INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD82 ACC RF00158 DESC Small nucleolar RNA SNORD82 STATES 214 NODES 67 CLEN 70 W 88 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 11:57:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00158/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 27 EFFN 2.870728 CKSUM 1023502570 NULL 0.000 0.000 0.000 0.000 GA 43.00 TC 43.20 NC 42.90 EFP7GF -10.3901 0.71883 ECMLC 0.66366 -5.95578 2.96673 1600000 447563 0.002681 ECMGC 0.35556 -19.32071 -3.59355 1600000 107302 0.003728 ECMLI 0.61341 -4.80966 4.39388 1600000 339619 0.003533 ECMGI 0.38064 -13.39052 0.17950 1600000 70033 0.005712 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 88 109 -7.290 -7.497 -0.070 -4.820 IL 1 1 2 1 4 1 27 92 113 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 27 91 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 5 1 28 88 109 -7.353 -0.033 -7.169 -7.381 -8.272 0.750 -0.789 -0.291 -0.116 D 4 2 3 5 5 0 21 87 108 -5.117 -0.960 -4.378 -1.991 -2.665 IL 5 5 3 5 5 1 25 89 110 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 80 G C - - MP 6 5 3 10 6 2 28 87 108 -9.236 -9.175 -0.019 -7.951 -8.231 -8.626 -4.284 -1.366 -4.273 0.577 -5.082 -4.547 -0.416 -4.763 -4.200 3.468 -4.530 0.020 -0.685 -4.051 -2.401 -3.218 ML 7 5 3 10 6 1 22 86 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 22 86 107 -7.132 -5.861 -1.769 -5.839 -0.726 -4.052 0.173 0.073 -0.497 0.153 D 9 5 3 10 6 0 17 83 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 24 87 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 24 87 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 79 C G - - MP 12 11 6 16 6 2 26 85 106 -9.236 -9.175 -0.019 -7.951 -8.231 -8.626 -5.202 -5.163 -4.777 -1.348 -3.368 -5.102 3.711 -4.243 -4.856 -1.184 -5.039 -3.126 0.071 -5.226 -1.098 -3.676 ML 13 11 6 16 6 1 22 84 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 21 84 105 -7.132 -5.861 -1.365 -5.839 -0.973 -4.052 0.277 -0.605 0.277 -0.121 D 15 11 6 16 6 0 17 81 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 23 85 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 23 85 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 78 A U - - MP 18 17 6 22 6 2 25 83 104 -9.248 -9.187 -0.019 -7.963 -8.243 -8.638 -2.018 -3.351 -4.024 3.559 -4.502 -5.376 -0.474 -4.163 -4.117 0.482 -4.669 -0.959 -0.762 -4.558 -2.301 -3.036 ML 19 17 6 22 6 1 21 82 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 20 82 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 16 79 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 22 83 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 22 83 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 77 C G - - MP 24 23 6 28 6 2 23 81 102 -9.248 -6.344 -0.035 -7.963 -8.243 -8.638 -5.260 -5.226 -4.824 -1.408 -3.405 -5.142 3.722 -4.286 -4.907 -1.249 -5.082 -3.191 0.025 -5.280 -1.138 -3.726 ML 25 23 6 28 6 1 20 80 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 18 80 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 16 78 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 21 81 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 21 81 102 -2.505 -0.458 -6.017 -4.184 -5.290 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 75 A U - - MP 30 29 6 34 4 2 21 79 100 -7.290 -7.497 -0.081 -4.553 -4.119 -3.014 -4.162 3.503 -5.103 -5.967 -0.778 -4.259 -4.010 0.753 -4.604 0.191 -1.012 -4.916 -2.683 -2.960 ML 31 29 6 34 4 1 19 79 101 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 4 1 17 79 100 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 33 29 6 34 4 0 15 78 99 -4.568 -4.250 -2.265 -0.520 IL 34 34 5 34 4 1 20 81 102 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 35 35 6 35 3 1 20 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 36 35 6 38 3 1 20 77 98 -8.248 -0.017 -6.902 1.571 -1.925 -1.443 -1.332 D 37 35 6 38 3 0 15 76 97 -6.533 -1.113 -0.925 IL 38 38 3 38 3 1 19 79 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - a - - - ML 39 38 3 41 3 1 19 76 97 -8.284 -0.016 -6.938 0.745 -1.270 0.434 -0.839 D 40 38 3 41 3 0 13 75 96 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 18 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 42 41 3 44 3 1 18 75 96 -8.284 -0.016 -6.938 -2.094 -1.987 -2.852 1.755 D 43 41 3 44 3 0 13 74 95 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 17 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 45 44 3 47 3 1 17 74 95 -8.284 -0.016 -6.938 -2.246 -3.557 1.838 -2.941 D 46 44 3 47 3 0 12 72 94 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 17 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 48 47 3 50 3 1 17 73 94 -8.284 -0.016 -6.938 1.827 -3.020 -2.588 -2.628 D 49 47 3 50 3 0 11 71 93 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 51 50 3 53 3 1 16 72 93 -8.284 -0.016 -6.938 -2.094 -1.987 -2.852 1.755 D 52 50 3 53 3 0 11 70 92 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 15 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - G - - - ML 54 53 3 56 3 1 15 71 92 -8.284 -0.016 -6.938 -2.246 -3.557 1.838 -2.941 D 55 53 3 56 3 0 10 69 91 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 14 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 57 56 3 59 3 1 14 70 91 -8.284 -0.016 -6.938 1.658 -2.147 -2.006 -1.438 D 58 56 3 59 3 0 9 68 89 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 13 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - a - - - ML 60 59 3 62 3 1 13 69 90 -8.284 -0.016 -6.938 0.863 -0.882 -0.573 -0.048 D 61 59 3 62 3 0 9 67 88 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 13 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - u - - - ML 63 62 3 65 3 1 12 68 89 -8.284 -0.050 -5.015 -0.989 0.667 -1.806 0.698 D 64 62 3 65 3 0 8 66 87 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 12 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - a - - - ML 66 65 3 68 3 1 12 67 88 -8.251 -0.062 -4.685 0.829 -0.876 0.042 -0.623 D 67 65 3 68 3 0 7 65 86 -6.511 -1.139 -0.902 IL 68 68 3 68 3 1 11 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 69 68 3 71 3 1 12 66 87 -8.240 -0.017 -6.895 1.170 -1.174 -0.447 -0.802 D 70 68 3 71 3 0 6 64 85 -6.601 -2.114 -0.398 IL 71 71 3 71 3 1 11 68 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - C - - - ML 72 71 3 74 3 1 11 65 86 -8.240 -0.017 -6.895 -0.756 1.076 -1.439 -0.104 D 73 71 3 74 3 0 6 64 84 -6.601 -1.037 -0.993 IL 74 74 3 74 3 1 10 67 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 75 74 3 77 3 1 10 64 85 -8.284 -0.016 -6.938 1.678 -2.217 -2.054 -1.536 D 76 74 3 77 3 0 5 62 83 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 9 66 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - A - - - ML 78 77 3 80 3 1 9 63 84 -8.284 -0.040 -5.360 1.071 -0.754 -0.889 -0.385 D 79 77 3 80 3 0 4 61 82 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 9 65 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - A - - - ML 81 80 3 83 3 1 9 62 83 -8.261 -0.017 -6.915 1.821 -2.972 -2.545 -2.576 D 82 80 3 83 3 0 4 60 81 -6.421 -1.254 -0.813 IL 83 83 3 83 3 1 8 64 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - G - - - ML 84 83 3 86 3 1 9 61 82 -8.284 -0.016 -6.938 -1.574 -3.087 1.753 -2.504 D 85 83 3 86 3 0 3 59 80 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 7 62 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - G - - - ML 87 86 3 89 3 1 8 60 81 -8.284 -0.016 -6.938 -2.246 -3.557 1.838 -2.941 D 88 86 3 89 3 0 2 58 79 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 6 61 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - G - - - ML 90 89 3 92 3 1 7 59 80 -8.284 -0.016 -6.938 -2.246 -3.557 1.838 -2.941 D 91 89 3 92 3 0 2 57 78 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 6 60 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - A - - - ML 93 92 3 95 3 1 7 58 79 -8.284 -0.016 -6.938 1.827 -3.020 -2.588 -2.628 D 94 92 3 95 3 0 1 56 77 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 5 59 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - C - - - ML 96 95 3 98 3 1 6 57 78 -8.284 -0.016 -6.938 -2.525 1.782 -3.353 -1.786 D 97 95 3 98 3 0 1 55 76 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 5 58 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - U - - - ML 99 98 3 101 3 1 6 56 77 -8.284 -0.016 -6.938 -2.094 -1.987 -2.852 1.755 D 100 98 3 101 3 0 0 54 75 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 4 57 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - U - - - ML 102 101 3 104 3 1 5 55 75 -8.284 -0.016 -6.938 -2.094 -1.987 -2.852 1.755 D 103 101 3 104 3 0 0 53 74 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 4 56 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - A - - - ML 105 104 3 107 3 1 5 54 74 -8.284 -0.016 -6.938 1.827 -3.020 -2.588 -2.628 D 106 104 3 107 3 0 0 52 73 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 3 55 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - A - - - ML 108 107 3 110 3 1 4 53 73 -8.284 -0.016 -6.938 1.827 -3.020 -2.588 -2.628 D 109 107 3 110 3 0 0 51 72 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 3 54 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - U - - - ML 111 110 3 113 3 1 4 52 72 -8.284 -0.016 -6.938 -2.094 -1.987 -2.852 1.755 D 112 110 3 113 3 0 0 50 71 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 53 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - A - - - ML 114 113 3 116 3 1 3 51 71 -8.284 -0.016 -6.938 1.268 -1.432 -0.761 -0.663 D 115 113 3 116 3 0 0 49 70 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 2 52 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - C - - - ML 117 116 3 119 3 1 3 50 70 -8.284 -0.016 -6.938 -2.525 1.782 -3.353 -1.786 D 118 116 3 119 3 0 0 48 69 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 51 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - U - - - ML 120 119 3 122 3 1 3 49 69 -8.284 -0.016 -6.938 -1.216 -1.344 -1.562 1.504 D 121 119 3 122 3 0 0 47 68 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 50 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - G - - - ML 123 122 3 125 3 1 2 48 68 -8.284 -0.016 -6.938 -2.246 -3.557 1.838 -2.941 D 124 122 3 125 3 0 0 46 67 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 49 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - A - - - ML 126 125 3 128 3 1 2 46 67 -8.284 -0.016 -6.938 1.827 -3.020 -2.588 -2.628 D 127 125 3 128 3 0 0 45 66 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 48 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - A - - - ML 129 128 3 131 3 1 2 45 66 -8.284 -0.016 -6.938 1.075 -0.969 -0.687 -0.392 D 130 128 3 131 3 0 0 44 65 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 47 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - A - - - ML 132 131 3 134 3 1 1 44 65 -8.284 -0.016 -6.938 1.138 -0.911 -0.715 -0.602 D 133 131 3 134 3 0 0 43 63 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 46 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - C - - - ML 135 134 3 137 3 1 1 43 64 -4.103 -0.099 -6.938 -1.153 1.439 -2.229 -0.677 D 136 134 3 137 3 0 0 41 62 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 45 66 -1.322 -0.844 -4.541 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - c - - - ML 138 137 3 140 3 1 1 41 61 -8.284 -0.016 -6.938 -0.472 0.876 -1.067 -0.049 D 139 137 3 140 3 0 0 40 60 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 43 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - U - - - ML 141 140 3 143 3 1 1 40 60 -8.284 -0.016 -6.938 -1.039 -1.409 -2.046 1.533 D 142 140 3 143 3 0 0 39 59 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 42 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - G - - - ML 144 143 3 146 3 1 1 39 59 -8.284 -0.016 -6.938 -2.246 -3.557 1.838 -2.941 D 145 143 3 146 3 0 0 38 58 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 46 - A - - - ML 147 146 3 149 3 1 1 38 58 -8.284 -0.016 -6.938 1.396 -1.336 -0.965 -1.118 D 148 146 3 149 3 0 0 37 57 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 47 - U - - - ML 150 149 3 152 3 1 1 37 57 -8.284 -0.016 -6.938 -1.113 -1.290 -1.339 1.451 D 151 149 3 152 3 0 0 36 56 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 48 - G - - - ML 153 152 3 155 3 1 1 36 56 -8.284 -0.016 -6.938 -0.881 -2.584 1.606 -2.017 D 154 152 3 155 3 0 0 35 55 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 49 - U - - - ML 156 155 3 158 3 1 1 35 55 -8.284 -0.016 -6.938 -0.769 -0.577 -1.692 1.283 D 157 155 3 158 3 0 0 34 54 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 50 - u - - - ML 159 158 3 161 3 1 1 34 54 -8.284 -0.016 -6.938 -0.096 -0.648 -0.182 0.628 D 160 158 3 161 3 0 0 33 53 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 51 - A - - - ML 162 161 3 164 3 1 1 33 53 -8.284 -0.016 -6.938 1.200 -1.092 -0.729 -0.667 D 163 161 3 164 3 0 0 32 52 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 52 - c - - - ML 165 164 3 167 3 1 1 32 52 -5.267 -0.050 -6.938 -0.460 0.627 -1.493 0.458 D 166 164 3 167 3 0 0 30 50 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 34 54 -1.383 -0.820 -4.321 0.000 0.000 0.000 0.000 [ MATL 51 ] 55 - A - - - ML 168 167 3 170 3 1 1 31 50 -5.534 -0.074 -5.144 1.374 -1.512 -1.164 -0.710 D 169 167 3 170 3 0 0 29 48 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 32 52 -1.517 -0.745 -4.217 0.000 0.000 0.000 0.000 [ MATL 52 ] 57 - u - - - ML 171 170 3 173 3 1 1 29 49 -8.255 -0.083 -4.250 -0.295 0.074 -1.355 0.800 D 172 170 3 173 3 0 0 28 48 -6.475 -1.183 -0.867 IL 173 173 3 173 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 58 - U - - - ML 174 173 3 176 3 1 1 28 48 -8.220 -0.069 -4.526 -0.650 -1.219 -1.763 1.400 D 175 173 3 176 3 0 0 27 46 -6.759 -2.272 -0.351 IL 176 176 3 176 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 59 - g - - - ML 177 176 3 179 3 1 1 27 47 -8.169 -0.018 -6.823 0.103 -0.865 0.457 0.006 D 178 176 3 179 3 0 0 26 45 -7.089 -1.438 -0.681 IL 179 179 3 179 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 60 - u - - - ML 180 179 3 182 3 1 1 26 46 -8.220 -0.057 -4.810 -0.175 -0.076 -0.448 0.518 D 181 179 3 182 3 0 0 25 44 -6.759 -2.272 -0.351 IL 182 182 3 182 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 61 - a - - - ML 183 182 3 185 3 1 1 25 45 -8.181 -0.018 -6.835 0.644 -0.647 -0.129 -0.177 D 184 182 3 185 3 0 0 24 43 -7.022 -1.150 -0.884 IL 185 185 3 185 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 62 - a - - - ML 186 185 3 188 3 1 1 24 43 -3.424 -0.155 -6.900 0.922 -1.346 0.084 -0.619 D 187 185 3 188 3 0 0 22 40 -6.552 -1.091 -0.944 IL 188 188 3 188 3 1 1 26 45 -1.407 -0.778 -4.650 0.000 0.000 0.000 0.000 [ MATL 58 ] 66 - U - - - ML 189 188 3 191 3 1 1 21 40 -4.919 -0.061 -6.938 -0.543 -0.563 -1.270 1.152 D 190 188 3 191 3 0 0 20 38 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 23 41 -1.561 -0.715 -4.262 0.000 0.000 0.000 0.000 [ MATL 59 ] 68 - g - - - ML 192 191 3 194 3 1 1 20 38 -8.284 -0.016 -6.938 0.369 -1.088 0.640 -0.557 D 193 191 3 194 3 0 0 19 38 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 69 - U - - - ML 195 194 3 197 3 1 1 19 37 -8.284 -0.166 -3.245 -0.523 -1.097 -1.174 1.259 D 196 194 3 197 3 0 0 18 37 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 70 - g - - - ML 198 197 3 200 3 1 1 17 36 -8.136 -0.018 -6.791 -0.238 -1.304 0.954 -0.304 D 199 197 3 200 3 0 0 16 35 -7.260 -0.566 -1.652 IL 200 200 3 200 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 71 - C - - - ML 201 200 3 203 3 1 1 16 35 -8.284 -0.016 -6.938 -2.525 1.782 -3.353 -1.786 D 202 200 3 203 3 0 0 16 34 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 72 - U - - - ML 204 203 3 206 3 1 1 15 33 -8.284 -0.016 -6.938 -2.094 -1.987 -2.852 1.755 D 205 203 3 206 3 0 0 15 33 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 73 - G - - - ML 207 206 3 209 3 1 1 13 31 -8.284 -0.016 -6.938 -2.246 -3.557 1.838 -2.941 D 208 206 3 209 3 0 0 13 32 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 74 - A - - - ML 210 209 3 212 2 1 1 1 1 * 0.000 1.827 -3.020 -2.588 -2.628 D 211 209 3 212 2 0 0 0 0 * 0.000 IL 212 212 3 212 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 66 ] - - - - - - E 213 212 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD82 ACC RF00158 DESC Small nucleolar RNA SNORD82 LENG 70 MAXL 150 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 11:57:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00158/CM NSEQ 27 EFFN 3.134399 CKSUM 1023502570 STATS LOCAL MSV -8.0845 0.71883 STATS LOCAL VITERBI -9.1806 0.71883 STATS LOCAL FORWARD -3.6877 0.71883 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.16732 1.70757 1.41133 1.33303 1.38629 1.38629 1.38629 1.38629 0.05147 4.17050 3.36037 1.46634 0.26236 0.00000 * 1 0.85790 1.94492 1.58860 1.47518 1 a - - : 1.38629 1.38629 1.38629 1.38629 0.03200 4.15103 4.15103 1.46634 0.26236 1.44649 0.26839 2 2.10245 2.96725 0.26495 2.82757 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03200 4.15103 4.15103 1.46634 0.26236 1.44649 0.26839 3 3.52436 0.17329 3.33461 2.36439 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03200 4.15103 4.15103 1.46634 0.26236 0.63637 0.75335 4 0.23665 3.08065 2.18905 2.94167 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 5 3.55808 0.16707 3.37528 2.39517 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 6 0.29648 3.26338 1.76261 3.06376 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.05926 4.17050 3.16789 1.46634 0.26236 1.09861 0.40547 7 0.28120 2.77421 2.42595 2.36098 7 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03225 4.14349 4.14349 1.46634 0.26236 0.55034 0.85980 8 0.86125 2.29724 1.06993 2.01141 8 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 9 2.94146 2.85028 3.47014 0.15284 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 10 3.04909 3.96999 0.10010 3.54115 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 11 0.10672 3.58742 3.27882 3.32755 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 12 2.94146 2.85028 3.47014 0.15284 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 13 3.04909 3.96999 0.10010 3.54115 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 14 0.22079 2.94137 2.84759 2.43799 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 15 0.77717 2.01479 1.79179 1.42592 15 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 16 2.12307 0.90423 2.69519 0.89661 16 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05728 4.17050 3.21321 1.46634 0.26236 1.09861 0.40547 17 0.80081 2.00689 1.34904 1.85063 17 a - - _ 1.38629 1.38629 1.38629 1.38629 0.06720 4.14540 3.01287 1.46634 0.26236 0.56977 0.83392 18 0.55966 2.22460 1.70158 1.97987 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03245 4.13747 4.13747 1.46634 0.26236 1.62993 0.21809 19 1.94997 0.61578 2.42054 1.47566 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03245 4.13747 4.13747 1.46634 0.26236 0.49739 0.93678 20 0.20748 2.99227 2.88350 2.51007 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 21 0.62813 1.91968 2.02342 1.67368 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04974 4.17050 3.40880 1.46634 0.26236 1.09861 0.40547 22 0.11059 3.55385 3.24825 3.29051 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03195 4.15271 4.15271 1.46634 0.26236 0.65946 0.72801 23 2.54549 3.62340 0.15667 3.22179 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 24 3.04909 3.96999 0.10010 3.54115 24 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 25 3.04909 3.96999 0.10010 3.54115 25 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 26 0.10672 3.58742 3.27882 3.32755 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 27 3.26600 0.13344 3.83541 2.73080 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 28 2.94146 2.85028 3.47014 0.15284 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 29 2.94146 2.85028 3.47014 0.15284 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 30 0.10672 3.58742 3.27882 3.32755 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 31 0.10672 3.58742 3.27882 3.32755 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 32 2.94146 2.85028 3.47014 0.15284 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 33 0.49160 2.41689 1.92853 1.87214 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 34 3.26600 0.13344 3.83541 2.73080 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 35 2.29633 2.37516 2.51174 0.32124 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 36 3.04909 3.96999 0.10010 3.54115 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 37 0.10672 3.58742 3.27882 3.32755 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 38 0.62673 2.07606 1.87587 1.67655 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 39 0.58176 2.03226 1.89682 1.83258 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 40 2.24175 0.36414 3.00917 1.89980 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.09513 2.58624 4.17050 0.83846 0.56630 1.09861 0.40547 41 1.73955 0.75680 2.14541 1.43459 43 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 42 2.15467 2.42171 2.87443 0.30267 44 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 43 3.04909 3.96999 0.10010 3.54115 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 44 0.40175 2.33985 2.07762 2.21383 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 45 2.22092 2.33485 2.34779 0.35798 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 46 2.03687 3.25628 0.25587 2.86842 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 47 1.95673 1.80204 2.60944 0.47781 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 48 1.46145 1.84775 1.50600 0.94491 50 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 49 0.53825 2.16396 1.90713 1.87827 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 50 1.72913 0.93123 2.46227 1.06929 52 c - - _ 1.38629 1.38629 1.38629 1.38629 0.05728 3.21321 4.17050 0.96889 0.47723 1.09861 0.40547 51 0.41721 2.47568 2.22333 1.90538 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.07559 3.33954 3.28745 0.72034 0.66668 1.09861 0.40547 52 1.60612 1.32564 2.35777 0.82309 57 u - - _ 1.38629 1.38629 1.38629 1.38629 0.08320 4.14835 2.74817 1.46634 0.26236 0.60269 0.79260 53 1.86938 2.28181 2.66757 0.39414 58 U - - _ 1.38629 1.38629 1.38629 1.38629 0.07318 4.12215 2.91225 1.46634 0.26236 1.80104 0.18048 54 1.32233 2.00312 1.05170 1.38939 59 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03429 4.08326 4.08326 1.46634 0.26236 0.91941 0.50875 55 1.51832 1.43324 1.69535 1.02485 60 u - - _ 1.38629 1.38629 1.38629 1.38629 0.06408 4.12215 3.08220 1.46634 0.26236 1.80104 0.18048 56 0.93349 1.84101 1.47168 1.52040 61 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03398 4.09205 4.09205 1.46634 0.26236 0.66478 0.72234 57 0.73484 2.35532 1.31980 1.84286 62 a - - _ 1.38629 1.38629 1.38629 1.38629 0.13914 2.17157 4.14184 0.64149 0.74762 0.53470 0.88151 58 1.78839 1.78991 2.29351 0.57113 66 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06547 3.03796 4.17050 0.55376 0.85516 1.09861 0.40547 59 1.13313 2.16278 0.92236 1.79943 68 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 60 1.77596 2.18816 2.22635 0.49325 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.14715 4.17050 2.10877 1.46634 0.26236 1.09861 0.40547 61 1.57193 2.32576 0.70195 1.61430 70 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03516 4.05851 4.05851 1.46634 0.26236 0.22671 1.59529 62 3.26600 0.13344 3.83541 2.73080 71 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 63 2.94146 2.85028 3.47014 0.15284 72 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 64 3.04909 3.96999 0.10010 3.54115 73 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 65 0.10672 3.58742 3.27882 3.32755 74 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 66 3.25944 2.24319 3.05499 0.21276 75 U - - > 1.38629 1.38629 1.38629 1.38629 0.05728 3.21321 4.17050 0.64562 0.74304 1.09861 0.40547 67 2.67175 3.53639 0.14447 3.31687 77 G - - > 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 68 2.90539 2.44885 2.88479 0.21938 78 U - - > 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 69 2.63388 3.49045 0.15103 3.27303 79 G - - > 1.38629 1.38629 1.38629 1.38629 0.03138 4.17050 4.17050 1.46634 0.26236 1.09861 0.40547 70 3.03908 0.31863 2.77785 1.81519 80 C - - > 1.38629 1.38629 1.38629 1.38629 0.03577 3.34848 * 0.73572 0.65232 0.00000 * //