INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD61 ACC RF00270 DESC Small nucleolar RNA SNORD61 STATES 220 NODES 72 CLEN 72 W 99 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 21:50:10 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00270/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 36 EFFN 6.780762 CKSUM 594311165 NULL 0.000 0.000 0.000 0.000 GA 43.00 TC 43.00 NC 42.90 EFP7GF -12.9687 0.71871 ECMLC 0.54440 -8.09221 2.69420 1600000 425984 0.002817 ECMGC 0.39985 -16.10320 -2.24626 1600000 101948 0.003924 ECMLI 0.48901 -6.14346 5.08726 1600000 291286 0.004120 ECMGI 0.40237 -12.41601 0.53637 1600000 73356 0.005453 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 99 134 -8.044 -9.290 -0.035 -5.743 IL 1 1 2 1 4 1 30 100 135 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 31 100 135 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 88 - U - - MR 3 2 3 5 3 1 31 99 134 -9.489 -0.008 -7.807 -0.706 -0.263 -0.949 1.026 D 4 2 3 5 3 0 25 97 132 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 30 99 134 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 87 - U - - MR 6 5 3 8 5 1 30 98 133 -8.175 -0.018 -7.990 -8.203 -9.094 -0.439 -1.591 -1.049 1.291 D 7 5 3 8 5 0 24 96 131 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 28 98 133 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 86 G C - - MP 9 8 3 13 6 2 30 97 132 -9.717 -9.656 -0.014 -8.433 -8.713 -9.108 -4.464 -3.041 -4.334 0.508 -5.270 -4.762 0.182 -4.929 -4.556 3.448 -4.827 -0.046 -0.279 -4.139 -2.423 -3.281 ML 10 8 3 13 6 1 25 95 130 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 24 95 130 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 21 93 128 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 27 96 131 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 27 96 131 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 85 C G - - MP 15 14 6 19 4 2 28 95 130 -8.198 -4.372 -0.090 -6.819 -4.997 -4.873 -4.771 -0.873 -3.464 -5.288 3.420 -4.231 -4.742 0.227 -5.097 -2.656 1.314 -5.083 -1.067 -3.523 ML 16 14 6 19 4 1 24 94 129 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 4 1 22 93 128 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 18 14 6 19 4 0 21 92 127 -4.568 -4.250 -2.265 -0.520 IL 19 19 5 19 4 1 26 95 130 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 20 20 6 20 3 1 26 94 129 -1.743 -0.610 -4.443 0.000 0.000 0.000 0.000 [ MATL 5 ] 3 - u - - - ML 21 20 6 23 3 1 26 93 128 -9.153 -0.009 -7.807 -0.036 -0.938 -0.798 0.947 D 22 20 6 23 3 0 20 91 126 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 25 94 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 4 - A - - - ML 24 23 3 26 3 1 25 92 127 -9.153 -0.009 -7.807 1.066 -2.847 0.656 -2.381 D 25 23 3 26 3 0 19 90 125 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 24 93 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - U - - - ML 27 26 3 29 3 1 24 91 126 -9.153 -0.009 -7.807 -1.870 -2.045 -0.947 1.568 D 28 26 3 29 3 0 18 89 124 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 23 92 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 6 - G - - - ML 30 29 3 32 3 1 24 90 125 -9.153 -0.009 -7.807 -3.693 -5.152 1.944 -4.431 D 31 29 3 32 3 0 18 88 123 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 22 91 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 7 - A - - - ML 33 32 3 35 3 1 23 89 124 -9.153 -0.009 -7.807 1.944 -4.597 -4.060 -4.315 D 34 32 3 35 3 0 17 87 122 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 22 90 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 8 - U - - - ML 36 35 3 38 3 1 22 88 123 -9.153 -0.009 -7.807 -3.631 -3.309 -4.421 1.915 D 37 35 3 38 3 0 16 86 121 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 21 89 124 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 9 - G - - - ML 39 38 3 41 3 1 21 87 122 -9.153 -0.009 -7.807 -2.691 -3.792 1.825 -2.120 D 40 38 3 41 3 0 15 85 120 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 20 88 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 10 - A - - - ML 42 41 3 44 3 1 20 86 121 -9.153 -0.009 -7.807 1.836 -3.245 -3.188 -2.224 D 43 41 3 44 3 0 15 84 119 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 19 87 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - a - - - ML 45 44 3 47 3 1 19 85 120 -9.153 -0.009 -7.807 0.761 -0.115 -1.333 -0.022 D 46 44 3 47 3 0 14 83 118 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 18 86 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - U - - - ML 48 47 3 50 3 1 18 84 119 -9.153 -0.009 -7.807 -1.751 -0.433 -2.076 1.446 D 49 47 3 50 3 0 13 82 117 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 17 85 120 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - U - - - ML 51 50 3 53 3 1 17 83 118 -3.541 -0.137 -7.807 -1.371 -1.049 -0.758 1.344 D 52 50 3 53 3 0 12 80 115 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 17 83 118 -1.676 -0.620 -4.791 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - U - - - ML 54 53 3 56 3 1 16 81 116 -9.153 -0.009 -7.807 -1.361 -1.211 -2.678 1.596 D 55 53 3 56 3 0 12 79 114 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 16 82 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - u - - - ML 57 56 3 59 3 1 15 80 115 -9.153 -0.009 -7.807 0.200 -0.320 -0.183 0.226 D 58 56 3 59 3 0 11 79 114 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 15 81 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 60 59 3 62 3 1 14 79 114 -9.153 -0.078 -4.293 1.211 -1.346 -1.506 -0.090 D 61 59 3 62 3 0 10 78 113 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 14 80 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - U - - - ML 63 62 3 65 3 1 14 78 114 -9.084 -0.009 -7.738 -0.501 -0.837 -1.569 1.261 D 64 62 3 65 3 0 10 77 112 -7.160 -0.617 -1.552 IL 65 65 3 65 3 1 13 79 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - u - - - ML 66 65 3 68 3 1 13 77 113 -9.153 -0.009 -7.807 -0.397 -1.030 -0.214 0.918 D 67 65 3 68 3 0 8 75 110 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 12 78 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - G - - - ML 69 68 3 71 3 1 12 76 112 -4.377 -0.120 -4.984 -0.538 -0.850 1.007 -0.421 D 70 68 3 71 3 0 7 73 108 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 13 81 116 -0.758 -1.387 -5.243 0.000 0.000 0.000 0.000 [ MATL 22 ] 28 - c - - - ML 72 71 3 74 3 1 12 68 91 -5.315 -0.044 -7.767 -0.354 0.692 -1.077 0.174 D 73 71 3 74 3 0 6 66 89 -6.827 -2.340 -0.333 IL 74 74 3 74 3 1 11 69 92 -1.605 -0.688 -4.305 0.000 0.000 0.000 0.000 [ MATL 23 ] 30 - a - - - ML 75 74 3 77 3 1 12 67 90 -9.113 -0.009 -7.767 0.811 -1.381 -0.635 0.285 D 76 74 3 77 3 0 6 65 88 -6.827 -2.340 -0.333 IL 77 77 3 77 3 1 10 69 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 31 - u - - - ML 78 77 3 80 3 1 11 66 89 -9.113 -0.009 -7.767 -0.279 -0.322 -0.988 0.904 D 79 77 3 80 3 0 5 64 87 -6.827 -2.340 -0.333 IL 80 80 3 80 3 1 10 68 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 32 - U - - - ML 81 80 3 83 3 1 10 65 88 -9.113 -0.047 -5.036 -1.731 -0.958 -1.694 1.524 D 82 80 3 83 3 0 5 63 86 -6.827 -2.340 -0.333 IL 83 83 3 83 3 1 9 67 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 33 - G - - - ML 84 83 3 86 3 1 9 64 87 -9.075 -0.010 -7.729 -0.963 -1.599 1.440 -1.173 D 85 83 3 86 3 0 4 62 85 -7.246 -2.759 -0.242 IL 86 86 3 86 3 1 9 66 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 34 - A - - - ML 87 86 3 89 3 1 8 63 86 -9.075 -0.010 -7.729 1.810 -3.046 -3.006 -2.005 D 88 86 3 89 3 0 4 62 84 -7.246 -0.573 -1.638 IL 89 89 3 89 3 1 7 65 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 35 - U - - - ML 90 89 3 92 3 1 7 62 85 -9.153 -0.009 -7.807 -0.543 -1.276 -0.932 1.249 D 91 89 3 92 3 0 2 61 83 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 6 64 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 36 - c - - - ML 93 92 3 95 3 1 7 61 84 -9.153 -0.009 -7.807 -0.437 0.723 -0.475 -0.167 D 94 92 3 95 3 0 2 60 82 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 6 63 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 37 - a - - - ML 96 95 3 98 3 1 6 60 83 -9.153 -0.074 -4.377 0.947 -1.186 -0.811 0.087 D 97 95 3 98 3 0 1 59 81 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 5 62 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 38 - U - - - ML 99 98 3 101 3 1 6 59 82 -9.088 -0.045 -5.112 -0.459 -1.381 -1.327 1.316 D 100 98 3 101 3 0 0 58 80 -7.115 -1.286 -0.779 IL 101 101 3 101 3 1 5 61 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 39 - c - - - ML 102 101 3 104 3 1 7 58 81 -9.088 -0.009 -7.742 0.140 0.670 -1.180 -0.208 D 103 101 3 104 3 0 0 57 79 -7.124 -1.273 -0.788 IL 104 104 3 104 3 1 4 60 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 40 - U - - - ML 105 104 3 107 3 1 6 57 80 -4.531 -0.071 -7.776 -0.279 -0.754 -1.034 1.067 D 106 104 3 107 3 0 0 55 77 -6.703 -2.216 -0.367 IL 107 107 3 107 3 1 4 58 80 -1.722 -0.621 -4.423 0.000 0.000 0.000 0.000 [ MATL 34 ] 42 - G - - - ML 108 107 3 110 3 1 6 56 78 -9.122 -0.009 -7.776 -1.004 -2.446 1.500 -1.032 D 109 107 3 110 3 0 0 54 77 -6.703 -2.216 -0.367 IL 110 110 3 110 3 1 3 58 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 43 - A - - - ML 111 110 3 113 3 1 5 55 77 -9.122 -0.009 -7.776 1.200 -0.646 -1.279 -0.619 D 112 110 3 113 3 0 0 53 76 -6.703 -2.216 -0.367 IL 113 113 3 113 3 1 3 57 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 44 - a - - - ML 114 113 3 116 3 1 4 54 76 -9.122 -0.009 -7.776 0.872 -0.481 -0.751 -0.218 D 115 113 3 116 3 0 0 53 75 -6.703 -0.937 -1.095 IL 116 116 3 116 3 1 2 56 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 45 - a - - - ML 117 116 3 119 3 1 3 53 75 -9.153 -0.009 -7.807 0.833 -0.744 -0.298 -0.307 D 118 116 3 119 3 0 0 51 74 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 55 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 46 - U - - - ML 120 119 3 122 3 1 2 52 74 -9.153 -0.009 -7.807 -0.882 -1.432 -1.400 1.437 D 121 119 3 122 3 0 0 50 73 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 54 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 47 - G - - - ML 123 122 3 125 3 1 1 51 73 -9.153 -0.074 -4.375 -0.388 -1.886 1.393 -1.557 D 124 122 3 125 3 0 0 49 72 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 53 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 48 - A - - - ML 126 125 3 128 3 1 1 50 72 -9.088 -0.039 -5.319 1.533 -2.108 -1.474 -0.961 D 127 125 3 128 3 0 0 48 70 -7.116 -2.629 -0.267 IL 128 128 3 128 3 1 1 52 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 49 - U - - - ML 129 128 3 131 3 1 2 49 71 -4.960 -0.054 -7.713 -0.196 -0.759 -0.985 1.022 D 130 128 3 131 3 0 0 46 69 -7.396 -2.909 -0.216 IL 131 131 3 131 3 1 1 50 72 -1.643 -0.665 -4.344 0.000 0.000 0.000 0.000 [ MATL 42 ] 51 - a - - - ML 132 131 3 134 3 1 1 48 70 -9.059 -0.073 -4.388 0.856 -0.856 -0.402 -0.183 D 133 131 3 134 3 0 0 46 68 -7.396 -2.909 -0.216 IL 134 134 3 134 3 1 1 50 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 52 - A - - - ML 135 134 3 137 3 1 2 47 69 -8.995 -0.010 -7.649 1.296 -1.397 -1.402 -0.348 D 136 134 3 137 3 0 0 45 67 -7.844 -3.357 -0.155 IL 137 137 3 137 3 1 1 49 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 53 - u - - - ML 138 137 3 140 3 1 2 46 68 -8.995 -0.010 -7.649 0.254 -0.758 -1.185 0.829 D 139 137 3 140 3 0 0 44 66 -7.844 -1.896 -0.460 IL 140 140 3 140 3 1 1 48 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 54 - g - - - ML 141 140 3 143 3 1 2 45 67 -9.036 -0.010 -7.690 -0.059 -0.746 0.737 -0.364 D 142 140 3 143 3 0 0 43 66 -7.573 -2.099 -0.393 IL 143 143 3 143 3 1 1 47 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 55 - u - - - ML 144 143 3 146 3 1 1 44 66 -9.059 -0.010 -7.713 -0.301 -0.043 -1.785 0.947 D 145 143 3 146 3 0 0 43 65 -7.396 -0.506 -1.787 IL 146 146 3 146 3 1 1 46 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 56 - A - - - ML 147 146 3 149 3 1 1 43 65 -9.153 -0.009 -7.807 1.011 -0.646 -1.145 -0.163 D 148 146 3 149 3 0 0 41 64 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 45 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 57 - u - - - ML 150 149 3 152 3 1 1 42 64 -9.153 -0.009 -7.807 -0.434 0.135 -1.911 0.923 D 151 149 3 152 3 0 0 40 62 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 43 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 58 - u - - - ML 153 152 3 155 3 1 1 41 63 -1.407 -0.927 -3.367 0.117 -0.778 -0.981 0.868 D 154 152 3 155 3 0 0 36 58 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 41 63 -1.196 -0.859 -6.357 0.000 0.000 0.000 0.000 [ MATL 50 ] 63 - u - - - ML 156 155 3 158 3 1 1 34 53 -9.013 -0.010 -7.667 0.221 -0.691 -0.969 0.769 D 157 155 3 158 3 0 0 33 52 -7.734 -3.247 -0.168 IL 158 158 3 158 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 64 - U - - - ML 159 158 3 161 3 1 1 33 52 -9.013 -0.010 -7.667 -0.067 -1.426 -1.224 1.167 D 160 158 3 161 3 0 0 32 51 -7.734 -0.384 -2.126 IL 161 161 3 161 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 65 - g - - - ML 162 161 3 164 3 1 1 32 51 -9.153 -0.009 -7.807 -1.266 -1.910 0.853 0.597 D 163 161 3 164 3 0 0 31 50 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 66 - U - - - ML 165 164 3 167 3 1 1 31 50 -9.153 -0.009 -7.807 -1.143 -2.208 -2.909 1.677 D 166 164 3 167 3 0 0 30 49 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 67 - C - - - ML 168 167 3 170 3 1 1 30 49 -9.153 -0.009 -7.807 -2.415 1.787 -3.721 -1.810 D 169 167 3 170 3 0 0 29 48 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 68 - C - - - ML 171 170 3 173 3 1 1 29 48 -9.153 -0.009 -7.807 -4.244 1.931 -4.891 -3.316 D 172 170 3 173 3 0 0 28 47 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 69 - U - - - ML 174 173 3 176 3 1 1 28 47 -9.153 -0.009 -7.807 -3.631 -3.309 -4.421 1.915 D 175 173 3 176 3 0 0 27 46 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 70 - C - - - ML 177 176 3 179 3 1 1 27 46 -9.153 -0.009 -7.807 -4.244 1.931 -4.891 -3.316 D 178 176 3 179 3 0 0 26 45 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 71 - U - - - ML 180 179 3 182 3 1 1 26 45 -9.153 -0.009 -7.807 -3.631 -3.309 -4.421 1.915 D 181 179 3 182 3 0 0 25 44 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 72 - A - - - ML 183 182 3 185 3 1 1 25 43 -9.153 -0.009 -7.807 1.944 -4.597 -4.060 -4.315 D 184 182 3 185 3 0 0 24 43 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 73 - A - - - ML 186 185 3 188 3 1 1 24 42 -9.153 -0.009 -7.807 1.944 -4.597 -4.060 -4.315 D 187 185 3 188 3 0 0 23 42 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 74 - G - - - ML 189 188 3 191 3 1 1 23 41 -9.153 -0.009 -7.807 -3.693 -5.152 1.944 -4.431 D 190 188 3 191 3 0 0 22 41 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 75 - A - - - ML 192 191 3 194 3 1 1 21 40 -9.153 -0.009 -7.807 1.944 -4.597 -4.060 -4.315 D 193 191 3 194 3 0 0 21 40 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 76 - A - - - ML 195 194 3 197 3 1 1 20 39 -9.153 -0.009 -7.807 1.944 -4.597 -4.060 -4.315 D 196 194 3 197 3 0 0 20 39 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 77 - G - - - ML 198 197 3 200 3 1 1 19 38 -9.153 -0.009 -7.807 -3.693 -5.152 1.944 -4.431 D 199 197 3 200 3 0 0 19 38 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 78 - U - - - ML 201 200 3 203 3 1 1 18 36 -9.153 -0.009 -7.807 -3.631 -3.309 -4.421 1.915 D 202 200 3 203 3 0 0 18 36 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 79 - U - - - ML 204 203 3 206 3 1 1 17 35 -9.153 -0.009 -7.807 -1.029 -1.631 -1.983 1.553 D 205 203 3 206 3 0 0 17 35 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 80 - C - - - ML 207 206 3 209 3 1 1 15 34 -9.153 -0.009 -7.807 -4.244 1.931 -4.891 -3.316 D 208 206 3 209 3 0 0 16 34 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 81 - U - - - ML 210 209 3 212 3 1 1 14 32 -9.153 -0.009 -7.807 -3.631 -3.309 -4.421 1.915 D 211 209 3 212 3 0 0 15 33 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 82 - G - - - ML 213 212 3 215 3 1 1 12 31 -9.153 -0.009 -7.807 -3.693 -5.152 1.944 -4.431 D 214 212 3 215 3 0 0 13 32 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 83 - A - - - ML 216 215 3 218 2 1 1 1 1 * 0.000 1.790 -1.984 -2.910 -2.684 D 217 215 3 218 2 0 0 0 0 * 0.000 IL 218 218 3 218 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 71 ] - - - - - - E 219 218 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD61 ACC RF00270 DESC Small nucleolar RNA SNORD61 LENG 72 MAXL 146 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 21:50:10 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00270/CM NSEQ 36 EFFN 7.519043 CKSUM 594311165 STATS LOCAL MSV -8.2614 0.71871 STATS LOCAL VITERBI -9.1122 0.71871 STATS LOCAL FORWARD -3.2048 0.71871 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.27005 1.74466 1.55215 1.10056 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 0.00000 * 1 2.31323 2.58030 0.28272 2.63700 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 2 3.26312 0.37049 2.47336 1.67645 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 3 1.41599 2.06103 1.94648 0.71905 3 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 4 0.63577 3.48973 0.92018 3.18168 4 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 5 2.79179 2.89568 2.04376 0.28251 5 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 6 4.05686 5.08156 0.03449 4.56711 6 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 7 0.03389 4.70276 4.32590 4.50690 7 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 8 4.03123 3.79537 4.58109 0.05179 8 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 9 3.35294 4.12131 0.11394 2.87374 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 10 0.10564 3.72684 3.69807 2.96790 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 11 0.84846 1.46038 2.34486 1.41092 11 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 12 2.69116 1.69206 2.87838 0.36841 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 13 2.41967 2.14444 1.91372 0.43636 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.11021 2.34138 4.80814 0.36230 1.19096 1.09861 0.40547 14 2.37316 2.25617 3.33399 0.26603 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 15 1.24959 1.60773 1.50818 1.23195 17 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 16 0.53070 2.36002 2.47565 1.45552 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06720 4.80814 2.86764 1.46634 0.26236 1.09861 0.40547 17 1.75055 1.98764 2.50986 0.49754 19 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01731 4.75824 4.75824 1.46634 0.26236 0.25252 1.49987 18 1.68263 2.12899 1.52693 0.73823 20 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 19 1.78983 1.98615 0.66766 1.69892 21 G - - _ 1.38629 1.38629 1.38629 1.38629 0.09783 2.87089 3.30915 1.53460 0.24276 1.09861 0.40547 20 1.64966 0.88825 2.14979 1.27296 28 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04209 3.41691 4.77934 0.45140 1.01263 1.86828 0.16770 21 0.81298 2.39141 1.83492 1.18634 30 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01695 4.77934 4.77934 1.46634 0.26236 1.86828 0.16770 22 1.59216 1.61202 2.08280 0.74983 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01695 4.77934 4.77934 1.46634 0.26236 1.86828 0.16770 23 2.67800 2.07298 2.59068 0.31400 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04490 4.77934 3.33805 1.46634 0.26236 1.86828 0.16770 24 2.09511 2.52165 0.37140 2.23633 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01742 4.75186 4.75186 1.46634 0.26236 2.27246 0.10876 25 0.12295 3.58704 3.57104 2.81539 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01742 4.75186 4.75186 1.46634 0.26236 0.23082 1.57932 26 1.78471 2.31258 2.04094 0.50544 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 27 1.71383 0.86451 1.71423 1.52111 36 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 28 0.71731 2.24108 1.96161 1.32818 37 a - - _ 1.38629 1.38629 1.38629 1.38629 0.06399 4.80814 2.92214 1.46634 0.26236 1.09861 0.40547 29 1.72125 2.39390 2.33104 0.45777 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04345 4.76140 3.38245 1.46634 0.26236 0.79024 0.60465 30 1.29144 0.90294 2.22820 1.55103 39 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01727 4.76079 4.76079 1.46634 0.26236 0.78031 0.61298 31 1.59054 1.92600 2.11605 0.63498 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06197 2.96157 4.78590 0.29633 1.36080 1.73941 0.19313 32 2.11730 3.15472 0.33297 2.11858 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01683 4.78590 4.78590 1.46634 0.26236 1.73941 0.19313 33 0.53888 1.83915 2.30455 1.84614 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01683 4.78590 4.78590 1.46634 0.26236 1.73941 0.19313 34 0.77121 1.72167 1.91753 1.55205 44 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01683 4.78590 4.78590 1.46634 0.26236 0.43270 1.04627 35 0.79829 1.91163 1.59169 1.61706 45 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 36 2.03130 2.42797 2.37939 0.37395 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 37 1.67145 2.73198 0.40549 2.52222 47 G - - _ 1.38629 1.38629 1.38629 1.38629 0.06406 4.80814 2.92092 1.46634 0.26236 1.09861 0.40547 38 0.30896 2.92082 2.44272 2.07964 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03923 4.76134 3.50926 1.46634 0.26236 2.15187 0.12360 39 1.53031 1.93016 2.08093 0.66633 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05048 3.20675 4.73974 0.38702 1.13655 2.40681 0.09442 40 0.78202 1.99468 1.66640 1.52540 51 a - - _ 1.38629 1.38629 1.38629 1.38629 0.06463 4.73974 2.92163 1.46634 0.26236 2.40681 0.09442 41 0.47049 2.39684 2.39943 1.64232 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01848 4.69359 4.69359 1.46634 0.26236 2.78863 0.06348 42 1.20675 1.93075 2.23191 0.80192 53 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01848 4.69359 4.69359 1.46634 0.26236 1.32836 0.30777 43 1.43847 1.91217 0.85634 1.65948 54 g - - _ 1.38629 1.38629 1.38629 1.38629 0.01793 4.72341 4.72341 1.46634 0.26236 1.51283 0.24883 44 1.60827 1.41075 2.68046 0.71893 55 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01764 4.73974 4.73974 1.46634 0.26236 0.19870 1.71367 45 0.67259 1.84171 2.20516 1.51033 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 46 1.70524 1.28361 2.77465 0.73633 57 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 47 1.30536 1.94377 2.08083 0.77450 58 u - - _ 1.38629 1.38629 1.38629 1.38629 0.70425 0.91472 2.25482 0.62377 0.76770 1.09861 0.40547 48 1.23115 1.88123 2.07307 0.84434 63 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01824 4.70640 4.70640 1.46634 0.26236 2.69798 0.06972 49 1.43857 2.43192 2.26114 0.56101 64 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01824 4.70640 4.70640 1.46634 0.26236 0.14466 2.00483 50 2.35316 2.80147 0.77230 0.96166 65 g - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 51 2.20250 3.00582 3.50378 0.21085 66 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 52 3.11942 0.13713 4.05757 2.70804 67 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 53 4.44795 0.04249 4.87589 3.80448 68 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 54 4.03123 3.79537 4.58109 0.05179 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 55 4.44795 0.04249 4.87589 3.80448 70 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 56 4.03123 3.79537 4.58109 0.05179 71 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 57 0.03389 4.70276 4.32590 4.50690 72 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 58 0.03389 4.70276 4.32590 4.50690 73 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 59 4.05686 5.08156 0.03449 4.56711 74 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 60 0.03389 4.70276 4.32590 4.50690 75 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 61 0.03389 4.70276 4.32590 4.50690 76 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 62 4.05686 5.08156 0.03449 4.56711 77 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 63 4.03123 3.79537 4.58109 0.05179 78 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 64 2.13252 2.57531 2.80867 0.29431 79 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 65 4.44795 0.04249 4.87589 3.80448 80 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 66 4.03123 3.79537 4.58109 0.05179 81 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 67 4.05686 5.08156 0.03449 4.56711 82 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 68 0.13636 2.78166 3.49879 3.34373 83 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06429 2.91681 4.80814 0.27848 1.41442 1.09861 0.40547 69 1.81839 2.57146 0.33902 3.01964 85 G - - > 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 70 2.85016 0.35272 2.45356 1.87469 86 C - - > 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 71 1.70938 2.55372 2.12846 0.47448 87 U - - : 1.38629 1.38629 1.38629 1.38629 0.01646 4.80814 4.80814 1.46634 0.26236 1.09861 0.40547 72 1.90802 1.56895 2.05281 0.66361 88 U - - : 1.38629 1.38629 1.38629 1.38629 0.00826 4.79994 * 1.46634 0.26236 0.00000 * //