INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD45 ACC RF00279 DESC Small nucleolar RNA SNORD45 STATES 220 NODES 70 CLEN 72 W 161 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 02:22:54 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00279/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 11 EFFN 2.650635 CKSUM 68659210 NULL 0.000 0.000 0.000 0.000 GA 42.00 TC 42.10 NC 41.90 EFP7GF -9.3416 0.71877 ECMLC 0.62486 -5.87502 3.09703 1600000 326565 0.003675 ECMGC 0.36803 -15.52117 -0.43621 1600000 103076 0.003881 ECMLI 0.60793 -4.00373 4.72525 1600000 241997 0.004959 ECMGI 0.40665 -9.84750 2.91579 1600000 71799 0.005571 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 161 273 -7.113 -8.358 -0.551 -1.702 IL 1 1 2 1 4 1 27 162 275 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 28 163 275 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 84 - U - - MR 3 2 3 5 3 1 28 161 274 -8.158 -0.021 -6.476 -0.442 -0.777 -0.665 1.036 D 4 2 3 5 3 0 23 160 272 -8.215 -0.511 -1.761 IR 5 5 3 5 3 1 27 162 274 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 83 - U - - MR 6 5 3 8 5 1 28 160 273 -7.259 -0.035 -7.075 -7.287 -8.178 -0.618 -1.012 -0.424 1.075 D 7 5 3 8 5 0 20 158 270 -5.640 -0.995 -3.267 -4.698 -1.574 IR 8 8 3 8 5 1 25 160 273 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 82 G C - - MP 9 8 3 13 6 2 28 159 272 -9.188 -9.127 -0.020 -7.904 -8.183 -8.579 -4.072 -2.744 -4.097 0.752 -4.864 -4.654 -0.264 -4.462 -3.991 3.238 -4.391 1.300 -0.539 -4.072 -2.245 -2.980 ML 10 8 3 13 6 1 23 157 270 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 22 157 269 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 18 153 265 -9.484 -8.183 -3.980 -4.662 -4.679 -0.229 IL 13 13 5 13 6 1 24 159 271 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 25 158 271 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 81 G C - - MP 15 14 6 19 6 2 26 158 270 -9.188 -9.127 -0.020 -7.904 -8.183 -8.579 -4.427 -2.928 -4.467 0.485 -5.233 -4.689 -0.546 -4.855 -4.225 3.494 -4.583 0.432 -0.830 -4.258 -2.557 -3.359 ML 16 14 6 19 6 1 22 155 268 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 21 155 267 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 18 152 264 -9.484 -8.183 -3.980 -4.662 -1.739 -0.755 IL 19 19 5 19 6 1 23 157 269 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 23 156 269 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 80 u a - - MP 21 20 6 25 6 2 25 156 268 -9.188 -9.127 -0.020 -7.904 -8.183 -8.579 -3.048 -3.074 -3.133 0.367 -2.591 -3.901 1.517 -3.131 -3.156 0.542 -3.665 -1.274 2.824 -3.305 0.157 -0.341 ML 22 20 6 25 6 1 21 154 266 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 19 153 265 -7.299 -6.028 -1.936 -6.006 -0.626 -4.219 0.871 -0.746 -0.477 -0.224 D 24 20 6 25 6 0 17 151 263 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 22 155 267 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 22 155 267 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 79 c g - - MP 27 26 6 31 4 2 23 154 266 -7.150 -7.357 -0.046 -5.771 -2.866 -2.954 -2.942 0.429 -0.625 -3.686 2.831 -0.246 -2.971 0.494 -3.469 -1.240 1.196 -3.130 -0.208 -2.000 ML 28 26 6 31 4 1 20 152 265 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 18 151 263 -5.162 -4.191 -2.059 -0.562 0.121 -0.756 0.551 -0.226 D 30 26 6 31 4 0 17 150 262 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 22 153 266 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 21 153 265 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - A - - - ML 33 32 6 35 3 1 21 152 264 -8.153 -0.018 -6.807 1.790 -2.754 -2.348 -2.335 D 34 32 6 35 3 0 16 149 261 -6.728 -2.241 -0.360 IL 35 35 3 35 3 1 20 152 264 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 6 - A - - - ML 36 35 3 38 3 1 20 151 263 -8.153 -0.018 -6.807 1.479 -1.875 -0.837 -1.393 D 37 35 3 38 3 0 15 148 260 -6.728 -2.241 -0.360 IL 38 38 3 38 3 1 20 151 263 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 7 - U - - - ML 39 38 3 41 3 1 19 150 262 -8.153 -0.152 -3.378 -0.413 -1.093 -1.575 1.290 D 40 38 3 41 3 0 15 147 259 -6.728 -2.241 -0.360 IL 41 41 3 41 3 1 20 150 263 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 8 - G - - - ML 42 41 3 44 3 1 20 149 261 -8.021 -0.020 -6.675 -1.702 -2.940 1.750 -2.328 D 43 41 3 44 3 0 14 146 259 -7.430 -0.957 -1.062 IL 44 44 3 44 3 1 19 149 262 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 9 - A - - - ML 45 44 3 47 3 1 20 148 260 -8.153 -0.018 -6.807 1.790 -2.754 -2.348 -2.335 D 46 44 3 47 3 0 13 144 257 -6.728 -2.241 -0.360 IL 47 47 3 47 3 1 18 148 261 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 10 - U - - - ML 48 47 3 50 3 1 19 147 259 -8.153 -0.018 -6.807 -1.841 -1.776 -2.591 1.706 D 49 47 3 50 3 0 13 144 256 -6.728 -2.241 -0.360 IL 50 50 3 50 3 1 18 147 260 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - G - - - ML 51 50 3 53 3 1 18 146 258 -8.153 -0.018 -6.807 -1.979 -3.256 1.800 -2.644 D 52 50 3 53 3 0 12 143 255 -6.728 -2.241 -0.360 IL 53 53 3 53 3 1 17 146 259 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - U - - - ML 54 53 3 56 3 1 17 145 257 -8.153 -0.018 -6.807 -0.699 -1.188 -1.743 1.404 D 55 53 3 56 3 0 12 142 254 -6.728 -2.241 -0.360 IL 56 56 3 56 3 1 16 145 258 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - a - - - ML 57 56 3 59 3 1 17 144 256 -8.153 -0.018 -6.807 0.404 -0.473 0.268 -0.412 D 58 56 3 59 3 0 11 141 253 -6.728 -2.241 -0.360 IL 59 59 3 59 3 1 16 144 257 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 14 - a - - - ML 60 59 3 62 3 1 16 143 255 -8.153 -0.018 -6.807 0.539 -0.874 -0.670 0.458 D 61 59 3 62 3 0 11 140 253 -6.728 -2.241 -0.360 IL 62 62 3 62 3 1 15 143 256 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 15 - U - - - ML 63 62 3 65 3 1 15 142 254 -8.153 -0.018 -6.807 -1.841 -1.776 -2.591 1.706 D 64 62 3 65 3 0 10 140 252 -6.728 -0.915 -1.120 IL 65 65 3 65 3 1 14 142 255 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 16 - G - - - ML 66 65 3 68 3 1 14 141 253 -8.216 -0.017 -6.870 -2.107 -3.402 1.819 -2.788 D 67 65 3 68 3 0 9 138 251 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 13 141 254 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 17 - G - - - ML 69 68 3 71 3 1 14 140 252 -8.216 -0.017 -6.870 -0.513 -2.262 1.476 -1.691 D 70 68 3 71 3 0 8 137 250 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 13 140 253 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 18 - C - - - ML 72 71 3 74 3 1 13 139 251 -8.216 -0.017 -6.870 -2.358 1.756 -3.189 -1.650 D 73 71 3 74 3 0 8 136 249 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 12 139 252 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 19 - A - - - ML 75 74 3 77 3 1 12 138 250 -8.216 -0.017 -6.870 1.809 -2.881 -2.463 -2.476 D 76 74 3 77 3 0 7 135 248 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 11 138 251 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 20 - U - - - ML 78 77 3 80 3 1 11 137 249 -8.216 -0.017 -6.870 -1.962 -1.876 -2.715 1.731 D 79 77 3 80 3 0 6 134 247 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 10 137 250 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 21 - G - - - ML 81 80 3 83 3 1 10 136 248 -8.216 -0.017 -6.870 -2.107 -3.402 1.819 -2.788 D 82 80 3 83 3 0 5 133 246 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 10 136 249 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 22 - U - - - ML 84 83 3 86 3 1 9 135 247 -8.216 -0.017 -6.870 -1.962 -1.876 -2.715 1.731 D 85 83 3 86 3 0 5 132 245 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 9 135 248 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 23 - A - - - ML 87 86 3 89 3 1 9 134 246 -8.216 -0.017 -6.870 1.809 -2.881 -2.463 -2.476 D 88 86 3 89 3 0 4 132 244 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 8 134 247 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 24 - U - - - ML 90 89 3 92 3 1 8 133 245 -8.216 -0.017 -6.870 -1.962 -1.876 -2.715 1.731 D 91 89 3 92 3 0 4 131 243 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 7 133 246 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 25 - U - - - ML 93 92 3 95 3 1 7 132 244 -8.216 -0.161 -3.290 -1.341 -0.882 -2.086 1.499 D 94 92 3 95 3 0 3 130 242 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 7 133 245 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 26 - A - - - ML 96 95 3 98 3 1 8 131 244 -8.074 -0.019 -6.728 1.763 -2.593 -2.203 -2.158 D 97 95 3 98 3 0 2 129 241 -7.196 -2.709 -0.251 IL 98 98 3 98 3 1 7 132 244 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 27 - g - - - ML 99 98 3 101 3 1 7 130 243 -8.074 -0.019 -6.728 -0.342 -0.536 0.591 0.022 D 100 98 3 101 3 0 2 128 241 -7.196 -0.598 -1.588 IL 101 101 3 101 3 1 5 131 243 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 28 - C - - - ML 102 101 3 104 3 1 6 129 242 -8.216 -0.017 -6.870 -2.358 1.756 -3.189 -1.650 D 103 101 3 104 3 0 0 127 239 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 5 130 242 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 29 - U - - - ML 105 104 3 107 3 1 6 128 241 -8.216 -0.017 -6.870 -1.962 -1.876 -2.715 1.731 D 106 104 3 107 3 0 0 126 238 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 4 129 241 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 30 - G - - - ML 108 107 3 110 3 1 5 127 240 -8.216 -0.017 -6.870 -2.107 -3.402 1.819 -2.788 D 109 107 3 110 3 0 0 125 237 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 3 128 240 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 31 - A - - - ML 111 110 3 113 3 1 5 126 239 -8.216 -0.017 -6.870 1.809 -2.881 -2.463 -2.476 D 112 110 3 113 3 0 0 124 236 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 3 127 239 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 32 - A - - - ML 114 113 3 116 3 1 4 125 238 -8.216 -0.017 -6.870 1.809 -2.881 -2.463 -2.476 D 115 113 3 116 3 0 0 123 235 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 2 126 238 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 33 - U - - - ML 117 116 3 119 3 1 4 124 237 -8.216 -0.017 -6.870 -1.962 -1.876 -2.715 1.731 D 118 116 3 119 3 0 0 122 234 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 2 125 237 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 34 - c - - - ML 120 119 3 122 3 1 3 123 236 -8.216 -0.017 -6.870 -0.624 0.751 -0.959 0.207 D 121 119 3 122 3 0 0 121 233 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 124 236 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 35 - u - - - ML 123 122 3 125 3 1 3 122 235 -8.216 -0.017 -6.870 -0.917 0.495 -1.716 0.813 D 124 122 3 125 3 0 0 120 232 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 123 235 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 36 - A - - - ML 126 125 3 128 3 1 2 121 234 -8.216 -0.017 -6.870 1.208 -1.307 -0.815 -0.480 D 127 125 3 128 3 0 0 119 231 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 122 234 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 37 - a - - - ML 129 128 3 131 3 1 2 120 233 -8.216 -0.017 -6.870 0.757 -0.653 -0.704 0.085 D 130 128 3 131 3 0 0 118 230 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 121 233 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 38 - A - - - ML 132 131 3 134 3 1 2 119 232 -8.216 -0.017 -6.870 1.004 -1.118 -1.235 0.150 D 133 131 3 134 3 0 0 117 229 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 120 232 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 39 - G - - - ML 135 134 3 137 3 1 1 118 231 -8.216 -0.017 -6.870 -0.979 -1.347 1.436 -1.345 D 136 134 3 137 3 0 0 116 228 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 119 231 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 40 - u - - - ML 138 137 3 140 3 1 1 117 230 -8.216 -0.017 -6.870 -0.400 0.092 -1.388 0.844 D 139 137 3 140 3 0 0 115 227 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 118 230 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 41 - U - - - ML 141 140 3 143 3 1 1 116 229 -8.216 -0.017 -6.870 -1.962 -1.876 -2.715 1.731 D 142 140 3 143 3 0 0 114 226 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 117 229 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 42 - G - - - ML 144 143 3 146 3 1 1 115 228 -8.216 -0.099 -3.995 -2.107 -3.402 1.819 -2.788 D 145 143 3 146 3 0 0 113 225 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 116 228 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 43 - A - - - ML 147 146 3 149 3 1 1 115 227 -8.135 -0.018 -6.789 1.784 -2.718 -2.316 -2.296 D 148 146 3 149 3 0 0 111 224 -6.849 -0.816 -1.240 IL 149 149 3 149 3 1 1 115 227 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 44 - U - - - ML 150 149 3 152 3 1 1 114 226 -8.216 -0.017 -6.870 -0.760 -1.255 -1.826 1.437 D 151 149 3 152 3 0 0 106 219 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 114 226 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 45 - G - - - ML 153 152 3 155 3 1 1 113 225 -1.832 -0.493 -6.870 -0.365 -1.439 1.077 -0.424 D 154 152 3 155 3 0 0 93 206 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 119 232 -0.237 -2.784 -7.351 0.000 0.000 0.000 0.000 [ MATL 48 ] 58 - U - - - ML 156 155 3 158 3 1 1 35 54 -8.216 -0.017 -6.870 -1.280 -0.752 -2.026 1.459 D 157 155 3 158 3 0 0 34 53 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 59 - u - - - ML 159 158 3 161 3 1 1 34 53 -8.216 -0.017 -6.870 -0.076 -0.499 0.134 0.318 D 160 158 3 161 3 0 0 33 52 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 60 - A - - - ML 162 161 3 164 3 1 1 33 52 -8.216 -0.017 -6.870 1.809 -2.881 -2.463 -2.476 D 163 161 3 164 3 0 0 32 51 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 61 - G - - - ML 165 164 3 167 3 1 1 32 51 -8.216 -0.017 -6.870 -0.039 -1.962 1.255 -1.387 D 166 164 3 167 3 0 0 31 50 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 62 - u - - - ML 168 167 3 170 3 1 1 31 50 -8.216 -0.017 -6.870 -0.917 0.489 -1.716 0.818 D 169 167 3 170 3 0 0 30 49 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 63 - U - - - ML 171 170 3 173 3 1 1 30 49 -8.216 -0.017 -6.870 -1.962 -1.876 -2.715 1.731 D 172 170 3 173 3 0 0 29 48 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 32 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 64 - C - - - ML 174 173 3 176 3 1 1 29 48 -8.216 -0.017 -6.870 -0.769 1.376 -2.058 -0.792 D 175 173 3 176 3 0 0 28 47 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 65 - U - - - ML 177 176 3 179 3 1 1 28 47 -8.216 -0.017 -6.870 -1.105 -0.340 -1.862 1.304 D 178 176 3 179 3 0 0 27 46 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 66 - A - - - ML 180 179 3 182 3 1 1 27 46 -8.216 -0.017 -6.870 1.809 -2.881 -2.463 -2.476 D 181 179 3 182 3 0 0 26 45 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 67 - a - - - ML 183 182 3 185 3 1 1 25 44 -8.216 -0.017 -6.870 0.960 -1.619 0.319 -1.053 D 184 182 3 185 3 0 0 24 43 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 68 - A - - - ML 186 185 3 188 3 1 1 24 43 -8.216 -0.116 -3.752 1.809 -2.881 -2.463 -2.476 D 187 185 3 188 3 0 0 23 42 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 69 - A - - - ML 189 188 3 191 3 1 1 23 42 -8.118 -0.019 -6.772 1.778 -2.683 -2.284 -2.256 D 190 188 3 191 3 0 0 22 41 -6.959 -0.738 -1.350 IL 191 191 3 191 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 70 - U - - - ML 192 191 3 194 3 1 1 22 41 -8.216 -0.017 -6.870 -1.962 -1.876 -2.715 1.731 D 193 191 3 194 3 0 0 21 40 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 71 - U - - - ML 195 194 3 197 3 1 1 21 40 -8.216 -0.017 -6.870 -0.493 -1.163 -1.667 1.338 D 196 194 3 197 3 0 0 20 39 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 72 - A - - - ML 198 197 3 200 3 1 1 20 38 -8.216 -0.017 -6.870 1.809 -2.881 -2.463 -2.476 D 199 197 3 200 3 0 0 19 38 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 73 - C - - - ML 201 200 3 203 3 1 1 19 37 -8.216 -0.017 -6.870 -1.168 1.169 -2.013 0.082 D 202 200 3 203 3 0 0 18 37 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 74 - a - - - ML 204 203 3 206 3 1 1 17 36 -8.216 -0.017 -6.870 0.927 -1.051 -0.720 0.013 D 205 203 3 206 3 0 0 17 36 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 75 - C - - - ML 207 206 3 209 3 1 1 16 35 -8.216 -0.017 -6.870 -1.411 1.381 -2.262 -0.302 D 208 206 3 209 3 0 0 16 34 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 76 - U - - - ML 210 209 3 212 3 1 1 15 33 -8.216 -0.017 -6.870 -0.368 -0.658 -1.460 1.156 D 211 209 3 212 3 0 0 15 33 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 77 - G - - - ML 213 212 3 215 3 1 1 13 31 -8.216 -0.017 -6.870 -0.892 -2.527 1.599 -1.953 D 214 212 3 215 3 0 0 13 32 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 78 - A - - - ML 216 215 3 218 2 1 1 1 1 * 0.000 1.402 -0.931 -1.516 -1.051 D 217 215 3 218 2 0 0 0 0 * 0.000 IL 218 218 3 218 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 69 ] - - - - - - E 219 218 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD45 ACC RF00279 DESC Small nucleolar RNA SNORD45 LENG 72 MAXL 228 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 02:22:54 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00279/CM NSEQ 11 EFFN 2.865479 CKSUM 68659210 STATS LOCAL MSV -8.7256 0.71877 STATS LOCAL VITERBI -9.0436 0.71877 STATS LOCAL FORWARD -3.2414 0.71877 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.20912 1.75723 1.49575 1.18765 1.38629 1.38629 1.38629 1.38629 0.08279 4.06252 2.77660 1.46634 0.26236 0.00000 * 1 2.10867 2.84423 0.28365 2.69728 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 2 2.29698 3.03923 0.22703 2.90644 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 3 2.28377 1.63034 2.08283 0.54877 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 4 2.23656 0.58854 2.09013 1.54006 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 5 0.13219 3.38659 3.09644 3.10578 5 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 6 0.34577 2.73936 1.98023 2.41151 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 7 1.69335 2.18253 2.52243 0.47308 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.13767 4.01643 2.20186 1.46634 0.26236 1.72597 0.19601 8 2.65446 3.52594 0.15635 3.10147 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04052 3.91928 3.91928 1.46634 0.26236 0.56093 0.84554 9 0.13219 3.38659 3.09644 3.10578 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 10 2.74900 2.68952 3.27165 0.18615 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 11 2.85025 3.74781 0.12495 3.32250 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 12 1.90299 2.25348 2.64669 0.39310 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 13 1.10568 1.71428 1.18738 1.69335 13 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 14 1.00657 2.01107 1.85829 1.06495 14 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 15 2.74900 2.68952 3.27165 0.18615 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 0.44006 1.03283 16 2.94062 3.84916 0.11290 3.42265 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 17 1.76736 3.01677 0.34555 2.62514 17 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 18 3.13397 0.15167 3.70772 2.62215 18 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 19 0.12000 3.47706 3.17844 3.20572 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 20 2.83533 2.76152 3.36084 0.17031 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 21 2.94062 3.84916 0.11290 3.42265 21 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 22 2.83533 2.76152 3.36084 0.17031 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 23 0.12000 3.47706 3.17844 3.20572 23 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 24 2.83533 2.76152 3.36084 0.17031 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 25 2.37616 2.02308 2.89324 0.32927 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.14333 4.06252 2.15136 1.46634 0.26236 1.09861 0.40547 26 0.14961 3.27162 2.99253 2.97881 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03895 3.95814 3.95814 1.46634 0.26236 2.17031 0.12120 27 1.64520 1.76352 0.95644 1.38099 27 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03895 3.95814 3.95814 1.46634 0.26236 0.25914 1.47716 28 3.13397 0.15167 3.70772 2.62215 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 29 2.83533 2.76152 3.36084 0.17031 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 30 2.94062 3.84916 0.11290 3.42265 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 31 0.12000 3.47706 3.17844 3.20572 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 32 0.12000 3.47706 3.17844 3.20572 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 33 2.83533 2.76152 3.36084 0.17031 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 34 1.84950 0.84599 2.06500 1.24920 34 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 35 2.06388 1.02780 2.62233 0.81506 35 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 36 0.53489 2.32201 1.96635 1.73601 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 37 0.85279 1.84752 1.88390 1.33123 37 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 38 0.67712 2.18955 2.27210 1.28425 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 39 2.12039 2.34427 0.36841 2.38310 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 40 1.68115 1.31416 2.37857 0.79306 40 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 41 2.83533 2.76152 3.36084 0.17031 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 42 2.94062 3.84916 0.11290 3.42265 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.09621 4.06252 2.59671 1.46634 0.26236 1.09861 0.40547 43 0.13585 3.36113 3.07340 3.07765 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03719 4.00350 4.00350 1.46634 0.26236 0.37966 1.15232 44 1.94678 2.30220 2.70668 0.37038 44 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 45 1.66177 2.42009 0.61935 1.69833 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.39780 1.16797 4.06252 2.35453 0.09975 1.09861 0.40547 46 2.33122 1.92875 2.84979 0.35719 58 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 47 1.44795 1.73703 1.28259 1.16608 59 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 48 0.12000 3.47706 3.17844 3.20572 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 49 1.42356 2.80035 0.49730 2.40589 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 50 2.06388 1.03237 2.62200 0.81144 62 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 51 2.83533 2.76152 3.36084 0.17031 63 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 52 1.95832 0.40677 2.88299 1.98677 64 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 53 2.20314 1.62818 2.72978 0.46517 65 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 54 0.12000 3.47706 3.17844 3.20572 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 55 0.70811 2.55671 1.15414 2.16685 67 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 56 0.12000 3.47706 3.17844 3.20572 68 A - - _ 1.38629 1.38629 1.38629 1.38629 0.10969 4.06252 2.44546 1.46634 0.26236 1.09861 0.40547 57 0.13964 3.33551 3.05024 3.04936 69 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03768 3.99051 3.99051 1.46634 0.26236 0.33430 1.25822 58 2.83533 2.76152 3.36084 0.17031 70 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 59 1.75095 2.23426 2.58976 0.43962 71 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 60 0.12000 3.47706 3.17844 3.20572 72 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 61 2.24966 0.55433 2.84153 1.34028 73 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 62 0.73255 2.13731 1.89658 1.38124 74 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 63 2.42967 0.40731 3.02522 1.61975 75 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 64 1.65784 1.85856 2.43324 0.56951 76 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 65 2.04222 3.20817 0.26148 2.81483 77 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 66 0.39701 2.04428 2.48456 2.16426 78 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 67 1.61502 2.26187 0.65523 1.72803 79 G - - > 1.38629 1.38629 1.38629 1.38629 0.03502 4.06252 4.06252 1.46634 0.26236 1.09861 0.40547 68 0.73797 2.25219 1.36691 1.82106 80 a - - > 1.38629 1.38629 1.38629 1.38629 0.08279 4.06252 2.77660 1.46634 0.26236 1.09861 0.40547 69 3.13775 0.32571 2.86984 1.72656 81 C - - > 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 70 2.94674 0.49765 2.67375 1.30734 82 C - - > 1.38629 1.38629 1.38629 1.38629 0.03670 4.01643 4.01643 1.46634 0.26236 1.72597 0.19601 71 1.84764 2.11956 1.68302 0.62270 83 U - - : 1.38629 1.38629 1.38629 1.38629 0.34647 4.01643 1.29170 1.46634 0.26236 1.72597 0.19601 72 1.71881 1.94764 1.86052 0.64909 84 U - - : 1.38629 1.38629 1.38629 1.38629 0.02516 3.69512 * 1.46634 0.26236 0.00000 * //