{"rfam": {"acc": "RF00236", "id": "ctRNA_pGA1", "description": "ctRNA", "comment": "Rolling circle replication plasmids contain a number of mechanisms to maintain a low copy number. One of these methods is to transcribe a small RNA called ctRNA (for counter-transcribed RNA) than is transcribed on the opposite strand to RepB the replication initiation protein. ctRNA binds to the mRNA of repB and causes translational inhibition.", "curation": {"author": "Bateman A", "seed_source": "PMID:12670963", "num_seed": 15, "num_full": 19, "num_species": 24, "type": "Gene; antisense;", "structure_source": "Published; PMID:12670963"}, "cm": {"build_command": "cmbuild -F CM SEED", "calibrate_command": "cmcalibrate --mpi CM", "search_command": "cmsearch --cpu 4 --verbose --nohmmonly -T 28.01 -Z 2958934 CM SEQDB", "cutoffs": {"gathering": 45.0, "trusted": 46.1, "noise": 44.9}}, "release": {"date": "2026-01-16", "number": "15.1"}, "clan": {"acc": null, "id": null}}}