INFERNAL1/a [1.1.5 | Sep 2023] NAME snoR43 ACC RF00316 DESC Small nucleolar RNA R43 STATES 223 NODES 68 CLEN 73 W 90 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 02:45:32 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00316/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 16 EFFN 2.035156 CKSUM 1973902349 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 56.10 NC 43.20 EFP7GF -9.2060 0.71877 ECMLC 0.58274 -6.53302 3.14016 1600000 336716 0.003564 ECMGC 0.40399 -15.22489 -1.85752 1600000 88583 0.004516 ECMLI 0.55899 -4.57883 5.03598 1600000 259017 0.004633 ECMGI 0.45822 -9.38718 1.83488 1600000 68436 0.005845 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 90 111 -9.124 -9.063 -0.118 -7.840 -3.889 -8.515 IL 1 1 2 1 6 1 29 92 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 29 92 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 74 A U - - MP 3 2 3 7 6 2 30 90 111 -9.029 -8.968 -0.022 -7.744 -8.024 -8.419 -3.482 -2.597 -3.520 3.083 -3.707 -4.747 0.575 -3.579 -3.428 1.415 -3.959 -0.129 0.155 -3.984 -1.369 -2.375 ML 4 2 3 7 6 1 26 89 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 25 89 109 -7.792 -6.521 -1.453 -6.499 -0.811 -4.713 -0.439 -0.658 -1.088 1.110 D 6 2 3 7 6 0 22 86 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 28 90 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 28 90 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 73 G C - - MP 9 8 6 13 6 2 28 88 109 -9.069 -9.009 -0.022 -7.785 -8.065 -8.460 -4.561 -3.008 -4.645 0.319 -4.978 -4.622 -0.387 -4.874 -4.207 3.592 -4.558 -0.701 -0.778 -4.349 -2.415 -3.525 ML 10 8 6 13 6 1 25 87 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 23 87 107 -7.506 -6.235 -2.144 -6.214 -0.525 -4.427 -0.165 0.618 -0.876 0.041 D 12 8 6 13 6 0 21 85 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 26 88 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 26 88 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 72 a u - - MP 15 14 6 19 4 2 27 86 107 -4.056 -7.053 -0.136 -5.467 -2.679 -2.386 -2.797 2.355 -2.699 -3.716 1.196 0.659 -2.807 1.265 -3.339 -0.336 0.845 -3.022 -0.607 -1.854 ML 16 14 6 19 4 1 24 86 106 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 4 1 22 85 105 -5.393 -4.422 -2.289 -0.464 -0.194 -0.501 -0.815 0.888 D 18 14 6 19 4 0 21 84 105 -4.568 -4.250 -2.265 -0.520 IL 19 19 5 19 4 1 26 87 107 -1.960 -2.644 -0.851 -5.129 0.000 0.000 0.000 0.000 IR 20 20 6 20 3 1 25 86 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 5 - U - - - ML 21 20 6 23 3 1 25 84 104 -7.870 -0.022 -6.524 -0.819 -0.459 -1.552 1.242 D 22 20 6 23 3 0 20 82 102 -7.056 -2.569 -0.279 IL 23 23 3 23 3 1 24 85 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 6 - g - - - ML 24 23 3 26 3 1 24 83 103 -7.870 -0.022 -6.524 0.220 -0.704 0.553 -0.408 D 25 23 3 26 3 0 20 81 101 -7.056 -0.676 -1.448 IL 26 26 3 26 3 1 23 84 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 7 - A - - - ML 27 26 3 29 3 1 23 81 102 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 28 26 3 29 3 0 18 80 100 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 22 83 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 8 - U - - - ML 30 29 3 32 3 1 22 80 101 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 31 29 3 32 3 0 17 79 99 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 22 82 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 9 - G - - - ML 33 32 3 35 3 1 22 79 100 -8.004 -0.020 -6.658 -1.665 -2.899 1.742 -2.286 D 34 32 3 35 3 0 16 78 98 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 21 81 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 10 - A - - - ML 36 35 3 38 3 1 21 78 98 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 37 35 3 38 3 0 15 77 97 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 20 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - U - - - ML 39 38 3 41 3 1 20 77 97 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 40 38 3 41 3 0 14 76 96 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 19 79 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - G - - - ML 42 41 3 44 3 1 19 76 96 -8.004 -0.020 -6.658 -1.665 -2.899 1.742 -2.286 D 43 41 3 44 3 0 13 75 95 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 18 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - A - - - ML 45 44 3 47 3 1 18 75 95 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 46 44 3 47 3 0 13 74 94 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 17 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - U - - - ML 48 47 3 50 3 1 18 74 94 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 49 47 3 50 3 0 12 73 93 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 17 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - U - - - ML 51 50 3 53 3 1 17 73 93 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 52 50 3 53 3 0 11 72 92 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 16 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - C - - - ML 54 53 3 56 3 1 16 72 92 -8.004 -0.020 -6.658 -1.838 1.649 -2.665 -1.232 D 55 53 3 56 3 0 10 71 91 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 15 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - U - - - ML 57 56 3 59 3 1 15 71 91 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 58 56 3 59 3 0 10 70 90 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 14 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - A - - - ML 60 59 3 62 3 1 15 70 90 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 61 59 3 62 3 0 9 69 89 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 14 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - U - - - ML 63 62 3 65 3 1 14 69 89 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 64 62 3 65 3 0 8 68 88 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 13 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - A - - - ML 66 65 3 68 3 1 13 68 88 -8.004 -0.020 -6.658 1.300 -1.576 -0.475 -1.050 D 67 65 3 68 3 0 7 66 86 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 12 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - u - - - ML 69 68 3 71 3 1 12 67 87 -8.004 -0.020 -6.658 -0.741 0.525 -1.525 0.692 D 70 68 3 71 3 0 6 65 85 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 11 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - U - - - ML 72 71 3 74 3 1 12 66 86 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 73 71 3 74 3 0 6 64 84 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 11 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - U - - - ML 75 74 3 77 3 1 11 65 85 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 76 74 3 77 3 0 5 63 83 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 10 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - G - - - ML 78 77 3 80 3 1 10 64 84 -8.004 -0.020 -6.658 -0.764 -2.239 1.526 -1.647 D 79 77 3 80 3 0 4 62 82 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 9 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - A - - - ML 81 80 3 83 3 1 10 63 82 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 82 80 3 83 3 0 4 61 81 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 8 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - U - - - ML 84 83 3 86 3 1 9 62 81 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 85 83 3 86 3 0 3 60 80 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - a - - - ML 87 86 3 89 3 1 8 61 80 -8.004 -0.020 -6.658 0.888 -1.418 0.283 -0.840 D 88 86 3 89 3 0 2 59 79 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - U - - - ML 90 89 3 92 3 1 8 60 79 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 91 89 3 92 3 0 2 58 78 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 6 62 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - U - - - ML 93 92 3 95 3 1 7 58 78 -8.004 -0.020 -6.658 -0.915 -0.388 -1.659 1.257 D 94 92 3 95 3 0 1 57 77 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 6 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - A - - - ML 96 95 3 98 3 1 6 57 77 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 97 95 3 98 3 0 0 56 76 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - C - - - ML 99 98 3 101 3 1 6 56 76 -8.004 -0.020 -6.658 -1.032 1.179 -1.853 -0.043 D 100 98 3 101 3 0 0 55 75 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - u - - - ML 102 101 3 104 3 1 5 55 75 -8.004 -0.020 -6.658 0.515 -0.859 -1.079 0.629 D 103 101 3 104 3 0 0 54 74 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 4 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - G - - - ML 105 104 3 107 3 1 5 54 74 -8.004 -0.020 -6.658 -1.665 -2.899 1.742 -2.286 D 106 104 3 107 3 0 0 53 73 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - A - - - ML 108 107 3 110 3 1 4 53 73 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 109 107 3 110 3 0 0 52 71 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - C - - - ML 111 110 3 113 3 1 4 52 72 -8.004 -0.020 -6.658 -1.838 1.649 -2.665 -1.232 D 112 110 3 113 3 0 0 51 70 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - c - - - ML 114 113 3 116 3 1 3 51 71 -8.004 -0.020 -6.658 -0.862 0.945 -1.672 0.276 D 115 113 3 116 3 0 0 50 69 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 2 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - A - - - ML 117 116 3 119 3 1 3 50 69 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 118 116 3 119 3 0 0 49 68 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - G - - - ML 120 119 3 122 3 1 2 49 68 -8.004 -0.020 -6.658 -1.665 -2.899 1.742 -2.286 D 121 119 3 122 3 0 0 48 67 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - U - - - ML 123 122 3 125 3 1 2 48 67 -8.004 -0.020 -6.658 -0.614 -1.059 -1.589 1.341 D 124 122 3 125 3 0 0 47 66 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - u - - - ML 126 125 3 128 3 1 2 47 66 -8.004 -0.020 -6.658 -0.395 -0.925 0.158 0.675 D 127 125 3 128 3 0 0 46 65 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - a - - - ML 129 128 3 131 3 1 1 46 65 -8.004 -0.020 -6.658 0.605 -1.099 0.277 -0.321 D 130 128 3 131 3 0 0 44 64 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - c - - - ML 132 131 3 134 3 1 1 45 64 -8.392 -0.018 -6.710 -0.314 0.190 0.182 -0.120 D 133 131 3 134 3 0 0 43 63 -5.620 -0.734 -1.403 IL 134 134 3 134 3 1 1 45 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 71 - G - - MR 135 134 3 137 3 1 1 44 63 -8.392 -0.018 -6.710 -1.665 -2.899 1.742 -2.286 D 136 134 3 137 3 0 0 42 61 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 44 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 70 - A - - MR 138 137 3 140 3 1 1 43 62 -8.392 -0.018 -6.710 1.736 -2.452 -2.076 -2.002 D 139 137 3 140 3 0 0 41 60 -6.390 -1.568 -0.620 IR 140 140 3 140 3 1 1 43 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 44 ] - 69 - G - - MR 141 140 3 143 3 1 1 42 61 -8.392 -0.018 -6.710 -1.665 -2.899 1.742 -2.286 D 142 140 3 143 3 0 0 40 59 -6.390 -1.568 -0.620 IR 143 143 3 143 3 1 1 42 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 45 ] - 68 - U - - MR 144 143 3 146 3 1 1 41 60 -8.392 -0.018 -6.710 -1.560 -1.543 -2.297 1.639 D 145 143 3 146 3 0 0 39 58 -6.390 -1.568 -0.620 IR 146 146 3 146 3 1 1 41 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 46 ] - 67 - c - - MR 147 146 3 149 3 1 1 40 59 -8.392 -0.018 -6.710 0.040 0.850 -1.365 -0.356 D 148 146 3 149 3 0 0 38 57 -6.390 -1.568 -0.620 IR 149 149 3 149 3 1 1 40 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 47 ] - 66 - C - - MR 150 149 3 152 5 1 1 39 58 -7.128 -0.038 -6.944 -7.156 -8.047 -1.838 1.649 -2.665 -1.232 D 151 149 3 152 5 0 0 37 57 -5.352 -0.707 -2.978 -4.409 -2.404 IR 152 152 3 152 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 43 65 u a - - MP 153 152 3 157 6 2 2 38 57 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -2.751 -2.777 -2.836 0.648 -2.302 -3.600 1.793 -2.841 -2.863 0.829 -3.369 -0.988 2.026 -3.008 1.479 -0.723 ML 154 152 3 157 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 3 157 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 3 157 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 37 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 44 64 A U - - MP 159 158 6 163 6 2 2 36 55 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -3.866 -2.878 -3.879 3.378 -4.254 -5.323 0.051 -3.916 -3.767 0.998 -4.319 -0.342 -0.366 -4.499 -1.890 -2.708 ML 160 158 6 163 6 1 1 34 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 34 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 35 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 45 63 G C - - MP 165 164 6 169 6 2 2 34 53 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -3.495 -2.496 -3.493 0.960 -3.942 -4.020 0.384 -3.949 -3.616 3.180 -3.990 0.078 0.108 -1.545 -1.519 -2.517 ML 166 164 6 169 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 33 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 46 62 c g - - MP 171 170 6 175 4 2 2 32 51 -6.991 -7.198 -0.052 -5.612 -3.280 -3.325 -3.266 0.227 0.096 -3.925 2.894 -3.086 -3.288 0.353 -3.733 -1.487 1.183 -3.491 0.542 -2.245 ML 172 170 6 175 4 1 1 32 52 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 4 1 1 32 51 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 174 170 6 175 4 0 0 31 50 -4.568 -4.250 -2.265 -0.520 IL 175 175 5 175 4 1 1 34 53 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 176 176 6 176 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 47 - U - - - ML 177 176 6 179 3 1 1 29 48 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 178 176 6 179 3 0 0 28 47 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 48 - G - - - ML 180 179 3 182 3 1 1 28 47 -8.004 -0.020 -6.658 -0.894 -2.334 1.568 -1.741 D 181 179 3 182 3 0 0 27 46 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 49 - A - - - ML 183 182 3 185 3 1 1 27 46 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 184 182 3 185 3 0 0 26 45 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 50 - A - - - ML 186 185 3 188 3 1 1 26 45 -8.004 -0.020 -6.658 1.491 -1.805 -0.994 -1.316 D 187 185 3 188 3 0 0 25 44 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 51 - G - - - ML 189 188 3 191 3 1 1 25 43 -8.004 -0.020 -6.658 -1.009 -1.958 1.467 -1.056 D 190 188 3 191 3 0 0 24 43 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 52 - A - - - ML 192 191 3 194 3 1 1 23 42 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 193 191 3 194 3 0 0 22 41 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 53 - u - - - ML 195 194 3 197 3 1 1 22 41 -8.004 -0.020 -6.658 -0.737 0.430 -1.516 0.768 D 196 194 3 197 3 0 0 21 40 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 54 - A - - - ML 198 197 3 200 3 1 1 21 40 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 199 197 3 200 3 0 0 20 39 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 55 - A - - - ML 201 200 3 203 3 1 1 20 39 -8.004 -0.020 -6.658 1.454 -1.240 -1.456 -1.081 D 202 200 3 203 3 0 0 19 38 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 56 - U - - - ML 204 203 3 206 3 1 1 19 37 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 205 203 3 206 3 0 0 18 37 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 57 - C - - - ML 207 206 3 209 3 1 1 17 36 -8.004 -0.020 -6.658 -0.769 1.324 -1.868 -0.655 D 208 206 3 209 3 0 0 17 36 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 58 - G - - - ML 210 209 3 212 3 1 1 16 35 -8.004 -0.020 -6.658 -1.665 -2.899 1.742 -2.286 D 211 209 3 212 3 0 0 16 34 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 59 - C - - - ML 213 212 3 215 3 1 1 15 33 -8.004 -0.020 -6.658 -1.838 1.649 -2.665 -1.232 D 214 212 3 215 3 0 0 15 33 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 60 - a - - - ML 216 215 3 218 3 1 1 13 31 -8.004 -0.020 -6.658 0.753 0.118 -1.124 -0.376 D 217 215 3 218 3 0 0 13 32 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 61 - U - - - ML 219 218 3 221 2 1 1 1 1 * 0.000 -1.560 -1.543 -2.297 1.639 D 220 218 3 221 2 0 0 0 0 * 0.000 IL 221 221 3 221 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 67 ] - - - - - - E 222 221 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME snoR43 ACC RF00316 DESC Small nucleolar RNA R43 LENG 73 MAXL 160 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 02:45:32 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00316/CM NSEQ 16 EFFN 2.324219 CKSUM 1973902349 STATS LOCAL MSV -8.3402 0.71877 STATS LOCAL VITERBI -9.1701 0.71877 STATS LOCAL FORWARD -3.2993 0.71877 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.25345 1.66516 1.49092 1.20345 1.38629 1.38629 1.38629 1.38629 0.22985 3.92614 1.68401 1.46634 0.26236 0.00000 * 1 0.52320 2.36504 1.53772 2.31708 1 A - - < 1.38629 1.38629 1.38629 1.38629 0.04844 3.74473 3.74473 1.46634 0.26236 0.92254 0.50668 2 2.46073 3.03192 0.20387 2.97915 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.04462 3.82504 3.82504 1.46634 0.26236 2.06388 0.13577 3 1.01075 1.34225 1.57475 1.78535 3 a - - < 1.38629 1.38629 1.38629 1.38629 0.10047 2.60685 3.82504 0.51336 0.91250 2.06388 0.13577 4 2.02228 1.72501 2.53431 0.49403 5 U - - - 1.38629 1.38629 1.38629 1.38629 0.04462 3.82504 3.82504 1.46634 0.26236 2.06388 0.13577 5 1.24339 1.88848 0.97047 1.70711 6 g - - - 1.38629 1.38629 1.38629 1.38629 0.04462 3.82504 3.82504 1.46634 0.26236 0.29292 1.37073 6 0.15632 3.23115 2.95602 2.93417 7 A - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 7 2.60231 2.56758 3.11941 0.21692 8 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 8 2.69194 3.56866 0.14971 3.14418 9 G - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 9 0.15632 3.23115 2.95602 2.93417 10 A - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 10 2.60231 2.56758 3.11941 0.21692 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 11 2.69194 3.56866 0.14971 3.14418 12 G - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 12 0.15632 3.23115 2.95602 2.93417 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 13 2.60231 2.56758 3.11941 0.21692 14 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 14 2.60231 2.56758 3.11941 0.21692 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 15 2.83645 0.20339 3.41241 2.38118 16 C - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 16 2.60231 2.56758 3.11941 0.21692 17 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 17 0.15632 3.23115 2.95602 2.93417 18 A - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 18 2.60231 2.56758 3.11941 0.21692 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 19 0.45828 2.55291 1.72355 2.19515 20 A - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 20 1.95969 0.99435 2.51114 0.89659 21 u - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 21 2.60231 2.56758 3.11941 0.21692 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 22 2.60231 2.56758 3.11941 0.21692 23 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 23 1.98501 3.05420 0.29465 2.64972 24 G - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 24 0.15632 3.23115 2.95602 2.93417 25 A - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 25 2.60231 2.56758 3.11941 0.21692 26 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 26 0.75049 2.43483 1.17154 2.03743 27 a - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 27 2.60231 2.56758 3.11941 0.21692 28 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 28 2.09575 1.67088 2.61496 0.48488 29 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 29 0.15632 3.23115 2.95602 2.93417 30 A - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 30 2.18994 0.52819 2.76895 1.44529 31 C - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 31 1.01920 2.01760 2.17190 0.93603 32 u - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 32 2.69194 3.56866 0.14971 3.14418 33 G - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 33 0.15632 3.23115 2.95602 2.93417 34 A - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 34 2.83645 0.20339 3.41241 2.38118 35 C - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 35 2.05572 0.69357 2.62664 1.20434 36 c - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 36 0.15632 3.23115 2.95602 2.93417 37 A - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 37 2.69194 3.56866 0.14971 3.14418 38 G - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 38 1.86515 2.18621 2.56874 0.42136 39 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 39 1.69802 2.06734 1.25938 0.89992 40 u - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 40 0.95853 2.18564 1.17571 1.63199 41 a - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 41 1.64042 1.23357 1.23557 1.49530 42 c - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 42 2.10448 1.44468 1.90078 0.70761 43 u - - < 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 43 0.34542 2.76190 1.82455 2.69391 44 A - - < 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 44 1.96435 2.44292 0.42104 2.14999 45 G - - < 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 45 2.42269 0.58453 2.23747 1.39747 46 C - - < 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 46 2.60231 2.56758 3.11941 0.21692 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 47 2.08489 3.12733 0.26649 2.72144 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 48 0.15632 3.23115 2.95602 2.93417 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 49 0.32503 2.72496 2.11201 2.39745 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 50 2.18114 2.84757 0.33224 2.19115 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 51 0.15632 3.23115 2.95602 2.93417 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 52 1.95645 1.06316 2.50354 0.84053 53 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 53 0.15632 3.23115 2.95602 2.93417 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 54 0.34868 2.28787 2.47310 2.22029 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 55 2.60231 2.56758 3.11941 0.21692 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 56 1.99514 0.42066 2.79416 1.92259 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 57 2.69194 3.56866 0.14971 3.14418 58 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 58 2.83645 0.20339 3.41241 2.38118 59 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 59 0.84452 1.28544 2.21443 1.69016 60 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 60 2.60231 2.56758 3.11941 0.21692 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 61 1.50410 2.40534 0.54915 2.20627 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 62 2.55494 0.47911 2.25691 1.61800 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 63 2.92719 2.11841 2.57621 0.28746 64 U - - > 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 64 1.23632 2.06905 0.89014 1.75653 65 g - - > 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 65 2.83645 0.20339 3.41241 2.38118 66 C - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 66 1.37312 0.75578 2.40036 1.68012 67 c - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 67 2.60231 2.56758 3.11941 0.21692 68 U - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 68 2.69194 3.56866 0.14971 3.14418 69 G - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 69 0.15632 3.23115 2.95602 2.93417 70 A - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 70 2.69194 3.56866 0.14971 3.14418 71 G - - - 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 71 2.00661 1.78960 1.68773 0.66633 72 U - - > 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 72 3.05880 0.25758 2.82373 2.11401 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.04024 3.92614 3.92614 1.46634 0.26236 1.09861 0.40547 73 2.47986 1.79908 2.18543 0.44885 74 U - - > 1.38629 1.38629 1.38629 1.38629 0.02032 3.90622 * 1.46634 0.26236 0.00000 * //