INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD101 ACC RF00186 DESC Small nucleolar RNA SNORD101 STATES 223 NODES 70 CLEN 73 W 92 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 17 00:20:28 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00186/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 26 EFFN 2.256592 CKSUM 2736876176 NULL 0.000 0.000 0.000 0.000 GA 47.00 TC 47.00 NC 46.70 EFP7GF -9.6673 0.71878 ECMLC 0.64293 -5.84322 3.13021 1600000 384358 0.003122 ECMGC 0.39741 -18.00338 -4.31148 1600000 92303 0.004334 ECMLI 0.62130 -4.00505 4.92053 1600000 307291 0.003905 ECMGI 0.42537 -11.69064 0.31516 1600000 66061 0.006055 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 92 115 -9.158 -9.097 -0.020 -7.874 -8.153 -8.548 IL 1 1 2 1 6 1 28 94 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 28 94 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 90 G C - - MP 3 2 3 7 6 2 31 92 115 -9.158 -9.097 -0.020 -7.874 -8.153 -8.548 -4.496 -1.731 -4.543 0.386 -5.211 -4.592 -0.562 -4.958 -4.263 3.578 -4.594 -0.673 -0.855 -4.224 -2.567 -3.473 ML 4 2 3 7 6 1 25 91 113 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 25 91 113 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 20 88 111 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 27 92 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 27 92 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 89 U A - - MP 9 8 6 13 6 2 30 90 113 -6.119 -9.097 -0.039 -7.874 -8.153 -8.548 -3.821 -3.591 -3.759 0.437 -2.886 -4.447 1.459 -3.500 -3.744 0.362 -4.177 -1.445 3.124 -4.034 -0.560 -2.615 ML 10 8 6 13 6 1 25 89 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 24 89 111 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 20 86 109 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 26 90 112 -2.754 -3.017 -0.651 -4.672 -5.448 -5.108 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 26 90 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 4 88 U A - - MP 15 14 6 19 6 2 28 88 111 -9.158 -9.097 -0.020 -7.874 -8.153 -8.548 -4.476 -4.308 -4.282 -0.583 -3.165 -4.820 1.168 -3.880 -4.285 -0.368 -4.643 -2.197 3.449 -4.616 -0.834 -3.078 ML 16 14 6 19 6 1 24 87 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 23 87 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 19 84 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 25 88 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 25 88 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 5 87 u a - - MP 21 20 6 25 6 2 26 86 109 -9.158 -9.097 -0.045 -5.593 -8.153 -8.548 -2.889 -2.832 -2.987 0.620 -2.539 -3.789 1.565 -3.029 -3.009 1.072 -1.931 -0.954 2.720 -3.152 -0.355 -2.007 ML 22 20 6 25 6 1 23 85 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 21 85 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 19 83 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 24 86 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 24 86 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 6 86 G C - - MP 27 26 6 31 4 2 25 84 107 -7.016 -7.223 -0.051 -5.637 -4.870 -3.155 -4.982 0.114 -5.412 -4.743 -0.745 -5.233 -4.410 3.667 -4.738 -0.859 -1.127 -4.551 -2.789 -3.856 ML 28 26 6 31 4 1 22 84 107 -3.983 -4.165 -0.422 -2.895 0.818 -0.702 -0.426 -0.188 MR 29 26 6 31 4 1 20 84 106 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 18 83 105 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 23 86 108 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 23 85 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 7 - A - - - ML 33 32 6 35 3 1 23 82 105 -8.084 -0.019 -6.738 1.227 -1.129 -0.837 -0.638 D 34 32 6 35 3 0 18 81 103 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 22 84 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 8 - A - - - ML 36 35 3 38 3 1 22 81 104 -8.084 -0.019 -6.738 1.419 -1.751 -0.715 -1.251 D 37 35 3 38 3 0 17 80 102 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 21 83 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 9 - U - - - ML 39 38 3 41 3 1 21 80 103 -8.084 -0.019 -6.738 -1.710 -1.667 -2.454 1.677 D 40 38 3 41 3 0 16 79 101 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 21 82 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 10 - G - - - ML 42 41 3 44 3 1 20 79 102 -8.084 -0.019 -6.738 -1.834 -3.092 1.775 -2.480 D 43 41 3 44 3 0 16 78 100 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 20 81 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - A - - - ML 45 44 3 47 3 1 20 78 101 -8.084 -0.019 -6.738 1.766 -2.614 -2.222 -2.180 D 46 44 3 47 3 0 15 77 99 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 19 80 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - U - - - ML 48 47 3 50 3 1 19 77 100 -8.084 -0.019 -6.738 -1.710 -1.667 -2.454 1.677 D 49 47 3 50 3 0 14 76 98 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 18 79 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - G - - - ML 51 50 3 53 3 1 18 76 99 -8.084 -0.019 -6.738 -1.834 -3.092 1.775 -2.480 D 52 50 3 53 3 0 14 74 97 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 17 78 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - A - - - ML 54 53 3 56 3 1 17 75 98 -8.084 -0.019 -6.738 1.766 -2.614 -2.222 -2.180 D 55 53 3 56 3 0 13 74 96 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 17 77 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - C - - - ML 57 56 3 59 3 1 16 74 97 -8.084 -0.091 -4.120 -0.807 1.291 -1.870 -0.498 D 58 56 3 59 3 0 12 73 95 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 16 76 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - U - - - ML 60 59 3 62 3 1 16 73 96 -8.013 -0.020 -6.667 -1.576 -1.556 -2.314 1.643 D 61 59 3 62 3 0 12 72 94 -6.743 -0.902 -1.135 IL 62 62 3 62 3 1 15 75 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - U - - - ML 63 62 3 65 3 1 15 72 95 -5.551 -0.045 -6.738 -0.410 -0.942 -1.003 1.156 D 64 62 3 65 3 0 10 70 93 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 14 74 97 -1.310 -0.871 -4.323 0.000 0.000 0.000 0.000 [ MATL 17 ] 21 - a - - - ML 66 65 3 68 3 1 14 71 93 -4.708 -0.070 -6.738 0.265 -0.602 -0.048 0.229 D 67 65 3 68 3 0 10 69 91 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 14 73 96 -1.218 -0.929 -4.477 0.000 0.000 0.000 0.000 [ MATL 18 ] 25 - A - - - ML 69 68 3 71 3 1 13 69 91 -5.536 -0.124 -4.038 1.231 -1.256 -1.049 -0.413 D 70 68 3 71 3 0 9 67 89 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 13 70 92 -1.505 -0.753 -4.205 0.000 0.000 0.000 0.000 [ MATL 19 ] 27 - a - - - ML 72 71 3 74 3 1 13 68 90 -4.521 -0.079 -6.662 0.775 -0.944 -0.382 0.003 D 73 71 3 74 3 0 8 66 88 -6.776 -0.874 -1.167 IL 74 74 3 74 3 1 12 69 91 -1.573 -0.708 -4.273 0.000 0.000 0.000 0.000 [ MATL 20 ] 29 - U - - - ML 75 74 3 77 3 1 13 67 89 -5.286 -0.051 -6.738 -0.754 -1.034 -0.897 1.252 D 76 74 3 77 3 0 7 65 87 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 12 70 92 -1.193 -0.954 -4.430 0.000 0.000 0.000 0.000 [ MATL 21 ] 34 - U - - - ML 78 77 3 80 3 1 12 65 85 -8.084 -0.019 -6.738 -1.710 -1.667 -2.454 1.677 D 79 77 3 80 3 0 6 63 84 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 11 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 35 - G - - - ML 81 80 3 83 3 1 11 64 84 -8.084 -0.019 -6.738 -1.834 -3.092 1.775 -2.480 D 82 80 3 83 3 0 6 62 83 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 10 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 36 - U - - - ML 84 83 3 86 3 1 11 63 83 -8.084 -0.019 -6.738 -1.710 -1.667 -2.454 1.677 D 85 83 3 86 3 0 5 61 82 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 37 - C - - - ML 87 86 3 89 3 1 10 62 82 -8.084 -0.019 -6.738 -2.034 1.695 -2.865 -1.389 D 88 86 3 89 3 0 4 60 80 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 9 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 38 - G - - - ML 90 89 3 92 3 1 9 61 81 -8.084 -0.019 -6.738 -1.834 -3.092 1.775 -2.480 D 91 89 3 92 3 0 4 59 79 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 8 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 39 - G - - - ML 93 92 3 95 3 1 9 60 80 -8.084 -0.019 -6.738 -1.834 -3.092 1.775 -2.480 D 94 92 3 95 3 0 3 58 78 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 7 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 40 - A - - - ML 96 95 3 98 3 1 8 59 79 -8.084 -0.019 -6.738 1.766 -2.614 -2.222 -2.180 D 97 95 3 98 3 0 2 57 77 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 7 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 41 - U - - - ML 99 98 3 101 3 1 8 58 78 -8.084 -0.019 -6.738 -1.710 -1.667 -2.454 1.677 D 100 98 3 101 3 0 2 56 76 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 6 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 42 - A - - - ML 102 101 3 104 3 1 7 57 76 -8.084 -0.019 -6.738 1.766 -2.614 -2.222 -2.180 D 103 101 3 104 3 0 1 55 75 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 6 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 43 - C - - - ML 105 104 3 107 3 1 6 56 75 -8.084 -0.019 -6.738 -2.034 1.695 -2.865 -1.389 D 106 104 3 107 3 0 1 54 74 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 5 57 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 44 - C - - - ML 108 107 3 110 3 1 6 55 74 -8.084 -0.019 -6.738 -2.034 1.695 -2.865 -1.389 D 109 107 3 110 3 0 0 53 73 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 4 56 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 45 - C - - - ML 111 110 3 113 3 1 5 54 73 -8.084 -0.019 -6.738 -2.034 1.695 -2.865 -1.389 D 112 110 3 113 3 0 0 52 72 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 4 55 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 46 - C - - - ML 114 113 3 116 3 1 5 52 72 -8.084 -0.019 -6.738 -2.034 1.695 -2.865 -1.389 D 115 113 3 116 3 0 0 51 71 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 3 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 47 - U - - - ML 117 116 3 119 3 1 4 51 71 -8.084 -0.019 -6.738 -1.710 -1.667 -2.454 1.677 D 118 116 3 119 3 0 0 50 70 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 3 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 48 - U - - - ML 120 119 3 122 3 1 4 50 70 -8.084 -0.019 -6.738 -0.648 -1.123 -1.664 1.371 D 121 119 3 122 3 0 0 49 69 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 2 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 49 - C - - - ML 123 122 3 125 3 1 3 49 69 -8.084 -0.019 -6.738 -2.034 1.695 -2.865 -1.389 D 124 122 3 125 3 0 0 48 68 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 2 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 50 - A - - - ML 126 125 3 128 3 1 3 48 68 -8.084 -0.019 -6.738 1.766 -2.614 -2.222 -2.180 D 127 125 3 128 3 0 0 47 67 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 51 - C - - - ML 129 128 3 131 3 1 2 47 67 -8.084 -0.019 -6.738 -2.034 1.695 -2.865 -1.389 D 130 128 3 131 3 0 0 46 66 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 52 - U - - - ML 132 131 3 134 3 1 2 46 66 -8.084 -0.019 -6.738 -1.197 -0.852 -1.936 1.459 D 133 131 3 134 3 0 0 45 64 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 53 - C - - - ML 135 134 3 137 3 1 1 45 65 -8.084 -0.045 -5.200 -2.034 1.695 -2.865 -1.389 D 136 134 3 137 3 0 0 44 63 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 54 - c - - - ML 138 137 3 140 3 1 1 44 64 -4.896 -0.108 -4.709 -0.699 0.902 -1.332 0.161 D 139 137 3 140 3 0 0 42 62 -6.412 -1.925 -0.464 IL 140 140 3 140 3 1 1 45 65 -1.545 -0.726 -4.245 0.000 0.000 0.000 0.000 [ MATL 42 ] 56 - u - - - ML 141 140 3 143 3 1 1 43 62 -8.016 -0.020 -6.670 -0.059 -0.246 -0.671 0.649 D 142 140 3 143 3 0 0 42 61 -6.722 -0.920 -1.114 IL 143 143 3 143 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 57 - U - - - ML 144 143 3 146 3 1 1 42 61 -8.084 -0.019 -6.738 -0.541 -0.440 -1.450 1.144 D 145 143 3 146 3 0 0 40 60 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 58 - u - - - ML 147 146 3 149 3 1 1 41 60 -8.084 -0.046 -5.189 -0.501 -0.027 -0.892 0.826 D 148 146 3 149 3 0 0 39 59 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 59 - u - - - ML 150 149 3 152 3 1 1 40 59 -8.057 -0.075 -4.414 -0.322 0.066 -0.824 0.668 D 151 149 3 152 3 0 0 38 58 -6.414 -1.927 -0.463 IL 152 152 3 152 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 60 - A - - - ML 153 152 3 155 3 1 1 39 58 -8.003 -0.020 -6.657 1.449 -1.740 -0.866 -1.243 D 154 152 3 155 3 0 0 37 57 -6.806 -0.849 -1.198 IL 155 155 3 155 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 61 - U - - - ML 156 155 3 158 3 1 1 38 57 -8.084 -0.019 -6.738 -0.824 -1.188 -1.771 1.435 D 157 155 3 158 3 0 0 36 56 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 62 - G - - - ML 159 158 3 161 3 1 1 37 56 -8.084 -0.019 -6.738 -1.834 -3.092 1.775 -2.480 D 160 158 3 161 3 0 0 35 55 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 63 - A - - - ML 162 161 3 164 3 1 1 35 55 -8.084 -0.019 -6.738 1.221 -1.340 -0.658 -0.645 D 163 161 3 164 3 0 0 34 53 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 64 - G - - - ML 165 164 3 167 3 1 1 34 53 -8.084 -0.019 -6.738 -1.195 -2.629 1.659 -2.038 D 166 164 3 167 3 0 0 33 52 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 65 - U - - - ML 168 167 3 170 3 1 1 33 52 -8.084 -0.019 -6.738 -0.824 -1.188 -1.771 1.435 D 169 167 3 170 3 0 0 32 51 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 66 - G - - - ML 171 170 3 173 3 1 1 32 51 -8.084 -0.019 -6.738 -1.834 -3.092 1.775 -2.480 D 172 170 3 173 3 0 0 31 50 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 67 - A - - - ML 174 173 3 176 3 1 1 31 50 -8.084 -0.019 -6.738 1.766 -2.614 -2.222 -2.180 D 175 173 3 176 3 0 0 30 49 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 68 - a - - - ML 177 176 3 179 3 1 1 30 49 -5.137 -0.056 -6.738 0.878 -0.810 -0.280 -0.379 D 178 176 3 179 3 0 0 28 47 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 32 51 -1.529 -0.737 -4.229 0.000 0.000 0.000 0.000 [ MATL 55 ] 70 - A - - - ML 180 179 3 182 3 1 1 29 48 -8.084 -0.051 -4.997 1.229 -0.883 -1.263 -0.522 D 181 179 3 182 3 0 0 28 47 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 71 - c - - - ML 183 182 3 185 3 1 1 28 46 -8.052 -0.019 -6.706 -0.066 0.563 -0.986 0.088 D 184 182 3 185 3 0 0 26 45 -6.461 -1.201 -0.853 IL 185 185 3 185 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 72 - a - - - ML 186 185 3 188 3 1 1 27 45 -8.084 -0.019 -6.738 0.945 -0.693 -0.817 -0.170 D 187 185 3 188 3 0 0 25 44 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 73 - u - - - ML 189 188 3 191 3 1 1 25 44 -3.776 -0.157 -5.048 -0.241 -0.356 -1.093 0.928 D 190 188 3 191 3 0 0 23 42 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 26 45 -1.674 -0.647 -4.374 0.000 0.000 0.000 0.000 [ MATL 59 ] 75 - a - - - ML 192 191 3 194 3 1 1 24 43 -3.886 -0.172 -4.478 0.630 -0.553 -0.750 0.234 D 193 191 3 194 3 0 0 22 41 -6.449 -1.218 -0.840 IL 194 194 3 194 3 1 1 25 44 -1.653 -0.659 -4.353 0.000 0.000 0.000 0.000 [ MATL 60 ] 77 - a - - - ML 195 194 3 197 3 1 1 22 41 -8.033 -0.065 -4.642 0.929 -0.765 -0.546 -0.280 D 196 194 3 197 3 0 0 21 40 -6.604 -2.117 -0.397 IL 197 197 3 197 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 78 - u - - - ML 198 197 3 200 3 1 1 21 40 -7.989 -0.020 -6.643 -0.253 0.146 -0.695 0.523 D 199 197 3 200 3 0 0 20 39 -6.889 -2.402 -0.318 IL 200 200 3 200 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 79 - A - - - ML 201 200 3 203 3 1 1 20 39 -7.989 -0.020 -6.643 1.407 -1.677 -0.758 -1.170 D 202 200 3 203 3 0 0 19 38 -6.889 -0.786 -1.281 IL 203 203 3 203 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 80 - G - - - ML 204 203 3 206 3 1 1 19 37 -8.084 -0.019 -6.738 -1.217 -2.216 1.564 -1.326 D 205 203 3 206 3 0 0 18 37 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 81 - U - - - ML 207 206 3 209 3 1 1 17 36 -8.084 -0.019 -6.738 -1.710 -1.667 -2.454 1.677 D 208 206 3 209 3 0 0 17 36 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 82 - C - - - ML 210 209 3 212 3 1 1 16 35 -8.084 -0.019 -6.738 -2.034 1.695 -2.865 -1.389 D 211 209 3 212 3 0 0 16 34 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 83 - U - - - ML 213 212 3 215 3 1 1 15 33 -8.084 -0.019 -6.738 -1.710 -1.667 -2.454 1.677 D 214 212 3 215 3 0 0 15 33 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 84 - G - - - ML 216 215 3 218 3 1 1 13 31 -8.084 -0.019 -6.738 -1.834 -3.092 1.775 -2.480 D 217 215 3 218 3 0 0 13 32 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 85 - A - - - ML 219 218 3 221 2 1 1 1 1 * 0.000 1.766 -2.614 -2.222 -2.180 D 220 218 3 221 2 0 0 0 0 * 0.000 IL 221 221 3 221 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 69 ] - - - - - - E 222 221 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD101 ACC RF00186 DESC Small nucleolar RNA SNORD101 LENG 73 MAXL 157 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 17 00:20:28 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00186/CM NSEQ 26 EFFN 2.504150 CKSUM 2736876176 STATS LOCAL MSV -8.7896 0.71878 STATS LOCAL VITERBI -9.1842 0.71878 STATS LOCAL FORWARD -3.6143 0.71878 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.31801 1.49106 1.51120 1.24983 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 0.00000 * 1 2.28426 3.11064 0.21848 2.99895 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 2 2.34320 1.72091 2.26802 0.47552 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.07060 2.98892 4.02747 0.60142 0.79415 1.09861 0.40547 3 3.06599 1.96911 2.82105 0.28201 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 4 2.12858 1.59441 1.69460 0.70463 5 u - - < 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 5 2.48505 3.19676 0.18457 3.11618 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 6 0.51669 2.19536 1.98944 1.86162 7 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 7 0.38162 2.66580 1.89647 2.32683 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 8 2.68266 2.63431 3.20291 0.19942 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 9 2.77942 3.66791 0.13541 3.24315 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 10 0.14252 3.31659 3.03314 3.02845 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 11 2.68266 2.63431 3.20291 0.19942 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 12 2.77942 3.66791 0.13541 3.24315 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 13 0.14252 3.31659 3.03314 3.02845 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 14 2.00065 0.45781 2.76244 1.77818 15 C - - _ 1.38629 1.38629 1.38629 1.38629 0.09331 4.02747 2.64125 1.46634 0.26236 1.09861 0.40547 15 2.58396 2.55236 3.10029 0.22116 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03838 3.97253 3.97253 1.46634 0.26236 0.40549 1.09856 16 1.69918 2.07962 2.10743 0.56100 17 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05681 3.28584 4.02747 1.24438 0.33985 1.09861 0.40547 17 1.20271 1.81336 1.41114 1.22877 21 a - - _ 1.38629 1.38629 1.38629 1.38629 0.07689 2.87904 4.02747 1.19106 0.36226 1.09861 0.40547 18 0.51364 2.29472 2.14498 1.69376 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.11949 3.27946 2.59060 0.77366 0.61863 1.09861 0.40547 19 0.83766 2.06407 1.65433 1.38981 27 a - - _ 1.38629 1.38629 1.38629 1.38629 0.08565 2.76163 3.96861 0.51849 0.90490 0.38889 1.13261 20 1.96312 2.15219 2.03156 0.49066 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06186 3.16611 4.02747 1.41140 0.27945 1.09861 0.40547 21 2.68266 2.63431 3.20291 0.19942 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 22 2.77942 3.66791 0.13541 3.24315 35 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 23 2.68266 2.63431 3.20291 0.19942 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 24 2.94009 0.18345 3.51639 2.46463 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 25 2.77942 3.66791 0.13541 3.24315 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 26 2.77942 3.66791 0.13541 3.24315 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 27 0.14252 3.31659 3.03314 3.02845 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 28 2.68266 2.63431 3.20291 0.19942 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 29 0.14252 3.31659 3.03314 3.02845 42 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 30 2.94009 0.18345 3.51639 2.46463 43 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 31 2.94009 0.18345 3.51639 2.46463 44 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 32 2.94009 0.18345 3.51639 2.46463 45 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 33 2.94009 0.18345 3.51639 2.46463 46 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 34 2.68266 2.63431 3.20291 0.19942 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 35 1.87751 2.21973 2.60613 0.40861 48 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 36 2.94009 0.18345 3.51639 2.46463 49 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 37 0.14252 3.31659 3.03314 3.02845 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 38 2.94009 0.18345 3.51639 2.46463 51 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 39 2.29057 2.01228 2.80490 0.35013 52 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 40 2.94009 0.18345 3.51639 2.46463 53 C - - _ 1.38629 1.38629 1.38629 1.38629 0.05703 4.02747 3.28037 1.46634 0.26236 1.09861 0.40547 41 1.91758 0.73114 2.35118 1.28583 54 c - - _ 1.38629 1.38629 1.38629 1.38629 0.10699 2.96893 2.99363 0.60142 0.79415 1.41363 0.27873 42 1.43427 1.55593 1.85692 0.92997 56 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03828 3.97503 3.97503 1.46634 0.26236 0.41686 1.07620 43 1.79457 1.70372 2.43861 0.57179 57 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 44 1.76436 1.39774 2.01936 0.80115 58 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05728 4.02747 3.27418 1.46634 0.26236 1.09861 0.40547 45 1.63003 1.32957 1.96915 0.91652 59 u - - _ 1.38629 1.38629 1.38629 1.38629 0.08112 4.00724 2.81781 1.46634 0.26236 1.41682 0.27771 46 0.36012 2.65750 2.00945 2.32053 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03868 3.96480 3.96480 1.46634 0.26236 0.37404 1.16458 47 2.00896 2.26873 2.68628 0.36486 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 48 2.77942 3.66791 0.13541 3.24315 62 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 49 0.52093 2.35497 1.85642 1.86494 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 50 2.28929 3.31644 0.21329 2.91037 64 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 51 2.00896 2.26873 2.68628 0.36486 65 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 52 2.77942 3.66791 0.13541 3.24315 66 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 53 0.14252 3.31659 3.03314 3.02845 67 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 54 0.76436 1.96129 1.58128 1.67142 68 a - - _ 1.38629 1.38629 1.38629 1.38629 0.06517 3.09500 4.02747 0.65971 0.72774 1.09861 0.40547 55 0.51265 2.01632 2.30865 1.78050 70 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06186 4.02747 3.16611 1.46634 0.26236 1.09861 0.40547 56 1.44395 0.97300 2.09266 1.33674 71 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03721 4.00282 4.00282 1.46634 0.26236 0.61257 0.78079 57 0.71469 1.87875 1.97319 1.51932 72 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 58 1.56856 1.63840 2.16799 0.72782 73 u - - _ 1.38629 1.38629 1.38629 1.38629 0.14587 2.35650 3.19472 0.34126 1.24088 1.09861 0.40547 59 0.93924 1.77880 1.91967 1.22560 75 a - - _ 1.38629 1.38629 1.38629 1.38629 0.15877 2.41592 2.85561 0.36810 1.17781 0.62578 0.76538 60 0.72727 1.92944 1.77534 1.59889 77 a - - _ 1.38629 1.38629 1.38629 1.38629 0.07352 3.98834 2.94980 1.46634 0.26236 1.63962 0.21574 61 1.57969 1.27108 1.87575 1.02112 78 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03911 3.95394 3.95394 1.46634 0.26236 1.94281 0.15467 62 0.38925 2.61022 1.92961 2.26612 79 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03911 3.95394 3.95394 1.46634 0.26236 0.33772 1.24966 63 2.31376 3.01375 0.27621 2.37137 80 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 64 2.68266 2.63431 3.20291 0.19942 81 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 65 2.94009 0.18345 3.51639 2.46463 82 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 66 2.68266 2.63431 3.20291 0.19942 83 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 67 2.77942 3.66791 0.13541 3.24315 84 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 68 0.14252 3.31659 3.03314 3.02845 85 A - - _ 1.38629 1.38629 1.38629 1.38629 0.08119 4.02747 2.81075 1.46634 0.26236 1.09861 0.40547 69 3.38408 0.20128 3.07204 2.28201 86 C - - > 1.38629 1.38629 1.38629 1.38629 0.03792 3.98421 3.98421 1.46634 0.26236 0.46524 0.98881 70 0.79434 1.91405 1.37397 1.91365 87 a - - > 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 71 0.31981 3.00874 1.80611 2.81231 88 A - - > 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 72 0.53516 2.46112 1.55739 2.13368 89 A - - > 1.38629 1.38629 1.38629 1.38629 0.03629 4.02747 4.02747 1.46634 0.26236 1.09861 0.40547 73 3.23698 0.24048 2.93563 2.10894 90 C - - > 1.38629 1.38629 1.38629 1.38629 0.01831 4.00949 * 1.46634 0.26236 0.00000 * //