INFERNAL1/a [1.1.5 | Sep 2023] NAME snoZ267 ACC RF00344 DESC Small nucleolar RNA Z267 STATES 223 NODES 69 CLEN 73 W 98 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 08:54:43 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00344/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 2.036133 CKSUM 1153157083 NULL 0.000 0.000 0.000 0.000 GA 43.00 TC 43.00 NC 42.90 EFP7GF -9.0169 0.71875 ECMLC 0.65453 -5.25104 3.36546 1600000 337670 0.003554 ECMGC 0.40309 -15.56648 -1.35351 1600000 123076 0.003250 ECMLI 0.60632 -3.76107 4.86981 1600000 224851 0.005337 ECMGI 0.43957 -9.93596 2.24360 1600000 84564 0.004730 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 98 128 -6.991 -7.198 -0.243 -2.832 IL 1 1 2 1 4 1 26 100 131 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 25 100 130 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 1 27 98 128 -7.834 -0.023 -6.488 0.533 -0.786 -0.986 0.554 D 4 2 3 5 3 0 19 95 126 -7.218 -2.731 -0.247 IL 5 5 3 5 3 1 25 99 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - u - - - ML 6 5 3 8 3 1 27 97 127 -8.233 -0.020 -6.551 0.533 -0.786 -0.986 0.554 D 7 5 3 8 3 0 19 95 125 -6.339 -1.453 -0.684 IL 8 8 3 8 3 1 24 97 128 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 76 - U - - MR 9 8 3 11 3 1 26 96 126 -8.233 -0.020 -6.551 -1.248 -1.287 -1.968 1.543 D 10 8 3 11 3 0 18 93 124 -7.312 -2.489 -0.294 IR 11 11 3 11 3 1 24 96 127 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 75 - U - - MR 12 11 3 14 5 1 26 95 125 -6.980 -0.042 -6.795 -7.008 -7.899 -1.248 -1.287 -1.968 1.543 D 13 11 3 14 5 0 17 93 123 -5.938 -1.293 -3.564 -4.995 -1.121 IR 14 14 3 14 5 1 23 95 125 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 74 a u - - MP 15 14 3 19 6 2 27 94 124 -9.055 -8.994 -0.022 -7.771 -8.051 -8.446 -3.199 -2.268 -3.312 2.330 -3.793 -4.502 0.432 -3.496 -3.195 1.747 -3.725 1.879 0.161 -3.675 -1.461 -2.171 ML 16 14 3 19 6 1 20 92 122 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 20 92 122 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 15 89 120 -9.896 -8.594 -4.391 -5.073 -5.091 -0.169 IL 19 19 5 19 6 1 22 93 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 23 93 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 73 u a - - MP 21 20 6 25 6 2 25 92 122 -9.055 -8.994 -0.022 -7.771 -8.051 -8.446 -2.980 -2.652 -3.037 1.841 -2.627 -3.856 1.614 -3.055 -3.053 1.393 -3.548 -0.534 1.977 -3.221 -0.357 -1.997 ML 22 20 6 25 6 1 19 90 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 19 90 120 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 15 89 119 -9.896 -8.594 -1.024 -5.073 -5.091 -1.166 IL 25 25 5 25 6 1 21 91 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 21 91 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 72 u a - - MP 27 26 6 31 6 2 24 90 120 -9.124 -9.063 -0.021 -7.840 -8.120 -8.515 -2.502 -2.521 -2.611 0.751 -2.257 -3.387 1.637 -2.734 -2.663 1.018 -3.176 -0.812 2.204 0.661 -0.180 -1.726 ML 28 26 6 31 6 1 19 88 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 18 88 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 13 85 115 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 20 89 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 20 89 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 71 G C - - MP 33 32 6 37 6 2 22 88 118 -9.124 -9.063 -0.021 -7.840 -8.120 -8.515 -4.824 -3.133 -4.931 0.145 -5.349 -4.726 -0.693 -5.180 -4.381 3.657 -4.712 -0.835 -1.076 -4.522 -2.734 -3.807 ML 34 32 6 37 6 1 18 86 117 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 17 86 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 13 83 114 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 19 87 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 19 87 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 70 C G - - MP 39 38 6 43 6 2 21 86 116 -9.124 -9.063 -0.021 -7.840 -8.120 -8.515 -4.641 -4.555 -4.316 -0.779 -3.013 -4.715 3.578 -3.833 -4.368 -0.551 -4.619 -2.503 0.492 -4.704 -0.722 -3.204 ML 40 38 6 43 6 1 17 84 115 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 15 84 115 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 13 82 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 18 85 116 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 18 85 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 69 C G - - MP 45 44 6 49 4 2 19 84 114 -6.991 -7.198 -0.052 -5.612 -4.641 -4.555 -4.316 -0.779 -3.013 -4.715 3.578 -3.833 -4.368 -0.551 -4.619 -2.503 0.492 -4.704 -0.722 -3.204 ML 46 44 6 49 4 1 16 83 114 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 4 1 14 82 113 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 48 44 6 49 4 0 12 81 112 -4.568 -4.250 -2.265 -0.520 IL 49 49 5 49 4 1 17 84 115 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 50 50 6 50 3 1 17 84 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 9 - U - - - ML 51 50 6 53 3 1 17 82 112 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 52 50 6 53 3 0 11 80 110 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 16 83 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 10 - g - - - ML 54 53 3 56 3 1 16 81 111 -8.004 -0.020 -6.658 0.483 -1.494 0.776 -0.902 D 55 53 3 56 3 0 11 79 109 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 15 82 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - U - - - ML 57 56 3 59 3 1 16 80 110 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 58 56 3 59 3 0 10 78 108 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 15 81 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - G - - - ML 60 59 3 62 3 1 15 79 109 -8.004 -0.020 -6.658 -1.666 -2.900 1.742 -2.287 D 61 59 3 62 3 0 9 77 107 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 14 80 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - A - - - ML 63 62 3 65 3 1 14 78 108 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 64 62 3 65 3 0 8 76 106 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 13 79 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 14 - U - - - ML 66 65 3 68 3 1 13 77 107 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 67 65 3 68 3 0 8 75 105 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 12 78 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 15 - G - - - ML 69 68 3 71 3 1 13 76 106 -8.004 -0.020 -6.658 -1.666 -2.900 1.742 -2.287 D 70 68 3 71 3 0 7 74 104 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 12 77 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 16 - G - - - ML 72 71 3 74 3 1 12 75 105 -8.004 -0.020 -6.658 -1.666 -2.900 1.742 -2.287 D 73 71 3 74 3 0 6 73 103 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 11 76 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 17 - U - - - ML 75 74 3 77 3 1 11 74 104 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 76 74 3 77 3 0 5 72 102 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 10 75 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 18 - G - - - ML 78 77 3 80 3 1 11 73 103 -8.004 -0.020 -6.658 -1.666 -2.900 1.742 -2.287 D 79 77 3 80 3 0 5 71 101 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 9 74 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 19 - U - - - ML 81 80 3 83 3 1 10 72 102 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 82 80 3 83 3 0 4 70 100 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 9 73 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 20 - U - - - ML 84 83 3 86 3 1 9 71 101 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 85 83 3 86 3 0 3 69 99 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 8 72 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 21 - A - - - ML 87 86 3 89 3 1 9 70 100 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 88 86 3 89 3 0 2 68 98 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 7 71 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 22 - A - - - ML 90 89 3 92 3 1 8 69 99 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 91 89 3 92 3 0 2 67 97 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 7 70 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 23 - A - - - ML 93 92 3 95 3 1 7 68 98 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 94 92 3 95 3 0 1 66 96 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 6 69 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 24 - U - - - ML 96 95 3 98 3 1 7 67 97 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 97 95 3 98 3 0 0 65 95 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 5 68 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 25 - A - - - ML 99 98 3 101 3 1 6 66 96 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 100 98 3 101 3 0 0 64 94 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 4 67 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 26 - U - - - ML 102 101 3 104 3 1 5 65 95 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 103 101 3 104 3 0 0 63 93 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 4 66 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 27 - A - - - ML 105 104 3 107 3 1 5 64 94 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 106 104 3 107 3 0 0 62 92 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 3 65 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 28 - C - - - ML 108 107 3 110 3 1 4 63 93 -8.004 -0.020 -6.658 -0.963 1.098 -1.781 0.078 D 109 107 3 110 3 0 0 61 91 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 3 64 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 29 - U - - - ML 111 110 3 113 3 1 4 62 92 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 112 110 3 113 3 0 0 60 90 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 63 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 30 - U - - - ML 114 113 3 116 3 1 3 61 91 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 115 113 3 116 3 0 0 59 89 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 2 62 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 31 - U - - - ML 117 116 3 119 3 1 3 60 90 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 118 116 3 119 3 0 0 58 88 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 61 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 32 - G - - - ML 120 119 3 122 3 1 2 59 89 -8.004 -0.020 -6.658 -1.666 -2.900 1.742 -2.287 D 121 119 3 122 3 0 0 57 87 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 60 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 33 - A - - - ML 123 122 3 125 3 1 2 58 88 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 124 122 3 125 3 0 0 56 86 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 59 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 34 - G - - - ML 126 125 3 128 3 1 2 57 87 -8.004 -0.020 -6.658 -1.666 -2.900 1.742 -2.287 D 127 125 3 128 3 0 0 55 85 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 58 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 35 - c - - - ML 129 128 3 131 3 1 1 56 86 -8.004 -0.020 -6.658 0.400 0.528 -1.201 -0.316 D 130 128 3 131 3 0 0 54 84 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 57 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 36 - a - - - ML 132 131 3 134 3 1 1 55 85 -8.004 -0.020 -6.658 0.436 -0.937 0.145 0.027 D 133 131 3 134 3 0 0 53 83 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 56 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 37 - a - - - ML 135 134 3 137 3 1 1 54 84 -8.004 -0.020 -6.658 0.436 -0.937 0.145 0.027 D 136 134 3 137 3 0 0 52 82 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 55 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 38 - u - - - ML 138 137 3 140 3 1 1 53 83 -8.004 -0.020 -6.658 -0.750 0.231 -1.518 0.913 D 139 137 3 140 3 0 0 51 81 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 54 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 39 - u - - - ML 141 140 3 143 3 1 1 52 82 -8.004 -0.020 -6.658 -0.276 -0.299 -0.012 0.454 D 142 140 3 143 3 0 0 49 80 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 53 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 40 - c - - - ML 144 143 3 146 3 1 1 51 81 -8.004 -0.020 -6.658 -0.124 0.970 -1.458 -0.398 D 145 143 3 146 3 0 0 48 78 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 52 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 41 - G - - - ML 147 146 3 149 3 1 1 50 80 -2.257 -0.357 -6.658 -1.666 -2.900 1.742 -2.287 D 148 146 3 149 3 0 0 44 75 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 51 82 -0.874 -1.213 -5.446 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - C - - - ML 150 149 3 152 3 1 1 39 58 -8.004 -0.020 -6.658 -1.839 1.650 -2.666 -1.233 D 151 149 3 152 3 0 0 37 57 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - U - - - ML 153 152 3 155 3 1 1 38 57 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 154 152 3 155 3 0 0 36 56 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - a - - - ML 156 155 3 158 3 1 1 37 56 -8.004 -0.020 -6.658 0.917 -1.420 0.240 -0.844 D 157 155 3 158 3 0 0 35 55 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - u - - - ML 159 158 3 161 3 1 1 36 55 -8.004 -0.020 -6.658 -0.750 0.231 -1.518 0.913 D 160 158 3 161 3 0 0 34 54 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - G - - - ML 162 161 3 164 3 1 1 34 54 -8.004 -0.020 -6.658 -1.666 -2.900 1.742 -2.287 D 163 161 3 164 3 0 0 33 53 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - A - - - ML 165 164 3 167 3 1 1 33 53 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 166 164 3 167 3 0 0 32 51 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - A - - - ML 168 167 3 170 3 1 1 32 51 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 169 167 3 170 3 0 0 31 50 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - A - - - ML 171 170 3 173 3 1 1 31 50 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 172 170 3 173 3 0 0 30 49 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - A - - - ML 174 173 3 176 3 1 1 30 49 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 175 173 3 176 3 0 0 29 48 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 54 - A - - - ML 177 176 3 179 3 1 1 29 48 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 178 176 3 179 3 0 0 28 47 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 55 - u - - - ML 180 179 3 182 3 1 1 28 47 -8.004 -0.020 -6.658 0.330 -0.852 -1.123 0.790 D 181 179 3 182 3 0 0 27 46 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 56 - A - - - ML 183 182 3 185 3 1 1 27 46 -8.004 -0.020 -6.658 1.171 -0.552 -1.213 -0.654 D 184 182 3 185 3 0 0 26 45 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 57 - a - - - ML 186 185 3 188 3 1 1 26 45 -8.004 -0.020 -6.658 0.838 0.001 -1.124 -0.411 D 187 185 3 188 3 0 0 25 44 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 58 - u - - - ML 189 188 3 191 3 1 1 25 43 -8.004 -0.020 -6.658 0.330 -0.852 -1.123 0.790 D 190 188 3 191 3 0 0 24 43 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 59 - U - - - ML 192 191 3 194 3 1 1 23 42 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 193 191 3 194 3 0 0 22 41 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 60 - a - - - ML 195 194 3 197 3 1 1 22 41 -8.004 -0.020 -6.658 0.371 0.111 -1.043 0.191 D 196 194 3 197 3 0 0 21 40 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 61 - a - - - ML 198 197 3 200 3 1 1 21 40 -8.004 -0.020 -6.658 0.371 0.111 -1.043 0.191 D 199 197 3 200 3 0 0 20 39 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 62 - A - - - ML 201 200 3 203 3 1 1 20 39 -8.004 -0.020 -6.658 1.736 -2.453 -2.077 -2.003 D 202 200 3 203 3 0 0 19 38 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 63 - a - - - ML 204 203 3 206 3 1 1 19 37 -8.004 -0.020 -6.658 0.838 0.001 -1.124 -0.411 D 205 203 3 206 3 0 0 18 37 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 64 - U - - - ML 207 206 3 209 3 1 1 17 36 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 208 206 3 209 3 0 0 17 36 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 65 - C - - - ML 210 209 3 212 3 1 1 16 35 -8.004 -0.020 -6.658 -1.839 1.650 -2.666 -1.233 D 211 209 3 212 3 0 0 16 34 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 66 - U - - - ML 213 212 3 215 3 1 1 15 33 -8.004 -0.020 -6.658 -1.560 -1.544 -2.298 1.639 D 214 212 3 215 3 0 0 15 33 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 67 - G - - - ML 216 215 3 218 3 1 1 13 31 -8.004 -0.020 -6.658 -1.666 -2.900 1.742 -2.287 D 217 215 3 218 3 0 0 13 32 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 68 - A - - - ML 219 218 3 221 2 1 1 1 1 * 0.000 1.736 -2.453 -2.077 -2.003 D 220 218 3 221 2 0 0 0 0 * 0.000 IL 221 221 3 221 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 68 ] - - - - - - E 222 221 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME snoZ267 ACC RF00344 DESC Small nucleolar RNA Z267 LENG 73 MAXL 161 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 08:54:43 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00344/CM NSEQ 5 EFFN 2.290039 CKSUM 1153157083 STATS LOCAL MSV -8.9277 0.71875 STATS LOCAL VITERBI -9.2909 0.71875 STATS LOCAL FORWARD -3.5391 0.71875 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.21197 1.76737 1.48204 1.18930 1.38629 1.38629 1.38629 1.38629 0.17598 3.94238 1.95216 1.46634 0.26236 0.00000 * 1 1.00837 1.95651 2.09822 0.99112 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.04523 3.81163 3.81163 1.46634 0.26236 2.23185 0.11354 2 1.00837 1.95651 2.09822 0.99112 2 u - - : 1.38629 1.38629 1.38629 1.38629 0.04523 3.81163 3.81163 1.46634 0.26236 2.23185 0.11354 3 1.04235 2.40832 0.79260 2.25625 3 g - - < 1.38629 1.38629 1.38629 1.38629 0.04523 3.81163 3.81163 1.46634 0.26236 2.23185 0.11354 4 1.35817 1.56804 1.55090 1.13209 4 u - - < 1.38629 1.38629 1.38629 1.38629 0.04523 3.81163 3.81163 1.46634 0.26236 0.24164 1.53871 5 2.02606 1.52486 1.78676 0.72775 5 u - - < 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 6 2.56311 3.20730 0.17510 3.14428 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 7 3.15995 0.24780 2.93725 2.08712 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 8 3.16116 0.24766 2.93783 2.08733 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 9 2.58673 2.55466 3.10318 0.22051 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 10 1.04600 2.48184 0.82216 2.07473 10 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 11 2.58673 2.55466 3.10318 0.22051 11 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 12 2.67475 3.54909 0.15272 3.12461 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 13 0.15917 3.21449 2.94100 2.91580 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 14 2.58673 2.55466 3.10318 0.22051 14 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 15 2.67475 3.54908 0.15272 3.12461 15 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 16 2.67475 3.54908 0.15272 3.12461 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 17 2.58673 2.55466 3.10318 0.22051 17 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 18 2.67475 3.54908 0.15272 3.12461 18 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 19 2.58673 2.55466 3.10318 0.22051 19 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 20 2.58673 2.55466 3.10318 0.22051 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 21 0.15917 3.21449 2.94100 2.91580 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 22 0.15917 3.21449 2.94100 2.91580 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 23 0.15917 3.21449 2.94100 2.91580 23 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 24 2.58673 2.55466 3.10318 0.22051 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 25 0.15917 3.21449 2.94100 2.91580 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 26 2.58673 2.55466 3.10318 0.22051 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 27 0.15917 3.21449 2.94100 2.91580 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 28 2.12530 0.58985 2.70085 1.35077 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 29 2.58673 2.55466 3.10318 0.22051 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 30 2.58673 2.55466 3.10318 0.22051 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 31 2.58673 2.55466 3.10318 0.22051 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 32 2.67475 3.54908 0.15272 3.12461 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 33 0.15917 3.21449 2.94100 2.91580 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 34 2.67475 3.54908 0.15272 3.12461 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 35 1.10406 0.99150 2.26613 1.64120 35 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 36 1.08118 2.06158 1.27216 1.37308 36 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 37 1.08118 2.06158 1.27216 1.37308 37 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 38 1.95907 1.21057 2.49698 0.73678 38 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 39 1.60126 1.59313 1.37989 1.06868 39 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 40 1.49474 0.67454 2.46358 1.70832 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 41 2.67475 3.54909 0.15272 3.12461 41 G - - _ 1.38629 1.38629 1.38629 1.38629 0.30666 1.40773 3.94238 1.12021 0.39484 1.09861 0.40547 42 2.81624 0.20755 3.39200 2.36496 45 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 43 2.58673 2.55466 3.10318 0.22051 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 44 0.73219 2.42822 1.20438 2.03199 47 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 45 1.95907 1.21057 2.49698 0.73678 48 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 46 2.67475 3.54908 0.15272 3.12461 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 47 0.15917 3.21449 2.94100 2.91580 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 48 0.15917 3.21449 2.94100 2.91580 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 49 0.15917 3.21449 2.94100 2.91580 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 50 0.15917 3.21449 2.94100 2.91580 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 51 0.15917 3.21449 2.94100 2.91580 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 52 1.15414 2.01040 2.20019 0.82108 55 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 53 0.54886 1.77537 2.27984 1.89267 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 54 0.78525 1.37237 2.20892 1.71107 57 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 55 1.15414 2.01040 2.20019 0.82108 58 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 56 2.58673 2.55466 3.10318 0.22051 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 57 1.12443 1.29406 2.13924 1.26137 60 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 58 1.12443 1.29406 2.13924 1.26137 61 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 59 0.15917 3.21449 2.94100 2.91580 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 60 0.78525 1.37237 2.20892 1.71107 63 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 61 2.58673 2.55466 3.10318 0.22051 64 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 62 2.81624 0.20755 3.39200 2.36496 65 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 63 2.58673 2.55466 3.10318 0.22051 66 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 64 2.67475 3.54909 0.15272 3.12461 67 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 65 0.15917 3.21449 2.94100 2.91580 68 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 66 2.36258 3.10487 0.21414 2.92326 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 67 2.36254 3.10482 0.21415 2.92320 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 68 3.34631 0.20650 3.04350 2.26630 71 C - - > 1.38629 1.38629 1.38629 1.38629 0.03958 3.94238 3.94238 1.46634 0.26236 1.09861 0.40547 69 1.09485 1.40801 1.34660 1.82846 72 a - - > 1.38629 1.38629 1.38629 1.38629 0.17598 3.94238 1.95216 1.46634 0.26236 1.09861 0.40547 70 1.27614 1.72608 1.39717 1.21871 73 u - - > 1.38629 1.38629 1.38629 1.38629 0.04523 3.81163 3.81163 1.46634 0.26236 2.23185 0.11354 71 2.48495 1.52783 2.21888 0.52605 74 U - - > 1.38629 1.38629 1.38629 1.38629 0.04523 3.81163 3.81163 1.46634 0.26236 2.23185 0.11354 72 2.35252 2.36126 2.85767 0.28347 75 U - - : 1.38629 1.38629 1.38629 1.38629 0.04523 3.81163 3.81163 1.46634 0.26236 2.23185 0.11354 73 2.35252 2.36126 2.85767 0.28347 76 U - - : 1.38629 1.38629 1.38629 1.38629 0.02287 3.78926 * 1.46634 0.26236 0.00000 * //