INFERNAL1/a [1.1.4 | Dec 2020] NAME HDV_ribozyme ACC RF00094 DESC Hepatitis delta virus ribozyme STATES 282 NODES 75 CLEN 91 W 115 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:15:23 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 33 EFFN 1.575073 CKSUM 457633856 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 55.00 NC 49.00 EFP7GF -6.0273 0.71882 ECMLC 0.50831 -11.05162 0.27569 1600000 379973 0.003158 ECMGC 0.34669 -14.66263 -2.18786 1600000 30223 0.013235 ECMLI 0.40947 -10.31077 2.60481 1600000 237676 0.005049 ECMGI 0.35961 -9.56292 2.41885 1600000 29738 0.013451 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 115 139 -6.795 -7.002 -0.080 -4.764 IL 1 1 2 1 4 11 42 118 143 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 11 42 117 142 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 11 41 115 140 -7.805 -0.023 -6.459 0.069 -0.727 -0.270 0.601 D 4 2 3 5 3 7 38 113 138 -6.316 -1.414 -0.708 IL 5 5 3 5 3 10 41 116 141 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - u - - - ML 6 5 3 8 3 11 40 114 139 -8.223 -0.020 -6.541 -0.599 0.479 -1.366 0.640 D 7 5 3 8 3 7 37 112 137 -5.620 -0.734 -1.403 IL 8 8 3 8 3 10 40 114 139 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 115 - u - - MR 9 8 3 11 3 10 39 113 138 -8.223 -0.020 -6.541 0.315 -0.219 -0.688 0.351 D 10 8 3 11 3 6 35 111 136 -6.390 -1.568 -0.620 IR 11 11 3 11 3 9 39 113 138 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 114 - c - - MR 12 11 3 14 3 10 38 112 137 -8.223 -0.020 -6.541 -0.102 0.370 -0.188 -0.155 D 13 11 3 14 3 5 34 110 135 -6.390 -1.568 -0.620 IR 14 14 3 14 3 9 38 112 137 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 113 - a - - MR 15 14 3 17 3 9 38 111 136 -8.223 -0.020 -6.541 0.471 0.207 -0.800 -0.176 D 16 14 3 17 3 5 34 109 134 -6.390 -1.568 -0.620 IR 17 17 3 17 3 8 37 111 136 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 112 - C - - MR 18 17 3 20 3 9 37 110 135 -8.223 -0.020 -6.541 -1.404 1.519 -2.214 -0.887 D 19 17 3 20 3 4 33 108 133 -6.390 -1.568 -0.620 IR 20 20 3 20 3 8 36 110 135 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 111 - a - - MR 21 20 3 23 3 8 36 109 134 -8.223 -0.020 -6.541 0.368 0.225 -0.644 -0.150 D 22 20 3 23 3 4 32 107 132 -6.390 -1.568 -0.620 IR 23 23 3 23 3 7 36 109 134 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 110 - G - - MR 24 23 3 26 3 7 35 108 133 -8.223 -0.020 -6.541 -0.811 -1.755 1.385 -0.938 D 25 23 3 26 3 4 31 106 131 -6.390 -1.568 -0.620 IR 26 26 3 26 3 7 35 108 133 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 109 - a - - MR 27 26 3 29 3 6 34 107 132 -8.223 -0.020 -6.541 0.598 -1.076 0.311 -0.376 D 28 26 3 29 3 3 31 105 130 -6.390 -1.568 -0.620 IR 29 29 3 29 3 6 34 107 132 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 108 - G - - MR 30 29 3 32 3 6 33 106 131 -8.223 -0.020 -6.541 -1.278 -2.448 1.643 -1.833 D 31 29 3 32 3 3 30 104 129 -6.390 -1.568 -0.620 IR 32 32 3 32 3 5 33 106 131 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 107 - a - - MR 33 32 3 35 3 5 32 105 130 -8.223 -0.342 -2.266 0.600 -0.796 -0.975 0.485 D 34 32 3 35 3 3 29 103 128 -6.390 -1.568 -0.620 IR 35 35 3 35 3 6 33 106 130 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 106 - G - - MR 36 35 3 38 3 6 32 104 129 -7.906 -0.026 -6.224 -0.577 -1.605 1.322 -0.996 D 37 35 3 38 3 2 29 102 126 -7.712 -2.889 -0.217 IR 38 38 3 38 3 5 32 105 129 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 105 - G - - MR 39 38 3 41 3 6 31 103 128 -7.906 -0.026 -6.224 -0.577 -1.605 1.322 -0.996 D 40 38 3 41 3 2 29 101 126 -7.712 -2.889 -0.217 IR 41 41 3 41 3 5 31 104 128 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 104 - G - - MR 42 41 3 44 3 5 30 102 127 -7.906 -0.026 -6.224 -0.577 -1.605 1.322 -0.996 D 43 41 3 44 3 2 28 101 125 -7.712 -0.444 -1.941 IR 44 44 3 44 3 4 30 103 127 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 103 - A - - MR 45 44 3 47 3 5 29 101 126 -8.223 -0.020 -6.541 1.650 -2.088 -1.749 -1.604 D 46 44 3 47 3 1 27 99 124 -6.390 -1.568 -0.620 IR 47 47 3 47 3 4 29 102 126 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 102 - A - - MR 48 47 3 50 3 4 29 100 125 -8.223 -0.020 -6.541 1.556 -1.846 -1.352 -1.356 D 49 47 3 50 3 1 26 98 123 -6.390 -1.568 -0.620 IR 50 50 3 50 3 4 29 101 125 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 101 - u - - MR 51 50 3 53 3 3 28 99 124 -8.223 -0.020 -6.541 0.135 -0.767 -0.029 0.416 D 52 50 3 53 3 1 25 97 122 -6.390 -1.568 -0.620 IR 53 53 3 53 3 3 28 100 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 100 - C - - MR 54 53 3 56 3 2 27 98 123 -8.223 -0.020 -6.541 -1.404 1.519 -2.214 -0.887 D 55 53 3 56 3 1 25 97 121 -6.390 -1.568 -0.620 IR 56 56 3 56 3 2 27 99 123 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 99 - G - - MR 57 56 3 59 2 1 26 97 122 -8.185 -0.005 -1.278 -2.448 1.643 -1.833 D 58 56 3 59 2 0 25 96 121 -4.432 -0.068 IR 59 59 3 59 2 1 26 98 123 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 20 ] - - - - - - B 60 59 3 61 180 0 25 96 121 [ BEGL 21 ] - - - - - - S 61 60 1 62 4 0 1 55 76 -0.047 -6.758 -6.166 -6.806 [ MATP 22 ] 3 48 g u - - MP 62 61 1 66 6 2 4 55 76 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -3.409 -2.264 -3.560 1.244 -4.170 -4.797 0.190 -3.649 -3.298 1.854 -3.805 2.738 -0.130 -4.033 -1.748 -2.320 ML 63 61 1 66 6 1 1 54 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 64 61 1 66 6 1 1 54 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 65 61 1 66 6 0 0 51 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 66 66 5 66 6 1 1 55 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 67 67 6 67 5 1 1 55 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 4 47 G C - - MP 68 67 6 72 6 2 4 53 74 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -4.469 -2.965 -4.547 0.378 -4.848 -4.584 -0.279 -4.767 -4.144 3.565 -4.501 -0.655 -0.673 -4.287 -2.303 -3.428 ML 69 67 6 72 6 1 1 52 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 70 67 6 72 6 1 1 52 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 71 67 6 72 6 0 0 49 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 72 72 5 72 6 1 1 53 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 73 73 6 73 5 1 1 53 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 5 46 g c - - MP 74 73 6 78 6 2 4 51 72 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -3.323 -2.759 -3.313 0.851 -2.884 -3.999 2.104 -3.323 -3.361 2.430 -3.794 -0.565 1.011 -3.419 -0.520 -2.234 ML 75 73 6 78 6 1 1 50 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 76 73 6 78 6 1 1 50 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 77 73 6 78 6 0 0 47 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 78 78 5 78 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 79 79 6 79 5 1 1 51 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 6 45 c g - - MP 80 79 6 84 6 2 4 49 70 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -3.509 -3.421 -3.406 0.286 -2.406 -3.996 2.578 -3.098 -3.423 0.577 -3.821 -1.407 2.295 -3.655 -0.089 -2.303 ML 81 79 6 84 6 1 1 48 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 82 79 6 84 6 1 1 48 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 83 79 6 84 6 0 0 45 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 84 84 5 84 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 85 85 6 85 5 1 1 49 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 7 44 g c - - MP 86 85 6 90 6 2 4 47 68 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -2.860 -2.529 -2.929 0.973 -2.610 -3.685 2.128 -3.031 -2.984 2.135 -2.539 -0.494 1.196 -3.033 -0.352 -1.929 ML 87 85 6 90 6 1 1 46 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 88 85 6 90 6 1 1 46 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 89 85 6 90 6 0 0 44 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 90 90 5 90 6 1 1 47 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 91 91 6 91 5 1 1 47 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 8 43 G C - - MP 92 91 6 96 6 2 3 45 66 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -4.469 -2.965 -4.547 0.378 -4.848 -4.584 -0.279 -4.767 -4.144 3.565 -4.501 -0.655 -0.673 -4.287 -2.303 -3.428 ML 93 91 6 96 6 1 1 45 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 94 91 6 96 6 1 1 44 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 95 91 6 96 6 0 0 43 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 96 96 5 96 6 1 1 45 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 97 97 6 97 5 1 1 45 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 9 42 g c - - MP 98 97 6 102 4 2 2 43 64 -6.795 -7.002 -0.059 -5.416 -3.323 -2.759 -3.313 0.851 -2.884 -3.999 2.104 -3.323 -3.361 2.430 -3.794 -0.565 1.011 -3.419 -0.520 -2.234 ML 99 97 6 102 4 1 1 44 64 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 100 97 6 102 4 1 1 43 63 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 101 97 6 102 4 0 0 42 62 -4.568 -4.250 -2.265 -0.520 IL 102 102 5 102 4 1 1 45 65 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 103 103 6 103 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 10 - a - - - ML 104 103 6 106 3 1 1 41 61 -7.823 -0.023 -6.477 0.525 0.287 -1.034 -0.231 D 105 103 6 106 3 0 0 40 60 -6.174 -1.687 -0.566 IL 106 106 3 106 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 11 - a - - - ML 107 106 3 109 3 1 1 40 60 -7.823 -0.023 -6.477 0.600 -0.796 -0.975 0.485 D 108 106 3 109 3 0 0 39 59 -6.174 -1.687 -0.566 IL 109 109 3 109 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 12 - u - - - ML 110 109 3 112 3 1 1 39 59 -7.823 -0.023 -6.477 -0.299 -0.844 0.195 0.571 D 111 109 3 112 3 0 0 38 58 -6.174 -1.687 -0.566 IL 112 112 3 112 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 13 - G - - - ML 113 112 3 115 3 1 1 38 58 -7.823 -0.023 -6.477 -1.278 -2.448 1.643 -1.833 D 114 112 3 115 3 0 0 37 57 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 14 - u - - - ML 116 115 3 118 3 1 1 37 57 -7.823 -0.045 -5.243 -0.219 -0.576 0.270 0.339 D 117 115 3 118 3 0 0 35 56 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 15 - C - - - ML 119 118 3 121 3 1 1 36 56 -7.801 -0.351 -2.240 -0.720 1.140 -1.194 -0.411 D 120 118 3 121 3 0 0 35 55 -6.347 -1.860 -0.490 IL 121 121 3 121 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 16 - A - - - ML 122 121 3 124 3 1 1 35 55 -7.478 -0.029 -6.132 1.404 -1.435 -1.158 -0.901 D 123 121 3 124 3 0 0 34 54 -7.649 -0.411 -2.041 IL 124 124 3 124 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 17 - u - - - ML 125 124 3 127 3 1 1 34 54 -7.823 -0.023 -6.477 -0.595 0.333 -1.354 0.755 D 126 124 3 127 3 0 0 32 52 -6.174 -1.687 -0.566 IL 127 127 3 127 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 18 - C - - - ML 128 127 3 130 3 1 1 33 53 -7.823 -0.023 -6.477 -1.404 1.519 -2.214 -0.887 D 129 127 3 130 3 0 0 31 51 -6.174 -1.687 -0.566 IL 130 130 3 130 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 19 - u - - - ML 131 130 3 133 3 1 1 32 52 -7.823 -0.373 -2.161 0.462 -0.771 -0.991 0.617 D 132 130 3 133 3 0 0 30 50 -6.174 -1.687 -0.566 IL 133 133 3 133 3 1 1 34 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 20 - C - - - ML 134 133 3 136 3 1 1 31 51 -7.478 -0.029 -6.132 -0.672 1.136 -1.432 -0.315 D 135 133 3 136 3 0 0 29 49 -7.649 -3.162 -0.179 IL 136 136 3 136 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 21 - C - - - ML 137 136 3 139 5 1 1 30 50 -4.401 -0.110 -6.495 -6.707 -7.598 -0.672 1.136 -1.432 -0.315 D 138 136 3 139 5 0 0 28 48 -5.961 -0.346 -5.222 -3.597 -3.510 IL 139 139 3 139 5 1 1 32 52 -1.337 -0.904 -4.648 -6.480 -5.754 0.000 0.000 0.000 0.000 [ MATP 41 ] 28 41 g c - - MP 140 139 3 144 6 2 2 27 46 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -3.395 -2.434 -3.438 2.072 -3.772 -4.302 0.599 -3.685 -3.422 2.746 -3.891 -0.066 0.279 -3.585 -1.356 -2.342 ML 141 139 3 144 6 1 1 26 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 142 139 3 144 6 1 1 26 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 143 139 3 144 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 144 144 5 144 6 1 1 27 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 145 145 6 145 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 29 40 C G - - MP 146 145 6 150 6 2 2 25 44 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -4.267 -4.146 -4.004 -0.406 -2.787 -4.452 3.453 -3.568 -4.045 -0.121 -4.335 -2.091 0.754 -4.354 -0.488 -2.895 ML 147 145 6 150 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 148 145 6 150 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 149 145 6 150 6 0 0 22 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 150 150 5 150 6 1 1 25 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 151 151 6 151 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 30 39 C G - - MP 152 151 6 156 4 2 2 23 42 -6.795 -2.069 -0.456 -5.416 -4.267 -4.146 -4.004 -0.406 -2.787 -4.452 3.453 -3.568 -4.045 -0.121 -4.335 -2.091 0.754 -4.354 -0.488 -2.895 ML 153 151 6 156 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 154 151 6 156 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 155 151 6 156 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 156 156 5 156 4 1 1 24 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 157 157 6 157 3 1 1 22 41 -1.975 -0.501 -4.675 0.000 0.000 0.000 0.000 [ MATL 44 ] 31 - U - - - ML 158 157 6 160 3 1 1 20 39 -7.823 -0.023 -6.477 -1.229 -1.272 -1.948 1.536 D 159 157 6 160 3 0 0 19 38 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 32 - C - - - ML 161 160 3 163 3 1 1 19 38 -7.823 -0.023 -6.477 -0.913 1.343 -1.826 -0.623 D 162 160 3 163 3 0 0 18 37 -6.174 -1.687 -0.566 IL 163 163 3 163 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 33 - C - - - ML 164 163 3 166 3 1 1 18 36 -7.823 -0.023 -6.477 -1.404 1.519 -2.214 -0.887 D 165 163 3 166 3 0 0 17 36 -6.174 -1.687 -0.566 IL 166 166 3 166 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 34 - u - - - ML 167 166 3 169 3 1 1 16 35 -7.823 -0.023 -6.477 -0.638 -0.013 -1.382 0.987 D 168 166 3 169 3 0 0 16 34 -6.174 -1.687 -0.566 IL 169 169 3 169 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 35 - C - - - ML 170 169 3 172 3 1 1 15 33 -7.823 -0.023 -6.477 -1.247 1.436 -2.056 -0.659 D 171 169 3 172 3 0 0 15 33 -6.174 -1.687 -0.566 IL 172 172 3 172 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 36 - G - - - ML 173 172 3 175 3 1 1 13 32 -7.823 -0.023 -6.477 -0.556 -1.457 1.300 -1.021 D 174 172 3 175 3 0 0 13 32 -6.174 -1.687 -0.566 IL 175 175 3 175 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 37 - c - - - ML 176 175 3 178 2 1 1 1 1 * 0.000 -0.534 0.867 -1.083 0.020 D 177 175 3 178 2 0 0 0 0 * 0.000 IL 178 178 3 178 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 51 ] - - - - - - E 179 178 3 -1 0 0 0 0 0 [ BEGR 52 ] - - - - - - S 180 60 1 181 3 0 1 56 81 -7.823 -0.023 -6.477 IL 181 181 2 181 3 1 1 58 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 49 - G - - - ML 182 181 2 184 3 1 2 56 81 -7.823 -0.023 -6.477 -1.278 -2.448 1.643 -1.833 D 183 181 2 184 3 0 0 54 79 -6.174 -1.687 -0.566 IL 184 184 3 184 3 1 1 57 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 50 - G - - - ML 185 184 3 187 3 1 2 55 80 -7.823 -0.023 -6.477 -1.278 -2.448 1.643 -1.833 D 186 184 3 187 3 0 0 53 78 -6.174 -1.687 -0.566 IL 187 187 3 187 3 1 1 56 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 51 - G - - - ML 188 187 3 190 5 1 1 54 79 -2.389 -0.344 -6.786 -6.998 -7.890 -1.278 -2.448 1.643 -1.833 D 189 187 3 190 5 0 0 51 76 -4.959 -0.803 -4.221 -2.596 -2.508 IL 190 190 3 190 5 1 1 55 80 -1.094 -1.032 -5.359 -7.191 -6.465 0.000 0.000 0.000 0.000 [ MATP 56 ] 55 98 C G - - MP 191 190 3 195 6 2 2 51 73 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -4.267 -4.146 -4.004 -0.406 -2.787 -4.452 3.453 -3.568 -4.045 -0.121 -4.335 -2.091 0.754 -4.354 -0.488 -2.895 ML 192 190 3 195 6 1 1 49 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 193 190 3 195 6 1 1 49 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 194 190 3 195 6 0 0 46 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 195 195 5 195 6 1 1 50 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 196 196 6 196 5 1 1 50 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 56 97 a u - - MP 197 196 6 201 6 2 2 49 71 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -3.354 -2.463 -3.422 2.845 -3.718 -4.581 0.572 -3.560 -3.340 1.913 -3.869 -0.023 0.228 -3.785 -1.366 -2.287 ML 198 196 6 201 6 1 1 47 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 199 196 6 201 6 1 1 47 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 200 196 6 201 6 0 0 44 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 201 201 5 201 6 1 1 48 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 202 202 6 202 5 1 1 48 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 57 96 u a - - MP 203 202 6 207 6 2 2 47 69 -9.051 -8.990 -0.145 -7.767 -8.047 -3.584 -3.304 -3.061 -3.301 0.925 -2.594 -4.041 1.720 -3.150 -3.298 0.936 -3.760 -0.946 2.682 -3.528 -0.289 -2.208 ML 204 202 6 207 6 1 1 45 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 205 202 6 207 6 1 1 45 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 206 202 6 207 6 0 0 43 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 207 207 5 207 6 1 1 46 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 208 208 6 208 5 1 1 46 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 58 95 u a - - MP 209 208 6 213 6 2 2 45 67 -8.930 -3.448 -0.162 -7.646 -7.925 -8.321 -3.260 -3.086 -3.173 0.550 -2.284 -3.780 2.168 -2.936 -3.205 0.979 -3.606 -1.056 2.411 -3.408 0.017 -2.097 ML 210 208 6 213 6 1 1 43 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 211 208 6 213 6 1 1 43 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 212 208 6 213 6 0 0 42 65 -10.257 -8.955 -0.727 -5.434 -5.452 -1.527 IL 213 213 5 213 6 1 1 44 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 214 214 6 214 5 1 1 44 66 -2.966 -0.318 -6.477 -4.644 -5.750 0.000 0.000 0.000 0.000 [ MATP 60 ] 59 93 C G - - MP 215 214 6 219 6 2 2 43 65 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -4.267 -4.146 -4.004 -0.406 -2.787 -4.452 3.453 -3.568 -4.045 -0.121 -4.335 -2.091 0.754 -4.354 -0.488 -2.895 ML 216 214 6 219 6 1 1 41 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 217 214 6 219 6 1 1 41 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 218 214 6 219 6 0 0 38 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 219 219 5 219 6 1 1 42 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 220 220 6 220 5 1 1 42 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 60 92 c g - - MP 221 220 6 225 6 2 2 41 63 -9.051 -4.827 -0.072 -7.767 -8.047 -8.442 -3.240 -3.207 -3.255 0.389 -0.980 -3.957 2.968 -3.118 -3.272 0.848 -3.733 -1.282 1.214 -3.456 -0.241 -2.215 ML 222 220 6 225 6 1 1 39 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 223 220 6 225 6 1 1 39 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 224 220 6 225 6 0 0 36 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 225 225 5 225 6 1 1 40 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 226 226 6 226 5 1 1 40 62 -2.225 -0.503 -6.270 -4.438 -5.544 0.000 0.000 0.000 0.000 [ MATP 62 ] 61 89 G C - - MP 227 226 6 231 6 2 2 38 61 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -3.821 -2.711 -3.810 0.789 -3.923 -4.281 0.559 -4.041 -3.774 3.246 -4.154 -0.412 0.449 -3.755 -1.445 -2.732 ML 228 226 6 231 6 1 1 37 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 229 226 6 231 6 1 1 37 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 230 226 6 231 6 0 0 35 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 231 231 5 231 6 1 1 38 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 232 232 6 232 5 1 1 38 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 63 ] 62 88 a u - - MP 233 232 6 237 4 2 2 36 59 -6.795 -2.205 -0.910 -2.047 -2.644 -1.799 -2.756 2.500 -2.846 -3.669 0.991 -3.020 -2.811 1.619 -3.337 -0.214 0.731 -2.934 -0.767 -0.211 ML 234 232 6 237 4 1 1 35 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 235 232 6 237 4 1 1 35 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 236 232 6 237 4 0 0 34 56 -4.568 -4.250 -2.265 -0.520 IL 237 237 5 237 4 1 1 37 59 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 238 238 6 238 3 1 1 36 59 -1.186 -0.916 -5.030 0.000 0.000 0.000 0.000 [ MATL 64 ] 63 - A - - - ML 239 238 6 241 5 1 1 31 50 -4.405 -0.109 -6.511 -6.724 -7.615 1.309 -1.316 -0.896 -0.779 D 240 238 6 241 5 0 0 30 49 -5.922 -0.357 -5.184 -3.559 -3.471 IL 241 241 3 241 5 1 1 31 51 -2.519 -0.453 -4.198 -6.031 -5.304 0.000 0.000 0.000 0.000 [ MATP 65 ] 65 83 G C - - MP 242 241 3 246 6 2 2 30 49 -9.051 -6.999 -0.031 -7.767 -8.047 -8.442 -4.329 -2.892 -4.397 0.583 -4.759 -4.555 -0.195 -4.644 -4.067 3.517 -4.438 -0.571 -0.562 -4.194 -2.212 -3.281 ML 243 241 3 246 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 244 241 3 246 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 245 241 3 246 6 0 0 26 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 246 246 5 246 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 247 247 6 247 5 1 1 29 49 -2.456 -0.477 -5.967 -4.135 -5.241 0.000 0.000 0.000 0.000 [ MATP 66 ] 66 81 G C - - MP 248 247 6 252 6 2 2 28 47 -9.051 -8.990 -0.022 -7.767 -8.047 -8.442 -3.817 -1.968 -3.846 0.841 -4.366 -4.301 0.105 -4.224 -3.783 3.317 -4.169 0.157 -0.182 -3.747 -1.856 -2.790 ML 249 247 6 252 6 1 1 27 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 250 247 6 252 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 251 247 6 252 6 0 0 25 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 252 252 5 252 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 253 253 6 253 5 1 1 27 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 67 ] 67 80 g c - - MP 254 253 6 258 4 2 2 26 45 -6.795 -7.002 -0.059 -5.416 -3.326 -2.385 -3.370 2.031 -3.750 -4.245 0.602 -3.647 -3.378 2.710 -3.847 0.225 0.306 -3.509 -1.340 -2.288 ML 255 253 6 258 4 1 1 26 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 256 253 6 258 4 1 1 26 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 257 253 6 258 4 0 0 25 44 -4.568 -4.250 -2.265 -0.520 IL 258 258 5 258 4 1 1 28 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 259 259 6 259 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 68 - G - - - ML 260 259 6 262 3 1 1 23 42 -8.223 -0.160 -3.295 -0.671 -2.006 1.456 -1.401 D 261 259 6 262 3 0 0 22 41 -5.620 -0.734 -1.403 IL 262 262 3 262 3 1 1 24 43 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 69 ] - 79 - g - - MR 263 262 3 265 5 1 1 23 42 -3.372 -0.184 -6.659 -6.871 -7.762 -0.164 -0.231 0.428 -0.137 D 264 262 3 265 5 0 0 21 40 -5.826 -0.472 -3.452 -4.883 -2.877 IR 265 265 3 265 5 1 1 23 42 -2.428 -0.450 -6.243 -4.411 -5.517 0.000 0.000 0.000 0.000 [ MATP 70 ] 69 76 g c - - MP 266 265 3 270 4 2 2 21 40 -2.936 -3.135 -0.450 -5.416 -2.877 -1.921 -2.244 1.774 -3.182 -3.708 0.940 -3.288 -3.071 2.582 -3.525 0.086 0.669 -2.971 -0.911 -1.956 ML 267 265 3 270 4 1 1 20 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 268 265 3 270 4 1 1 19 38 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 269 265 3 270 4 0 0 18 37 -4.568 -4.250 -2.265 -0.520 IL 270 270 5 270 4 1 1 21 40 -2.250 -1.137 -1.681 -5.419 0.000 0.000 0.000 0.000 IR 271 271 6 271 3 1 1 20 39 -1.411 -0.758 -4.924 0.000 0.000 0.000 0.000 [ MATL 71 ] 71 - c - - - ML 272 271 6 274 3 1 1 15 33 -7.823 -0.023 -6.477 0.167 0.412 -0.647 -0.139 D 273 271 6 274 3 0 0 15 33 -6.174 -1.687 -0.566 IL 274 274 3 274 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 72 - c - - - ML 275 274 3 277 3 1 1 13 32 -7.823 -0.023 -6.477 -0.154 0.679 -1.065 0.032 D 276 274 3 277 3 0 0 13 32 -6.174 -1.687 -0.566 IL 277 277 3 277 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 73 - G - - - ML 278 277 3 280 2 1 1 1 1 * 0.000 -0.098 -1.306 1.061 -0.799 D 279 277 3 280 2 0 0 0 0 * 0.000 IL 280 280 3 280 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 74 ] - - - - - - E 281 280 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME HDV_ribozyme ACC RF00094 DESC Hepatitis delta virus ribozyme LENG 91 MAXL 185 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:15:24 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 33 EFFN 2.646606 CKSUM 457633856 STATS LOCAL MSV -9.1644 0.71882 STATS LOCAL VITERBI -10.5316 0.71882 STATS LOCAL FORWARD -3.0531 0.71882 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.66643 1.23401 1.13196 1.62173 1.38629 1.38629 1.38629 1.38629 0.05403 4.00425 3.37081 1.46634 0.26236 0.00000 * 1 1.36554 1.99887 1.55627 0.92043 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.03778 3.98800 3.98800 1.46634 0.26236 0.72344 0.66374 2 2.02753 0.94176 2.58847 0.90816 2 u - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 3 1.96335 3.07058 0.27727 2.89375 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 4 2.68099 3.38841 0.14863 3.32834 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 5 2.13184 1.18474 0.88714 1.80956 5 g - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 6 2.60012 0.87766 2.35360 0.87959 6 c - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 7 1.97863 1.14779 1.06291 1.61468 7 g - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 8 2.67614 3.38230 0.14961 3.31993 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 9 2.13022 1.18510 0.88759 1.80896 9 g - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 10 0.97409 1.08360 2.29064 1.69888 10 a - - - 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 11 0.91862 2.06957 2.20290 1.01003 11 a - - - 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 12 1.73558 2.12175 1.17253 0.93065 12 u - - - 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 13 2.84521 3.74213 0.12567 3.31688 13 G - - - 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 14 1.65406 1.84476 1.09498 1.15165 14 g - - - 1.38629 1.38629 1.38629 1.38629 0.05796 4.00425 3.26830 1.46634 0.26236 1.09861 0.40547 15 2.28227 0.38960 2.48443 1.98597 15 C - - - 1.38629 1.38629 1.38629 1.38629 0.35692 3.98422 1.26739 1.46634 0.26236 1.40792 0.28057 16 0.26908 2.74280 2.51653 2.39925 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.05181 3.67911 3.67911 1.46634 0.26236 0.11628 2.20936 17 2.02116 1.06355 2.57370 0.80740 17 u - - - 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 18 3.01881 0.16975 3.59459 2.52834 18 C - - - 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 19 1.03204 2.05526 2.21622 0.89982 19 u - - - 1.38629 1.38629 1.38629 1.38629 0.37695 4.00425 1.21802 1.46634 0.26236 1.09861 0.40547 20 2.25301 0.37450 2.80877 1.91727 20 C - - - 1.38629 1.38629 1.38629 1.38629 0.05181 3.67911 3.67911 1.46634 0.26236 2.90251 0.05645 21 2.25301 0.37450 2.80877 1.91727 21 C - - - 1.38629 1.38629 1.38629 1.38629 0.12215 2.41087 3.67911 1.73748 0.19354 0.11628 2.20936 22 1.11898 2.53055 0.68704 2.40011 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 23 3.31028 0.21046 3.11838 2.21591 29 C - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 24 3.31948 0.20957 3.12301 2.21760 30 C - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 25 2.74424 2.68555 3.26672 0.18707 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 26 2.44052 0.27350 3.16133 2.20905 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 27 3.01881 0.16975 3.59459 2.52834 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 28 2.06846 1.36799 2.60346 0.60700 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 29 2.81050 0.22457 3.39083 2.23226 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 30 2.04082 2.63768 0.33900 2.45265 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 31 1.99419 0.62350 2.31199 1.47514 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.37695 1.21802 4.00425 0.11905 2.18716 1.09861 0.40547 32 2.48299 3.27668 0.18333 3.07341 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 33 2.47336 3.26302 0.18582 3.05745 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 34 2.59449 0.78586 2.33112 0.98778 41 c - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 35 2.05286 0.96242 1.08896 1.87667 42 c - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 36 3.51252 0.17801 3.21887 2.37252 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 37 1.84763 1.18193 1.01769 1.74712 44 g - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 38 0.99157 2.51988 0.78891 2.36238 45 g - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 39 2.05271 0.96247 1.08900 1.87660 46 c - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 40 3.50530 0.17858 3.21558 2.37115 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 41 3.07429 1.73514 2.85122 0.32902 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 42 2.84521 3.74213 0.12567 3.31688 49 G - - - 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 43 2.84521 3.74213 0.12567 3.31688 50 G - - - 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 44 2.84521 3.74213 0.12567 3.31688 51 G - - - 1.38629 1.38629 1.38629 1.38629 0.37695 1.21802 4.00425 1.11533 0.39721 1.09861 0.40547 45 3.28338 0.21312 3.10472 2.21089 55 C - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 46 0.51970 2.69606 1.34378 2.56428 56 A - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 47 2.02136 1.63749 2.06808 0.60399 57 U - - < 1.38629 1.38629 1.38629 1.38629 0.36813 4.00425 1.23878 1.46634 0.26236 1.09861 0.40547 48 2.33136 1.20475 2.02747 0.75205 58 u - - < 1.38629 1.38629 1.38629 1.38629 0.05137 3.68748 3.68748 1.46634 0.26236 0.11858 2.19090 49 3.31075 0.21042 3.11862 2.21599 59 C - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 50 2.42069 0.54191 1.99531 1.64232 60 C - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 51 2.21924 2.59800 0.33449 2.29085 61 G - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 52 0.73793 2.19365 1.51948 1.65254 62 a - - < 1.38629 1.38629 1.38629 1.38629 0.35599 4.00425 1.26840 1.46634 0.26236 1.09861 0.40547 53 0.34888 2.57273 2.20597 2.22512 63 A - - - 1.38629 1.38629 1.38629 1.38629 0.12038 2.42285 3.69902 0.48757 0.95222 0.12193 2.16464 54 2.43851 3.25433 0.18438 3.15858 65 G - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 55 2.11549 2.87639 0.27670 2.73631 66 G - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 56 1.15811 2.49965 0.67496 2.35778 67 G - - < 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 57 2.14698 3.24035 0.24128 2.84064 68 G - - - 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 58 1.30796 2.18403 0.72230 2.02946 69 g - - < 1.38629 1.38629 1.38629 1.38629 0.20197 1.80397 4.00425 0.20849 1.67030 1.09861 0.40547 59 1.29313 0.98983 1.88827 1.59644 71 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 60 1.59201 0.77754 2.29249 1.44420 72 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 61 1.56943 2.49275 0.51161 2.21070 73 G - - _ 1.38629 1.38629 1.38629 1.38629 0.37187 1.22991 4.00425 0.55075 0.85924 1.09861 0.40547 62 2.27203 0.82396 1.94459 1.15468 76 c - - > 1.38629 1.38629 1.38629 1.38629 0.33807 1.96412 1.92023 0.38531 1.14019 1.09861 0.40547 63 1.63054 1.53047 0.95205 1.60052 79 g - - - 1.38629 1.38629 1.38629 1.38629 0.04275 3.86690 3.86690 1.46634 0.26236 0.22223 1.61311 64 2.57646 0.80933 2.30488 0.97014 80 c - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 65 2.92366 0.35484 2.67839 1.73554 81 C - - > 1.38629 1.38629 1.38629 1.38629 0.05785 3.27094 4.00425 0.78348 0.61030 1.09861 0.40547 66 3.25324 0.22543 3.04435 2.15801 83 C - - > 1.38629 1.38629 1.38629 1.38629 0.34002 1.30931 4.00425 0.78434 0.60958 1.09861 0.40547 67 2.24756 1.67201 1.99624 0.56102 88 U - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 68 2.45895 0.38277 2.41901 1.94146 89 C - - > 1.38629 1.38629 1.38629 1.38629 0.16098 2.03675 4.00425 0.53041 0.88761 1.09861 0.40547 69 1.69584 2.13088 0.53256 2.20074 92 G - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 70 2.48014 3.27263 0.18407 3.06867 93 G - - > 1.38629 1.38629 1.38629 1.38629 0.88081 1.21802 1.23878 0.11905 2.18716 1.09861 0.40547 71 0.86786 2.18991 1.06295 2.09729 95 a - - > 1.38629 1.38629 1.38629 1.38629 0.05137 3.68748 3.68748 1.46634 0.26236 0.11858 2.19090 72 0.67706 2.26232 1.47359 1.84086 96 A - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 73 2.78901 1.54435 2.50726 0.44071 97 U - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 74 2.49389 3.29221 0.18055 3.09162 98 G - - > 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 75 2.84521 3.74213 0.12567 3.31688 99 G - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 76 3.01881 0.16975 3.59459 2.52834 100 C - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 77 1.31376 2.02347 1.35791 1.07353 101 u - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 78 0.19624 3.09077 2.62871 2.80437 102 A - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 79 0.13290 3.38159 3.09191 3.10025 103 A - - : 1.38629 1.38629 1.38629 1.38629 0.37695 4.00425 1.21802 1.46634 0.26236 1.09861 0.40547 80 2.17415 2.96733 0.27965 2.54072 104 G - - : 1.38629 1.38629 1.38629 1.38629 0.05181 3.67911 3.67911 1.46634 0.26236 2.90251 0.05645 81 2.17415 2.96733 0.27965 2.54072 105 G - - : 1.38629 1.38629 1.38629 1.38629 0.05181 3.67911 3.67911 1.46634 0.26236 2.90251 0.05645 82 2.17415 2.96733 0.27965 2.54072 106 G - - : 1.38629 1.38629 1.38629 1.38629 0.05181 3.67911 3.67911 1.46634 0.26236 0.11628 2.20936 83 0.91862 2.06957 2.20290 1.01003 107 a - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 84 2.84521 3.74213 0.12567 3.31688 108 G - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 85 0.93731 2.29092 1.08918 1.76810 109 a - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 86 2.32176 3.01148 0.27968 2.33661 110 G - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 87 1.11324 1.14302 1.88958 1.60188 111 a - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 88 3.01881 0.16975 3.59459 2.52834 112 C - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 89 1.02169 1.15581 2.04391 1.63122 113 a - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 90 1.55526 1.01794 1.47404 1.61682 114 c - - : 1.38629 1.38629 1.38629 1.38629 0.03716 4.00425 4.00425 1.46634 0.26236 1.09861 0.40547 91 1.15095 1.52330 1.91186 1.14612 115 u - - : 1.38629 1.38629 1.38629 1.38629 0.01875 3.98585 * 1.46634 0.26236 0.00000 * //