INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD95 ACC RF00189 DESC Small nucleolar RNA SNORD95 STATES 208 NODES 66 CLEN 68 W 85 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 16 20:20:06 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00189/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 7 EFFN 1.917480 CKSUM 114941803 NULL 0.000 0.000 0.000 0.000 GA 55.00 TC 56.10 NC 54.90 EFP7GF -9.0708 0.71886 ECMLC 0.69470 -5.69267 2.46697 1600000 347519 0.003453 ECMGC 0.39490 -19.55266 -5.62709 1600000 97795 0.004090 ECMLI 0.67033 -3.73888 3.95997 1600000 209151 0.005737 ECMGI 0.41859 -14.63405 -2.22506 1600000 72093 0.005548 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 85 105 -6.943 -7.150 -0.053 -5.564 IL 1 1 2 1 4 1 25 88 109 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 24 88 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 1 24 85 105 -7.960 -0.021 -6.614 0.076 0.231 -0.157 -0.193 D 4 2 3 5 3 0 19 83 104 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 23 87 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - c - - - ML 6 5 3 8 3 1 23 84 104 -7.960 -0.021 -6.614 0.025 0.232 -0.093 -0.200 D 7 5 3 8 3 0 18 82 103 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 23 86 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 1 22 83 103 -7.960 -0.133 -3.574 0.762 -1.384 0.429 -0.798 D 10 8 3 11 3 0 18 81 102 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 23 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - a - - - ML 12 11 3 14 5 1 23 82 102 -6.994 -0.042 -6.809 -7.021 -7.913 0.891 -1.290 0.170 -0.710 D 13 11 3 14 5 0 17 81 101 -5.427 -0.533 -4.688 -3.063 -2.976 IL 14 14 3 14 5 1 20 82 102 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 68 C G - - MP 15 14 3 19 6 2 23 81 101 -9.106 -9.045 -0.021 -7.821 -8.101 -8.496 -4.547 -4.452 -4.237 -0.684 -2.955 -4.649 3.550 -3.765 -4.286 -0.444 -4.547 -2.399 0.559 -4.616 -0.662 -3.126 ML 16 14 3 19 6 1 18 79 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 17 79 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 13 77 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 19 80 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 19 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 67 a u - - MP 21 20 6 25 6 2 21 79 99 -9.106 -9.045 -0.021 -7.821 -8.101 -8.496 -3.322 -2.383 -3.428 2.688 -3.967 -4.698 0.254 -3.615 -3.312 1.607 -3.858 1.577 -0.004 -3.830 -1.633 -2.281 ML 22 20 6 25 6 1 17 77 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 16 77 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 12 75 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 18 78 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 18 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 7 66 G C - - MP 27 26 6 31 6 2 20 77 97 -9.106 -9.045 -0.021 -7.821 -8.101 -8.496 -3.958 -0.647 -3.990 0.702 -4.540 -4.350 -0.092 -4.397 -3.902 3.386 -4.273 -0.430 -0.374 -3.838 -2.036 -2.954 ML 28 26 6 31 6 1 16 76 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 14 76 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 12 74 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 17 76 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 17 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 8 65 U G - - MP 33 32 6 37 4 2 18 75 95 -6.943 -7.150 -0.053 -5.564 -4.084 -4.004 -3.788 -0.339 -2.547 -4.213 1.739 -3.319 -3.828 -0.145 -4.121 -2.005 0.891 -4.170 3.001 -2.699 ML 34 32 6 37 4 1 15 75 95 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 13 74 95 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 11 73 94 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 17 76 97 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 39 38 6 41 3 1 16 72 93 -7.960 -0.021 -6.614 -1.571 -2.790 1.721 -2.176 D 40 38 6 41 3 0 11 71 91 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 15 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 42 41 3 44 3 1 16 71 92 -7.960 -0.021 -6.614 1.717 -2.362 -1.995 -1.904 D 43 41 3 44 3 0 10 70 90 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 15 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 45 44 3 47 3 1 15 70 91 -7.960 -0.021 -6.614 -1.477 -1.475 -2.211 1.616 D 46 44 3 47 3 0 9 69 89 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 14 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - G - - - ML 48 47 3 50 3 1 14 69 89 -7.960 -0.021 -6.614 -1.571 -2.790 1.721 -2.176 D 49 47 3 50 3 0 8 68 88 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 13 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 51 50 3 53 3 1 13 68 88 -7.960 -0.021 -6.614 1.717 -2.362 -1.995 -1.904 D 52 50 3 53 3 0 8 67 87 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 12 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - C - - - ML 54 53 3 56 3 1 13 67 87 -7.960 -0.021 -6.614 -0.989 1.164 -1.806 -0.044 D 55 53 3 56 3 0 7 66 86 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 12 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - C - - - ML 57 56 3 59 3 1 12 66 86 -7.960 -0.021 -6.614 -0.989 1.164 -1.806 -0.044 D 58 56 3 59 3 0 6 65 85 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 11 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - a - - - ML 60 59 3 62 3 1 11 65 85 -7.960 -0.021 -6.614 0.679 0.185 -1.100 -0.331 D 61 59 3 62 3 0 5 64 84 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 10 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - C - - - ML 63 62 3 65 3 1 11 64 84 -7.960 -0.021 -6.614 -1.730 1.621 -2.554 -1.146 D 64 62 3 65 3 0 5 63 83 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 9 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 66 65 3 68 3 1 10 63 83 -7.960 -0.021 -6.614 1.717 -2.362 -1.995 -1.904 D 67 65 3 68 3 0 4 62 82 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - A - - - ML 69 68 3 71 3 1 9 62 82 -7.960 -0.021 -6.614 1.717 -2.362 -1.995 -1.904 D 70 68 3 71 3 0 3 61 81 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - C - - - ML 72 71 3 74 3 1 8 61 81 -7.960 -0.021 -6.614 -1.730 1.621 -2.554 -1.146 D 73 71 3 74 3 0 2 60 80 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - A - - - ML 75 74 3 77 3 1 8 60 80 -7.960 -0.021 -6.614 1.717 -2.362 -1.995 -1.904 D 76 74 3 77 3 0 2 58 79 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 7 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - U - - - ML 78 77 3 80 3 1 7 59 79 -7.960 -0.021 -6.614 -1.477 -1.475 -2.211 1.616 D 79 77 3 80 3 0 1 57 77 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - G - - - ML 81 80 3 83 3 1 7 58 78 -7.960 -0.021 -6.614 -1.571 -2.790 1.721 -2.176 D 82 80 3 83 3 0 0 56 76 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - C - - - ML 84 83 3 86 3 1 6 57 77 -7.960 -0.021 -6.614 -1.730 1.621 -2.554 -1.146 D 85 83 3 86 3 0 0 55 75 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - C - - - ML 87 86 3 89 3 1 5 56 76 -7.960 -0.021 -6.614 -1.730 1.621 -2.554 -1.146 D 88 86 3 89 3 0 0 54 74 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - A - - - ML 90 89 3 92 3 1 5 55 75 -7.960 -0.021 -6.614 1.717 -2.362 -1.995 -1.904 D 91 89 3 92 3 0 0 53 73 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - U - - - ML 93 92 3 95 3 1 4 54 73 -7.960 -0.021 -6.614 -1.477 -1.475 -2.211 1.616 D 94 92 3 95 3 0 0 52 72 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - C - - - ML 96 95 3 98 3 1 4 53 72 -7.960 -0.021 -6.614 -1.730 1.621 -2.554 -1.146 D 97 95 3 98 3 0 0 51 71 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - U - - - ML 99 98 3 101 3 1 3 52 71 -7.960 -0.021 -6.614 -1.477 -1.475 -2.211 1.616 D 100 98 3 101 3 0 0 50 70 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - G - - - ML 102 101 3 104 3 1 3 51 70 -7.960 -0.021 -6.614 -1.571 -2.790 1.721 -2.176 D 103 101 3 104 3 0 0 49 69 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - A - - - ML 105 104 3 107 3 1 2 49 69 -7.960 -0.021 -6.614 1.717 -2.362 -1.995 -1.904 D 106 104 3 107 3 0 0 48 68 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - G - - - ML 108 107 3 110 3 1 2 48 68 -7.960 -0.021 -6.614 -1.571 -2.790 1.721 -2.176 D 109 107 3 110 3 0 0 47 67 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - U - - - ML 111 110 3 113 3 1 2 47 67 -7.960 -0.021 -6.614 -1.477 -1.475 -2.211 1.616 D 112 110 3 113 3 0 0 46 66 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - u - - - ML 114 113 3 116 3 1 1 46 66 -7.960 -0.021 -6.614 -0.366 -0.920 0.255 0.587 D 115 113 3 116 3 0 0 45 65 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - g - - - ML 117 116 3 119 3 1 1 45 65 -7.960 -0.021 -6.614 -0.311 -0.556 0.651 -0.084 D 118 116 3 119 3 0 0 44 64 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - C - - - ML 120 119 3 122 3 1 1 44 64 -7.960 -0.021 -6.614 -1.730 1.621 -2.554 -1.146 D 121 119 3 122 3 0 0 43 62 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - u - - - ML 123 122 3 125 3 1 1 43 63 -7.960 -0.021 -6.614 -0.438 -0.356 -0.718 0.905 D 124 122 3 125 3 0 0 42 61 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - u - - - ML 126 125 3 128 3 1 1 42 61 -7.960 -0.021 -6.614 -0.046 -0.791 -0.597 0.842 D 127 125 3 128 3 0 0 41 60 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - U - - - ML 129 128 3 131 3 1 1 41 60 -7.960 -0.021 -6.614 -1.477 -1.475 -2.211 1.616 D 130 128 3 131 3 0 0 40 59 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - G - - - ML 132 131 3 134 3 1 1 40 59 -7.960 -0.021 -6.614 -1.571 -2.790 1.721 -2.176 D 133 131 3 134 3 0 0 39 58 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - C - - - ML 135 134 3 137 3 1 1 39 58 -7.960 -0.021 -6.614 -1.730 1.621 -2.554 -1.146 D 136 134 3 137 3 0 0 38 57 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - U - - - ML 138 137 3 140 3 1 1 38 57 -7.960 -0.021 -6.614 -1.477 -1.475 -2.211 1.616 D 139 137 3 140 3 0 0 36 56 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - G - - - ML 141 140 3 143 3 1 1 37 56 -7.960 -0.021 -6.614 -1.571 -2.790 1.721 -2.176 D 142 140 3 143 3 0 0 35 55 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - A - - - ML 144 143 3 146 3 1 1 36 55 -7.960 -0.021 -6.614 1.717 -2.362 -1.995 -1.904 D 145 143 3 146 3 0 0 34 54 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - A - - - ML 147 146 3 149 3 1 1 35 54 -7.960 -0.021 -6.614 1.717 -2.362 -1.995 -1.904 D 148 146 3 149 3 0 0 33 53 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - A - - - ML 150 149 3 152 3 1 1 33 53 -7.960 -0.021 -6.614 1.717 -2.362 -1.995 -1.904 D 151 149 3 152 3 0 0 32 52 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - U - - - ML 153 152 3 155 3 1 1 32 52 -7.960 -0.021 -6.614 -0.877 -0.397 -1.618 1.245 D 154 152 3 155 3 0 0 31 50 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - C - - - ML 156 155 3 158 3 1 1 31 50 -7.960 -0.021 -6.614 -1.730 1.621 -2.554 -1.146 D 157 155 3 158 3 0 0 30 49 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - C - - - ML 159 158 3 161 3 1 1 30 49 -7.960 -0.021 -6.614 -1.730 1.621 -2.554 -1.146 D 160 158 3 161 3 0 0 29 48 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - A - - - ML 162 161 3 164 3 1 1 29 48 -7.960 -0.021 -6.614 1.717 -2.362 -1.995 -1.904 D 163 161 3 164 3 0 0 28 47 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - G - - - ML 165 164 3 167 3 1 1 28 47 -7.960 -0.021 -6.614 -1.571 -2.790 1.721 -2.176 D 166 164 3 167 3 0 0 27 46 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - A - - - ML 168 167 3 170 3 1 1 27 46 -7.960 -0.021 -6.614 1.717 -2.362 -1.995 -1.904 D 169 167 3 170 3 0 0 26 45 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - G - - - ML 171 170 3 173 3 1 1 26 45 -7.960 -0.021 -6.614 -1.571 -2.790 1.721 -2.176 D 172 170 3 173 3 0 0 25 44 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - G - - - ML 174 173 3 176 3 1 1 25 44 -7.960 -0.021 -6.614 -1.571 -2.790 1.721 -2.176 D 175 173 3 176 3 0 0 24 43 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - C - - - ML 177 176 3 179 3 1 1 23 42 -7.960 -0.021 -6.614 -1.730 1.621 -2.554 -1.146 D 178 176 3 179 3 0 0 22 41 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - U - - - ML 180 179 3 182 3 1 1 22 41 -7.960 -0.021 -6.614 -1.477 -1.475 -2.211 1.616 D 181 179 3 182 3 0 0 21 40 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 57 - G - - - ML 183 182 3 185 3 1 1 21 40 -7.960 -0.021 -6.614 -1.571 -2.790 1.721 -2.176 D 184 182 3 185 3 0 0 20 39 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 58 - U - - - ML 186 185 3 188 3 1 1 20 39 -7.960 -0.021 -6.614 -1.477 -1.475 -2.211 1.616 D 187 185 3 188 3 0 0 19 38 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 59 - U - - - ML 189 188 3 191 3 1 1 19 37 -7.960 -0.021 -6.614 -1.477 -1.475 -2.211 1.616 D 190 188 3 191 3 0 0 18 37 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 60 - U - - - ML 192 191 3 194 3 1 1 18 36 -7.960 -0.021 -6.614 -1.477 -1.475 -2.211 1.616 D 193 191 3 194 3 0 0 17 36 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 61 - C - - - ML 195 194 3 197 3 1 1 16 35 -7.960 -0.021 -6.614 -1.730 1.621 -2.554 -1.146 D 196 194 3 197 3 0 0 16 34 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 62 - U - - - ML 198 197 3 200 3 1 1 15 33 -7.960 -0.021 -6.614 -1.477 -1.475 -2.211 1.616 D 199 197 3 200 3 0 0 15 33 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 63 - G - - - ML 201 200 3 203 3 1 1 13 31 -7.960 -0.021 -6.614 -1.571 -2.790 1.721 -2.176 D 202 200 3 203 3 0 0 13 32 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 64 - A - - - ML 204 203 3 206 2 1 1 1 1 * 0.000 1.717 -2.362 -1.995 -1.904 D 205 203 3 206 2 0 0 0 0 * 0.000 IL 206 206 3 206 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 65 ] - - - - - - E 207 206 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD95 ACC RF00189 DESC Small nucleolar RNA SNORD95 LENG 68 MAXL 154 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 16 20:20:06 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00189/CM NSEQ 7 EFFN 2.033691 CKSUM 114941803 STATS LOCAL MSV -8.5548 0.71886 STATS LOCAL VITERBI -8.9059 0.71886 STATS LOCAL FORWARD -3.9351 0.71886 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.35362 1.45029 1.37576 1.36827 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 0.00000 * 1 1.33820 1.21677 1.48996 1.53193 1 c - - : 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 2 1.37519 1.21619 1.44464 1.53702 2 c - - : 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 3 0.85099 2.37236 1.07910 1.96721 3 a - - : 1.38629 1.38629 1.38629 1.38629 0.12878 3.88697 2.29938 1.46634 0.26236 1.09861 0.40547 4 0.75984 2.30323 1.26189 1.90244 4 a - - : 1.38629 1.38629 1.38629 1.38629 0.04560 3.80379 3.80379 1.46634 0.26236 0.34276 1.23721 5 3.02918 0.28302 2.79074 1.98952 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 6 0.83136 2.49146 0.95510 2.33326 6 a - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 7 1.89883 2.72358 0.34250 2.59532 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 8 2.79539 1.50357 2.56850 0.44641 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 9 2.53990 3.39461 0.17882 2.96983 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 10 0.18334 3.08512 2.82448 2.77335 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 11 2.46663 2.45527 2.97768 0.25054 11 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 12 2.53990 3.39461 0.17882 2.96983 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 13 0.18334 3.08512 2.82448 2.77335 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 14 2.10926 0.56084 2.67904 1.42998 14 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 15 2.10926 0.56084 2.67904 1.42998 15 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 16 0.90794 1.24843 2.16882 1.63281 16 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 17 2.65953 0.24327 3.23245 2.23963 17 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 18 0.18334 3.08512 2.82448 2.77335 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 19 0.18334 3.08512 2.82448 2.77335 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 20 2.65953 0.24327 3.23245 2.23963 20 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 21 0.18334 3.08512 2.82448 2.77335 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 22 2.46663 2.45527 2.97768 0.25054 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 23 2.53990 3.39461 0.17882 2.96983 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 24 2.65953 0.24327 3.23245 2.23963 24 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 25 2.65953 0.24327 3.23245 2.23963 25 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 26 0.18334 3.08512 2.82448 2.77335 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 27 2.46663 2.45527 2.97768 0.25054 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 28 2.65953 0.24327 3.23245 2.23963 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 29 2.46663 2.45527 2.97768 0.25054 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 30 2.53990 3.39461 0.17882 2.96983 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 31 0.18334 3.08512 2.82448 2.77335 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 32 2.53990 3.39461 0.17882 2.96983 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 33 2.46663 2.45527 2.97768 0.25054 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 34 1.65567 2.04031 1.20062 0.97276 34 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 35 1.61851 1.77686 0.91844 1.45459 35 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 36 2.65953 0.24327 3.23245 2.23963 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 37 1.70569 1.63677 1.88928 0.74958 37 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 38 1.42341 1.94863 1.80431 0.79396 38 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 39 2.46663 2.45527 2.97768 0.25054 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 40 2.53990 3.39461 0.17882 2.96983 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 41 2.65953 0.24327 3.23245 2.23963 41 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 42 2.46663 2.45527 2.97768 0.25054 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 43 2.53990 3.39461 0.17882 2.96983 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 44 0.18334 3.08512 2.82448 2.77335 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 45 0.18334 3.08512 2.82448 2.77335 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 46 0.18334 3.08512 2.82448 2.77335 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 47 2.02551 1.66877 2.54066 0.50952 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 48 2.65953 0.24327 3.23245 2.23963 48 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 49 2.65953 0.24327 3.23245 2.23963 49 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 50 0.18334 3.08512 2.82448 2.77335 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 51 2.53990 3.39461 0.17882 2.96983 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 52 0.18334 3.08512 2.82448 2.77335 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 53 2.53990 3.39461 0.17882 2.96983 53 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 54 2.53990 3.39461 0.17882 2.96983 54 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 55 2.65953 0.24327 3.23245 2.23963 55 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 56 2.46663 2.45527 2.97768 0.25054 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 57 2.53990 3.39461 0.17882 2.96983 57 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 58 2.46663 2.45527 2.97768 0.25054 58 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 59 2.46663 2.45527 2.97768 0.25054 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 60 2.46663 2.45527 2.97768 0.25054 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 61 2.65953 0.24327 3.23245 2.23963 61 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 62 2.46663 2.45527 2.97768 0.25054 62 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 63 2.53990 3.39461 0.17882 2.96983 63 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 64 0.18334 3.08512 2.82448 2.77335 64 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 65 2.02260 2.74056 0.32256 2.54008 65 G - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 66 2.81348 0.35031 2.53687 1.85521 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 67 2.53851 1.59885 2.29031 0.48183 67 U - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88697 3.88697 1.46634 0.26236 1.09861 0.40547 68 2.24844 2.93916 0.25003 2.76857 68 G - - > 1.38629 1.38629 1.38629 1.38629 0.02116 3.86624 * 1.46634 0.26236 0.00000 * //