INFERNAL1/a [1.1.4 | Dec 2020] NAME FIE3 ACC RF00227 DESC FIE3 (ftz instability element 3') element STATES 199 NODES 58 CLEN 65 W 180 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:26:24 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 4.194336 CKSUM 2899442063 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 40.30 NC 39.40 EFP7GF -8.5114 0.71953 ECMLC 0.45657 -11.09611 2.36902 1600000 561238 0.002138 ECMGC 0.42746 -11.47626 1.80358 1600000 116784 0.003425 ECMLI 0.46445 -7.35881 5.06730 1600000 385132 0.003116 ECMGI 0.45196 -6.94548 4.75012 1600000 79016 0.005062 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 180 322 -7.664 -7.872 -0.032 -6.286 IL 1 1 2 1 4 1 19 182 324 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 18 181 323 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 19 180 322 -8.640 -0.013 -7.294 -1.374 0.291 -2.186 1.118 D 4 2 3 5 3 0 13 177 319 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 18 180 322 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 19 179 321 -8.640 -0.013 -7.294 -2.905 -4.284 1.901 -3.642 D 7 5 3 8 3 0 13 176 318 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 17 179 321 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 1 18 178 320 -8.640 -0.013 -7.294 1.896 -3.710 -3.221 -3.386 D 10 8 3 11 3 0 12 175 317 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 17 178 320 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 1 17 177 319 -8.640 -0.013 -7.294 -2.763 -2.551 -3.538 1.846 D 13 11 3 14 3 0 11 174 316 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 16 177 319 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 16 176 318 -8.640 -0.013 -7.294 1.896 -3.710 -3.221 -3.386 D 16 14 3 17 3 0 11 173 315 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 15 176 318 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 16 175 317 -8.640 -0.013 -7.294 1.896 -3.710 -3.221 -3.386 D 19 17 3 20 3 0 10 172 313 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 15 175 317 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 15 174 316 -8.640 -0.013 -7.294 -2.763 -2.551 -3.538 1.846 D 22 20 3 23 3 0 10 170 312 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 14 174 316 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 14 173 315 -1.963 -0.440 -7.294 -2.905 -4.284 1.901 -3.642 D 25 23 3 26 3 0 9 168 310 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 15 177 319 -0.294 -2.492 -7.235 0.000 0.000 0.000 0.000 [ MATL 9 ] 17 - a - - - ML 27 26 3 29 3 1 13 169 311 -8.640 -0.013 -7.294 0.840 -2.115 0.716 -1.571 D 28 26 3 29 3 0 8 166 308 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 12 169 311 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 18 - C - - - ML 30 29 3 32 3 1 12 168 310 -8.640 -0.013 -7.294 -1.494 1.150 -2.386 0.305 D 31 29 3 32 3 0 8 165 307 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 12 168 310 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 19 - U - - - ML 33 32 3 35 3 1 11 167 309 -8.640 -0.013 -7.294 -1.416 0.124 -2.216 1.214 D 34 32 3 35 3 0 7 165 306 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 11 168 309 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 20 - C - - - ML 36 35 3 38 3 1 10 166 308 -8.640 -0.013 -7.294 0.185 1.003 -1.880 -0.767 D 37 35 3 38 3 0 7 164 306 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 10 167 308 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 21 - A - - - ML 39 38 3 41 3 1 9 165 307 -8.640 -0.013 -7.294 1.896 -3.710 -3.221 -3.386 D 40 38 3 41 3 0 7 163 305 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 9 166 308 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 22 - A - - - ML 42 41 3 44 3 1 8 164 306 -8.640 -0.440 -1.942 1.532 -2.350 -0.627 -1.920 D 43 41 3 44 3 0 6 162 304 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 9 165 307 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 23 - a - - - ML 45 44 3 47 3 1 8 164 306 -8.217 -0.017 -6.871 0.773 -1.631 0.573 -1.054 D 46 44 3 47 3 0 6 161 303 -8.422 -3.935 -0.102 IL 47 47 3 47 3 1 8 164 306 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 24 - A - - - ML 48 47 3 50 3 1 7 163 305 -1.166 -1.321 -2.700 1.230 -1.695 -0.156 -1.161 D 49 47 3 50 3 0 6 161 303 -8.422 -0.226 -2.814 IL 50 50 3 50 3 1 8 162 304 -2.595 -0.306 -5.295 0.000 0.000 0.000 0.000 [ MATL 17 ] 26 - C - - - ML 51 50 3 53 3 1 7 161 303 -8.474 -0.014 -7.128 -2.970 1.838 -3.778 -2.156 D 52 50 3 53 3 0 4 160 302 -7.553 -0.444 -1.945 IL 53 53 3 53 3 1 6 162 304 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 27 - U - - - ML 54 53 3 56 3 1 6 160 302 -8.995 -0.012 -7.312 -2.763 -2.551 -3.538 1.846 D 55 53 3 56 3 0 2 159 300 -5.620 -0.734 -1.403 IL 56 56 3 56 3 1 5 161 302 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 92 - A - - MR 57 56 3 59 3 1 5 159 301 -8.995 -0.012 -7.312 1.512 -0.929 -1.933 -1.470 D 58 56 3 59 3 0 1 157 299 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 4 160 301 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 91 - U - - MR 60 59 3 62 3 1 4 158 300 -8.995 -0.012 -7.312 -2.763 -2.551 -3.538 1.846 D 61 59 3 62 3 0 1 156 298 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 4 159 301 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 90 - A - - MR 63 62 3 65 3 1 3 157 299 -8.995 -0.012 -7.312 1.249 -2.147 0.107 -1.641 D 64 62 3 65 3 0 1 155 297 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 3 158 300 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 89 - a - - MR 66 65 3 68 3 1 2 156 298 -8.995 -0.351 -2.225 0.687 -1.247 0.063 -0.114 D 67 65 3 68 3 0 0 155 297 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 3 157 299 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 88 - u - - MR 69 68 3 71 3 1 3 156 298 -8.659 -0.015 -6.976 0.527 -1.006 -1.237 0.711 D 70 68 3 71 3 0 0 154 296 -8.276 -0.285 -2.506 IR 71 71 3 71 3 1 2 156 298 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 87 - u - - MR 72 71 3 74 3 1 3 155 297 -8.995 -0.012 -7.312 0.222 -0.305 -1.335 0.703 D 73 71 3 74 3 0 0 152 294 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 2 155 297 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 86 - G - - MR 75 74 3 77 3 1 2 154 296 -8.995 -0.012 -7.312 -0.994 -1.735 1.140 -0.008 D 76 74 3 77 3 0 0 151 293 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 1 154 296 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 85 - A - - MR 78 77 3 80 3 1 2 153 295 -8.995 -0.012 -7.312 1.106 -1.391 -1.522 0.161 D 79 77 3 80 3 0 0 150 292 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 1 153 295 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 84 - C - - MR 81 80 3 83 3 1 2 152 294 -8.995 -0.012 -7.312 -1.054 1.034 -0.142 -0.823 D 82 80 3 83 3 0 0 149 291 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 152 294 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 83 - A - - MR 84 83 3 86 3 1 2 151 293 -8.995 -0.012 -7.312 1.896 -3.710 -3.221 -3.386 D 85 83 3 86 3 0 0 147 289 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 151 293 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 82 - U - - MR 87 86 3 89 3 1 2 150 292 -8.995 -0.012 -7.312 -2.763 -2.551 -3.538 1.846 D 88 86 3 89 3 0 0 146 288 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 150 292 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 81 - G - - MR 90 89 3 92 3 1 1 149 291 -8.995 -0.012 -7.312 -2.905 -4.284 1.901 -3.642 D 91 89 3 92 3 0 0 143 285 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 149 291 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 80 - U - - MR 93 92 3 95 3 1 1 148 290 -8.995 -0.012 -7.312 0.134 -1.294 -1.629 1.119 D 94 92 3 95 3 0 0 139 281 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 148 290 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 79 - U - - MR 96 95 3 98 3 1 1 147 289 -2.254 -0.887 -2.002 -1.424 0.097 -2.223 1.229 D 97 95 3 98 3 0 0 124 266 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 158 300 -0.187 -3.084 -8.045 0.000 0.000 0.000 0.000 [ MATR 33 ] - 65 - a - - MR 99 98 3 101 3 1 1 77 131 -8.592 -0.016 -6.910 0.773 -1.631 0.573 -1.054 D 100 98 3 101 3 0 0 72 127 -8.446 -3.624 -0.127 IR 101 101 3 101 3 1 1 77 132 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 64 - u - - MR 102 101 3 104 3 1 1 76 130 -8.592 -0.016 -6.910 0.582 -0.973 -1.187 0.637 D 103 101 3 104 3 0 0 72 126 -8.446 -3.624 -0.127 IR 104 104 3 104 3 1 1 76 131 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 63 - A - - MR 105 104 3 107 3 1 1 75 129 -8.592 -0.016 -6.910 1.809 -2.885 -2.466 -2.479 D 106 104 3 107 3 0 0 71 126 -8.446 -3.624 -0.127 IR 107 107 3 107 3 1 1 75 130 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 62 - u - - MR 108 107 3 110 3 1 1 74 128 -8.592 -0.016 -6.910 -0.921 0.569 -1.725 0.753 D 109 107 3 110 3 0 0 71 125 -8.446 -3.624 -0.127 IR 110 110 3 110 3 1 1 74 129 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 61 - u - - MR 111 110 3 113 3 1 1 73 127 -8.592 -0.016 -6.910 0.607 -0.976 -1.184 0.612 D 112 110 3 113 3 0 0 71 125 -8.446 -3.624 -0.127 IR 113 113 3 113 3 1 1 73 128 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 60 - U - - MR 114 113 3 116 5 1 1 72 126 -7.317 -0.033 -7.132 -7.344 -8.236 -1.965 -1.879 -2.719 1.731 D 115 113 3 116 5 0 0 70 125 -6.822 -0.217 -4.449 -5.879 -3.874 IR 116 116 3 116 5 1 1 72 126 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 28 59 u a - - MP 117 116 3 121 6 2 2 71 125 -9.424 -9.363 -0.017 -8.140 -8.420 -8.815 -3.173 -3.263 -3.237 0.102 -2.644 -3.965 1.404 -3.216 -3.271 0.175 -3.761 -1.561 2.155 -3.432 1.584 1.287 ML 118 116 3 121 6 1 1 69 123 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 3 121 6 1 1 68 123 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 3 121 6 0 0 65 119 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 70 125 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 70 124 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 29 58 g u - - MP 123 122 6 127 6 2 2 69 123 -9.424 -9.363 -0.017 -8.140 -8.420 -8.815 -4.375 -3.014 -4.497 0.553 -5.778 -5.815 -1.147 -4.674 -4.211 2.524 -4.727 2.868 -1.354 -4.984 -3.102 -3.216 ML 124 122 6 127 6 1 1 67 121 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 66 121 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 63 117 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 68 123 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 68 122 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 30 57 g c - - MP 129 128 6 133 6 2 2 67 121 -9.424 -9.363 -0.017 -8.140 -8.420 -8.815 -4.392 -3.022 -4.488 0.542 -5.720 -5.643 -1.065 -4.710 -4.240 2.710 -4.738 2.693 -1.280 -4.866 -3.028 -3.235 ML 130 128 6 133 6 1 1 65 119 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 64 119 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 61 115 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 66 121 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 66 120 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 31 56 A U - - MP 135 134 6 139 6 2 2 65 119 -9.424 -9.363 -0.017 -8.140 -8.420 -8.815 -5.092 -3.872 -4.913 3.787 -6.037 -7.286 -1.655 -4.869 -4.877 -0.345 -5.481 -1.197 -2.050 -6.184 -3.584 -3.757 ML 136 134 6 139 6 1 1 63 117 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 63 117 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 59 114 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 64 119 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 64 118 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 32 55 G U - - MP 141 140 6 145 6 2 2 63 117 -9.424 -9.363 -0.017 -8.140 -8.420 -8.815 -4.462 -3.116 -4.653 0.485 -5.945 -6.905 -1.472 -4.628 -4.209 0.254 -4.801 3.606 -1.769 -5.747 -3.389 -3.261 ML 142 140 6 145 6 1 1 61 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 61 115 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 57 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 62 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 62 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 33 54 A U - - MP 147 146 6 151 6 2 2 61 115 -9.424 -9.363 -0.017 -8.140 -8.420 -8.815 -5.092 -3.872 -4.913 3.787 -6.037 -7.286 -1.655 -4.869 -4.877 -0.345 -5.481 -1.197 -2.050 -6.184 -3.584 -3.757 ML 148 146 6 151 6 1 1 59 114 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 59 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 56 111 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 60 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 60 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 34 53 C G - - MP 153 152 6 157 4 2 2 59 113 -7.534 -8.780 -0.050 -5.233 -6.053 -6.085 -5.466 -2.254 -3.937 -5.678 3.837 -4.905 -5.611 -2.156 -5.663 -4.106 -0.630 -6.017 -1.727 -4.418 ML 154 152 6 157 4 1 1 58 112 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 58 112 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 56 110 -12.737 -14.007 -2.036 -0.404 IL 157 157 5 157 4 1 1 58 112 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 58 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 46 ] - 52 - U - - MR 159 158 6 161 5 1 1 57 111 -7.699 -0.026 -7.514 -7.726 -8.618 -2.763 -2.551 -3.538 1.846 D 160 158 6 161 5 0 0 55 110 -5.352 -0.707 -2.978 -4.409 -2.404 IR 161 161 3 161 5 1 1 57 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 35 51 u a - - MP 162 161 3 166 6 2 2 56 110 -9.424 -9.363 -0.017 -8.140 -8.420 -8.815 -3.907 -3.835 -3.855 -0.287 -3.010 -4.510 1.201 -3.642 -3.867 -0.188 -4.294 -1.871 2.837 -4.136 -0.764 1.751 ML 163 161 3 166 6 1 1 54 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 3 166 6 1 1 54 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 3 166 6 0 0 51 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 55 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 55 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 36 50 G C - - MP 168 167 6 172 4 2 2 54 108 -7.664 -7.872 -0.032 -6.286 -4.631 -3.119 -4.661 0.361 -5.747 -5.115 -0.963 -5.050 -4.454 3.317 -4.842 1.676 -1.211 -4.594 -2.968 -3.508 ML 169 167 6 172 4 1 1 53 108 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 4 1 1 52 107 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 171 167 6 172 4 0 0 51 105 -4.568 -4.250 -2.265 -0.520 IL 172 172 5 172 4 1 1 54 109 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 173 173 6 173 3 1 1 53 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 37 - A - - - ML 174 173 6 176 3 1 1 52 106 -8.640 -0.013 -7.294 1.896 -3.710 -3.221 -3.386 D 175 173 6 176 3 0 0 49 104 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 52 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 38 - c - - - ML 177 176 3 179 3 1 1 51 105 -8.640 -0.180 -3.123 -0.243 0.867 -1.709 0.036 D 178 176 3 179 3 0 0 47 102 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 52 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 39 - a - - - ML 180 179 3 182 3 1 1 50 105 -8.474 -0.014 -7.128 0.785 -1.133 -0.279 -0.006 D 181 179 3 182 3 0 0 43 98 -7.553 -3.066 -0.192 IL 182 182 3 182 3 1 1 51 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 40 - c - - - ML 183 182 3 185 3 1 1 49 104 -2.024 -0.690 -2.898 0.563 0.609 -1.538 -0.616 D 184 182 3 185 3 0 0 37 91 -7.553 -3.066 -0.192 IL 185 185 3 185 3 1 1 52 107 -0.486 -1.864 -6.470 0.000 0.000 0.000 0.000 [ MATL 53 ] 46 - a - - - ML 186 185 3 188 3 1 1 16 34 -8.278 -0.017 -6.932 0.781 0.252 -1.323 -0.533 D 187 185 3 188 3 0 0 14 33 -8.270 -3.783 -0.114 IL 188 188 3 188 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 47 - a - - - ML 189 188 3 191 3 1 1 15 33 -8.278 -0.017 -6.932 0.520 -0.114 -1.127 0.244 D 190 188 3 191 3 0 0 13 32 -8.270 -3.783 -0.114 IL 191 191 3 191 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 48 - c - - - ML 192 191 3 194 3 1 1 13 31 -8.278 -0.017 -6.932 -0.434 0.300 -0.304 0.285 D 193 191 3 194 3 0 0 12 30 -8.270 -0.254 -2.662 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 49 - a - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 0.995 -1.324 -1.472 0.319 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 57 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME FIE3 ACC RF00227 DESC FIE3 (ftz instability element 3') element LENG 65 MAXL 253 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:26:25 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 5 EFFN 4.614258 CKSUM 2899442063 STATS LOCAL MSV -7.5992 0.71953 STATS LOCAL VITERBI -9.1697 0.71953 STATS LOCAL FORWARD -3.4566 0.71953 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.20284 1.73968 1.54994 1.16532 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 0.00000 * 1 2.41404 1.17330 2.98194 0.59691 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 2 3.51198 4.47878 0.06085 4.02576 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 3 0.06374 4.08042 3.73381 3.86553 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 4 3.42204 3.25762 3.96155 0.09449 4 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 5 0.06374 4.08042 3.73381 3.86553 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 6 0.06374 4.08042 3.73381 3.86553 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 7 3.42204 3.25762 3.96155 0.09449 7 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 8 3.51198 4.47878 0.06085 4.02576 8 G - - : 1.38629 1.38629 1.38629 1.38629 0.33194 1.31461 4.27667 2.06481 0.13564 1.09861 0.40547 9 0.79158 2.93960 0.87373 2.56927 17 a - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 10 2.49843 0.56868 3.12586 1.17892 18 C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 11 2.44565 1.29249 3.00428 0.52904 19 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 12 1.26002 0.66481 2.76359 1.97388 20 C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 13 0.06374 4.08042 3.73381 3.86553 21 A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 14 0.30953 3.10234 1.82330 2.81721 22 A - - : 1.38629 1.38629 1.38629 1.38629 0.33194 4.27667 1.31461 1.46634 0.26236 1.09861 0.40547 15 0.83831 2.57599 0.97183 2.17957 23 a - - : 1.38629 1.38629 1.38629 1.38629 0.03798 3.98271 3.98271 1.46634 0.26236 3.06048 0.04800 16 0.51517 2.62266 1.48956 2.25837 24 A - - : 1.38629 1.38629 1.38629 1.38629 0.98698 0.77054 1.80463 0.07868 2.58146 0.09842 2.36733 17 3.58566 0.09815 4.13476 3.00048 26 C - - : 1.38629 1.38629 1.38629 1.38629 0.03166 4.16155 4.16155 1.46634 0.26236 0.20418 1.68911 18 3.42204 3.25762 3.96155 0.09449 27 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 19 2.51029 1.74071 2.37035 0.43092 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 20 2.29201 3.47936 0.18709 3.25096 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 21 2.30055 3.43107 0.18956 3.21594 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 22 0.12557 3.84223 2.62933 3.71162 31 A - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 23 2.34935 3.66953 0.16516 3.46330 32 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 24 0.12527 3.84610 2.63033 3.71647 33 A - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 25 4.07994 0.09841 3.96223 2.85089 34 C - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 26 2.83531 1.90965 2.65141 0.32488 35 U - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 27 2.42238 3.35501 0.18019 3.18764 36 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 28 0.06374 4.08042 3.73381 3.86553 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 29 1.56970 0.76301 2.62602 1.37332 38 c - - _ 1.38629 1.38629 1.38629 1.38629 0.14678 4.27667 2.09858 1.46634 0.26236 1.09861 0.40547 30 0.83127 2.20200 1.57949 1.39496 39 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03166 4.16155 4.16155 1.46634 0.26236 2.38226 0.09689 31 0.98664 0.94137 2.50883 1.85970 40 c - - _ 1.38629 1.38629 1.38629 1.38629 0.51511 1.34896 1.94452 1.60450 0.22438 2.38226 0.09689 32 0.82984 1.19540 2.34917 1.79667 46 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03637 4.02518 4.02518 1.46634 0.26236 2.94493 0.05404 33 1.01834 1.46001 2.19377 1.22052 47 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03637 4.02518 4.02518 1.46634 0.26236 2.94493 0.05404 34 1.71503 1.16120 1.59207 1.19261 48 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03637 4.02518 4.02518 1.46634 0.26236 0.11117 2.25178 35 0.68043 2.35282 2.45579 1.16249 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 36 3.42128 0.45159 3.17505 1.24159 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 37 0.73897 2.85459 1.74585 1.23678 51 a - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 38 3.42204 3.25762 3.96155 0.09449 52 U - - - 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 39 3.12787 4.12185 0.08443 3.86633 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 40 3.91963 3.01372 3.65073 0.09974 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 41 3.65001 2.55901 3.45275 0.14506 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 42 3.92060 3.01390 3.65120 0.09970 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 43 3.43008 0.88182 3.23306 0.66524 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 44 3.46926 1.01277 3.28577 0.56522 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 45 1.17910 2.54673 1.01095 1.38535 59 g - - > 1.38629 1.38629 1.38629 1.38629 0.33194 4.27667 1.31461 1.46634 0.26236 1.09861 0.40547 46 2.85815 2.78057 3.38437 0.16638 60 U - - : 1.38629 1.38629 1.38629 1.38629 0.03798 3.98271 3.98271 1.46634 0.26236 3.06048 0.04800 47 0.95559 2.09425 2.23890 0.95276 61 u - - : 1.38629 1.38629 1.38629 1.38629 0.03798 3.98271 3.98271 1.46634 0.26236 3.06048 0.04800 48 2.07666 0.97142 2.64011 0.85624 62 u - - : 1.38629 1.38629 1.38629 1.38629 0.03798 3.98271 3.98271 1.46634 0.26236 3.06048 0.04800 49 0.11699 3.50086 3.20006 3.23201 63 A - - : 1.38629 1.38629 1.38629 1.38629 0.03798 3.98271 3.98271 1.46634 0.26236 3.06048 0.04800 50 0.97364 2.09213 2.24101 0.93517 64 u - - : 1.38629 1.38629 1.38629 1.38629 0.03798 3.98271 3.98271 1.46634 0.26236 3.06048 0.04800 51 0.83831 2.57599 0.97183 2.17957 65 a - - : 1.38629 1.38629 1.38629 1.38629 0.39893 1.17013 3.98271 2.54003 0.08215 0.09842 2.36733 52 2.45149 1.31187 3.00872 0.51892 79 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 53 1.29446 2.33704 2.57059 0.59267 80 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 54 3.51198 4.47878 0.06085 4.02576 81 G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 55 3.42204 3.25762 3.96155 0.09449 82 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 56 0.06374 4.08042 3.73381 3.86553 83 A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 57 2.19543 0.63746 1.47896 2.02358 84 C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 58 0.60231 2.40146 2.49334 1.27570 85 A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 59 2.13928 2.65895 0.57067 1.39798 86 G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 60 1.23027 1.60024 2.34344 0.89174 87 u - - : 1.38629 1.38629 1.38629 1.38629 0.28127 4.27667 1.46408 1.46634 0.26236 1.09861 0.40547 61 1.01251 2.11816 2.27766 0.88209 88 u - - : 1.38629 1.38629 1.38629 1.38629 0.03614 4.03153 4.03153 1.46634 0.26236 0.11342 2.23285 62 0.90158 2.28587 1.33457 1.47353 89 a - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 63 0.50447 2.96490 1.30171 2.62361 90 A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 64 3.42204 3.25762 3.96155 0.09449 91 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 65 0.32057 2.03821 2.80140 2.48556 92 A - - : 1.38629 1.38629 1.38629 1.38629 0.01418 4.26268 * 1.46634 0.26236 0.00000 * //