837 -2.013 ML 87 85 6 90 6 1 2 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 88 85 6 90 6 1 2 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 89 85 6 90 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 90 90 5 90 6 1 3 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 91 91 6 91 5 1 4 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 17 53 G C - - MP 92 91 6 96 6 2 6 51 70 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.764 -2.634 -3.821 0.846 -3.894 -4.275 0.528 -3.969 -3.622 3.272 -4.039 -0.317 0.116 -3.808 -1.468 -2.713 ML 93 91 6 96 6 1 2 49 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 94 91 6 96 6 1 2 49 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 95 91 6 96 6 0 0 47 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 96 96 5 96 6 1 3 50 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 97 97 6 97 5 1 3 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 52 a u - - MP 98 97 6 102 6 2 5 49 68 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.156 -2.369 -3.205 2.617 -3.216 -4.254 1.058 -3.268 -3.133 1.803 -3.644 0.027 0.625 -3.552 -0.894 -2.086 ML 99 97 6 102 6 1 2 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 100 97 6 102 6 1 2 47 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 101 97 6 102 6 0 0 45 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 102 102 5 102 6 1 3 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 103 103 6 103 5 1 3 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 19 51 u a - - MP 104 103 6 108 4 2 3 47 66 -6.374 -7.620 -0.115 -4.073 -2.615 -2.803 -3.035 0.744 -2.484 -3.786 1.747 -3.003 -3.064 1.174 -3.544 -0.799 2.556 -3.205 -0.197 -1.907 ML 105 103 6 108 4 1 1 46 66 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 106 103 6 108 4 1 1 46 65 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 107 103 6 108 4 0 0 44 63 -12.737 -14.007 -2.036 -0.404 IL 108 108 5 108 4 1 1 46 66 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 109 109 6 109 3 1 2 47 66 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 50 - A - - MR 110 109 6 112 3 1 3 45 64 -7.897 -0.026 -6.215 1.395 -1.417 -1.141 -0.882 D 111 109 6 112 3 0 0 43 63 -6.390 -1.568 -0.620 IR 112 112 3 112 3 1 2 46 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 49 - A - - MR 113 112 3 115 3 1 2 44 63 -7.897 -0.026 -6.215 1.395 -1.417 -1.141 -0.882 D 114 112 3 115 3 0 0 42 62 -6.390 -1.568 -0.620 IR 115 115 3 115 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 48 - A - - MR 116 115 3 118 5 1 2 43 62 -6.388 -0.056 -6.486 -6.698 -7.590 1.349 -1.301 -1.089 -0.793 D 117 115 3 118 5 0 0 41 61 -5.352 -0.707 -2.978 -4.409 -2.404 IR 118 118 3 118 5 1 1 43 63 -2.388 -0.500 -5.932 -4.100 -5.206 0.000 0.000 0.000 0.000 [ MATP 26 ] 20 45 C G - - MP 119 118 3 123 6 2 3 42 61 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.294 -3.260 -3.243 0.317 -1.186 -3.863 3.021 -3.048 -3.281 0.590 -3.692 -1.360 1.234 -3.473 -0.058 -2.212 ML 120 118 3 123 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 121 118 3 123 6 1 1 40 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 122 118 3 123 6 0 0 38 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 123 123 5 123 6 1 1 41 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 124 124 6 124 5 1 1 41 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 21 44 C G - - MP 125 124 6 129 4 2 2 40 59 -6.374 -7.620 -0.115 -4.073 -3.368 -3.326 -3.305 0.261 -1.254 -3.913 3.075 -3.096 -3.343 0.543 -3.746 -1.415 1.190 -3.540 -0.162 -2.269 ML 126 124 6 129 4 1 1 39 59 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 127 124 6 129 4 1 1 39 58 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 128 124 6 129 4 0 0 37 57 -12.737 -14.007 -2.036 -0.404 IL 129 129 5 129 4 1 1 39 59 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 130 130 6 130 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 43 - u - - MR 131 130 6 133 5 1 1 38 57 -6.671 -0.053 -6.486 -6.698 -7.590 -0.297 -0.564 -0.922 0.987 D 132 130 6 133 5 0 0 37 56 -5.352 -0.707 -2.978 -4.409 -2.404 IR 133 133 3 133 5 1 1 38 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 22 42 C G - - MP 134 133 3 138 4 2 2 37 56 -6.405 -6.612 -0.078 -5.026 -3.607 -3.481 -3.452 0.175 -2.177 -3.979 3.135 -3.138 -3.497 0.554 -3.846 -1.485 1.175 -3.721 -0.125 -2.375 ML 135 133 3 138 4 1 1 37 57 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 136 133 3 138 4 1 1 36 56 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 137 133 3 138 4 0 0 35 55 -4.568 -4.250 -2.265 -0.520 IL 138 138 5 138 4 1 1 38 58 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 139 139 6 139 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 23 - U - - - ML 140 139 6 142 3 1 1 34 53 -7.897 -0.026 -6.215 -0.639 -0.804 -1.309 1.252 D 141 139 6 142 3 0 0 33 52 -5.620 -0.734 -1.403 IL 142 142 3 142 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 41 - u - - MR 143 142 3 145 5 1 1 33 52 -6.671 -0.053 -6.486 -6.698 -7.590 -0.265 -0.533 -0.918 0.962 D 144 142 3 145 5 0 0 32 51 -5.352 -0.707 -2.978 -4.409 -2.404 IR 145 145 3 145 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 24 40 c g - - MP 146 145 3 150 4 2 2 32 51 -6.405 -6.612 -0.078 -5.026 -3.060 -2.977 -2.786 0.572 -2.137 -3.762 2.853 -2.590 -3.106 0.917 -3.557 -1.056 1.313 -3.260 0.042 -2.052 ML 147 145 3 150 4 1 1 32 52 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 148 145 3 150 4 1 1 32 51 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 149 145 3 150 4 0 0 31 50 -4.568 -4.250 -2.265 -0.520 IL 150 150 5 150 4 1 1 34 53 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 151 151 6 151 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 25 - A - - - ML 152 151 6 154 3 1 1 29 48 -7.897 -0.026 -6.215 1.395 -1.417 -1.141 -0.882 D 153 151 6 154 3 0 0 28 47 -5.620 -0.734 -1.403 IL 154 154 3 154 3 1 1 30 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 39 - a - - MR 155 154 3 157 5 1 1 28 47 -6.671 -0.053 -6.486 -6.698 -7.590 0.948 -0.689 -0.784 -0.201 D 156 154 3 157 5 0 0 27 46 -5.352 -0.707 -2.978 -4.409 -2.404 IR 157 157 3 157 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 26 38 G C - - MP 158 157 3 162 6 2 2 27 46 -8.924 -8.863 -0.025 -7.433 -7.919 -8.314 -3.362 -2.441 -3.413 1.030 -3.574 -4.000 0.771 -3.680 -3.390 3.043 -3.816 0.191 0.440 -3.160 -1.189 -2.373 ML 159 157 3 162 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 160 157 3 162 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 161 157 3 162 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 162 162 5 162 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 163 163 6 163 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 27 37 a u - - MP 164 163 6 168 6 2 2 25 44 -8.923 -8.862 -0.024 -7.638 -7.918 -8.313 -2.539 -2.062 -1.398 2.320 -2.667 -3.524 1.214 -2.897 -2.717 1.748 -3.239 -0.195 0.931 -2.798 -0.570 -1.728 ML 165 163 6 168 6 1 1 25 44 -6.263 -6.609 -1.291 -1.018 -6.459 -3.988 0.416 -0.419 -0.185 0.054 MR 166 163 6 168 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 167 163 6 168 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 168 168 5 168 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 169 169 6 169 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 28 36 c g - - MP 170 169 6 174 4 2 2 23 42 -6.405 -6.612 -0.078 -5.026 -3.174 -3.069 -3.145 0.494 -2.214 -3.408 2.885 -2.780 -3.182 0.871 -3.603 -1.134 1.304 -3.347 0.175 -2.110 ML 171 169 6 174 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 172 169 6 174 4 1 1 23 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 173 169 6 174 4 0 0 22 42 -4.568 -4.250 -2.265 -0.520 IL 174 174 5 174 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 175 175 6 175 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 29 - c - - - ML 176 175 6 178 3 1 1 20 39 -7.468 -0.029 -6.122 -0.156 0.688 -1.039 0.007 D 177 175 6 178 3 0 0 19 38 -6.174 -1.687 -0.566 IL 178 178 3 178 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 30 - c - - - ML 179 178 3 181 3 1 1 19 38 -7.468 -0.029 -6.122 0.009 0.351 -0.876 0.231 D 180 178 3 181 3 0 0 18 37 -6.174 -1.687 -0.566 IL 181 181 3 181 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 31 - u - - - ML 182 181 3 184 3 1 1 18 37 -7.468 -0.029 -6.122 -0.148 -0.172 -0.890 0.740 D 183 181 3 184 3 0 0 17 36 -6.174 -1.687 -0.566 IL 184 184 3 184 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 32 - U - - - ML 185 184 3 187 3 1 1 17 35 -7.468 -0.029 -6.122 -0.313 -0.574 -1.012 1.020 D 186 184 3 187 3 0 0 16 35 -6.174 -1.687 -0.566 IL 187 187 3 187 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 33 - u - - - ML 188 187 3 190 3 1 1 15 34 -7.468 -0.029 -6.122 -0.223 -0.510 -0.747 0.884 D 189 187 3 190 3 0 0 15 33 -6.174 -1.687 -0.566 IL 190 190 3 190 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 34 - u - - - ML 191 190 3 193 3 1 1 13 32 -7.468 -0.029 -6.122 -0.202 -0.590 -0.767 0.910 D 192 190 3 193 3 0 0 13 32 -6.174 -1.687 -0.566 IL 193 193 3 193 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 35 - a - - - ML 194 193 3 196 2 1 1 1 1 * 0.000 0.897 -0.799 -0.734 -0.055 D 195 193 3 196 2 0 0 0 0 * 0.000 IL 196 196 3 196 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 197 196 3 -1 0 0 0 0 0 [ BEGR 46 ] - - - - - - S 198 60 1 199 3 0 11 67 111 -7.468 -0.029 -6.122 IL 199 199 2 199 3 1 11 69 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 59 - C - - - ML 200 199 2 202 5 1 11 67 111 -6.671 -0.053 -6.486 -6.698 -7.590 -0.510 1.030 -1.299 -0.237 D 201 199 2 202 5 0 7 65 109 -4.959 -0.803 -4.221 -2.596 -2.508 IL 202 202 3 202 5 1 10 67 111 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 60 93 a u - - MP 203 202 3 207 4 2 10 66 110 -6.405 -6.612 -0.078 -5.026 -0.870 -1.912 -1.446 1.776 -2.078 -2.935 1.441 -2.403 -2.168 1.602 -2.714 -0.230 1.230 -2.224 -0.169 -1.283 ML 204 202 3 207 4 1 8 65 109 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 205 202 3 207 4 1 7 65 108 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 206 202 3 207 4 0 6 63 107 -4.568 -4.250 -2.265 -0.520 IL 207 207 5 207 4 1 9 66 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 208 208 6 208 3 1 9 66 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 61 - G - - - ML 209 208 6 211 3 1 9 64 107 -7.897 -0.026 -6.215 -0.558 -1.582 1.309 -0.973 D 210 208 6 211 3 0 5 62 106 -5.620 -0.734 -1.403 IL 211 211 3 211 3 1 8 64 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 50 ] - 92 - G - - MR 212 211 3 214 5 1 9 63 106 -6.671 -0.053 -6.486 -6.698 -7.590 -0.395 -1.476 1.222 -0.867 D 213 211 3 214 5 0 4 61 105 -5.352 -0.707 -2.978 -4.409 -2.404 IR 214 214 3 214 5 1 7 63 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 62 91 u a - - MP 215 214 3 219 6 2 9 62 106 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.374 -3.130 -3.290 0.502 -2.434 -3.918 1.868 -3.059 -3.308 0.954 -3.714 -1.039 2.685 -3.543 -0.130 -2.196 ML 216 214 3 219 6 1 6 61 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 217 214 3 219 6 1 5 60 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 218 214 3 219 6 0 3 58 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 219 219 5 219 6 1 6 61 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 220 220 6 220 5 1 6 61 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 63 90 g c - - MP 221 220 6 225 4 2 7 60 104 -6.405 -6.612 -0.078 -5.026 -2.629 -2.262 -2.730 1.079 -2.459 -3.542 1.514 -2.798 1.526 1.568 -3.179 -0.197 1.035 -2.968 -0.327 -1.754 ML 222 220 6 225 4 1 5 59 103 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 223 220 6 225 4 1 4 59 102 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 224 220 6 225 4 0 2 58 101 -4.568 -4.250 -2.265 -0.520 IL 225 225 5 225 4 1 6 60 104 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 226 226 6 226 3 1 6 60 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 64 - G - - - ML 227 226 6 229 3 1 6 58 101 -7.897 -0.026 -6.215 -0.412 -1.467 1.225 -0.865 D 228 226 6 229 3 0 2 57 100 -5.620 -0.734 -1.403 IL 229 229 3 229 3 1 5 58 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 54 ] - 89 - A - - MR 230 229 3 232 5 1 5 57 100 -6.671 -0.053 -6.486 -6.698 -7.590 1.395 -1.417 -1.141 -0.882 D 231 229 3 232 5 0 1 56 100 -5.352 -0.707 -2.978 -4.409 -2.404 IR 232 232 3 232 5 1 4 57 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 65 88 C G - - MP 233 232 3 237 6 2 4 56 99 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.589 -3.474 -3.443 0.178 -2.098 -3.977 3.133 -3.138 -3.487 0.547 -3.842 -1.487 1.176 -3.708 -0.130 -2.369 ML 234 232 3 237 6 1 2 57 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 235 232 3 237 6 1 2 57 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 236 232 3 237 6 0 0 56 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 237 237 5 237 6 1 3 56 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 238 238 6 238 5 1 3 56 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 66 87 G C - - MP 239 238 6 243 3 2 2 54 97 -4.346 -14.815 -0.073 -3.277 -2.394 -3.343 1.084 -3.508 -4.005 0.795 -3.590 -2.757 3.004 -3.752 0.184 0.471 -3.380 -1.151 -2.296 ML 240 238 6 243 3 1 1 57 101 -1.585 -1.585 -1.585 0.368 -0.385 -0.191 0.094 MR 241 238 6 243 3 1 1 57 101 -1.585 -1.585 -1.585 0.368 -0.385 -0.191 0.094 D 242 238 6 243 3 0 0 56 100 -1.585 -1.585 -1.585 IL 243 243 5 243 3 1 1 59 102 -0.610 -4.491 -1.736 0.000 0.000 0.000 0.000 IR 244 244 6 244 2 1 1 37 57 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 57 ] - - - - - - B 245 244 6 246 281 0 0 35 55 [ BEGL 58 ] - - - - - - S 246 245 1 247 4 0 0 25 44 -0.053 -6.585 -5.992 -6.632 [ MATP 59 ] 67 77 C G - - MP 247 246 1 251 6 2 2 25 44 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.656 -3.447 -3.482 0.215 -2.440 -4.004 3.124 -3.149 -3.515 0.658 -3.857 -1.381 1.144 -3.773 -0.138 -2.390 ML 248 246 1 251 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 249 246 1 251 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 250 246 1 251 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 251 251 5 251 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 252 252 6 252 5 1 1 25 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 68 76 C G - - MP 253 252 6 257 6 2 2 23 42 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.656 -3.447 -3.482 0.215 -2.440 -4.004 3.124 -3.149 -3.515 0.658 -3.857 -1.381 1.144 -3.773 -0.138 -2.390 ML 254 252 6 257 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 255 252 6 257 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 256 252 6 257 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 257 257 5 257 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 258 258 6 258 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 69 75 C G - - MP 259 258 6 263 4 2 2 21 40 -6.405 -6.612 -0.078 -5.026 -3.560 -3.451 -3.419 0.199 -2.087 -3.956 3.111 -3.118 -3.463 0.565 -3.821 -1.470 1.198 -3.680 -0.068 -2.347 ML 260 258 6 263 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 261 258 6 263 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 262 258 6 263 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 263 263 5 263 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 264 264 6 264 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 70 - G - - - ML 265 264 6 267 3 1 1 18 37 -7.468 -0.029 -6.122 -0.359 -1.452 1.200 -0.843 D 266 264 6 267 3 0 0 17 36 -6.174 -1.687 -0.566 IL 267 267 3 267 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 71 - A - - - ML 268 267 3 270 3 1 1 17 35 -7.468 -0.029 -6.122 1.355 -1.362 -1.031 -0.828 D 269 267 3 270 3 0 0 16 35 -6.174 -1.687 -0.566 IL 270 270 3 270 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 72 - A - - - ML 271 270 3 273 3 1 1 15 34 -7.468 -0.029 -6.122 1.229 -1.068 -0.937 -0.606 D 272 270 3 273 3 0 0 15 33 -6.174 -1.687 -0.566 IL 273 273 3 273 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 73 - c - - - ML 274 273 3 276 3 1 1 13 32 -7.468 -0.029 -6.122 -0.364 0.845 -0.967 -0.128 D 275 273 3 276 3 0 0 13 32 -6.174 -1.687 -0.566 IL 276 276 3 276 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 74 - A - - - ML 277 276 3 279 2 1 1 1 1 * 0.000 1.280 -1.220 -1.030 -0.615 D 278 276 3 279 2 0 0 0 0 * 0.000 IL 279 279 3 279 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 67 ] - - - - - - E 280 279 3 -1 0 0 0 0 0 [ BEGR 68 ] - - - - - - S 281 245 1 282 3 0 0 23 42 -7.468 -0.029 -6.122 IL 282 282 2 282 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 78 - A - - - ML 283 282 2 285 5 1 1 23 42 -6.671 -0.053 -6.486 -6.698 -7.590 1.257 -1.229 -0.844 -0.675 D 284 282 2 285 5 0 0 22 41 -4.959 -0.803 -4.221 -2.596 -2.508 IL 285 285 3 285 5 1 1 23 42 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 70 ] 79 86 C G - - MP 286 285 3 290 6 2 2 22 41 -8.924 -8.863 -0.024 -7.639 -7.919 -8.314 -3.440 -3.380 -3.355 0.230 -1.516 -3.944 3.101 -3.119 -3.395 0.534 -3.785 -1.446 1.182 -3.598 -0.162 -2.308 ML 287 285 3 290 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 288 285 3 290 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 289 285 3 290 6 0 0 20 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 290 290 5 290 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 291 291 6 291 5 1 1 22 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 71 ] 80 85 u a - - MP 292 291 6 296 4 2 2 20 39 -6.405 -6.612 -0.078 -5.026 -2.029 -2.218 -2.288 1.031 -0.673 -3.112 1.830 -2.457 -1.993 1.168 -2.875 -0.568 1.964 -2.434 0.059 -1.414 ML 293 291 6 296 4 1 1 21 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 294 291 6 296 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 295 291 6 296 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 296 296 5 296 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 297 297 6 297 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 81 - u - - - ML 298 297 6 300 3 1 1 17 35 -7.468 -0.029 -6.122 -0.186 -0.337 -0.761 0.798 D 299 297 6 300 3 0 0 16 35 -6.174 -1.687 -0.566 IL 300 300 3 300 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 82 - G - - - ML 301 300 3 303 3 1 1 15 34 -7.468 -0.029 -6.122 -0.395 -1.404 1.184 -0.763 D 302 300 3 303 3 0 0 15 33 -6.174 -1.687 -0.566 IL 303 303 3 303 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 74 ] 83 - A - - - ML 304 303 3 306 3 1 1 13 32 -7.468 -0.029 -6.122 1.395 -1.417 -1.141 -0.882 D 305 303 3 306 3 0 0 13 32 -6.174 -1.687 -0.566 IL 306 306 3 306 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 75 ] 84 - A - - - ML 307 306 3 309 2 1 1 1 1 * 0.000 1.361 -1.370 -1.046 -0.836 D 308 306 3 309 2 0 0 0 0 * 0.000 IL 309 309 3 309 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 76 ] - - - - - - E 310 309 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME HIV_PBS ACC RF00375 DESC HIV primer binding site (PBS) LENG 99 MAXL 198 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 23 15:14:57 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/3DNew/RF00375/CM NSEQ 132 EFFN 1.720093 CKSUM 2471111308 STATS LOCAL MSV -8.7538 0.71857 STATS LOCAL VITERBI -10.2766 0.71857 STATS LOCAL FORWARD -3.2509 0.71857 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.31520 1.43460 1.28798 1.52535 1.38629 1.38629 1.38629 1.38629 0.05467 3.52962 3.73432 1.30631 0.31583 0.00000 * 1 2.89511 0.29288 2.58540 2.09368 3 C - - [ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 2 2.61153 1.60146 2.35494 0.46191 4 U - - [ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 3 2.71337 0.38756 2.40292 1.80472 5 C - - [ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 4 2.56254 1.55919 2.28162 0.49353 6 U - - [ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 5 2.07230 2.55899 0.34437 2.42979 7 G - - [ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 6 2.38210 2.90252 0.22955 2.84958 8 G - - [ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 7 2.54307 1.51845 2.26249 0.51378 9 U - - [ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 8 0.22116 2.91602 2.67238 2.58795 10 A - - , 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 9 0.72171 2.19300 1.48532 1.73687 11 a - - , 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 10 2.88643 0.33241 2.61222 1.87299 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 11 2.63998 1.66272 2.34539 0.44129 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 12 0.50055 2.40415 1.56953 2.35053 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 13 2.33329 2.91695 0.23524 2.83799 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 14 0.52043 2.35689 1.57145 2.27035 16 A - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 15 2.29951 2.86799 0.24556 2.80325 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 16 0.50100 2.40307 1.56948 2.34881 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 17 2.32713 1.74979 2.07226 0.50631 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 18 2.61877 0.41666 2.41423 1.72359 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 19 2.73938 0.35973 2.53008 1.84596 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 20 2.86673 0.32971 2.63600 1.88168 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 21 2.31228 2.32823 2.81514 0.29625 23 U - - - 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 22 2.25023 0.59870 2.04804 1.53197 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 23 0.22116 2.91602 2.67238 2.58795 25 A - - - 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 24 1.99250 2.43850 0.39000 2.30964 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 25 0.68380 2.06812 1.50722 1.91488 27 A - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 26 2.35620 0.57535 2.11183 1.50644 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 27 1.69168 0.66900 2.40739 1.54403 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 28 1.46546 0.98314 2.17054 1.27019 30 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 29 1.63014 1.50091 2.18354 0.75816 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 30 1.85514 1.97314 2.37801 0.49133 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 31 1.74931 1.88846 2.07692 0.59877 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 32 1.73793 1.98465 2.12487 0.56698 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 33 0.65660 2.07061 2.04069 1.49014 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 34 1.82750 2.25749 0.48615 2.12376 36 G - - > 1.38629 1.38629 1.38629 1.38629 0.05275 3.73432 3.59379 1.46634 0.26236 1.09861 0.40547 35 2.14262 1.66563 1.73530 0.65926 37 U - - > 1.38629 1.38629 1.38629 1.38629 0.04914 3.73071 3.73071 1.46634 0.26236 1.00715 0.45454 36 2.57186 0.48991 2.25982 1.57719 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 37 0.60605 1.94908 2.10257 1.66097 39 A - - - 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 38 1.79966 2.21760 0.51844 2.03773 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 39 1.80853 1.92865 2.27890 0.53041 41 U - - - 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 40 2.12564 2.80751 0.28707 2.66171 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 41 1.84910 1.96838 2.29289 0.50756 43 U - - - 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 42 1.93078 2.69738 0.34577 2.52692 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 43 1.83170 2.58450 0.39332 2.41228 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.05312 3.58126 3.73432 1.34263 0.30267 1.09861 0.40547 44 0.26209 2.72204 2.56247 2.43376 48 A - - - 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 45 0.22116 2.91602 2.67238 2.58795 49 A - - - 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 46 0.22116 2.91602 2.67238 2.58795 50 A - - - 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 47 0.56697 2.23921 1.57381 2.12897 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 48 2.57873 1.82748 2.21821 0.42387 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 49 3.01892 0.28735 2.69581 2.01433 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 50 2.46468 1.80530 2.17123 0.45177 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 51 3.04879 0.27529 2.74328 2.04894 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 52 2.57793 1.82744 2.21796 0.42402 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 53 0.50379 2.51957 1.49939 2.38589 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 54 2.14054 2.76871 0.29131 2.62576 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 55 2.21153 0.37404 2.82375 1.94399 59 C - - , 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 56 1.13137 1.62604 1.42115 1.43018 60 a - - ( 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 57 2.36046 3.18655 0.22181 2.76079 61 G - - - 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 58 2.63332 1.66270 2.34295 0.44240 62 U - - ( 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 59 2.07132 1.87844 0.54354 1.96280 63 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 60 2.11120 2.97399 0.28645 2.56545 64 G - - - 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 61 2.88308 0.32555 2.64335 1.89190 65 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 62 1.97593 2.42643 0.39470 2.31125 66 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 63 2.88643 0.33241 2.61222 1.87299 67 C - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 64 2.88276 0.33298 2.61070 1.87243 68 C - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 65 2.83668 0.34842 2.59207 1.82813 69 C - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 66 2.03559 2.94963 0.30456 2.53088 70 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 67 0.25411 2.81578 2.50748 2.48813 71 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 68 0.36499 2.38834 2.32277 2.15405 72 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 69 2.02985 0.49598 2.39931 1.77850 73 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 70 0.31984 2.59833 2.46444 2.16911 74 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 71 2.07241 2.74948 0.30652 2.60161 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 72 2.14323 2.77187 0.29023 2.62991 76 G - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 73 2.14054 2.76871 0.29131 2.62576 77 G - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 74 0.34056 2.59467 2.23449 2.23576 78 A - - , 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 75 2.81089 0.33798 2.58791 1.88741 79 C - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 76 1.74859 1.26964 1.62218 1.05676 80 u - - < 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 77 1.68330 1.68072 2.05561 0.69318 81 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 78 2.07055 2.87573 0.31872 2.40322 82 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 79 0.22116 2.91602 2.67238 2.58795 83 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 80 0.24929 2.82964 2.52910 2.50250 84 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 81 1.08008 1.81820 1.22931 1.58172 85 a - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 82 2.02088 2.75159 0.31688 2.58739 86 G - - > 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 83 2.48657 0.50257 2.24485 1.58044 87 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 84 2.12334 2.80912 0.28730 2.66182 88 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 85 0.22116 2.91602 2.67238 2.58795 89 A - - - 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 86 0.66890 1.98405 1.70341 1.78286 90 A - - ) 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 87 0.50233 2.52393 1.49934 2.39190 91 A - - ) 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 88 2.09173 2.99144 0.28780 2.57180 92 G - - - 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 89 1.49174 1.58236 1.35931 1.16254 93 u - - ) 1.38629 1.38629 1.38629 1.38629 0.05270 3.73432 3.59549 1.46634 0.26236 1.09861 0.40547 90 0.80069 2.26109 1.24352 1.84279 94 a - - , 1.38629 1.38629 1.38629 1.38629 0.04914 3.73076 3.73076 1.46634 0.26236 1.00823 0.45391 91 0.73202 2.25133 1.37353 1.82887 95 a - - , 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 92 0.57860 2.35604 1.58106 1.97498 96 A - - , 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 93 0.61259 2.42519 1.30844 2.30905 97 A - - ] 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 94 3.06797 0.26877 2.73297 2.08637 98 C - - ] 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 95 2.69013 0.38697 2.38003 1.82966 99 C - - ] 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 96 0.59474 2.44542 1.33153 2.32758 100 A - - ] 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 97 2.10134 2.59400 0.32928 2.48238 101 G - - ] 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 98 0.51669 2.51991 1.46771 2.37962 102 A - - ] 1.38629 1.38629 1.38629 1.38629 0.04896 3.73432 3.73432 1.46634 0.26236 1.09861 0.40547 99 2.32539 2.79704 0.25863 2.67138 103 G - - ] 1.38629 1.38629 1.38629 1.38629 0.02763 3.60256 * 1.37673 0.29089 0.00000 * //