INFERNAL1/a [1.1.4 | Dec 2020] NAME s2m ACC RF00164 DESC Coronavirus 3' stem-loop II-like motif (s2m) STATES 133 NODES 33 CLEN 43 W 57 ALPH RNA RF no CONS yes MAP yes DATE Tue Jan 5 14:30:22 2021 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 /hps/nobackup/production/xfam/rfam/RELEASES/14.5/3D_families/ioanna/RF00164/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 39 EFFN 7.831421 CKSUM 2134133334 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 50.00 NC 47.80 EFP7GF -17.5211 0.71950 ECMLC 0.70090 -3.83902 4.16266 1600000 327255 0.003667 ECMGC 0.43906 -19.43935 -5.21146 1600000 206573 0.001936 ECMLI 0.69273 -2.87863 4.93896 1600000 269837 0.004447 ECMGI 0.46205 -16.47076 -3.50004 1600000 160273 0.002496 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 57 76 -8.368 -8.575 -0.020 -6.989 IL 1 1 2 1 4 1 9 62 81 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 8 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 3 - g - - - ML 3 2 3 5 3 1 9 57 76 -9.650 -0.008 -7.968 -0.544 0.277 0.461 -0.462 D 4 2 3 5 3 0 2 56 75 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 6 58 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 46 - u - - MR 6 5 3 8 5 1 9 56 75 -8.331 -0.016 -8.147 -8.359 -9.250 0.245 0.043 -0.780 0.266 D 7 5 3 8 5 0 1 55 74 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 5 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 4 45 g c - - MP 9 8 3 13 6 2 9 55 74 -9.821 -9.760 -0.032 -5.968 -8.816 -9.211 -1.879 -1.666 -2.723 1.894 -2.802 -3.527 1.099 -3.092 -2.842 2.178 -3.363 -0.657 1.327 -2.811 -0.853 -1.136 ML 10 8 3 13 6 1 2 54 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 3 54 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 4 55 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 4 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 5 44 g c - - MP 15 14 6 19 6 2 9 53 72 -9.802 -9.741 -0.013 -8.517 -8.797 -9.192 -4.038 -3.069 -3.993 1.971 -4.296 -4.748 0.226 -4.332 -4.178 2.603 -4.577 -0.743 1.710 -4.014 -1.776 -2.928 ML 16 14 6 19 6 1 1 51 70 -6.617 -6.963 -1.677 -1.372 -6.813 -1.868 0.884 -0.757 -0.490 -0.233 MR 17 14 6 19 6 1 2 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 4 53 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 4 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 6 43 u a - - MP 21 20 6 25 6 2 8 51 70 -9.802 -9.741 -0.013 -8.517 -8.797 -9.192 -3.653 -3.500 -3.729 1.623 -3.059 -4.555 1.948 -3.604 -3.702 1.160 -4.224 -1.400 2.317 -3.883 -0.704 -2.597 ML 22 20 6 25 6 1 2 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 2 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 48 67 -9.502 -8.200 -3.997 -1.697 -4.697 -0.772 IL 25 25 5 25 6 1 3 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 3 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 7 42 G C - - MP 27 26 6 31 6 2 6 49 68 -9.802 -9.741 -0.013 -8.517 -8.797 -9.192 -4.258 -2.982 -4.126 1.783 -4.917 -4.748 0.958 -4.665 -4.430 3.070 -4.733 -0.619 -0.445 -4.033 -2.154 -3.067 ML 28 26 6 31 6 1 2 49 68 -6.617 -6.963 -0.896 -1.372 -6.813 -4.342 0.110 -0.768 0.570 -0.235 MR 29 26 6 31 6 1 2 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 2 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 2 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 8 41 C G - - MP 33 32 6 37 4 2 5 47 66 -8.368 -8.575 -0.020 -6.989 -6.104 -6.275 -5.504 -2.432 -3.907 -5.703 3.753 -4.810 -5.591 -2.352 -5.738 -4.459 -0.555 -5.993 0.187 -4.387 ML 34 32 6 37 4 1 1 48 67 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 1 48 67 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 0 47 66 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 2 50 69 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 2 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 9 - C - - - ML 39 38 6 41 3 1 4 45 63 -9.318 -0.008 -7.972 -4.483 1.941 -5.089 -3.555 D 40 38 6 41 3 0 0 44 63 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 10 - G - - - ML 42 41 3 44 3 1 3 44 62 -9.318 -0.008 -7.972 -2.233 -4.479 1.878 -3.898 D 43 41 3 44 3 0 0 43 62 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - a - - - ML 45 44 3 47 3 1 2 43 61 -9.318 -0.008 -7.972 0.733 -0.023 -0.469 -0.663 D 46 44 3 47 3 0 0 42 61 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 1 45 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - G - - - ML 48 47 3 50 3 1 2 42 60 -9.650 -0.008 -7.968 -3.167 -4.293 1.913 -3.790 D 49 47 3 50 3 0 0 40 59 -5.620 -0.734 -1.403 IL 50 50 3 50 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 40 - A - - MR 51 50 3 53 3 1 2 41 59 -9.650 -0.008 -7.968 1.954 -4.858 -4.312 -4.574 D 52 50 3 53 3 0 0 39 58 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 39 - C - - MR 54 53 3 56 3 1 1 40 58 -9.650 -0.008 -7.968 -4.483 1.941 -5.089 -3.555 D 55 53 3 56 3 0 0 38 57 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 38 - A - - MR 57 56 3 59 5 1 1 39 57 -8.331 -0.016 -8.147 -8.359 -9.250 1.954 -4.858 -4.312 -4.574 D 58 56 3 59 5 0 0 37 56 -5.352 -0.707 -2.978 -4.409 -2.404 IR 59 59 3 59 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 13 37 G U - - MP 60 59 3 64 6 2 2 38 56 -9.821 -9.760 -0.013 -8.537 -8.816 -9.211 -5.107 -3.684 -5.371 0.282 -7.037 -7.494 -2.480 -1.454 -4.841 -0.503 -5.395 3.706 -2.673 -6.461 -4.386 -3.940 ML 61 59 3 64 6 1 1 37 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 3 64 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 3 64 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 14 36 C G - - MP 66 65 6 70 6 2 2 36 54 -9.821 -9.760 -0.013 -8.537 -8.816 -9.211 -7.411 -7.555 -6.532 -3.777 -4.899 -6.571 3.936 -6.100 -6.890 -3.744 -6.605 -5.738 -1.893 -7.313 -2.903 -5.693 ML 67 65 6 70 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 36 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 15 35 C G - - MP 72 71 6 76 4 2 2 33 52 -8.368 -8.575 -0.020 -6.989 -7.411 -7.555 -6.532 -3.777 -4.899 -6.571 3.936 -6.100 -6.890 -3.744 -6.605 -5.738 -1.893 -7.313 -2.903 -5.693 ML 73 71 6 76 4 1 1 35 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 4 1 1 34 53 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 75 71 6 76 4 0 0 33 52 -4.568 -4.250 -2.265 -0.520 IL 76 76 5 76 4 1 1 36 55 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 16 - A - - - ML 78 77 6 80 3 1 1 31 49 -9.650 -0.008 -7.968 1.954 -4.858 -4.312 -4.574 D 79 77 6 80 3 0 0 30 48 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 1 32 50 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 34 - G - - MR 81 80 3 83 3 1 1 30 48 -9.650 -0.008 -7.968 -3.915 -5.401 1.952 -4.650 D 82 80 3 83 3 0 0 28 47 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 31 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 33 - A - - MR 84 83 3 86 5 1 1 29 47 -8.331 -0.016 -8.147 -8.359 -9.250 1.889 -3.757 -3.625 -2.828 D 85 83 3 86 5 0 0 28 46 -5.352 -0.707 -2.978 -4.409 -2.404 IR 86 86 3 86 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 32 C G - - MP 87 86 3 91 6 2 2 28 46 -9.821 -9.760 -0.013 -8.537 -8.816 -9.211 -7.411 -7.555 -6.532 -3.777 -4.899 -6.571 3.936 -6.100 -6.890 -3.744 -6.605 -5.738 -1.893 -7.313 -2.903 -5.693 ML 88 86 3 91 6 1 1 27 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 3 91 6 1 1 27 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 3 91 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 28 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 31 G C - - MP 93 92 6 97 4 2 2 26 44 -8.209 -9.454 -0.031 -5.908 -6.552 -4.115 -6.916 -1.172 -7.644 -5.448 -2.524 -7.350 -5.529 3.861 -5.747 -1.945 -2.849 -2.015 -4.682 -5.867 ML 94 92 6 97 4 1 1 25 44 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 1 25 44 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 0 23 42 -12.737 -14.007 -2.036 -0.404 IL 97 97 5 97 4 1 1 26 44 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 1 26 44 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 30 - U - - MR 99 98 6 101 3 1 1 24 42 -9.650 -0.008 -7.968 -0.712 -0.992 -2.398 1.432 D 100 98 6 101 3 0 0 23 41 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 25 43 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 29 - A - - MR 102 101 3 104 5 1 1 23 41 -8.331 -0.016 -8.147 -8.359 -9.250 1.878 -2.880 -3.443 -3.381 D 103 101 3 104 5 0 0 22 40 -5.352 -0.707 -2.978 -4.409 -2.404 IR 104 104 3 104 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 19 28 C G - - MP 105 104 3 109 6 2 2 22 40 -9.821 -9.760 -0.013 -8.537 -8.816 -9.211 -5.815 -5.690 -5.383 -1.800 -3.935 -5.736 3.719 -4.767 -5.408 0.124 -5.639 -3.522 -0.430 -5.846 -1.607 -4.209 ML 106 104 3 109 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 3 109 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 3 109 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 22 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 20 27 g c - - MP 111 110 6 115 4 2 2 20 38 -8.368 -8.575 -0.020 -6.989 -3.314 -2.964 -3.387 0.508 -3.234 -4.156 2.380 -3.596 -3.488 2.449 -1.621 -0.946 0.546 -1.903 -1.010 -2.430 ML 112 110 6 115 4 1 1 22 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 114 110 6 115 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 115 115 5 115 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 116 116 6 116 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 21 - G - - - ML 117 116 6 119 3 1 1 17 35 -9.318 -0.008 -7.972 -3.915 -5.401 1.952 -4.650 D 118 116 6 119 3 0 0 17 35 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 22 - A - - - ML 120 119 3 122 3 1 1 16 34 -9.318 -0.008 -7.972 1.677 -1.867 -1.588 -2.358 D 121 119 3 122 3 0 0 16 34 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 23 - G - - - ML 123 122 3 125 3 1 1 14 32 -9.318 -0.008 -7.972 -3.915 -5.401 1.952 -4.650 D 124 122 3 125 3 0 0 15 33 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 24 - U - - - ML 126 125 3 128 3 1 1 13 28 -4.583 -0.067 -7.972 -2.231 -2.654 -3.518 1.824 D 127 125 3 128 3 0 0 11 26 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 15 30 -1.750 -0.606 -4.450 0.000 0.000 0.000 0.000 [ MATL 31 ] 26 - A - - - ML 129 128 3 131 2 1 1 1 1 * 0.000 1.891 -4.015 -2.673 -3.809 D 130 128 3 131 2 0 0 0 0 * 0.000 IL 131 131 3 131 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 32 ] - - - - - - E 132 131 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME s2m ACC RF00164 DESC Coronavirus 3' stem-loop II-like motif (s2m) LENG 43 MAXL 103 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jan 5 14:30:22 2021 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 39 EFFN 20.418823 CKSUM 2134133334 STATS LOCAL MSV -7.1597 0.71950 STATS LOCAL VITERBI -7.4272 0.71950 STATS LOCAL FORWARD -4.2750 0.71950 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.45571 1.29702 1.02630 2.00180 1.38629 1.38629 1.38629 1.38629 0.08682 2.53774 5.49441 0.72964 0.65794 0.00000 * 1 2.07361 1.05702 0.93881 1.99741 3 g - - : 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 2 1.12809 2.12867 1.07068 1.53908 4 g - - < 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 3 1.18918 3.59358 0.90505 1.33368 5 g - - < 1.38629 1.38629 1.38629 1.38629 0.03207 5.49441 3.59520 1.46634 0.26236 1.09861 0.40547 4 1.46023 1.46861 1.97739 0.91844 6 u - - < 1.38629 1.38629 1.38629 1.38629 0.00845 5.47078 5.47078 1.46634 0.26236 0.26188 1.46794 5 1.40984 2.03929 0.52855 3.31768 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 6 4.94364 0.11051 4.90993 2.40661 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 7 5.44779 0.01555 5.76521 4.82936 9 C - - - 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 8 3.12298 5.57745 0.05545 5.09403 10 G - - - 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 9 0.80335 1.30173 1.72667 2.28046 11 a - - - 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 10 4.26042 4.87161 0.03242 4.59295 12 G - - - 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 11 2.97652 3.54492 0.09121 4.91514 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 12 6.08343 0.01155 6.09787 4.96859 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 13 6.03921 0.01181 6.06730 4.95664 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 14 0.01060 5.91205 5.47628 5.61271 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 15 6.15920 0.01113 6.14927 4.98819 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 16 4.38152 5.45702 0.04227 3.70420 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 17 4.85945 0.11327 2.64754 3.55761 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 18 3.26395 0.82830 0.78945 2.64677 20 g - - < 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 19 5.01879 6.18408 0.01270 5.53505 21 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 20 0.16123 2.84192 2.65057 3.91290 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 21 5.01879 6.18408 0.01270 5.53505 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 22 3.24824 3.99219 4.61277 0.06959 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05491 3.00934 5.49441 0.15904 1.91706 1.09861 0.40547 23 0.04233 5.17185 3.53188 5.03197 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 24 3.24085 0.83291 0.74122 3.00466 27 g - - > 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 25 3.87503 2.66981 0.10523 4.61868 28 G - - > 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 26 0.04653 3.61812 4.72959 4.62558 29 A - - - 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 27 1.99987 2.25223 3.96670 0.30037 30 U - - - 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 28 5.55242 0.02628 5.38851 4.04628 31 C - - > 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 29 5.19098 6.32176 0.00953 6.15472 32 G - - > 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 30 0.04324 4.91534 4.89134 3.59437 33 A - - - 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 31 5.01879 6.18408 0.01270 5.53505 34 G - - - 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 32 5.13094 6.21319 0.01038 6.02773 35 G - - > 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 33 5.15409 6.25444 0.01005 6.07570 36 G - - > 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 34 5.10712 3.85667 5.05299 0.03416 37 U - - > 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 35 0.01060 5.91205 5.47628 5.61271 38 A - - - 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 36 5.44779 0.01555 5.76521 4.82936 39 C - - - 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 37 0.01060 5.91205 5.47628 5.61271 40 A - - - 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 38 3.83944 5.09136 0.03656 4.79817 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.03207 5.49441 3.59520 1.46634 0.26236 1.09861 0.40547 39 3.60556 0.56020 1.98726 1.32929 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.00845 5.47078 5.47078 1.46634 0.26236 2.16109 0.12239 40 0.96847 2.05818 1.39390 1.40836 43 a - - > 1.38629 1.38629 1.38629 1.38629 0.00845 5.47078 5.47078 1.46634 0.26236 2.16109 0.12239 41 1.35103 0.93116 3.46140 1.15345 44 c - - > 1.38629 1.38629 1.38629 1.38629 0.00845 5.47078 5.47078 1.46634 0.26236 0.26188 1.46794 42 1.67389 1.08627 2.00301 1.07857 45 u - - > 1.38629 1.38629 1.38629 1.38629 0.00825 5.49441 5.49441 1.46634 0.26236 1.09861 0.40547 43 1.21479 1.28746 2.02113 1.22163 46 a - - : 1.38629 1.38629 1.38629 1.38629 0.08270 2.53362 * 0.10092 2.34343 0.00000 * //