INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD102 ACC RF00187 DESC Small nucleolar RNA SNORD102 STATES 220 NODES 69 CLEN 72 W 90 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 09:10:36 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00187/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 11 EFFN 1.995361 CKSUM 1303347639 NULL 0.000 0.000 0.000 0.000 GA 47.00 TC 47.00 NC 46.80 EFP7GF -9.1079 0.71874 ECMLC 0.60346 -5.67333 3.74472 1600000 352739 0.003402 ECMGC 0.41386 -15.03316 -1.79650 1600000 95755 0.004177 ECMLI 0.54373 -3.82273 6.13451 1600000 269445 0.004454 ECMGI 0.43135 -9.67389 2.34529 1600000 71392 0.005603 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 90 110 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 IL 1 1 2 1 6 1 26 91 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 26 91 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 75 A U - - MP 3 2 3 7 6 2 29 90 110 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -3.839 -2.858 -3.855 3.362 -4.217 -5.283 0.086 -3.894 -3.744 1.027 -4.294 -0.327 -0.331 -4.463 -1.854 -2.685 ML 4 2 3 7 6 1 23 88 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 23 88 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 18 85 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 25 89 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 25 89 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 74 G C - - MP 9 8 6 13 6 2 27 88 108 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -4.271 -2.859 -4.313 0.925 -4.855 -4.598 -0.248 -4.629 -4.083 3.467 -4.456 -0.516 -0.574 -4.156 -2.259 -3.201 ML 10 8 6 13 6 1 23 86 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 22 86 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 18 84 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 24 87 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 24 87 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 73 C G - - MP 15 14 6 19 6 2 26 86 106 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -4.092 -4.053 -3.861 -0.293 -2.646 -4.327 3.313 -3.420 -3.892 -0.061 -4.213 -2.054 0.943 -4.178 0.389 -2.742 ML 16 14 6 19 6 1 22 84 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 21 84 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 17 82 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 23 85 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 23 85 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 72 U A - - MP 21 20 6 25 6 2 24 84 104 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -4.252 -4.079 -4.084 -0.370 -3.013 -4.642 1.317 -3.713 -4.088 -0.125 -4.458 -1.976 3.357 -4.402 -0.687 -2.906 ML 22 20 6 25 6 1 21 83 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 19 82 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 17 81 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 22 83 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 22 83 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 71 u a - - MP 27 26 6 31 4 2 22 82 102 -6.975 -7.182 -0.052 -5.596 -3.497 -3.469 -3.432 0.170 -2.505 -4.052 1.786 -3.178 -3.451 0.392 -3.871 -1.530 2.680 -3.672 1.205 -2.361 ML 28 26 6 31 4 1 20 82 102 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 18 81 102 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 17 80 101 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 21 83 104 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 21 82 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 33 32 6 35 3 1 20 79 100 -7.989 -0.020 -6.643 1.257 -1.532 -0.389 -0.998 D 34 32 6 35 3 0 16 78 98 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 20 81 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 36 35 3 38 3 1 19 78 99 -7.989 -0.020 -6.643 1.730 -2.422 -2.049 -1.969 D 37 35 3 38 3 0 15 77 97 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 19 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 39 38 3 41 3 1 19 77 98 -7.989 -0.020 -6.643 -1.532 -1.520 -2.268 1.631 D 40 38 3 41 3 0 14 76 96 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 18 79 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 42 41 3 44 3 1 18 76 97 -7.989 -0.020 -6.643 -1.634 -2.862 1.736 -2.249 D 43 41 3 44 3 0 14 75 95 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 17 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 45 44 3 47 3 1 17 75 96 -7.989 -0.020 -6.643 1.730 -2.422 -2.049 -1.969 D 46 44 3 47 3 0 13 74 94 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 17 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 48 47 3 50 3 1 16 74 95 -7.989 -0.020 -6.643 -1.532 -1.520 -2.268 1.631 D 49 47 3 50 3 0 12 73 93 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 16 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - G - - - ML 51 50 3 53 3 1 15 73 94 -7.989 -0.020 -6.643 -1.634 -2.862 1.736 -2.249 D 52 50 3 53 3 0 12 72 92 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 15 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 54 53 3 56 3 1 14 72 92 -7.989 -0.106 -3.898 1.730 -2.422 -2.049 -1.969 D 55 53 3 56 3 0 11 71 91 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 14 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 57 56 3 59 3 1 13 71 91 -7.904 -0.021 -6.558 -0.816 -0.368 -1.554 1.212 D 58 56 3 59 3 0 11 69 90 -6.794 -2.307 -0.342 IL 59 59 3 59 3 1 14 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 60 59 3 62 3 1 12 70 90 -7.904 -0.170 -3.226 -1.376 -1.392 -2.104 1.585 D 61 59 3 62 3 0 10 69 89 -6.794 -0.859 -1.186 IL 62 62 3 62 3 1 13 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - G - - - ML 63 62 3 65 3 1 12 69 89 -7.852 -0.022 -6.506 -1.340 -2.521 1.662 -1.906 D 64 62 3 65 3 0 9 68 88 -7.064 -0.671 -1.456 IL 65 65 3 65 3 1 12 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - U - - - ML 66 65 3 68 3 1 11 68 88 -7.989 -0.089 -4.156 -0.258 -0.940 -1.376 1.175 D 67 65 3 68 3 0 8 67 87 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 11 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - u - - - ML 69 68 3 71 3 1 10 67 87 -7.921 -0.335 -2.301 -0.198 0.377 -1.178 0.472 D 70 68 3 71 3 0 7 66 86 -6.694 -2.207 -0.370 IL 71 71 3 71 3 1 12 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - u - - - ML 72 71 3 74 3 1 11 66 86 -7.613 -0.026 -6.267 -0.467 -0.013 -1.194 0.886 D 73 71 3 74 3 0 7 65 85 -7.834 -0.633 -1.511 IL 74 74 3 74 3 1 10 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - U - - - ML 75 74 3 77 3 1 11 65 85 -7.921 -0.021 -6.575 -0.916 -0.579 -1.650 1.311 D 76 74 3 77 3 0 5 63 84 -6.694 -2.207 -0.370 IL 77 77 3 77 3 1 10 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 78 77 3 80 3 1 10 64 84 -7.921 -0.021 -6.575 -0.438 -0.949 -1.431 1.247 D 79 77 3 80 3 0 4 62 83 -6.694 -2.207 -0.370 IL 80 80 3 80 3 1 9 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - U - - - ML 81 80 3 83 3 1 9 63 83 -7.921 -0.021 -6.575 -1.406 -1.417 -2.136 1.595 D 82 80 3 83 3 0 4 62 82 -6.694 -0.946 -1.085 IL 83 83 3 83 3 1 8 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - U - - - ML 84 83 3 86 3 1 9 62 82 -7.989 -0.020 -6.643 -0.728 -0.983 -0.998 1.257 D 85 83 3 86 3 0 2 61 81 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 7 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - U - - - ML 87 86 3 89 3 1 8 61 81 -7.989 -0.020 -6.643 -0.725 -0.982 -0.991 1.254 D 88 86 3 89 3 0 2 60 80 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - G - - - ML 90 89 3 92 3 1 7 60 80 -7.989 -0.020 -6.643 -0.244 -1.370 1.050 -0.518 D 91 89 3 92 3 0 1 58 79 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 6 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - A - - - ML 93 92 3 95 3 1 7 59 79 -7.989 -0.020 -6.643 1.099 -1.147 -0.662 -0.370 D 94 92 3 95 3 0 0 57 78 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 5 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - U - - - ML 96 95 3 98 3 1 6 58 78 -7.989 -0.020 -6.643 -0.506 -1.013 -1.515 1.293 D 97 95 3 98 3 0 0 56 77 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 4 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - U - - - ML 99 98 3 101 3 1 5 57 77 -7.989 -0.020 -6.643 -0.725 -0.982 -0.991 1.254 D 100 98 3 101 3 0 0 55 75 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - G - - - ML 102 101 3 104 3 1 5 56 76 -7.989 -0.020 -6.643 -0.719 -1.213 1.307 -1.041 D 103 101 3 104 3 0 0 54 74 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 3 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - C - - - ML 105 104 3 107 3 1 4 55 75 -3.386 -0.161 -6.643 -1.191 1.330 -2.016 -0.321 D 106 104 3 107 3 0 0 53 72 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 3 56 76 -1.477 -0.742 -4.547 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - U - - - ML 108 107 3 110 3 1 4 53 73 -7.989 -0.020 -6.643 -1.532 -1.520 -2.268 1.631 D 109 107 3 110 3 0 0 51 71 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - U - - - ML 111 110 3 113 3 1 3 52 72 -7.989 -0.020 -6.643 -0.907 -0.402 -1.649 1.258 D 112 110 3 113 3 0 0 50 70 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 35 - G - - - ML 114 113 3 116 3 1 3 51 71 -7.989 -0.020 -6.643 0.182 -1.613 1.033 -1.020 D 115 113 3 116 3 0 0 49 69 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 36 - A - - - ML 117 116 3 119 3 1 2 50 69 -7.989 -0.020 -6.643 1.730 -2.422 -2.049 -1.969 D 118 116 3 119 3 0 0 48 68 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 37 - A - - - ML 120 119 3 122 3 1 2 49 68 -7.989 -0.020 -6.643 1.412 -1.495 -1.428 -0.707 D 121 119 3 122 3 0 0 47 67 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 38 - G - - - ML 123 122 3 125 3 1 2 48 67 -7.989 -0.020 -6.643 -1.634 -2.862 1.736 -2.249 D 124 122 3 125 3 0 0 46 66 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - C - - - ML 126 125 3 128 3 1 1 47 66 -7.989 -0.020 -6.643 -1.802 1.640 -2.628 -1.203 D 127 125 3 128 3 0 0 45 65 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - A - - - ML 129 128 3 131 3 1 1 46 65 -7.989 -0.020 -6.643 1.730 -2.422 -2.049 -1.969 D 130 128 3 131 3 0 0 44 64 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - A - - - ML 132 131 3 134 3 1 1 44 64 -7.989 -0.020 -6.643 1.730 -2.422 -2.049 -1.969 D 133 131 3 134 3 0 0 43 63 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - u - - - ML 135 134 3 137 3 1 1 43 63 -7.989 -0.020 -6.643 -0.357 -0.119 -1.275 0.914 D 136 134 3 137 3 0 0 42 62 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - G - - - ML 138 137 3 140 3 1 1 42 62 -7.989 -0.020 -6.643 0.092 -1.661 1.098 -1.069 D 139 137 3 140 3 0 0 41 61 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - U - - - ML 141 140 3 143 3 1 1 41 61 -7.989 -0.020 -6.643 -1.532 -1.520 -2.268 1.631 D 142 140 3 143 3 0 0 40 59 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - G - - - ML 144 143 3 146 3 1 1 40 60 -4.035 -0.106 -6.643 -1.634 -2.862 1.736 -2.249 D 145 143 3 146 3 0 0 38 58 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 41 61 -1.624 -0.676 -4.324 0.000 0.000 0.000 0.000 [ MATL 44 ] 47 - A - - - ML 147 146 3 149 3 1 1 39 58 -7.989 -0.020 -6.643 1.730 -2.422 -2.049 -1.969 D 148 146 3 149 3 0 0 37 57 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 48 - A - - - ML 150 149 3 152 3 1 1 38 57 -7.989 -0.020 -6.643 1.730 -2.422 -2.049 -1.969 D 151 149 3 152 3 0 0 36 56 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 49 - A - - - ML 153 152 3 155 3 1 1 37 56 -7.989 -0.020 -6.643 1.730 -2.422 -2.049 -1.969 D 154 152 3 155 3 0 0 35 55 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 50 - A - - - ML 156 155 3 158 3 1 1 36 55 -7.989 -0.020 -6.643 1.730 -2.422 -2.049 -1.969 D 157 155 3 158 3 0 0 34 54 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 51 - A - - - ML 159 158 3 161 3 1 1 34 54 -7.989 -0.020 -6.643 1.133 -0.774 -1.151 -0.374 D 160 158 3 161 3 0 0 33 53 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 52 - c - - - ML 162 161 3 164 3 1 1 33 53 -7.989 -0.020 -6.643 -0.409 0.564 -0.581 0.138 D 163 161 3 164 3 0 0 32 51 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 53 - A - - - ML 165 164 3 167 3 1 1 32 51 -7.989 -0.020 -6.643 1.201 -0.971 -0.788 -0.710 D 166 164 3 167 3 0 0 31 50 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 54 - C - - - ML 168 167 3 170 3 1 1 31 50 -7.989 -0.020 -6.643 -1.802 1.640 -2.628 -1.203 D 169 167 3 170 3 0 0 30 49 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 55 - A - - - ML 171 170 3 173 3 1 1 30 49 -7.989 -0.020 -6.643 1.730 -2.422 -2.049 -1.969 D 172 170 3 173 3 0 0 29 48 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 56 - U - - - ML 174 173 3 176 3 1 1 29 48 -7.989 -0.020 -6.643 -1.532 -1.520 -2.268 1.631 D 175 173 3 176 3 0 0 28 47 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 57 - U - - - ML 177 176 3 179 3 1 1 28 47 -7.989 -0.020 -6.643 -1.532 -1.520 -2.268 1.631 D 178 176 3 179 3 0 0 27 46 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 58 - U - - - ML 180 179 3 182 3 1 1 27 46 -7.989 -0.020 -6.643 -1.532 -1.520 -2.268 1.631 D 181 179 3 182 3 0 0 26 45 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 59 - C - - - ML 183 182 3 185 3 1 1 26 45 -7.989 -0.020 -6.643 -1.802 1.640 -2.628 -1.203 D 184 182 3 185 3 0 0 25 44 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 60 - A - - - ML 186 185 3 188 3 1 1 25 43 -7.989 -0.020 -6.643 1.730 -2.422 -2.049 -1.969 D 187 185 3 188 3 0 0 24 43 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 61 - C - - - ML 189 188 3 191 3 1 1 23 42 -7.989 -0.020 -6.643 -1.802 1.640 -2.628 -1.203 D 190 188 3 191 3 0 0 22 41 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 62 - C - - - ML 192 191 3 194 3 1 1 22 41 -7.989 -0.020 -6.643 -1.802 1.640 -2.628 -1.203 D 193 191 3 194 3 0 0 21 40 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 63 - G - - - ML 195 194 3 197 3 1 1 21 40 -7.989 -0.020 -6.643 -1.634 -2.862 1.736 -2.249 D 196 194 3 197 3 0 0 20 39 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 64 - G - - - ML 198 197 3 200 3 1 1 20 39 -7.989 -0.020 -6.643 -1.634 -2.862 1.736 -2.249 D 199 197 3 200 3 0 0 19 38 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 65 - C - - - ML 201 200 3 203 3 1 1 19 37 -7.989 -0.020 -6.643 -1.802 1.640 -2.628 -1.203 D 202 200 3 203 3 0 0 18 37 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 66 - U - - - ML 204 203 3 206 3 1 1 18 36 -7.989 -0.020 -6.643 -1.532 -1.520 -2.268 1.631 D 205 203 3 206 3 0 0 17 36 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 67 - C - - - ML 207 206 3 209 3 1 1 16 35 -7.989 -0.020 -6.643 -1.802 1.640 -2.628 -1.203 D 208 206 3 209 3 0 0 16 34 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 68 - U - - - ML 210 209 3 212 3 1 1 15 33 -7.989 -0.020 -6.643 -1.532 -1.520 -2.268 1.631 D 211 209 3 212 3 0 0 15 33 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 69 - G - - - ML 213 212 3 215 3 1 1 13 31 -7.989 -0.020 -6.643 -1.634 -2.862 1.736 -2.249 D 214 212 3 215 3 0 0 13 32 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 70 - A - - - ML 216 215 3 218 2 1 1 1 1 * 0.000 1.730 -2.422 -2.049 -1.969 D 217 215 3 218 2 0 0 0 0 * 0.000 IL 218 218 3 218 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 68 ] - - - - - - E 219 218 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD102 ACC RF00187 DESC Small nucleolar RNA SNORD102 LENG 72 MAXL 158 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 09:10:36 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00187/CM NSEQ 11 EFFN 2.194092 CKSUM 1303347639 STATS LOCAL MSV -8.4444 0.71874 STATS LOCAL VITERBI -9.2388 0.71874 STATS LOCAL FORWARD -3.1661 0.71874 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.22130 1.64311 1.53982 1.21282 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 0.00000 * 1 0.36983 2.69626 1.77138 2.63674 1 A - - < 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 2 2.02328 2.87923 0.28814 2.78150 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 3 2.79834 0.42897 2.55357 1.56013 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 4 2.89644 1.84435 2.63375 0.33569 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 5 2.46501 1.46903 2.22548 0.55021 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 6 0.49611 2.49833 1.65896 2.13243 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 7 0.16762 3.16699 2.89820 2.86345 7 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 8 2.54244 2.51796 3.05698 0.23108 8 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 9 2.62551 3.49287 0.16171 3.06835 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 10 0.16762 3.16699 2.89820 2.86345 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 11 2.54244 2.51796 3.05698 0.23108 11 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 12 2.62551 3.49287 0.16171 3.06835 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 13 0.16762 3.16699 2.89820 2.86345 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.10750 3.92609 2.49852 1.46634 0.26236 1.09861 0.40547 14 1.99920 1.65200 2.51351 0.52441 14 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04298 3.86157 3.86157 1.46634 0.26236 1.81947 0.17687 15 2.42716 2.42270 2.93626 0.26141 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.16020 3.86157 2.06361 1.46634 0.26236 0.39189 1.12632 16 2.41300 3.24778 0.20810 2.82233 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04478 3.82147 3.82147 1.46634 0.26236 0.28614 1.39095 17 1.58501 2.07565 2.38469 0.54911 17 U - - _ 1.38629 1.38629 1.38629 1.38629 0.09419 3.92609 2.65687 1.46634 0.26236 1.09861 0.40547 18 1.53849 1.10622 2.23258 1.05775 18 u - - _ 1.38629 1.38629 1.38629 1.38629 0.29197 3.87433 1.45913 1.46634 0.26236 1.71525 0.19835 19 1.73834 1.39091 2.24567 0.75612 19 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05413 3.63649 3.63649 1.46634 0.26236 0.34165 1.23994 20 2.07447 1.80787 2.58579 0.45407 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04242 3.87433 3.87433 1.46634 0.26236 1.71525 0.19835 21 1.71970 2.08347 2.42712 0.49743 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04242 3.87433 3.87433 1.46634 0.26236 1.71525 0.19835 22 2.44975 2.44133 2.95998 0.25512 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04242 3.87433 3.87433 1.46634 0.26236 0.44603 1.02211 23 1.93923 2.11035 2.10553 0.48905 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 24 1.93703 2.10935 2.10048 0.49077 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 25 1.57854 2.37478 0.63349 1.77224 25 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 26 0.60840 2.20979 1.85823 1.66017 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 27 1.76976 2.13209 2.49002 0.46501 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 28 1.93703 2.10935 2.10048 0.49077 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 29 1.94109 2.25868 0.44902 2.17410 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 30 2.28634 0.43377 2.86407 1.64371 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.15065 2.11921 3.92609 0.58585 0.81335 1.09861 0.40547 31 2.54244 2.51796 3.05698 0.23108 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 32 2.06715 1.67659 2.58445 0.49265 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 33 1.26663 2.55684 0.64612 2.14907 35 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 34 0.16762 3.16699 2.89820 2.86345 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 35 0.38697 2.46933 2.42739 1.91068 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 36 2.62551 3.49287 0.16171 3.06835 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 37 2.75863 0.21994 3.33361 2.31879 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 38 0.16762 3.16699 2.89820 2.86345 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 39 0.16762 3.16699 2.89820 2.86345 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 40 1.65493 1.46518 2.30275 0.73841 42 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 41 1.33240 2.59223 0.59998 2.18496 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 42 2.54244 2.51796 3.05698 0.23108 44 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 43 2.62551 3.49287 0.16171 3.06835 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.10750 2.49852 3.92609 0.42573 1.05928 1.09861 0.40547 44 0.16762 3.16699 2.89820 2.86345 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 45 0.16762 3.16699 2.89820 2.86345 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 46 0.16762 3.16699 2.89820 2.86345 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 47 0.16762 3.16699 2.89820 2.86345 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 48 0.58211 1.93577 2.22022 1.66929 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 49 1.69681 0.97324 1.79358 1.30007 52 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 50 0.53492 2.07760 1.95152 1.91736 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 51 2.75863 0.21994 3.33361 2.31879 54 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 52 0.16762 3.16699 2.89820 2.86345 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 53 2.54244 2.51796 3.05698 0.23108 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 54 2.54244 2.51796 3.05698 0.23108 57 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 55 2.54244 2.51796 3.05698 0.23108 58 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 56 2.75863 0.21994 3.33362 2.31879 59 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 57 0.16762 3.16699 2.89820 2.86345 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 58 2.75863 0.21994 3.33362 2.31879 61 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 59 2.75863 0.21994 3.33362 2.31879 62 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 60 2.62551 3.49287 0.16171 3.06835 63 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 61 2.62551 3.49287 0.16171 3.06835 64 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 62 2.75863 0.21994 3.33362 2.31879 65 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 63 2.54244 2.51796 3.05698 0.23108 66 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 64 2.75863 0.21994 3.33362 2.31879 67 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 65 2.54244 2.51796 3.05698 0.23108 68 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 66 2.62551 3.49287 0.16171 3.06835 69 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 67 0.16762 3.16699 2.89820 2.86345 70 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 68 0.83544 2.39119 0.99958 2.23715 71 a - - > 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 69 0.38117 2.81751 1.68127 2.64447 72 A - - > 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 70 2.01324 2.71574 0.32475 2.55644 73 G - - > 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 71 3.01642 0.33430 2.70246 1.78295 74 C - - > 1.38629 1.38629 1.38629 1.38629 0.04024 3.92609 3.92609 1.46634 0.26236 1.09861 0.40547 72 2.87884 2.05863 2.50877 0.30815 75 U - - > 1.38629 1.38629 1.38629 1.38629 0.02032 3.90618 * 1.46634 0.26236 0.00000 * //