INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD63 ACC RF00154 DESC Small nucleolar RNA SNORD63 STATES 214 NODES 68 CLEN 70 W 97 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 14:21:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00154/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 23 EFFN 2.849731 CKSUM 2464243064 NULL 0.000 0.000 0.000 0.000 GA 43.00 TC 43.20 NC 42.90 EFP7GF -10.3286 0.71881 ECMLC 0.62814 -6.60060 2.86264 1600000 457860 0.002621 ECMGC 0.39242 -17.11946 -2.89968 1600000 106036 0.003772 ECMLI 0.57480 -5.21201 4.59996 1600000 337723 0.003553 ECMGI 0.42525 -11.02089 1.32043 1600000 76088 0.005257 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 97 125 -7.175 -8.420 -0.065 -4.874 IL 1 1 2 1 4 1 26 98 127 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 28 99 127 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 98 - A - - MR 3 2 3 5 5 1 28 97 125 -7.371 -0.032 -7.186 -7.398 -8.290 1.480 -1.965 -0.740 -1.490 D 4 2 3 5 5 0 21 95 124 -5.352 -0.707 -2.978 -4.409 -2.404 IR 5 5 3 5 5 1 26 97 126 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 97 G C - - MP 6 5 3 10 6 2 28 96 124 -9.245 -9.184 -0.019 -7.960 -8.240 -8.635 -4.759 -3.106 -4.825 0.244 -5.661 -4.812 -0.887 -5.222 -4.441 3.602 -4.774 0.116 -1.171 -4.485 -2.920 -3.711 ML 7 5 3 10 6 1 23 94 123 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 22 94 123 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 18 91 120 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 25 95 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 25 95 124 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 96 U A - - MP 12 11 6 16 6 2 26 94 122 -9.245 -9.184 -0.019 -7.960 -8.240 -8.635 -4.985 -4.822 -4.730 -1.069 -3.518 -5.219 0.819 -4.263 -4.729 -0.910 -5.062 -2.696 3.605 -5.098 -1.176 -3.456 ML 13 11 6 16 6 1 22 92 121 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 21 92 121 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 17 90 118 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 24 93 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 24 93 122 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 95 G C - - MP 18 17 6 22 6 2 25 92 120 -9.245 -9.184 -0.019 -7.960 -8.240 -8.635 -5.354 -3.391 -5.537 -0.224 -6.087 -4.923 -1.299 -5.804 -4.704 3.756 -5.002 -1.121 -1.670 -4.862 -3.374 -4.405 ML 19 17 6 22 6 1 21 91 119 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 20 90 119 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 17 88 117 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 22 92 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 22 91 120 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 94 C G - - MP 24 23 6 28 4 2 23 90 118 -7.283 -7.490 -0.042 -5.904 -5.246 -5.210 -4.813 -1.393 -3.396 -5.132 3.719 -4.276 -4.894 -1.233 -5.071 -3.175 0.037 -5.266 -1.128 -3.713 ML 25 23 6 28 4 1 20 89 118 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 4 1 18 89 117 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 27 23 6 28 4 0 17 88 116 -4.568 -4.250 -2.265 -0.520 IL 28 28 5 28 4 1 22 91 119 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 29 29 6 29 3 1 21 90 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 5 - a - - - ML 30 29 6 32 3 1 21 88 116 -8.278 -0.017 -6.932 0.894 -0.684 -0.689 -0.153 D 31 29 6 32 3 0 16 86 115 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 20 89 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - a - - - ML 33 32 3 35 3 1 20 87 115 -8.278 -0.017 -6.932 0.877 -1.684 0.476 -1.114 D 34 32 3 35 3 0 15 85 114 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 20 88 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 7 - U - - - ML 36 35 3 38 3 1 19 86 114 -8.278 -0.017 -6.932 -2.081 -1.976 -2.839 1.753 D 37 35 3 38 3 0 15 84 113 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 19 87 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 8 - G - - - ML 39 38 3 41 3 1 18 85 113 -8.278 -0.017 -6.932 -2.233 -3.542 1.836 -2.927 D 40 38 3 41 3 0 14 83 112 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 18 86 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 9 - A - - - ML 42 41 3 44 3 1 18 84 112 -8.278 -0.017 -6.932 1.826 -3.007 -2.577 -2.614 D 43 41 3 44 3 0 13 82 111 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 17 85 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - U - - - ML 45 44 3 47 3 1 17 83 111 -8.278 -0.017 -6.932 -2.081 -1.976 -2.839 1.753 D 46 44 3 47 3 0 12 81 110 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 16 84 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - G - - - ML 48 47 3 50 3 1 16 82 110 -8.278 -0.061 -4.712 -2.233 -3.542 1.836 -2.927 D 49 47 3 50 3 0 12 80 109 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 16 83 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - c - - - ML 51 50 3 53 3 1 15 81 109 -8.234 -0.017 -6.888 -0.618 0.671 -1.001 0.329 D 52 50 3 53 3 0 11 79 107 -6.601 -2.114 -0.398 IL 53 53 3 53 3 1 15 82 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - A - - - ML 54 53 3 56 3 1 14 80 108 -8.234 -0.017 -6.888 1.612 -1.992 -1.874 -1.254 D 55 53 3 56 3 0 10 78 107 -6.601 -1.038 -0.993 IL 56 56 3 56 3 1 14 81 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - U - - - ML 57 56 3 59 3 1 13 79 107 -8.278 -0.017 -6.932 -0.223 -1.020 -1.136 1.135 D 58 56 3 59 3 0 9 77 105 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 13 80 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - U - - - ML 60 59 3 62 3 1 13 78 106 -5.293 -0.094 -4.739 -1.072 -1.419 -2.062 1.541 D 61 59 3 62 3 0 9 76 104 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 13 79 108 -1.264 -0.899 -4.396 0.000 0.000 0.000 0.000 [ MATL 17 ] 19 - U - - - ML 63 62 3 65 3 1 12 77 105 -8.235 -0.109 -3.844 -0.936 -0.701 -1.431 1.317 D 64 62 3 65 3 0 8 75 103 -6.592 -2.105 -0.401 IL 65 65 3 65 3 1 12 78 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 20 - U - - - ML 66 65 3 68 3 1 12 76 104 -8.144 -0.018 -6.798 0.045 -0.967 -1.322 1.040 D 67 65 3 68 3 0 7 74 102 -7.188 -2.701 -0.253 IL 68 68 3 68 3 1 12 77 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 21 - A - - - ML 69 68 3 71 3 1 11 75 103 -8.144 -0.061 -4.715 1.010 -0.823 -1.156 -0.040 D 70 68 3 71 3 0 7 73 102 -7.188 -0.603 -1.579 IL 71 71 3 71 3 1 10 76 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 22 - u - - - ML 72 71 3 74 3 1 11 74 102 -2.865 -0.227 -6.893 0.135 -0.577 -0.268 0.487 D 73 71 3 74 3 0 5 71 99 -6.558 -1.085 -0.949 IL 74 74 3 74 3 1 10 76 104 -0.993 -1.091 -5.161 0.000 0.000 0.000 0.000 [ MATL 21 ] 26 - U - - - ML 75 74 3 77 3 1 10 71 99 -3.154 -0.185 -6.932 -1.395 -0.861 -2.142 1.507 D 76 74 3 77 3 0 4 68 95 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 9 73 101 -0.963 -1.127 -5.101 0.000 0.000 0.000 0.000 [ MATL 22 ] 30 - C - - - ML 78 77 3 80 3 1 9 68 93 -8.278 -0.017 -6.932 -2.510 1.779 -3.338 -1.773 D 79 77 3 80 3 0 3 66 91 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 8 69 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 31 - A - - - ML 81 80 3 83 3 1 9 67 92 -8.278 -0.017 -6.932 1.661 -2.315 -1.446 -1.893 D 82 80 3 83 3 0 2 65 90 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 7 68 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 32 - A - - - ML 84 83 3 86 3 1 8 66 91 -8.278 -0.017 -6.932 1.826 -3.007 -2.577 -2.614 D 85 83 3 86 3 0 2 64 89 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 7 67 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 33 - C - - - ML 87 86 3 89 3 1 7 65 90 -8.278 -0.017 -6.932 -2.510 1.779 -3.338 -1.773 D 88 86 3 89 3 0 1 63 88 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 6 66 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 34 - A - - - ML 90 89 3 92 3 1 7 64 89 -8.278 -0.017 -6.932 1.464 -1.484 -1.113 -1.246 D 91 89 3 92 3 0 0 62 87 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 5 65 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 35 - C - - - ML 93 92 3 95 3 1 6 63 88 -8.278 -0.017 -6.932 -2.510 1.779 -3.338 -1.773 D 94 92 3 95 3 0 0 61 86 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 4 64 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 36 - A - - - ML 96 95 3 98 3 1 6 62 87 -8.278 -0.017 -6.932 1.603 -1.568 -1.836 -1.533 D 97 95 3 98 3 0 0 60 85 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 4 63 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 37 - U - - - ML 99 98 3 101 3 1 5 61 86 -8.278 -0.017 -6.932 -2.081 -1.976 -2.839 1.753 D 100 98 3 101 3 0 0 59 84 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 3 62 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 38 - C - - - ML 102 101 3 104 3 1 4 60 85 -8.278 -0.017 -6.932 -2.510 1.779 -3.338 -1.773 D 103 101 3 104 3 0 0 58 83 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 3 61 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 39 - A - - - ML 105 104 3 107 3 1 4 59 84 -8.278 -0.017 -6.932 1.826 -3.007 -2.577 -2.614 D 106 104 3 107 3 0 0 57 82 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 2 60 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 40 - U - - - ML 108 107 3 110 3 1 3 58 83 -8.278 -0.017 -6.932 -2.081 -1.976 -2.839 1.753 D 109 107 3 110 3 0 0 56 81 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 2 59 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 41 - U - - - ML 111 110 3 113 3 1 3 57 82 -8.278 -0.017 -6.932 -2.081 -1.976 -2.839 1.753 D 112 110 3 113 3 0 0 55 80 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 58 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 42 - C - - - ML 114 113 3 116 3 1 3 56 81 -8.278 -0.017 -6.932 -2.510 1.779 -3.338 -1.773 D 115 113 3 116 3 0 0 54 79 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 57 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 43 - U - - - ML 117 116 3 119 3 1 2 55 80 -8.278 -0.017 -6.932 -1.537 -1.141 -2.281 1.583 D 118 116 3 119 3 0 0 53 78 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 56 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 44 - G - - - ML 120 119 3 122 3 1 2 54 79 -8.278 -0.017 -6.932 -1.474 -2.216 1.667 -2.003 D 121 119 3 122 3 0 0 52 77 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 55 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 45 - A - - - ML 123 122 3 125 3 1 2 53 78 -8.278 -0.017 -6.932 1.826 -3.007 -2.577 -2.614 D 124 122 3 125 3 0 0 51 76 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 54 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 46 - A - - - ML 126 125 3 128 3 1 1 52 77 -5.190 -0.052 -6.932 1.427 -1.592 -1.596 -0.625 D 127 125 3 128 3 0 0 50 75 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 54 79 -1.252 -0.907 -4.416 0.000 0.000 0.000 0.000 [ MATL 39 ] 50 - A - - - ML 129 128 3 131 3 1 1 51 76 -4.476 -0.079 -6.932 1.111 -1.300 -0.149 -0.909 D 130 128 3 131 3 0 0 48 73 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 52 77 -1.250 -0.900 -4.518 0.000 0.000 0.000 0.000 [ MATL 40 ] 54 - a - - - ML 132 131 3 134 3 1 1 49 74 -1.857 -0.482 -6.932 0.636 -0.627 -0.165 -0.141 D 133 131 3 134 3 0 0 45 69 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 50 75 -1.061 -1.000 -5.589 0.000 0.000 0.000 0.000 [ MATL 41 ] 59 - u - - - ML 135 134 3 137 3 1 1 44 65 -8.278 -0.017 -6.932 0.138 -0.088 -0.362 0.240 D 136 134 3 137 3 0 0 43 64 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 46 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 60 - A - - - ML 138 137 3 140 3 1 1 43 64 -8.278 -0.017 -6.932 1.454 -1.661 -1.227 -0.951 D 139 137 3 140 3 0 0 41 63 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 45 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 61 - g - - - ML 141 140 3 143 3 1 1 42 63 -8.278 -0.017 -6.932 0.004 -0.431 0.332 -0.005 D 142 140 3 143 3 0 0 40 62 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 44 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 62 - a - - - ML 144 143 3 146 3 1 1 41 62 -5.253 -0.051 -6.932 0.817 -0.693 -0.256 -0.353 D 145 143 3 146 3 0 0 39 60 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 43 64 -1.382 -0.820 -4.322 0.000 0.000 0.000 0.000 [ MATL 45 ] 65 - U - - - ML 147 146 3 149 3 1 1 40 61 -5.195 -0.052 -6.932 -0.766 -0.824 -0.872 1.202 D 148 146 3 149 3 0 0 38 59 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 41 63 -1.380 -0.821 -4.330 0.000 0.000 0.000 0.000 [ MATL 46 ] 68 - G - - - ML 150 149 3 152 3 1 1 38 59 -8.278 -0.017 -6.932 -0.253 -2.155 1.381 -1.588 D 151 149 3 152 3 0 0 37 58 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 40 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 69 - U - - - ML 153 152 3 155 3 1 1 37 58 -8.278 -0.017 -6.932 -2.081 -1.976 -2.839 1.753 D 154 152 3 155 3 0 0 36 57 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 39 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 70 - G - - - ML 156 155 3 158 3 1 1 36 57 -8.278 -0.107 -3.879 -2.233 -3.542 1.836 -2.927 D 157 155 3 158 3 0 0 35 56 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 38 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 71 - U - - - ML 159 158 3 161 3 1 1 35 56 -4.834 -0.065 -6.843 -0.556 -1.025 -0.904 1.198 D 160 158 3 161 3 0 0 33 54 -6.929 -2.442 -0.308 IL 161 161 3 161 3 1 1 37 57 -1.561 -0.716 -4.261 0.000 0.000 0.000 0.000 [ MATL 50 ] 73 - a - - - ML 162 161 3 164 3 1 1 34 55 -8.189 -0.018 -6.843 0.405 -1.088 0.373 -0.135 D 163 161 3 164 3 0 0 33 54 -6.929 -0.758 -1.320 IL 164 164 3 164 3 1 1 36 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 74 - G - - - ML 165 164 3 167 3 1 1 33 54 -8.278 -0.017 -6.932 -1.725 -2.832 1.722 -1.956 D 166 164 3 167 3 0 0 32 53 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 35 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 75 - A - - - ML 168 167 3 170 3 1 1 32 53 -8.278 -0.017 -6.932 1.508 -1.782 -1.288 -1.133 D 169 167 3 170 3 0 0 31 52 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 34 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 76 - a - - - ML 171 170 3 173 3 1 1 31 52 -8.278 -0.017 -6.932 0.908 -0.658 -0.288 -0.576 D 172 170 3 173 3 0 0 30 50 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 33 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 77 - A - - - ML 174 173 3 176 3 1 1 30 51 -8.278 -0.017 -6.932 1.273 -1.419 -0.826 -0.633 D 175 173 3 176 3 0 0 28 49 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 32 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 78 - a - - - ML 177 176 3 179 3 1 1 29 50 -8.278 -0.017 -6.932 0.997 -0.764 -0.752 -0.283 D 178 176 3 179 3 0 0 27 48 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 31 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 79 - u - - - ML 180 179 3 182 3 1 1 28 49 -2.550 -0.285 -6.932 -0.243 0.413 -1.145 0.456 D 181 179 3 182 3 0 0 24 45 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 29 50 -1.275 -0.844 -5.069 0.000 0.000 0.000 0.000 [ MATL 57 ] 84 - U - - - ML 183 182 3 185 3 1 1 23 42 -8.278 -0.017 -6.932 -0.684 -0.281 -1.599 1.154 D 184 182 3 185 3 0 0 22 41 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 85 - a - - - ML 186 185 3 188 3 1 1 22 41 -8.278 -0.017 -6.932 0.907 -1.063 -0.687 0.036 D 187 185 3 188 3 0 0 21 40 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 86 - A - - - ML 189 188 3 191 3 1 1 21 40 -8.278 -0.017 -6.932 1.572 -2.112 -1.060 -1.663 D 190 188 3 191 3 0 0 20 39 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 87 - U - - - ML 192 191 3 194 3 1 1 20 38 -8.278 -0.017 -6.932 -0.914 -1.229 -1.485 1.425 D 193 191 3 194 3 0 0 19 38 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 88 - g - - - ML 195 194 3 197 3 1 1 19 37 -8.278 -0.017 -6.932 -0.065 -1.186 0.975 -0.648 D 196 194 3 197 3 0 0 18 37 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 89 - A - - - ML 198 197 3 200 3 1 1 17 36 -8.278 -0.017 -6.932 1.826 -3.007 -2.577 -2.614 D 199 197 3 200 3 0 0 17 36 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 90 - C - - - ML 201 200 3 203 3 1 1 16 35 -8.278 -0.017 -6.932 -2.510 1.779 -3.338 -1.773 D 202 200 3 203 3 0 0 16 34 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 91 - U - - - ML 204 203 3 206 3 1 1 15 33 -8.278 -0.017 -6.932 -2.081 -1.976 -2.839 1.753 D 205 203 3 206 3 0 0 15 33 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 92 - G - - - ML 207 206 3 209 3 1 1 13 31 -8.278 -0.017 -6.932 -2.233 -3.542 1.836 -2.927 D 208 206 3 209 3 0 0 13 32 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 93 - A - - - ML 210 209 3 212 2 1 1 1 1 * 0.000 1.826 -3.007 -2.577 -2.614 D 211 209 3 212 2 0 0 0 0 * 0.000 IL 212 212 3 212 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 67 ] - - - - - - E 213 212 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD63 ACC RF00154 DESC Small nucleolar RNA SNORD63 LENG 70 MAXL 153 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 14:21:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00154/CM NSEQ 23 EFFN 3.051880 CKSUM 2464243064 STATS LOCAL MSV -8.3189 0.71881 STATS LOCAL VITERBI -9.1248 0.71881 STATS LOCAL FORWARD -3.4488 0.71881 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.16161 1.61824 1.53201 1.29948 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 0.00000 * 1 2.46846 3.26806 0.18158 3.14066 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 2 3.34046 2.19056 3.13262 0.21181 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 3 2.78855 3.55148 0.12868 3.48838 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 4 3.52105 0.17318 3.33519 2.36620 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 5 0.75744 1.86761 1.87319 1.50053 5 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 6 0.76825 2.59808 1.04517 2.20613 6 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 7 2.90957 2.82357 3.43733 0.15787 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 8 3.01678 3.93409 0.10374 3.50605 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 9 0.11053 3.55434 3.24869 3.29106 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 10 2.90957 2.82357 3.43733 0.15787 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 11 3.01678 3.93409 0.10374 3.50605 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.06578 4.16634 3.03330 1.46634 0.26236 1.09861 0.40547 12 1.84068 0.90455 2.09321 1.16067 12 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03259 4.13315 4.13315 1.46634 0.26236 1.63024 0.21801 13 0.25561 2.81498 2.73682 2.29388 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03259 4.13315 4.13315 1.46634 0.26236 0.49720 0.93709 14 1.55175 2.12139 2.19267 0.58584 14 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 15 2.16870 2.41516 2.87053 0.30158 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.09122 3.22404 3.04926 1.21472 0.35210 1.09861 0.40547 16 2.07419 1.88987 2.40720 0.45700 19 U - - _ 1.38629 1.38629 1.38629 1.38629 0.10415 4.13394 2.49025 1.46634 0.26236 1.62056 0.22038 17 1.35947 2.08225 2.33053 0.65141 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03494 4.06473 4.06473 1.46634 0.26236 2.22247 0.11467 18 0.67414 1.96984 2.21183 1.42120 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06861 4.06473 3.01304 1.46634 0.26236 0.24422 1.52933 19 1.29434 1.79318 1.56905 1.04626 22 u - - _ 1.38629 1.38629 1.38629 1.38629 0.19626 1.81874 4.13703 1.03949 0.43639 0.52986 0.88840 20 2.40740 2.00400 2.92597 0.32636 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.16239 2.00709 4.16634 1.13037 0.38996 1.09861 0.40547 21 3.22658 0.13862 3.79752 2.69823 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 22 0.22264 3.04861 2.41677 2.76524 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 23 0.11053 3.55434 3.24869 3.29106 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 24 3.22658 0.13862 3.79752 2.69823 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 25 0.35835 2.44001 2.17893 2.29415 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 26 3.22658 0.13862 3.79752 2.69823 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 27 0.26186 2.49961 2.70984 2.50450 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 28 2.90957 2.82357 3.43733 0.15787 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 29 3.22658 0.13862 3.79752 2.69823 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 30 0.11053 3.55434 3.24869 3.29106 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 31 2.90957 2.82357 3.43733 0.15787 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 32 2.90957 2.82357 3.43733 0.15787 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 33 3.22658 0.13862 3.79752 2.69823 42 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 34 2.50978 2.20730 3.02642 0.27414 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 35 2.46814 2.96199 0.21663 2.84188 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 36 0.11053 3.55434 3.24869 3.29106 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 37 0.38306 2.52717 2.53420 1.83873 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05905 3.17402 4.16634 1.20842 0.35477 1.09861 0.40547 38 0.60432 2.31186 1.48717 2.05208 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.07954 2.79777 4.16634 1.02707 0.44325 1.09861 0.40547 39 0.94066 1.82579 1.49828 1.49155 54 a - - _ 1.38629 1.38629 1.38629 1.38629 0.39793 1.16225 4.16634 0.81401 0.58533 1.09861 0.40547 40 1.29234 1.44307 1.63635 1.22254 59 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 41 0.36581 2.57237 2.26105 2.07331 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 42 1.39086 1.68571 1.14417 1.39700 61 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 43 0.81221 1.87202 1.56394 1.64505 62 a - - _ 1.38629 1.38629 1.38629 1.38629 0.05771 3.20476 4.16634 0.96767 0.47798 1.09861 0.40547 44 1.94987 1.97792 2.00128 0.53753 65 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05896 3.17618 4.16634 0.95970 0.48290 1.09861 0.40547 45 1.57614 2.93189 0.41357 2.54278 68 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 46 2.90957 2.82357 3.43733 0.15787 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 47 3.01678 3.93409 0.10374 3.50605 70 G - - _ 1.38629 1.38629 1.38629 1.38629 0.10109 4.16634 2.51775 1.46634 0.26236 1.09861 0.40547 48 1.79554 2.12618 2.02633 0.53982 71 U - - _ 1.38629 1.38629 1.38629 1.38629 0.07026 2.97082 4.09899 0.55589 0.85229 1.97403 0.14954 49 1.10496 2.16023 1.11659 1.48685 73 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03374 4.09899 4.09899 1.46634 0.26236 0.32544 1.28089 50 2.64803 3.41987 0.17998 2.79354 74 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 51 0.32849 2.65935 2.30482 2.20527 75 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 52 0.74685 1.84655 1.58645 1.80965 76 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 53 0.49113 2.39922 1.97178 1.84473 77 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 54 0.68441 1.92481 1.91897 1.59478 78 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 55 1.56568 1.08727 2.19743 1.07052 79 u - - _ 1.38629 1.38629 1.38629 1.38629 0.24027 1.61910 4.16634 0.68473 0.70164 1.09861 0.40547 56 1.88642 1.58396 2.52930 0.57357 84 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 57 0.74823 2.14377 1.87126 1.36393 85 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 58 0.28387 2.90304 2.13721 2.59967 86 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 59 2.05754 2.27777 2.44760 0.38094 87 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 60 1.44411 2.22852 0.69153 1.86083 88 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 61 0.11053 3.55434 3.24869 3.29106 89 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 62 3.22658 0.13862 3.79752 2.69823 90 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 63 2.90957 2.82357 3.43733 0.15787 91 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 64 3.01678 3.93409 0.10374 3.50605 92 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 65 0.11053 3.55434 3.24869 3.29106 93 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 66 2.64702 3.50367 0.14882 3.28801 94 G - - > 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 67 3.68161 0.15316 3.39760 2.48447 95 C - - > 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 68 0.23918 3.32908 2.02799 3.09448 96 A - - > 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 69 3.37423 0.25448 3.10525 1.92673 97 C - - > 1.38629 1.38629 1.38629 1.38629 0.03151 4.16634 4.16634 1.46634 0.26236 1.09861 0.40547 70 0.34759 2.79809 1.90690 2.47518 98 A - - : 1.38629 1.38629 1.38629 1.38629 0.01588 4.15071 * 1.46634 0.26236 0.00000 * //