INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-BART2 ACC RF00364 DESC mir-BART2 microRNA precursor family STATES 190 NODES 43 CLEN 62 W 77 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 04:27:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00364/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 8 EFFN 2.035156 CKSUM 3919200039 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 82.80 NC 40.10 EFP7GF -9.3430 0.71922 ECMLC 0.65449 -2.96695 5.44177 1600000 294628 0.004073 ECMGC 0.45651 -13.33091 -0.20916 1600000 159791 0.002503 ECMLI 0.64206 -1.52194 6.64056 1600000 226584 0.005296 ECMGI 0.46435 -9.73011 2.25442 1600000 104453 0.003829 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 77 97 -6.991 -7.198 -0.389 -2.174 IL 1 1 2 1 4 1 13 81 101 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 12 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 1 12 77 97 -7.705 -0.025 -6.359 0.694 -0.781 -0.915 0.345 D 4 2 3 5 3 0 7 76 95 -7.649 -3.162 -0.179 IL 5 5 3 5 3 1 12 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - u - - - ML 6 5 3 8 3 1 11 76 96 -8.114 -0.022 -6.432 0.009 0.109 -0.985 0.496 D 7 5 3 8 3 0 7 75 95 -6.679 -0.306 -2.462 IL 8 8 3 8 3 1 10 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 62 - A - - MR 9 8 3 11 3 1 11 75 95 -8.392 -0.018 -6.710 1.736 -2.452 -2.076 -2.002 D 10 8 3 11 3 0 4 74 93 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 9 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 61 - A - - MR 12 11 3 14 5 1 11 74 94 -7.128 -0.038 -6.944 -7.156 -8.047 1.736 -2.452 -2.076 -2.002 D 13 11 3 14 5 0 3 73 92 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 1 7 75 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 60 u a - - MP 15 14 3 19 6 2 12 73 93 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 0.524 -2.422 -2.517 0.828 -2.214 -3.326 1.627 -2.664 -2.559 0.983 -3.089 -0.720 2.210 -2.683 -0.166 -1.641 ML 16 14 3 19 6 1 5 72 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 5 72 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 1 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 6 73 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 7 73 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 59 a u - - MP 21 20 6 25 6 2 11 71 91 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -2.852 -2.380 -2.974 2.272 -3.028 -3.983 0.898 -3.158 -2.949 1.362 -3.490 -0.175 0.576 -3.241 -0.905 1.457 ML 22 20 6 25 6 1 5 70 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 4 70 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 6 71 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 6 71 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 58 a a - - MP 27 26 6 31 6 2 11 69 89 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 1.839 -2.588 -2.747 0.705 -2.384 -3.535 1.516 -2.840 -2.781 0.901 -3.285 -0.766 1.711 -2.945 -0.300 -1.843 ML 28 26 6 31 6 1 4 68 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 4 68 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 6 69 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 6 69 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 57 u a - - MP 33 32 6 37 6 2 10 67 87 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 0.604 -2.421 -2.517 0.827 -2.214 -3.325 1.623 -2.664 -2.559 0.982 -3.088 -0.719 2.187 -2.683 -0.168 -1.641 ML 34 32 6 37 6 1 4 66 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 4 66 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 5 67 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 6 67 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 56 u a - - MP 39 38 6 43 6 2 8 65 85 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 1.034 -2.439 -2.545 0.807 -2.238 -3.348 1.598 -2.687 -2.587 0.971 -3.111 -0.723 2.058 -2.715 -0.191 -1.669 ML 40 38 6 43 6 1 4 64 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 3 64 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 5 65 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 5 65 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 55 u a - - MP 45 44 6 49 6 2 7 63 83 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -0.802 -2.709 -2.817 0.637 -2.434 -3.621 1.538 -2.909 -2.849 0.824 -3.374 -0.934 2.710 -2.984 -0.318 -1.886 ML 46 44 6 49 6 1 3 62 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 3 62 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 60 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 4 63 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 4 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 54 u g - - MP 51 50 6 55 6 2 5 61 81 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -2.645 -2.722 -0.465 0.566 -2.238 -3.466 1.959 -2.775 -2.775 0.718 -3.273 -1.058 1.214 -2.906 2.013 -1.829 ML 52 50 6 55 6 1 3 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 2 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 59 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 3 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 3 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 53 U A - - MP 57 56 6 61 4 2 3 59 79 -6.991 -7.198 -0.156 -3.510 -4.286 -4.114 -4.114 -0.402 -3.036 -4.669 1.295 -3.738 -4.118 -0.162 -4.486 -2.010 3.372 -4.434 -0.709 -2.932 ML 58 56 6 61 4 1 2 60 79 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 4 1 1 59 79 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 60 56 6 61 4 0 0 58 78 -4.568 -4.250 -2.265 -0.520 IL 61 61 5 61 4 1 3 61 81 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 62 62 6 62 3 1 3 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - U - - - ML 63 62 6 65 3 1 3 57 76 -8.305 -0.019 -6.622 -0.569 -0.887 -0.740 1.129 D 64 62 6 65 3 0 0 56 75 -6.066 -0.499 -1.849 IL 65 65 3 65 3 1 1 58 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 52 - G - - MR 66 65 3 68 5 1 3 56 75 -7.128 -0.038 -6.944 -7.156 -8.047 -1.665 -2.899 1.742 -2.286 D 67 65 3 68 5 0 0 55 74 -5.352 -0.707 -2.978 -4.409 -2.404 IR 68 68 3 68 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 51 u g - - MP 69 68 3 73 6 2 3 55 74 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -4.016 -4.030 -3.752 -0.365 -2.525 -4.181 2.133 -3.306 -3.801 -0.159 -4.106 -2.132 0.950 -4.091 2.788 -2.674 ML 70 68 3 73 6 1 1 54 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 3 73 6 1 1 54 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 3 73 6 0 0 52 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 55 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 54 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 50 A U - - MP 75 74 6 79 4 2 2 53 72 -6.991 -7.198 -0.052 -5.612 -3.866 -2.878 -3.879 3.378 -4.254 -5.323 0.051 -3.916 -3.767 0.998 -4.319 -0.342 -0.366 -4.499 -1.890 -2.708 ML 76 74 6 79 4 1 1 53 73 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 4 1 1 53 72 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 78 74 6 79 4 0 0 52 71 -4.568 -4.250 -2.265 -0.520 IL 79 79 5 79 4 1 1 55 74 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 80 80 6 80 3 1 1 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 14 - U - - - ML 81 80 6 83 3 1 1 50 69 -8.392 -0.018 -6.710 -1.560 -1.543 -2.297 1.639 D 82 80 6 83 3 0 0 49 68 -5.620 -0.734 -1.403 IL 83 83 3 83 3 1 1 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 49 - U - - MR 84 83 3 86 3 1 1 49 68 -8.392 -0.018 -6.710 -1.560 -1.543 -2.297 1.639 D 85 83 3 86 3 0 0 48 67 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 48 - U - - MR 87 86 3 89 5 1 1 48 67 -7.128 -0.038 -6.944 -7.156 -8.047 -1.560 -1.543 -2.297 1.639 D 88 86 3 89 5 0 0 47 66 -5.352 -0.707 -2.978 -4.409 -2.404 IR 89 89 3 89 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 15 47 U A - - MP 90 89 3 94 6 2 2 47 66 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -4.286 -4.114 -4.114 -0.402 -3.036 -4.669 1.295 -3.738 -4.118 -0.162 -4.486 -2.010 3.372 -4.434 -0.709 -2.932 ML 91 89 3 94 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 3 94 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 3 94 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 16 46 C G - - MP 96 95 6 100 6 2 2 45 64 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -4.640 -4.554 -4.315 -0.778 -3.013 -4.715 3.578 -3.832 -4.367 -0.551 -4.618 -2.503 0.492 -4.703 -0.722 -3.204 ML 97 95 6 100 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 45 G C - - MP 102 101 6 106 6 2 2 43 62 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -4.824 -3.133 -4.931 0.146 -5.348 -4.726 -0.692 -5.179 -4.381 3.657 -4.712 -0.835 -1.075 -4.521 -2.734 -3.806 ML 103 101 6 106 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 18 44 C G - - MP 108 107 6 112 4 2 2 41 60 -6.904 -8.149 -0.079 -4.603 -4.640 -4.554 -4.315 -0.778 -3.013 -4.715 3.578 -3.832 -4.367 -0.551 -4.618 -2.503 0.492 -4.703 -0.722 -3.204 ML 109 107 6 112 4 1 1 41 60 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 4 1 1 40 59 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 111 107 6 112 4 0 0 38 57 -12.737 -14.007 -2.036 -0.404 IL 112 112 5 112 4 1 1 41 60 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 113 113 6 113 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 43 - A - - MR 114 113 6 116 5 1 1 39 58 -7.128 -0.038 -6.944 -7.156 -8.047 1.736 -2.452 -2.076 -2.002 D 115 113 6 116 5 0 0 38 57 -5.352 -0.707 -2.978 -4.409 -2.404 IR 116 116 3 116 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 19 42 C G - - MP 117 116 3 121 6 2 2 38 57 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -4.640 -4.554 -4.315 -0.778 -3.013 -4.715 3.578 -3.832 -4.367 -0.551 -4.618 -2.503 0.492 -4.703 -0.722 -3.204 ML 118 116 3 121 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 3 121 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 3 121 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 20 41 C G - - MP 123 122 6 127 6 2 2 36 55 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -4.640 -4.554 -4.315 -0.778 -3.013 -4.715 3.578 -3.832 -4.367 -0.551 -4.618 -2.503 0.492 -4.703 -0.722 -3.204 ML 124 122 6 127 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 21 40 U A - - MP 129 128 6 133 6 2 2 34 53 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -4.286 -4.114 -4.114 -0.402 -3.036 -4.669 1.295 -3.738 -4.118 -0.162 -4.486 -2.010 3.372 -4.434 -0.709 -2.932 ML 130 128 6 133 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 22 39 U A - - MP 135 134 6 139 6 2 2 32 51 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -4.286 -4.114 -4.114 -0.402 -3.036 -4.669 1.295 -3.738 -4.118 -0.162 -4.486 -2.010 3.372 -4.434 -0.709 -2.932 ML 136 134 6 139 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 23 38 G C - - MP 141 140 6 145 6 2 2 30 49 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -4.824 -3.133 -4.931 0.146 -5.348 -4.726 -0.692 -5.179 -4.381 3.657 -4.712 -0.835 -1.075 -4.521 -2.734 -3.806 ML 142 140 6 145 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 24 37 C G - - MP 147 146 6 151 6 2 2 28 47 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -4.640 -4.554 -4.315 -0.778 -3.013 -4.715 3.578 -3.832 -4.367 -0.551 -4.618 -2.503 0.492 -4.703 -0.722 -3.204 ML 148 146 6 151 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 27 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 25 36 G U - - MP 153 152 6 157 4 2 2 26 45 -6.991 -7.198 -0.052 -5.612 -3.668 -2.422 -3.839 1.101 -4.599 -5.323 -0.194 -3.856 -3.488 1.287 -4.012 3.136 -0.551 -4.520 -2.136 -2.529 ML 154 152 6 157 4 1 1 27 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 26 46 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 25 45 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 28 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 26 - U - - - ML 159 158 6 161 3 1 1 23 42 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 160 158 6 161 3 0 0 22 41 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 27 - G - - - ML 162 161 3 164 3 1 1 22 41 -8.004 -0.020 -6.658 -1.665 -2.899 1.742 -2.286 D 163 161 3 164 3 0 0 21 40 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 28 - U - - - ML 165 164 3 167 3 1 1 21 40 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 166 164 3 167 3 0 0 20 39 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 29 - C - - - ML 168 167 3 170 3 1 1 20 39 -8.004 -0.020 -6.658 -1.838 1.649 -2.665 -1.232 D 169 167 3 170 3 0 0 19 38 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 30 - C - - - ML 171 170 3 173 3 1 1 19 37 -8.004 -0.020 -6.658 -1.838 1.649 -2.665 -1.232 D 172 170 3 173 3 0 0 18 37 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 31 - A - - - ML 174 173 3 176 3 1 1 17 36 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 175 173 3 176 3 0 0 17 36 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - U - - - ML 177 176 3 179 3 1 1 16 35 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 178 176 3 179 3 0 0 16 34 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - U - - - ML 180 179 3 182 3 1 1 15 33 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 181 179 3 182 3 0 0 15 33 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 34 - G - - - ML 183 182 3 185 3 1 1 13 31 -8.004 -0.020 -6.658 -1.665 -2.899 1.742 -2.286 D 184 182 3 185 3 0 0 13 32 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 35 - U - - - ML 186 185 3 188 2 1 1 1 1 * 0.000 -1.560 -1.543 -2.297 1.639 D 187 185 3 188 2 0 0 0 0 * 0.000 IL 188 188 3 188 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 42 ] - - - - - - E 189 188 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-BART2 ACC RF00364 DESC mir-BART2 microRNA precursor family LENG 62 MAXL 146 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 04:27:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00364/CM NSEQ 8 EFFN 2.957031 CKSUM 3919200039 STATS LOCAL MSV -8.5917 0.71922 STATS LOCAL VITERBI -8.7102 0.71922 STATS LOCAL FORWARD -4.1506 0.71922 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.42455 1.59280 1.39607 1.17617 1.38629 1.38629 1.38629 1.38629 0.27860 3.93229 1.49807 1.46634 0.26236 0.00000 * 1 0.86406 2.00427 2.10897 1.13187 1 a - - : 1.38629 1.38629 1.38629 1.38629 0.05049 3.70418 3.70418 1.46634 0.26236 2.59577 0.07752 2 1.40907 1.26093 2.15713 1.03119 2 u - - : 1.38629 1.38629 1.38629 1.38629 0.05049 3.70418 3.70418 1.46634 0.26236 0.16155 1.90262 3 1.42658 1.60950 1.94018 0.87658 3 u - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 4 0.95834 2.37011 1.68293 1.08717 4 a - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 5 0.85115 1.75161 2.12095 1.27417 5 a - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 6 1.39639 1.61369 1.94514 0.89064 6 u - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 7 1.21959 1.64483 1.98247 0.98383 7 u - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 8 1.93261 1.68266 2.05063 0.61490 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 9 1.92625 1.34166 2.22896 0.72308 9 u - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 10 3.29227 2.15226 3.07922 0.22238 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.11364 3.93229 2.43241 1.46634 0.26236 1.09861 0.40547 11 1.95267 2.15693 1.96758 0.50645 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04298 3.86162 3.86162 1.46634 0.26236 0.36902 1.17575 12 3.14177 1.30947 2.96465 0.45373 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 13 0.24481 3.11761 2.08180 3.03288 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 14 2.87218 2.79230 3.39883 0.16401 14 U - - - 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 15 3.29842 2.15277 3.08222 0.22184 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 16 3.48582 0.17996 3.29244 2.33401 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 17 2.76549 3.51694 0.13264 3.45503 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 18 3.48377 0.18013 3.29139 2.33363 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 19 3.45145 0.18279 3.27465 2.32760 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 20 3.46632 0.18156 3.28238 2.33039 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 21 3.28893 2.15198 3.07758 0.22267 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 22 3.29111 2.15216 3.07865 0.22248 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 23 2.76173 3.51198 0.13333 3.44825 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 24 3.47650 0.18072 3.28765 2.33229 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 25 2.04969 3.17236 0.24787 3.01875 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 26 2.87218 2.79230 3.39883 0.16401 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 27 2.97860 3.89156 0.10822 3.46435 27 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 28 2.87218 2.79230 3.39883 0.16401 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 29 3.18008 0.14502 3.75257 2.65995 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 30 3.18008 0.14502 3.75257 2.65995 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 31 0.11519 3.51547 3.21333 3.24814 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 32 2.87218 2.79230 3.39883 0.16401 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 33 2.87218 2.79230 3.39883 0.16401 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 34 2.97860 3.89156 0.10822 3.46435 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 35 2.87218 2.79230 3.39883 0.16401 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 36 3.21979 2.13491 2.96491 0.23545 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 37 2.61105 3.45440 0.15567 3.24179 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 38 3.63556 0.15896 3.35374 2.45754 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 39 0.25191 3.26949 1.98894 3.04040 39 A - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 40 0.25175 3.27058 1.98910 3.04164 40 A - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 41 2.61445 3.45947 0.15493 3.24763 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 42 2.61640 3.46239 0.15450 3.25100 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 43 0.11519 3.51547 3.21333 3.24814 43 A - - - 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 44 2.61458 3.45967 0.15490 3.24786 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 45 3.65048 0.15794 3.36071 2.46033 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 46 2.61802 3.46482 0.15415 3.25380 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 47 0.25043 3.27975 1.99046 3.05206 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 48 2.87218 2.79230 3.39883 0.16401 48 U - - - 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 49 2.87218 2.79230 3.39883 0.16401 49 U - - - 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 50 3.26468 2.40973 2.93152 0.20012 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 51 2.20628 3.12905 0.23339 2.91346 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 52 2.97860 3.89156 0.10822 3.46435 52 G - - - 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 53 0.25214 3.26790 1.98871 3.03860 53 A - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 54 1.91564 2.39102 0.43167 2.19110 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 55 0.61590 2.22806 1.50798 2.03446 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 56 0.66611 2.16506 1.46759 1.95847 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 57 0.70172 2.12440 1.43584 1.91834 57 a - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 58 0.55564 2.32286 1.57801 2.10442 58 A - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 59 2.48918 1.95154 2.17935 0.41271 59 U - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 60 0.70570 2.12063 1.43147 1.91512 60 a - - > 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 61 0.11519 3.51547 3.21333 3.24814 61 A - - : 1.38629 1.38629 1.38629 1.38629 0.03999 3.93229 3.93229 1.46634 0.26236 1.09861 0.40547 62 0.11519 3.51547 3.21333 3.24814 62 A - - : 1.38629 1.38629 1.38629 1.38629 0.02019 3.91249 * 1.46634 0.26236 0.00000 * //