INFERNAL1/a [1.1.5 | Sep 2023] NAME Rhino_CRE ACC RF00220 DESC Human rhinovirus internal cis-acting regulatory element (CRE) STATES 262 NODES 67 CLEN 86 W 103 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 12 14:15:01 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00220/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 12 EFFN 1.420898 CKSUM 2882485922 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 86.40 NC 42.80 EFP7GF -7.3443 0.71869 ECMLC 0.61633 -7.08271 2.55574 1600000 456120 0.002631 ECMGC 0.44471 -14.49543 -2.57189 1600000 80336 0.004979 ECMLI 0.60763 -3.93195 4.43409 1600000 193600 0.006198 ECMGI 0.48477 -8.91649 1.25352 1600000 55359 0.007226 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 103 123 -6.659 -7.904 -0.094 -4.358 IL 1 1 2 1 4 1 31 104 124 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 31 104 125 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 86 - A - - MR 3 2 3 5 3 1 31 103 123 -8.162 -0.021 -6.479 1.612 -1.958 -1.632 -1.463 D 4 2 3 5 3 0 26 101 121 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 31 103 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 85 - C - - MR 6 5 3 8 3 1 30 102 122 -8.162 -0.021 -6.479 -1.252 1.460 -2.053 -0.767 D 7 5 3 8 3 0 25 100 120 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 30 102 123 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 84 - a - - MR 9 8 3 11 3 1 29 101 121 -8.162 -0.021 -6.479 0.328 0.137 -0.944 0.170 D 10 8 3 11 3 0 25 99 119 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 29 101 122 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 83 - C - - MR 12 11 3 14 3 1 28 100 120 -8.162 -0.021 -6.479 -1.252 1.460 -2.053 -0.767 D 13 11 3 14 3 0 24 98 118 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 28 100 121 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 82 - A - - MR 15 14 3 17 3 1 27 99 119 -8.162 -0.021 -6.479 1.612 -1.958 -1.632 -1.463 D 16 14 3 17 3 0 23 97 117 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 27 99 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 81 - c - - MR 18 17 3 20 3 1 26 98 118 -8.162 -0.021 -6.479 -0.579 0.642 -1.349 0.462 D 19 17 3 20 3 0 22 96 116 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 26 98 119 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 80 - A - - MR 21 20 3 23 3 1 26 97 117 -8.162 -0.021 -6.479 1.612 -1.958 -1.632 -1.463 D 22 20 3 23 3 0 21 95 115 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 25 97 118 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 79 - c - - MR 24 23 3 26 3 1 25 96 116 -8.162 -0.021 -6.479 -0.727 0.989 -1.515 0.085 D 25 23 3 26 3 0 20 94 114 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 24 96 117 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 78 - A - - MR 27 26 3 29 3 1 24 95 115 -8.162 -0.021 -6.479 1.379 -1.517 -0.865 -0.996 D 28 26 3 29 3 0 19 93 113 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 23 95 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 77 - A - - MR 30 29 3 32 3 1 23 94 114 -8.162 -0.021 -6.479 1.612 -1.958 -1.632 -1.463 D 31 29 3 32 3 0 18 92 112 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 23 94 115 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 76 - A - - MR 33 32 3 35 3 1 22 93 113 -8.162 -0.021 -6.479 1.612 -1.958 -1.632 -1.463 D 34 32 3 35 3 0 17 91 111 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 22 93 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 75 - a - - MR 36 35 3 38 5 1 21 92 112 -6.914 -0.044 -6.729 -6.941 -7.833 0.738 -0.580 -0.905 0.176 D 37 35 3 38 5 0 16 90 111 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 20 92 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 1 74 G C - - MP 39 38 3 43 6 2 21 91 111 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -4.340 -2.905 -4.411 0.460 -4.667 -4.530 -0.128 -4.618 -4.053 3.525 -4.421 -0.593 -0.526 -4.201 -2.146 -3.294 ML 40 38 3 43 6 1 17 90 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 15 90 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 13 88 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 19 90 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 18 90 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 2 73 G C - - MP 45 44 6 49 4 2 19 89 109 -6.723 -6.930 -0.062 -5.344 -3.827 -2.614 -3.876 0.854 -4.341 -4.383 0.142 -4.179 -3.746 3.280 -4.156 0.486 -0.163 -3.833 -1.837 -2.781 ML 46 44 6 49 4 1 16 89 109 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 4 1 14 88 109 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 48 44 6 49 4 0 12 87 108 -4.568 -4.250 -2.265 -0.520 IL 49 49 5 49 4 1 18 90 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 50 50 6 50 3 1 17 89 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 3 - u - - - ML 51 50 6 53 3 1 18 86 106 -8.162 -0.021 -6.479 -0.137 0.188 -0.746 0.439 D 52 50 6 53 3 0 12 85 105 -5.620 -0.734 -1.403 IL 53 53 3 53 3 1 16 87 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 72 - a - - MR 54 53 3 56 5 1 17 85 105 -6.914 -0.044 -6.729 -6.941 -7.833 0.565 -0.741 -0.613 0.343 D 55 53 3 56 5 0 10 84 104 -5.352 -0.707 -2.978 -4.409 -2.404 IR 56 56 3 56 5 1 14 86 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 4 71 c g - - MP 57 56 3 61 6 2 18 84 104 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -3.479 -3.447 -3.347 0.175 -2.321 -3.889 2.482 -3.034 -3.382 0.437 -3.756 -1.530 1.251 -3.615 2.027 -2.285 ML 58 56 3 61 6 1 12 83 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 3 61 6 1 11 83 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 3 61 6 0 6 80 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 13 84 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 14 84 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 5 70 u g - - MP 63 62 6 67 6 2 18 82 102 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -3.682 -3.584 -3.477 0.039 -2.371 -3.971 1.903 -3.101 -3.513 0.307 -3.849 -1.598 1.117 -3.804 2.690 -2.406 ML 64 62 6 67 6 1 11 81 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 11 81 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 6 78 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 13 82 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 13 82 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 6 69 c g - - MP 69 68 6 73 6 2 17 80 100 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -1.668 -1.790 -1.855 1.417 -1.318 -2.690 1.549 -2.171 -0.720 1.321 -2.474 -0.137 1.370 -1.988 0.021 -0.520 ML 70 68 6 73 6 1 11 79 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 10 79 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 6 76 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 12 80 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 13 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 7 68 G C - - MP 75 74 6 79 6 2 16 78 98 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -3.345 0.226 -3.416 0.995 -3.763 -4.036 0.429 -3.752 -3.396 3.051 -3.826 -0.185 0.149 -3.422 -1.444 -2.409 ML 76 74 6 79 6 1 10 77 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 10 77 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 5 74 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 12 78 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 12 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 8 67 a u - - MP 81 80 6 85 6 2 15 76 96 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -2.545 -1.987 -2.712 1.815 -2.847 -3.536 1.017 -2.951 -1.113 1.801 -3.149 1.459 0.754 -2.866 -0.748 -1.741 ML 82 80 6 85 6 1 10 75 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 9 75 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 5 72 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 11 76 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 11 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 9 66 u a - - MP 87 86 6 91 6 2 14 74 94 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -1.319 -2.080 -2.195 1.183 -2.045 -3.028 1.636 -2.438 -2.248 1.300 -2.797 -0.449 1.944 -2.329 -0.073 -0.583 ML 88 86 6 91 6 1 9 73 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 8 73 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 4 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 10 74 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 10 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 10 65 G C - - MP 93 92 6 97 6 2 12 72 92 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -4.340 -2.905 -4.411 0.460 -4.667 -4.530 -0.128 -4.618 -4.053 3.525 -4.421 -0.593 -0.526 -4.201 -2.146 -3.294 ML 94 92 6 97 6 1 8 71 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 7 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 4 69 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 9 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 9 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 11 64 a u - - MP 99 98 6 103 4 2 10 70 90 -6.723 -6.930 -0.062 -5.344 -1.358 -1.995 -0.588 2.097 -2.161 -3.008 1.288 -2.474 -2.233 1.454 -2.784 -0.338 1.097 -2.292 -0.282 -1.357 ML 100 98 6 103 4 1 7 70 91 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 4 1 5 70 90 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 102 98 6 103 4 0 4 69 89 -4.568 -4.250 -2.265 -0.520 IL 103 103 5 103 4 1 9 72 92 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 104 104 6 104 3 1 8 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 12 - U - - - ML 105 104 6 107 3 1 9 68 88 -7.757 -0.024 -6.411 -0.338 -0.531 -1.207 1.059 D 106 104 6 107 3 0 3 66 86 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 8 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 13 - G - - - ML 108 107 3 110 3 1 8 67 87 -7.757 -0.024 -6.411 -1.138 -2.282 1.597 -1.667 D 109 107 3 110 3 0 2 65 85 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 7 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 14 - A - - - ML 111 110 3 113 3 1 8 66 86 -7.757 -0.024 -6.411 1.612 -1.958 -1.632 -1.463 D 112 110 3 113 3 0 2 64 84 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 6 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 15 - A - - - ML 114 113 3 116 3 1 7 65 84 -7.757 -0.024 -6.411 1.198 -1.340 -0.446 -0.793 D 115 113 3 116 3 0 1 63 83 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 6 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 16 - U - - - ML 117 116 3 119 3 1 6 64 83 -7.757 -0.024 -6.411 -0.599 -0.085 -1.336 1.001 D 118 116 3 119 3 0 1 62 82 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 5 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 17 - U - - - ML 120 119 3 122 3 1 6 63 82 -7.757 -0.024 -6.411 -1.113 -1.177 -1.824 1.492 D 121 119 3 122 3 0 0 61 81 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 4 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 18 - a - - - ML 123 122 3 125 3 1 5 62 81 -7.757 -0.024 -6.411 0.957 -1.018 -0.402 -0.308 D 124 122 3 125 3 0 0 60 80 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 4 64 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 19 - G - - - ML 126 125 3 128 3 1 4 61 80 -7.757 -0.024 -6.411 -1.138 -2.282 1.597 -1.667 D 127 125 3 128 3 0 0 59 79 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 3 63 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 20 - A - - - ML 129 128 3 131 3 1 4 59 79 -7.757 -0.024 -6.411 1.612 -1.958 -1.632 -1.463 D 130 128 3 131 3 0 0 58 78 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 3 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 21 - a - - - ML 132 131 3 134 3 1 3 58 78 -8.162 -0.021 -6.479 0.738 -1.215 0.326 -0.625 D 133 131 3 134 3 0 0 57 77 -5.620 -0.734 -1.403 IL 134 134 3 134 3 1 2 59 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 63 - u - - MR 135 134 3 137 3 1 3 57 77 -8.162 -0.021 -6.479 -0.052 0.074 -1.028 0.578 D 136 134 3 137 3 0 0 56 75 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 58 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 62 - U - - MR 138 137 3 140 3 1 2 56 76 -8.162 -0.021 -6.479 -1.113 -1.177 -1.824 1.492 D 139 137 3 140 3 0 0 55 74 -6.390 -1.568 -0.620 IR 140 140 3 140 3 1 1 57 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 61 - a - - MR 141 140 3 143 3 1 2 55 75 -8.162 -0.021 -6.479 0.901 -1.220 0.087 -0.641 D 142 140 3 143 3 0 0 54 73 -6.390 -1.568 -0.620 IR 143 143 3 143 3 1 1 56 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 60 - a - - MR 144 143 3 146 5 1 1 54 74 -6.914 -0.044 -6.729 -6.941 -7.833 0.891 -0.649 -0.936 -0.022 D 145 143 3 146 5 0 0 53 73 -5.352 -0.707 -2.978 -4.409 -2.404 IR 146 146 3 146 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 22 59 G C - - MP 147 146 3 151 6 2 2 53 73 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -4.340 -2.905 -4.411 0.460 -4.667 -4.530 -0.128 -4.618 -4.053 3.525 -4.421 -0.593 -0.526 -4.201 -2.146 -3.294 ML 148 146 3 151 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 3 151 6 1 1 52 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 3 151 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 53 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 23 58 A U - - MP 153 152 6 157 4 2 2 51 71 -6.723 -6.930 -0.062 -5.344 -3.471 -2.590 -3.509 3.072 -3.691 -4.730 0.590 -3.569 -3.418 1.427 -3.949 -0.123 0.170 -3.970 -1.354 -2.365 ML 154 152 6 157 4 1 1 52 71 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 51 71 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 50 70 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 53 73 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 24 - A - - - ML 159 158 6 161 3 1 1 49 68 -8.162 -0.021 -6.479 1.378 -1.516 -0.863 -0.995 D 160 158 6 161 3 0 0 48 67 -5.620 -0.734 -1.403 IL 161 161 3 161 3 1 1 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 57 - u - - MR 162 161 3 164 5 1 1 48 67 -6.914 -0.044 -6.729 -6.941 -7.833 -0.558 0.134 -1.304 0.863 D 163 161 3 164 5 0 0 47 66 -5.352 -0.707 -2.978 -4.409 -2.404 IR 164 164 3 164 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 25 56 G C - - MP 165 164 3 169 6 2 2 47 66 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -4.340 -2.905 -4.411 0.460 -4.667 -4.530 -0.128 -4.618 -4.053 3.525 -4.421 -0.593 -0.526 -4.201 -2.146 -3.294 ML 166 164 3 169 6 1 1 45 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 3 169 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 3 169 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 26 55 u g - - MP 171 170 6 175 6 2 2 45 64 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -3.682 -3.584 -3.477 0.039 -2.371 -3.971 1.903 -3.101 -3.513 0.307 -3.849 -1.598 1.117 -3.804 2.690 -2.406 ML 172 170 6 175 6 1 1 43 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 27 54 c g - - MP 177 176 6 181 6 2 2 43 62 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -3.573 -3.472 -3.437 0.240 -2.388 -3.992 2.887 -3.097 -3.459 0.550 -3.836 -1.452 1.834 -3.700 -0.069 -2.330 ML 178 176 6 181 6 1 1 41 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 6 1 1 41 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 180 176 6 181 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 181 181 5 181 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 182 182 6 182 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 28 53 A U - - MP 183 182 6 187 6 2 2 41 60 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -3.471 -2.590 -3.509 3.072 -3.691 -4.730 0.590 -3.569 -3.418 1.427 -3.949 -0.123 0.170 -3.970 -1.354 -2.365 ML 184 182 6 187 6 1 1 39 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 185 182 6 187 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 186 182 6 187 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 187 187 5 187 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 188 188 6 188 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 29 52 c g - - MP 189 188 6 193 6 2 2 39 58 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -1.811 -1.889 -1.989 1.129 -1.892 -2.803 1.593 -2.271 -2.043 1.259 -2.587 -0.377 1.360 -1.021 0.667 0.201 ML 190 188 6 193 6 1 1 37 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 6 193 6 1 1 37 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 6 193 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 30 51 c g - - MP 195 194 6 199 6 2 2 37 56 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -2.235 -2.276 -1.392 1.005 -2.099 -3.196 2.052 -2.542 -2.422 1.230 -2.962 -0.580 1.818 -2.518 -0.037 -0.927 ML 196 194 6 199 6 1 1 35 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 6 1 1 35 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 6 199 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 31 50 G C - - MP 201 200 6 205 6 2 2 35 54 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -4.340 -2.905 -4.411 0.460 -4.667 -4.530 -0.128 -4.618 -4.053 3.525 -4.421 -0.593 -0.526 -4.201 -2.146 -3.294 ML 202 200 6 205 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 1 33 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 31 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 32 49 U A - - MP 207 206 6 211 6 2 2 33 52 -9.026 -8.965 -0.022 -7.741 -8.021 -8.416 -3.784 -3.591 -3.664 0.082 -2.699 -4.264 1.618 -3.364 -3.674 0.408 -4.067 -1.501 3.090 -3.948 -0.386 -2.535 ML 208 206 6 211 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 210 206 6 211 6 0 0 30 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 211 211 5 211 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 1 32 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 33 48 c g - - MP 213 212 6 217 4 2 2 31 50 -6.723 -6.930 -0.062 -5.344 -3.460 -3.419 -3.342 0.220 -2.327 -3.898 2.679 -3.033 -3.371 0.481 -3.753 -1.484 1.277 -3.602 1.642 -2.270 ML 214 212 6 217 4 1 1 31 51 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 215 212 6 217 4 1 1 31 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 216 212 6 217 4 0 0 30 49 -4.568 -4.250 -2.265 -0.520 IL 217 217 5 217 4 1 1 33 52 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 218 218 6 218 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 34 - G - - - ML 219 218 6 221 3 1 1 28 47 -7.757 -0.024 -6.411 -1.138 -2.282 1.597 -1.667 D 220 218 6 221 3 0 0 27 46 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 35 - A - - - ML 222 221 3 224 3 1 1 27 46 -7.757 -0.024 -6.411 1.612 -1.958 -1.632 -1.463 D 223 221 3 224 3 0 0 26 45 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 36 - G - - - ML 225 224 3 227 3 1 1 26 45 -7.757 -0.024 -6.411 -0.430 -1.773 1.333 -1.166 D 226 224 3 227 3 0 0 25 44 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 37 - A - - - ML 228 227 3 230 3 1 1 25 44 -7.757 -0.024 -6.411 1.612 -1.958 -1.632 -1.463 D 229 227 3 230 3 0 0 24 43 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 38 - A - - - ML 231 230 3 233 3 1 1 24 43 -7.757 -0.024 -6.411 1.612 -1.958 -1.632 -1.463 D 232 230 3 233 3 0 0 23 42 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 39 - A - - - ML 234 233 3 236 3 1 1 23 41 -7.757 -0.024 -6.411 1.612 -1.958 -1.632 -1.463 D 235 233 3 236 3 0 0 21 40 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 40 - A - - - ML 237 236 3 239 3 1 1 21 40 -7.757 -0.024 -6.411 1.612 -1.958 -1.632 -1.463 D 238 236 3 239 3 0 0 20 39 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 41 - C - - - ML 240 239 3 242 3 1 1 20 39 -7.757 -0.024 -6.411 -1.252 1.460 -2.053 -0.767 D 241 239 3 242 3 0 0 19 38 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 42 - G - - - ML 243 242 3 245 3 1 1 19 38 -7.757 -0.024 -6.411 -1.138 -2.282 1.597 -1.667 D 244 242 3 245 3 0 0 18 37 -6.174 -1.687 -0.566 IL 245 245 3 245 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 43 - A - - - ML 246 245 3 248 3 1 1 18 36 -7.757 -0.024 -6.411 1.612 -1.958 -1.632 -1.463 D 247 245 3 248 3 0 0 17 36 -6.174 -1.687 -0.566 IL 248 248 3 248 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 44 - A - - - ML 249 248 3 251 3 1 1 16 35 -7.757 -0.024 -6.411 1.201 -1.342 -0.453 -0.796 D 250 248 3 251 3 0 0 16 34 -6.174 -1.687 -0.566 IL 251 251 3 251 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 45 - A - - - ML 252 251 3 254 3 1 1 15 33 -7.757 -0.024 -6.411 1.612 -1.958 -1.632 -1.463 D 253 251 3 254 3 0 0 15 33 -6.174 -1.687 -0.566 IL 254 254 3 254 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 46 - C - - - ML 255 254 3 257 3 1 1 13 32 -7.757 -0.024 -6.411 -1.252 1.460 -2.053 -0.767 D 256 254 3 257 3 0 0 13 32 -6.174 -1.687 -0.566 IL 257 257 3 257 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 47 - A - - - ML 258 257 3 260 2 1 1 1 1 * 0.000 1.612 -1.958 -1.632 -1.463 D 259 257 3 260 2 0 0 0 0 * 0.000 IL 260 260 3 260 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 66 ] - - - - - - E 261 260 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Rhino_CRE ACC RF00220 DESC Human rhinovirus internal cis-acting regulatory element (CRE) LENG 86 MAXL 178 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 12 14:15:01 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00220/CM NSEQ 12 EFFN 2.112305 CKSUM 2882485922 STATS LOCAL MSV -9.1928 0.71869 STATS LOCAL VITERBI -9.8325 0.71869 STATS LOCAL FORWARD -3.7360 0.71869 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.15650 1.51495 1.38499 1.53588 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 0.00000 * 1 2.50995 3.11984 0.18914 3.05994 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 2 2.15293 2.81387 0.27970 2.69011 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 3 1.53701 1.19553 1.94740 1.07943 3 u - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 4 2.66728 0.96580 2.44271 0.77012 4 u - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 5 2.83700 1.52216 2.61293 0.43103 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 6 1.47995 1.49047 1.33217 1.26168 6 u - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 7 1.53352 2.60226 0.46955 2.46706 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 8 1.28464 2.09405 0.78294 1.94491 8 g - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 9 1.60361 1.50358 1.57960 0.99306 9 u - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 10 2.51172 3.12183 0.18870 3.06274 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 11 0.97264 1.72745 1.47669 1.53345 11 a - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 12 1.72975 1.82879 2.38042 0.56291 12 U - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 13 2.58238 3.44344 0.17009 3.01882 13 G - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 14 0.17537 3.12563 2.86095 2.81792 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 15 0.47527 2.50094 1.72357 2.13837 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 16 1.96715 1.43795 2.49141 0.61630 16 U - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 17 2.50406 2.48620 3.01687 0.24071 17 U - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 18 0.66412 2.19386 1.68434 1.67013 18 A - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 19 2.58238 3.44344 0.17009 3.01882 19 G - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 20 0.17537 3.12563 2.86095 2.81792 20 A - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 21 0.82665 2.38840 1.09864 1.98495 21 a - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 22 2.51059 3.12055 0.18898 3.06094 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 23 0.39205 2.63629 1.73493 2.57323 23 A - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 24 0.34294 2.66474 2.09258 2.32961 24 A - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 25 2.51152 3.12160 0.18875 3.06242 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 26 2.83703 1.52216 2.61294 0.43103 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 27 2.55232 0.65153 2.29131 1.20492 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 28 0.39194 2.63662 1.73498 2.57371 28 A - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 29 1.71606 1.52073 1.58920 0.92234 29 u - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 30 1.74080 1.21613 1.66381 1.08226 30 u - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 31 2.51173 3.12183 0.18870 3.06274 31 G - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 32 2.84355 1.81172 2.58061 0.35285 32 U - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 33 2.60691 0.79890 2.37838 0.95785 33 c - - < 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 34 2.58238 3.44344 0.17009 3.01882 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 35 0.17537 3.12563 2.86095 2.81792 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 36 1.85366 2.91135 0.34655 2.50334 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 37 0.17537 3.12563 2.86095 2.81792 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 38 0.17537 3.12563 2.86095 2.81792 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 39 0.17537 3.12563 2.86095 2.81792 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 40 0.17537 3.12563 2.86095 2.81792 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 41 2.70853 0.23140 3.28258 2.27873 41 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 42 2.58238 3.44344 0.17009 3.01882 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 43 0.17537 3.12563 2.86095 2.81792 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 44 0.47287 2.50305 1.72930 2.14092 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 45 0.17537 3.12563 2.86095 2.81792 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 46 2.70853 0.23140 3.28258 2.27873 46 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 47 0.17537 3.12563 2.86095 2.81792 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 48 1.88169 2.53982 0.39205 2.37387 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 49 0.40067 2.76235 1.64861 2.59469 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 50 3.26990 0.22247 2.95470 2.21315 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 51 1.29800 1.82854 1.02333 1.57562 51 g - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 52 1.59148 1.62324 1.13791 1.27787 52 g - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 53 2.80376 2.01615 2.45017 0.32854 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 54 1.37644 2.45660 0.57441 2.31502 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 55 2.05197 2.79100 0.30821 2.58502 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 56 3.28702 0.22075 2.96199 2.21642 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 57 1.92609 1.25032 2.45891 0.72910 57 u - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 58 2.80716 2.01650 2.45138 0.32805 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 59 3.28615 0.22083 2.96162 2.21625 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 60 0.70346 1.88208 2.14381 1.44541 60 a - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 61 0.69928 2.39327 1.28643 1.99901 61 a - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 62 2.50406 2.48620 3.01687 0.24071 62 U - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 63 1.46184 1.28652 2.19964 0.96464 63 u - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 64 1.68459 1.63990 1.35532 1.01441 64 u - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 65 3.26989 0.22247 2.95470 2.21315 65 C - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 66 1.17246 1.74352 1.31132 1.40232 66 a - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 67 1.94271 1.52891 1.89903 0.71294 67 u - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 68 2.69906 0.39767 2.41569 1.76294 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 69 1.38294 1.64716 1.32902 1.23160 69 u - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 70 2.05196 2.79099 0.30821 2.58501 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 71 1.91653 2.60580 0.36858 2.43810 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 72 0.96219 1.97284 1.84905 1.13478 72 a - - - 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 73 2.92259 0.39698 2.63500 1.59880 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 74 3.28556 0.22089 2.96137 2.21614 74 C - - > 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 75 0.82186 1.82830 2.10684 1.27986 75 a - - : 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 76 0.17537 3.12563 2.86095 2.81792 76 A - - : 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 77 0.17537 3.12563 2.86095 2.81792 77 A - - : 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 78 0.34233 2.66577 2.09459 2.33077 78 A - - : 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 79 2.11028 0.57368 2.68173 1.39876 79 C - - : 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 80 0.17537 3.12563 2.86095 2.81792 80 A - - : 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 81 1.95089 0.84016 2.50778 1.06490 81 c - - : 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 82 0.17537 3.12563 2.86095 2.81792 82 A - - : 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 83 2.70853 0.23140 3.28258 2.27873 83 C - - : 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 84 1.14771 1.23385 2.13443 1.29771 84 a - - : 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 85 2.70853 0.23140 3.28258 2.27873 85 C - - : 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 1.09861 0.40547 86 0.17537 3.12563 2.86095 2.81792 86 A - - : 1.38629 1.38629 1.38629 1.38629 0.02201 3.82715 * 1.46634 0.26236 0.00000 * //