INFERNAL1/a [1.1.5 | Sep 2023] NAME snoTBR7 ACC RF00295 DESC Small nucleolar RNA TBR7 STATES 229 NODES 74 CLEN 75 W 92 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 02:27:29 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00295/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 10 EFFN 2.299805 CKSUM 1188249144 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 49.00 NC 38.50 EFP7GF -8.8171 0.71863 ECMLC 0.62850 -9.25948 0.30552 1600000 489769 0.002450 ECMGC 0.38755 -18.26970 -4.31823 1600000 89174 0.004486 ECMLI 0.55381 -8.63305 1.58089 1600000 343385 0.003495 ECMGI 0.37023 -14.35086 -0.89257 1600000 58342 0.006856 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 92 112 -7.092 -7.299 -0.048 -5.713 IL 1 1 2 1 4 2 34 96 116 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 33 95 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 2 33 92 112 -8.099 -0.019 -6.753 -0.316 0.075 -0.018 0.209 D 4 2 3 5 3 0 28 91 111 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 32 94 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 2 32 91 111 -8.099 -0.019 -6.753 1.241 -1.603 -0.270 -1.068 D 7 5 3 8 3 0 28 90 110 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 32 93 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - u - - - ML 9 8 3 11 3 2 31 90 110 -8.099 -0.019 -6.753 -0.052 -0.297 -0.188 0.426 D 10 8 3 11 3 0 27 89 109 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 31 92 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 30 89 109 -8.099 -0.114 -3.792 1.772 -2.644 -2.249 -2.214 D 13 11 3 14 3 0 26 88 108 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 30 91 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 1 30 88 108 -8.005 -0.020 -6.659 -1.561 -1.545 -2.299 1.639 D 16 14 3 17 3 0 25 87 107 -6.887 -0.788 -1.278 IL 17 17 3 17 3 1 29 90 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 1 29 87 107 -8.099 -0.019 -6.753 -1.866 -3.128 1.781 -2.516 D 19 17 3 20 3 0 24 86 105 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 28 89 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 29 86 106 -8.099 -0.019 -6.753 1.772 -2.644 -2.249 -2.214 D 22 20 3 23 3 0 23 84 104 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 28 88 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 1 28 85 105 -8.099 -0.019 -6.753 -1.738 -1.691 -2.484 1.683 D 25 23 3 26 3 0 22 83 103 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 27 87 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 1 27 84 104 -8.099 -0.019 -6.753 -1.866 -3.128 1.781 -2.516 D 28 26 3 29 3 0 21 82 102 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 26 86 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 30 29 3 32 3 1 26 83 102 -8.099 -0.019 -6.753 1.772 -2.644 -2.249 -2.214 D 31 29 3 32 3 0 21 81 101 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 25 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 33 32 3 35 3 1 26 82 101 -8.099 -0.019 -6.753 -0.946 -0.219 -1.700 1.210 D 34 32 3 35 3 0 20 80 100 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 25 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 36 35 3 38 3 1 25 81 100 -8.099 -0.019 -6.753 -1.738 -1.691 -2.484 1.683 D 37 35 3 38 3 0 19 79 99 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 24 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - G - - - ML 39 38 3 41 3 1 24 80 99 -8.099 -0.019 -6.753 -1.866 -3.128 1.781 -2.516 D 40 38 3 41 3 0 18 78 98 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 23 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 42 41 3 44 3 1 23 79 98 -4.069 -0.103 -6.753 1.772 -2.644 -2.249 -2.214 D 43 41 3 44 3 0 18 77 96 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 22 80 99 -1.634 -0.671 -4.334 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - C - - - ML 45 44 3 47 3 1 23 77 97 -8.099 -0.019 -6.753 -2.071 1.702 -2.902 -1.419 D 46 44 3 47 3 0 17 76 95 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 21 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - u - - - ML 48 47 3 50 3 1 22 76 96 -1.857 -0.485 -6.753 0.151 -0.886 0.082 0.368 D 49 47 3 50 3 0 16 74 93 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 21 76 96 -1.847 -0.533 -5.019 0.000 0.000 0.000 0.000 [ MATL 17 ] 20 - u - - - ML 51 50 3 53 3 1 21 74 94 -8.099 -0.019 -6.753 0.184 -0.916 -1.232 0.932 D 52 50 3 53 3 0 15 73 93 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 20 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 21 - A - - - ML 54 53 3 56 3 1 20 73 93 -8.099 -0.019 -6.753 1.772 -2.644 -2.249 -2.214 D 55 53 3 56 3 0 15 72 91 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 19 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 22 - A - - - ML 57 56 3 59 3 1 20 72 92 -8.099 -0.019 -6.753 1.772 -2.644 -2.249 -2.214 D 58 56 3 59 3 0 14 71 90 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 18 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 23 - C - - - ML 60 59 3 62 3 1 19 71 90 -8.099 -0.019 -6.753 -2.071 1.702 -2.902 -1.419 D 61 59 3 62 3 0 13 70 89 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 18 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 24 - A - - - ML 63 62 3 65 3 1 18 70 89 -8.099 -0.019 -6.753 1.772 -2.644 -2.249 -2.214 D 64 62 3 65 3 0 12 69 88 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 17 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 25 - U - - - ML 66 65 3 68 3 1 17 69 88 -8.099 -0.019 -6.753 -1.738 -1.691 -2.484 1.683 D 67 65 3 68 3 0 12 68 87 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 16 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 26 - C - - - ML 69 68 3 71 3 1 17 68 87 -8.099 -0.019 -6.753 -2.071 1.702 -2.902 -1.419 D 70 68 3 71 3 0 11 67 86 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 16 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 27 - A - - - ML 72 71 3 74 3 1 16 67 86 -8.099 -0.019 -6.753 1.772 -2.644 -2.249 -2.214 D 73 71 3 74 3 0 10 66 85 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 15 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 28 - C - - - ML 75 74 3 77 3 1 15 66 85 -8.099 -0.019 -6.753 -2.071 1.702 -2.902 -1.419 D 76 74 3 77 3 0 10 65 84 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 14 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 29 - A - - - ML 78 77 3 80 3 1 14 65 84 -8.099 -0.019 -6.753 1.772 -2.644 -2.249 -2.214 D 79 77 3 80 3 0 9 63 83 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 13 67 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 30 - G - - - ML 81 80 3 83 3 1 14 64 83 -8.099 -0.019 -6.753 -1.866 -3.128 1.781 -2.516 D 82 80 3 83 3 0 8 62 82 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 13 66 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 31 - A - - - ML 84 83 3 86 3 1 13 63 82 -8.099 -0.019 -6.753 1.505 -1.881 -0.964 -1.402 D 85 83 3 86 3 0 8 61 81 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 12 65 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 32 - C - - - ML 87 86 3 89 3 1 12 62 80 -8.099 -0.019 -6.753 -2.071 1.702 -2.902 -1.419 D 88 86 3 89 3 0 7 60 79 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 11 64 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 33 - U - - - ML 90 89 3 92 3 1 11 60 79 -8.099 -0.019 -6.753 -1.738 -1.691 -2.484 1.683 D 91 89 3 92 3 0 6 59 78 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 11 63 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 34 - U - - - ML 93 92 3 95 3 1 11 59 78 -8.099 -0.019 -6.753 -1.738 -1.691 -2.484 1.683 D 94 92 3 95 3 0 5 58 77 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 10 62 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 35 - U - - - ML 96 95 3 98 3 1 10 58 77 -8.099 -0.019 -6.753 -1.738 -1.691 -2.484 1.683 D 97 95 3 98 3 0 5 57 76 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 9 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 36 - G - - - ML 99 98 3 101 3 1 9 57 76 -8.481 -0.017 -6.798 -1.866 -3.128 1.781 -2.516 D 100 98 3 101 3 0 4 56 75 -5.620 -0.734 -1.403 IL 101 101 3 101 3 1 8 58 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 80 - u - - MR 102 101 3 104 3 1 8 56 75 -8.481 -0.017 -6.798 -0.467 -0.962 0.012 0.812 D 103 101 3 104 3 0 2 55 73 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 7 57 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 79 - u - - MR 105 104 3 107 3 1 8 55 74 -8.481 -0.017 -6.798 -0.069 -0.197 0.050 0.188 D 106 104 3 107 3 0 1 54 72 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 6 56 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 78 - c - - MR 108 107 3 110 3 1 7 54 73 -8.481 -0.017 -6.798 -0.324 0.762 -1.398 0.171 D 109 107 3 110 3 0 1 53 71 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 5 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 77 - A - - MR 111 110 3 113 3 1 6 53 72 -8.481 -0.017 -6.798 1.772 -2.644 -2.249 -2.214 D 112 110 3 113 3 0 1 52 70 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 5 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 76 - G - - MR 114 113 3 116 3 1 6 52 71 -8.481 -0.017 -6.798 -1.866 -3.128 1.781 -2.516 D 115 113 3 116 3 0 1 51 69 -6.390 -1.568 -0.620 IR 116 116 3 116 3 1 4 53 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 75 - U - - MR 117 116 3 119 3 1 5 51 70 -8.481 -0.017 -6.798 -1.738 -1.691 -2.484 1.683 D 118 116 3 119 3 0 0 50 68 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 3 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 74 - C - - MR 120 119 3 122 3 1 4 50 69 -8.481 -0.017 -6.798 -2.071 1.702 -2.902 -1.419 D 121 119 3 122 3 0 0 49 67 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 3 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 73 - U - - MR 123 122 3 125 3 1 4 49 68 -8.481 -0.017 -6.798 -0.108 -0.972 -1.370 1.121 D 124 122 3 125 3 0 0 48 66 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 2 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 72 - G - - MR 126 125 3 128 3 1 3 48 67 -8.481 -0.017 -6.798 -1.866 -3.128 1.781 -2.516 D 127 125 3 128 3 0 0 47 65 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 2 49 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 71 - A - - MR 129 128 3 131 3 1 3 47 66 -8.481 -0.017 -6.798 1.772 -2.644 -2.249 -2.214 D 130 128 3 131 3 0 0 46 64 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 2 48 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 44 ] - 70 - C - - MR 132 131 3 134 3 1 3 46 65 -8.481 -0.017 -6.798 -2.071 1.702 -2.902 -1.419 D 133 131 3 134 3 0 0 44 63 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 47 66 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 45 ] - 69 - C - - MR 135 134 3 137 3 1 2 45 64 -8.481 -0.017 -6.798 -2.071 1.702 -2.902 -1.419 D 136 134 3 137 3 0 0 43 62 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 46 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 46 ] - 68 - C - - MR 138 137 3 140 3 1 1 44 63 -4.175 -0.190 -3.875 -0.491 1.031 -1.584 -0.134 D 139 137 3 140 3 0 0 42 61 -6.390 -1.568 -0.620 IR 140 140 3 140 3 1 1 45 64 -1.609 -0.663 -4.623 0.000 0.000 0.000 0.000 [ MATR 47 ] - 65 - C - - MR 141 140 3 143 3 1 2 43 61 -8.393 -0.018 -6.710 -0.888 1.223 -1.169 -0.557 D 142 140 3 143 3 0 0 41 60 -7.011 -2.189 -0.372 IR 143 143 3 143 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 48 ] - 64 - G - - MR 144 143 3 146 3 1 1 42 60 -8.393 -0.018 -6.710 -1.668 -2.901 1.743 -2.288 D 145 143 3 146 3 0 0 40 59 -7.011 -0.813 -1.241 IR 146 146 3 146 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 49 ] - 63 - c - - MR 147 146 3 149 3 1 1 41 59 -8.481 -0.017 -6.798 -0.682 0.956 -1.017 -0.086 D 148 146 3 149 3 0 0 39 58 -6.390 -1.568 -0.620 IR 149 149 3 149 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 50 ] - 62 - U - - MR 150 149 3 152 3 1 1 40 58 -8.481 -0.017 -6.798 -1.738 -1.691 -2.484 1.683 D 151 149 3 152 3 0 0 38 57 -6.390 -1.568 -0.620 IR 152 152 3 152 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 51 ] - 61 - G - - MR 153 152 3 155 3 1 1 39 57 -8.481 -0.017 -6.798 -1.866 -3.128 1.781 -2.516 D 154 152 3 155 3 0 0 37 56 -6.390 -1.568 -0.620 IR 155 155 3 155 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 52 ] - 60 - U - - MR 156 155 3 158 3 1 1 38 56 -8.481 -0.017 -6.798 -1.738 -1.691 -2.484 1.683 D 157 155 3 158 3 0 0 36 55 -6.390 -1.568 -0.620 IR 158 158 3 158 3 1 1 38 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 53 ] - 59 - a - - MR 159 158 3 161 3 1 1 37 55 -8.481 -0.017 -6.798 0.374 0.105 -1.082 0.210 D 160 158 3 161 3 0 0 35 54 -6.390 -1.568 -0.620 IR 161 161 3 161 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 54 ] - 58 - a - - MR 162 161 3 164 3 1 1 36 54 -8.481 -0.017 -6.798 0.871 0.017 -1.189 -0.472 D 163 161 3 164 3 0 0 34 53 -6.390 -1.568 -0.620 IR 164 164 3 164 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 55 ] - 57 - c - - MR 165 164 3 167 3 1 1 35 53 -8.481 -0.017 -6.798 -0.091 0.984 -1.518 -0.447 D 166 164 3 167 3 0 0 33 52 -6.390 -1.568 -0.620 IR 167 167 3 167 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 56 ] - 56 - A - - MR 168 167 3 170 3 1 1 34 52 -8.481 -0.017 -6.798 1.490 -1.858 -0.917 -1.375 D 169 167 3 170 3 0 0 32 51 -6.390 -1.568 -0.620 IR 170 170 3 170 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 57 ] - 55 - A - - MR 171 170 3 173 3 1 1 33 51 -8.481 -0.017 -6.798 1.505 -1.881 -0.964 -1.402 D 172 170 3 173 3 0 0 31 50 -6.390 -1.568 -0.620 IR 173 173 3 173 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 58 ] - 54 - a - - MR 174 173 3 176 3 1 1 31 50 -8.481 -0.017 -6.798 0.871 0.017 -1.189 -0.472 D 175 173 3 176 3 0 0 30 49 -6.390 -1.568 -0.620 IR 176 176 3 176 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 59 ] - 53 - G - - MR 177 176 3 179 3 1 1 30 49 -8.481 -0.017 -6.798 -1.866 -3.128 1.781 -2.516 D 178 176 3 179 3 0 0 29 48 -6.390 -1.568 -0.620 IR 179 179 3 179 3 1 1 31 50 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 60 ] - 52 - A - - MR 180 179 3 182 3 1 1 29 48 -8.481 -0.100 -3.963 1.772 -2.644 -2.249 -2.214 D 181 179 3 182 3 0 0 28 47 -6.390 -1.568 -0.620 IR 182 182 3 182 3 1 1 30 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 61 ] - 51 - a - - MR 183 182 3 185 3 1 1 29 47 -8.399 -0.018 -6.717 0.930 -0.995 -1.106 0.175 D 184 182 3 185 3 0 0 27 45 -6.976 -2.154 -0.382 IR 185 185 3 185 3 1 1 29 48 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 62 ] - 50 - a - - MR 186 185 3 188 3 1 1 28 46 -8.399 -0.018 -6.717 0.492 0.436 -1.177 -0.324 D 187 185 3 188 3 0 0 26 45 -6.976 -0.840 -1.206 IR 188 188 3 188 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 63 ] - 49 - G - - MR 189 188 3 191 3 1 1 27 45 -8.481 -0.017 -6.798 -0.021 -1.833 1.210 -1.249 D 190 188 3 191 3 0 0 25 44 -6.390 -1.568 -0.620 IR 191 191 3 191 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 64 ] - 48 - A - - MR 192 191 3 194 3 1 1 25 44 -8.481 -0.017 -6.798 1.029 -1.089 -1.186 0.070 D 193 191 3 194 3 0 0 24 43 -6.390 -1.568 -0.620 IR 194 194 3 194 3 1 1 26 45 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 65 ] - 47 - G - - MR 195 194 3 197 5 1 1 24 43 -7.211 -0.036 -7.027 -7.239 -8.131 0.180 -1.722 1.077 -1.136 D 196 194 3 197 5 0 0 23 42 -5.352 -0.707 -2.978 -4.409 -2.404 IR 197 197 3 197 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 66 ] 37 46 a u - - MP 198 197 3 202 6 2 2 23 42 -9.164 -9.104 -0.020 -7.880 -8.160 -8.555 -2.860 -2.492 0.495 2.767 -3.069 -3.951 0.706 -3.207 -3.004 1.251 -3.546 -0.385 0.427 -3.211 -1.021 -2.045 ML 199 197 3 202 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 200 197 3 202 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 201 197 3 202 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 202 202 5 202 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 203 203 6 203 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 67 ] 38 45 c g - - MP 204 203 6 208 6 2 2 21 40 -9.164 -9.104 -0.020 -7.880 -8.160 -8.555 -2.518 -2.459 -2.646 0.919 -2.337 -3.459 2.089 -2.779 -1.149 1.693 -3.215 -0.639 1.655 -2.776 -0.200 -1.715 ML 205 203 6 208 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 206 203 6 208 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 207 203 6 208 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 208 208 5 208 6 1 1 21 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 209 209 6 209 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 68 ] 39 44 g c - - MP 210 209 6 214 4 2 2 19 38 -7.092 -7.299 -0.325 -2.412 -3.349 -2.758 -3.347 0.805 -3.070 -4.039 1.248 -3.451 -3.428 2.633 -3.860 -0.581 0.788 -3.433 1.142 -2.310 ML 211 209 6 214 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 212 209 6 214 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 213 209 6 214 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 214 214 5 214 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 215 215 6 215 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 40 - A - - - ML 216 215 6 218 3 1 1 16 35 -7.851 -0.022 -6.505 1.232 -0.789 -1.165 -0.675 D 217 215 6 218 3 0 0 15 33 -7.553 -3.066 -0.192 IL 218 218 3 218 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 41 - a - - - ML 219 218 3 221 3 1 1 15 33 -7.851 -0.022 -6.505 0.472 -0.217 -0.175 -0.206 D 220 218 3 221 3 0 0 14 32 -7.553 -3.066 -0.192 IL 221 221 3 221 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 42 - C - - - ML 222 221 3 224 3 1 1 13 32 -7.851 -0.128 -3.633 -1.470 1.542 -2.283 -0.939 D 223 221 3 224 3 0 0 12 31 -7.553 -0.444 -1.945 IL 224 224 3 224 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 43 - C - - - ML 225 224 3 227 2 1 1 1 1 * 0.000 -1.857 1.654 -2.684 -1.247 D 226 224 3 227 2 0 0 0 0 * 0.000 IL 227 227 3 227 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 73 ] - - - - - - E 228 227 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME snoTBR7 ACC RF00295 DESC Small nucleolar RNA TBR7 LENG 75 MAXL 161 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 02:27:29 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00295/CM NSEQ 10 EFFN 2.475586 CKSUM 1188249144 STATS LOCAL MSV -8.7400 0.71863 STATS LOCAL VITERBI -9.3408 0.71863 STATS LOCAL FORWARD -3.3571 0.71863 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.19235 1.47641 1.49953 1.40731 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 0.00000 * 1 1.62207 1.32537 1.38999 1.24574 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 2 0.51142 2.53938 1.57243 2.17243 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 3 1.42900 1.59173 1.51129 1.08989 3 u - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 4 0.14458 3.30327 3.02111 3.01376 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.11051 3.99766 2.45035 1.46634 0.26236 1.09861 0.40547 5 2.54220 2.51776 3.05674 0.23114 5 U - - : 1.38629 1.38629 1.38629 1.38629 0.04019 3.92734 3.92734 1.46634 0.26236 0.35462 1.20878 6 2.76586 3.65257 0.13752 3.22788 6 G - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 7 0.14458 3.30327 3.02111 3.01376 7 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 8 2.67010 2.62387 3.18988 0.20205 8 U - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 9 2.76586 3.65257 0.13752 3.22788 9 G - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 10 0.14458 3.30327 3.02111 3.01376 10 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 11 2.08312 1.54086 2.60857 0.53167 11 U - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 12 2.67010 2.62387 3.18988 0.20205 12 U - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 13 2.76586 3.65257 0.13752 3.22788 13 G - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 14 0.14458 3.30327 3.02111 3.01376 14 A - - : 1.38629 1.38629 1.38629 1.38629 0.10210 2.54205 3.99766 0.41510 1.07962 1.09861 0.40547 15 2.92395 0.18641 3.50027 2.45160 16 C - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 16 1.28438 2.01727 1.32130 1.12896 17 u - - : 1.38629 1.38629 1.38629 1.38629 0.40136 1.16400 3.99766 0.27638 1.42097 1.09861 0.40547 17 1.26020 2.04596 2.26620 0.72683 20 u - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 18 0.14458 3.30327 3.02111 3.01376 21 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 19 0.14458 3.30327 3.02111 3.01376 22 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 20 2.92395 0.18641 3.50027 2.45160 23 C - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 21 0.14458 3.30327 3.02111 3.01376 24 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 22 2.67010 2.62387 3.18988 0.20205 25 U - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 23 2.92395 0.18641 3.50027 2.45160 26 C - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 24 0.14458 3.30327 3.02111 3.01376 27 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 25 2.92395 0.18641 3.50027 2.45160 28 C - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 26 0.14458 3.30327 3.02111 3.01376 29 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 27 2.76586 3.65257 0.13752 3.22788 30 G - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 28 0.32835 2.74038 2.07203 2.41445 31 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 29 2.92395 0.18641 3.50027 2.45160 32 C - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 30 2.67010 2.62387 3.18988 0.20205 33 U - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 31 2.67010 2.62387 3.18988 0.20205 34 U - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 32 2.67010 2.62387 3.18988 0.20205 35 U - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 33 2.76586 3.65257 0.13752 3.22788 36 G - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 34 0.59553 2.16663 1.59304 2.03362 37 A - - < 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 35 1.89541 1.22425 1.28656 1.27458 38 c - - < 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 36 2.04388 1.83290 0.80819 1.32854 39 g - - < 1.38629 1.38629 1.38629 1.38629 0.23190 3.99766 1.66804 1.46634 0.26236 1.09861 0.40547 37 0.51574 1.94420 2.22410 1.88604 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04526 3.81102 3.81102 1.46634 0.26236 2.50749 0.08498 38 1.05587 1.53256 1.50356 1.54276 41 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04526 3.81102 3.81102 1.46634 0.26236 2.50749 0.08498 39 2.48864 0.29049 3.05596 2.10370 42 C - - _ 1.38629 1.38629 1.38629 1.38629 0.12841 3.81102 2.31892 1.46634 0.26236 0.17787 1.81434 40 2.76998 0.21744 3.34514 2.32788 43 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03999 3.93230 3.93230 1.46634 0.26236 0.37143 1.17038 41 2.08490 0.88326 1.21769 1.79374 44 c - - > 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 42 1.38326 1.48242 1.08592 1.68977 45 g - - > 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 43 2.26494 1.80541 1.48674 0.68191 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 44 1.26606 2.62443 0.62158 2.22114 47 G - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 45 0.66004 2.16597 2.23483 1.34124 48 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 46 1.41091 2.70432 0.52904 2.30267 49 G - - : 1.38629 1.38629 1.38629 1.38629 0.10535 3.99766 2.50556 1.46634 0.26236 1.09861 0.40547 47 1.04008 1.06788 2.22999 1.63318 50 a - - : 1.38629 1.38629 1.38629 1.38629 0.03999 3.93230 3.93230 1.46634 0.26236 1.86353 0.16857 48 0.73021 2.09720 2.17609 1.26617 51 a - - : 1.38629 1.38629 1.38629 1.38629 0.03999 3.93230 3.93230 1.46634 0.26236 0.37143 1.17038 49 0.14458 3.30327 3.02111 3.01376 52 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 50 2.76586 3.65257 0.13752 3.22788 53 G - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 51 0.76981 1.36593 2.24057 1.74092 54 a - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 52 0.32835 2.74038 2.07203 2.41445 55 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 53 0.33841 2.72374 2.03782 2.39522 56 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 54 1.46158 0.67994 2.48219 1.72641 57 C - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 55 0.76981 1.36593 2.24057 1.74092 58 a - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 56 1.12402 1.30442 2.15592 1.24513 59 a - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 57 2.67010 2.62387 3.18988 0.20205 60 U - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 58 2.76586 3.65257 0.13752 3.22788 61 G - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 59 2.67010 2.62387 3.18988 0.20205 62 U - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 60 1.89321 0.70101 2.10845 1.46143 63 c - - : 1.38629 1.38629 1.38629 1.38629 0.11051 3.99766 2.45035 1.46634 0.26236 1.09861 0.40547 61 2.62525 3.49256 0.16176 3.06805 64 G - - : 1.38629 1.38629 1.38629 1.38629 0.04019 3.92734 3.92734 1.46634 0.26236 1.90193 0.16167 62 2.05481 0.50910 2.22665 1.81428 65 C - - : 1.38629 1.38629 1.38629 1.38629 0.10996 2.47173 3.92734 0.85873 0.55113 0.35462 1.20878 63 1.75040 0.64976 2.52562 1.49560 68 C - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 64 2.92395 0.18641 3.50027 2.45160 69 C - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 65 2.92395 0.18641 3.50027 2.45160 70 C - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 66 0.14458 3.30327 3.02111 3.01376 71 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 67 2.76586 3.65257 0.13752 3.22788 72 G - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 68 1.47113 2.08941 2.36831 0.59251 73 U - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 69 2.92395 0.18641 3.50027 2.45160 74 C - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 70 2.67010 2.62387 3.18988 0.20205 75 U - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 71 2.76586 3.65257 0.13752 3.22788 76 G - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 72 0.14458 3.30327 3.02111 3.01376 77 A - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 73 1.62739 0.83927 2.38724 1.27423 78 c - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 74 1.44274 1.51924 1.34225 1.26024 79 u - - : 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 75 1.73383 2.07754 1.37139 0.81103 80 u - - : 1.38629 1.38629 1.38629 1.38629 0.01888 3.97913 * 1.46634 0.26236 0.00000 * //