INFERNAL1/a [1.1.5 | Sep 2023] NAME K10_TLS ACC RF00207 DESC K10 transport/localisation element (TLS) STATES 148 NODES 31 CLEN 48 W 62 ALPH RNA RF no CONS yes MAP yes DATE Fri Aug 16 17:12:26 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/3Dupdates/RF00207/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 10 EFFN 3.237305 CKSUM 2594861883 NULL 0.000 0.000 0.000 0.000 GA 43.00 TC 43.00 NC 42.40 EFP7GF -12.2859 0.71958 ECMLC 0.70010 -3.69018 4.63808 1600000 408692 0.002936 ECMGC 0.42662 -15.19147 1.06535 1600000 411254 0.000973 ECMLI 0.66210 -3.18594 5.34176 1600000 339853 0.003531 ECMGI 0.47000 -11.33428 2.72545 1600000 296422 0.001349 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 62 81 -9.299 -9.238 -0.215 -8.014 -8.294 -2.967 IL 1 1 2 1 6 1 1 64 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 1 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 48 G C - - MP 3 2 3 7 6 2 4 62 81 -9.105 -9.045 -0.021 -7.821 -8.101 -8.496 -4.735 -3.091 -4.834 0.204 -5.224 -4.691 -0.590 -5.076 -4.324 3.637 -4.661 -0.790 -0.975 -4.464 -2.627 -3.711 ML 4 2 3 7 6 1 1 60 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 1 60 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 0 58 77 -10.825 -9.523 -5.320 -6.003 -6.020 -0.086 IL 7 7 5 7 6 1 1 62 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 1 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 47 G C - - MP 9 8 6 13 6 2 2 60 79 -9.105 -9.045 -0.021 -7.821 -8.101 -8.496 -4.735 -3.091 -4.834 0.204 -5.224 -4.691 -0.590 -5.076 -4.324 3.637 -4.661 -0.790 -0.975 -4.464 -2.627 -3.711 ML 10 8 6 13 6 1 1 58 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 1 58 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 0 57 76 -10.825 -9.523 -0.448 -6.003 -6.020 -2.095 IL 13 13 5 13 6 1 1 60 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 1 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 46 C G - - MP 15 14 6 19 6 2 2 58 77 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -3.705 -3.400 -3.700 0.328 -2.909 -4.457 3.020 -3.473 -3.656 0.601 -4.119 0.674 0.960 -3.942 -0.552 -2.542 ML 16 14 6 19 6 1 1 56 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 1 56 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 54 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 1 58 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 45 u a - - MP 21 20 6 25 6 2 2 56 75 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -3.679 -3.354 -3.670 0.362 -2.942 -4.430 1.451 -3.488 -3.648 1.522 -4.113 -1.155 2.828 -3.898 -0.592 -2.534 ML 22 20 6 25 6 1 1 54 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 1 54 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 52 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 1 56 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 44 u a - - MP 27 26 6 31 6 2 2 54 73 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -3.912 -3.899 -3.806 -0.165 -2.756 -4.392 1.912 -3.466 -3.813 0.009 -4.215 -1.916 2.841 -4.067 1.057 -2.695 ML 28 26 6 31 6 1 1 52 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 1 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 1 54 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 43 g u - - MP 33 32 6 37 6 2 2 52 71 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -3.550 -2.596 -3.664 0.848 -3.842 -4.542 0.514 -3.784 -3.550 1.786 -3.992 2.510 1.237 -3.882 -1.456 -2.515 ML 34 32 6 37 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 7 42 A U - - MP 39 38 6 43 6 2 2 50 69 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -3.892 -2.792 -3.965 3.109 -4.684 -5.308 -0.280 -4.149 -3.835 2.040 -4.376 -0.266 -0.557 -4.410 -2.217 -2.768 ML 40 38 6 43 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 8 41 u a - - MP 45 44 6 49 6 2 2 48 67 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -3.450 -3.114 -3.508 0.537 -2.981 -4.390 1.341 -3.422 -3.464 0.776 -3.975 0.738 2.813 -3.759 -0.673 -2.400 ML 46 44 6 49 6 1 1 47 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 48 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 9 40 U A - - MP 51 50 6 55 4 2 2 46 65 -7.288 -8.533 -0.060 -4.987 -5.305 -5.144 -5.011 -1.379 -3.746 -5.469 0.591 -4.508 -5.009 -1.251 -5.326 -3.012 3.678 -5.400 -1.396 -3.684 ML 52 50 6 55 4 1 1 45 64 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 4 1 1 45 64 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 54 50 6 55 4 0 0 43 62 -12.737 -14.007 -2.036 -0.404 IL 55 55 5 55 4 1 1 45 64 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 56 56 6 56 3 1 1 46 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 39 - A - - MR 57 56 6 59 5 1 1 44 63 -7.473 -0.030 -7.288 -7.501 -8.392 1.852 -3.234 -2.783 -2.865 D 58 56 6 59 5 0 0 42 61 -5.352 -0.707 -2.978 -4.409 -2.404 IR 59 59 3 59 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 10 38 G C - - MP 60 59 3 64 6 2 2 43 62 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -5.569 -3.499 -5.797 -0.380 -6.383 -5.002 -1.542 -6.063 -4.827 3.786 -5.113 -1.242 -1.910 -4.998 -3.633 -4.662 ML 61 59 3 64 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 3 64 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 3 64 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 11 37 U A - - MP 66 65 6 70 6 2 2 41 60 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -5.305 -5.144 -5.011 -1.379 -3.746 -5.469 0.591 -4.508 -5.009 -1.251 -5.326 -3.012 3.678 -5.400 -1.396 -3.684 ML 67 65 6 70 6 1 1 40 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 12 36 A U - - MP 72 71 6 76 4 2 2 39 58 -7.288 -8.533 -0.060 -4.987 -4.612 -3.463 -4.536 3.681 -5.335 -6.505 -0.978 -4.521 -4.435 0.185 -5.021 -0.831 -1.388 -5.528 -2.914 -3.350 ML 73 71 6 76 4 1 1 38 57 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 4 1 1 38 57 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 75 71 6 76 4 0 0 36 55 -12.737 -14.007 -2.036 -0.404 IL 76 76 5 76 4 1 1 38 57 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 1 39 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 35 - C - - MR 78 77 6 80 5 1 1 37 56 -7.473 -0.030 -7.288 -7.501 -8.392 -2.781 1.816 -3.599 -1.997 D 79 77 6 80 5 0 0 35 54 -5.352 -0.707 -2.978 -4.409 -2.404 IR 80 80 3 80 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 13 34 U A - - MP 81 80 3 85 6 2 2 36 55 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -5.305 -5.144 -5.011 -1.379 -3.746 -5.469 0.591 -4.508 -5.009 -1.251 -5.326 -3.012 3.678 -5.400 -1.396 -3.684 ML 82 80 3 85 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 3 85 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 3 85 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 14 33 U A - - MP 87 86 6 91 6 2 2 34 53 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -3.828 -3.532 -3.792 0.204 -2.971 -4.527 1.421 -3.552 -3.763 1.169 -4.215 -1.328 3.007 -4.052 -0.622 -2.641 ML 88 86 6 91 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 15 32 U A - - MP 93 92 6 97 6 2 2 32 51 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -3.890 -3.616 -3.848 0.830 -3.006 -4.587 1.364 -3.592 -3.812 0.304 -4.262 -1.413 3.106 -4.137 -0.670 -2.697 ML 94 92 6 97 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 16 31 U A - - MP 99 98 6 103 6 2 2 30 49 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -3.828 -3.532 -3.792 0.204 -2.971 -4.527 1.421 -3.552 -3.763 1.169 -4.215 -1.328 3.007 -4.052 -0.622 -2.641 ML 100 98 6 103 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 17 30 U A - - MP 105 104 6 109 6 2 2 28 47 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -5.305 -5.144 -5.011 -1.379 -3.746 -5.469 0.591 -4.508 -5.009 -1.251 -5.326 -3.012 3.678 -5.400 -1.396 -3.684 ML 106 104 6 109 6 1 1 27 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 18 29 A U - - MP 111 110 6 115 6 2 2 26 45 -9.299 -9.238 -0.018 -8.014 -8.294 -8.689 -4.612 -3.463 -4.536 3.681 -5.335 -6.505 -0.978 -4.521 -4.435 0.185 -5.021 -0.831 -1.388 -5.528 -2.914 -3.350 ML 112 110 6 115 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 24 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 26 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 19 28 A U - - MP 117 116 6 121 4 2 2 24 43 -7.404 -7.611 -0.039 -6.025 -4.612 -3.463 -4.536 3.681 -5.335 -6.505 -0.978 -4.521 -4.435 0.185 -5.021 -0.831 -1.388 -5.528 -2.914 -3.350 ML 118 116 6 121 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 120 116 6 121 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 121 121 5 121 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 122 122 6 122 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 20 - A - - - ML 123 122 6 125 3 1 1 21 40 -8.392 -0.015 -7.046 1.852 -3.234 -2.783 -2.865 D 124 122 6 125 3 0 0 20 39 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 21 - U - - - ML 126 125 3 128 3 1 1 20 38 -8.392 -0.015 -7.046 -2.300 -2.159 -3.064 1.788 D 127 125 3 128 3 0 0 19 38 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 22 - U - - - ML 129 128 3 131 3 1 1 18 37 -8.392 -0.015 -7.046 -2.300 -2.159 -3.064 1.788 D 130 128 3 131 3 0 0 18 37 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 23 - A - - - ML 132 131 3 134 3 1 1 17 36 -8.392 -0.015 -7.046 1.852 -3.234 -2.783 -2.865 D 133 131 3 134 3 0 0 17 35 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 24 - A - - - ML 135 134 3 137 3 1 1 16 34 -8.392 -0.015 -7.046 1.852 -3.234 -2.783 -2.865 D 136 134 3 137 3 0 0 16 34 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 25 - U - - - ML 138 137 3 140 3 1 1 14 33 -8.392 -0.015 -7.046 -2.300 -2.159 -3.064 1.788 D 139 137 3 140 3 0 0 15 33 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 26 - U - - - ML 141 140 3 143 3 1 1 13 31 -8.392 -0.015 -7.046 -2.300 -2.159 -3.064 1.788 D 142 140 3 143 3 0 0 13 32 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 27 - C - - - ML 144 143 3 146 2 1 1 1 1 * 0.000 -2.781 1.816 -3.599 -1.997 D 145 143 3 146 2 0 0 0 0 * 0.000 IL 146 146 3 146 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 30 ] - - - - - - E 147 146 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME K10_TLS ACC RF00207 DESC K10 transport/localisation element (TLS) LENG 48 MAXL 121 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Aug 16 17:12:27 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/3Dupdates/RF00207/CM NSEQ 10 EFFN 5.395508 CKSUM 2594861883 STATS LOCAL MSV -7.1970 0.71958 STATS LOCAL VITERBI -7.8769 0.71958 STATS LOCAL FORWARD -3.6363 0.71958 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.10628 1.81865 1.89103 1.03268 1.38629 1.38629 1.38629 1.38629 0.36793 4.34165 1.22139 1.46634 0.26236 0.00000 * 1 2.85185 3.64162 0.11821 3.59194 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03692 4.01063 4.01063 1.46634 0.26236 3.20486 0.04141 2 2.83221 3.61472 0.12147 3.55508 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03692 4.01063 4.01063 1.46634 0.26236 0.08461 2.51171 3 2.80025 0.46407 1.67025 2.10140 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 4 2.69578 1.99181 1.60453 0.51906 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 5 3.13540 1.54195 2.93750 0.37171 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 6 2.33788 2.88224 0.40039 1.72933 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 7 0.41420 3.49766 1.30491 3.27907 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 8 2.58613 2.18431 1.57192 0.50337 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 9 4.29134 3.02972 4.19742 0.08018 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 10 3.26797 4.20399 0.07131 4.14742 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 11 4.29855 3.03066 4.20175 0.07995 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 12 0.09967 4.09586 2.83102 3.94907 12 A - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 13 4.29189 3.02979 4.19775 0.08016 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 14 2.82638 2.02814 1.88090 0.42047 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 15 2.13323 2.10044 2.66919 0.37130 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 16 2.82808 2.02832 1.88107 0.42024 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 17 4.31792 3.03316 4.21331 0.07935 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 18 0.09946 4.09927 2.83190 3.95324 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 19 0.09950 4.09869 2.83175 3.95253 19 A - - < 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 20 0.05185 4.28152 3.92314 4.07881 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 21 3.61884 3.42826 4.16175 0.07779 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 22 3.61884 3.42826 4.16175 0.07779 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 23 0.05185 4.28152 3.92314 4.07881 23 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 24 0.05185 4.28152 3.92314 4.07881 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 25 3.61884 3.42826 4.16175 0.07779 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 26 3.61884 3.42826 4.16175 0.07779 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 27 4.04212 0.06329 4.53676 3.40955 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 28 4.15317 3.22985 3.90278 0.07846 28 U - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 29 4.15559 3.23032 3.90399 0.07838 29 U - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 30 0.09057 4.41284 2.86270 4.05394 30 A - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 31 0.46004 1.98502 1.86752 2.56585 31 A - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 32 0.40625 2.90621 1.93916 1.99988 32 A - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 33 0.45963 1.98535 1.86787 2.56791 33 A - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 34 0.08937 4.44059 2.86796 4.08088 34 A - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 35 4.04212 0.06329 4.53676 3.40955 35 C - - - 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 36 4.16612 3.23238 3.90928 0.07799 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 37 0.09004 4.42511 2.86504 4.06586 37 A - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 38 4.34243 0.08394 4.11503 2.97229 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 39 0.05185 4.28152 3.92314 4.07881 39 A - - - 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 40 0.09159 4.38976 2.85824 4.03151 40 A - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 41 0.54082 2.60292 2.01852 1.55674 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 42 3.47724 1.44405 3.28735 0.36271 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 43 1.79825 1.70753 2.69758 0.53490 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 44 0.60683 3.10257 1.03509 2.90410 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 45 0.56493 1.69343 1.83040 2.43766 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.02637 4.34165 4.34165 1.46634 0.26236 1.09861 0.40547 46 2.35250 2.76182 0.42608 1.66797 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.36793 4.34165 1.22139 1.46634 0.26236 1.09861 0.40547 47 3.74814 0.14519 3.46083 2.52347 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03692 4.01063 4.01063 1.46634 0.26236 3.20486 0.04141 48 3.80327 0.14191 3.48641 2.53335 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.01863 3.99235 * 1.46634 0.26236 0.00000 * //