INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD26 ACC RF00087 DESC Small nucleolar RNA SNORD26 STATES 232 NODES 74 CLEN 76 W 94 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 5 21:36:22 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00087/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 17 EFFN 2.544189 CKSUM 3033497217 NULL 0.000 0.000 0.000 0.000 GA 44.00 TC 44.20 NC 43.80 EFP7GF -9.8004 0.71869 ECMLC 0.67403 -5.60896 2.84959 1600000 359101 0.003342 ECMGC 0.38821 -17.84794 -4.07785 1600000 83882 0.004769 ECMLI 0.66521 -3.51161 4.62676 1600000 269356 0.004455 ECMGI 0.42722 -11.84277 -0.00413 1600000 62889 0.006360 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 94 114 -7.079 -8.324 -0.069 -4.778 IL 1 1 2 1 4 1 30 95 116 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 32 95 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 79 - C - - MR 3 2 3 5 5 2 32 94 114 -7.284 -0.034 -7.100 -7.312 -8.204 -1.719 1.562 -2.563 -0.798 D 4 2 3 5 5 0 25 92 113 -5.352 -0.707 -2.978 -4.409 -2.404 IR 5 5 3 5 5 1 30 94 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 78 C G - - MP 6 5 3 10 6 3 32 93 113 -9.201 -9.140 -0.020 -7.916 -8.196 -8.591 -5.029 -4.975 -4.635 -1.170 -3.256 -4.983 3.675 -4.114 -4.704 -0.988 -4.910 -2.932 0.204 -5.065 -0.978 -3.529 ML 7 5 3 10 6 1 27 91 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 26 91 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 22 89 109 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 29 92 113 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 29 92 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 77 u a - - MP 12 11 6 16 6 2 31 91 111 -9.201 -9.140 -0.020 -7.916 -8.196 -8.591 -3.340 -3.298 -3.362 0.294 -2.625 -4.078 1.807 -3.225 -3.372 0.519 -3.846 -1.363 2.854 -3.561 -0.357 -0.818 ML 13 11 6 16 6 1 26 89 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 25 89 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 22 87 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 28 90 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 28 90 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 76 a u - - MP 18 17 6 22 6 2 29 89 109 -9.201 -9.140 -0.020 -7.916 -8.196 -8.591 -3.240 -0.730 -3.340 2.859 -3.818 -4.444 0.184 -3.613 -3.316 1.569 -3.846 0.907 -0.032 -3.627 -1.606 -2.295 ML 19 17 6 22 6 1 25 88 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 24 87 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 21 86 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 27 88 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 26 88 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 75 C G - - MP 24 23 6 28 4 2 27 87 107 -7.180 -7.387 -0.045 -5.801 -5.029 -4.975 -4.635 -1.170 -3.256 -4.983 3.675 -4.114 -4.704 -0.988 -4.910 -2.932 0.204 -5.065 -0.978 -3.529 ML 25 23 6 28 4 1 24 87 108 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 4 1 22 86 107 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 27 23 6 28 4 0 21 85 106 -4.568 -4.250 -2.265 -0.520 IL 28 28 5 28 4 1 26 88 109 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 29 29 6 29 3 1 25 87 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 5 - G - - - ML 30 29 6 32 3 1 25 84 105 -8.181 -0.018 -6.835 0.178 -1.807 1.108 -1.227 D 31 29 6 32 3 0 20 83 104 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 25 86 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - G - - - ML 33 32 3 35 3 1 25 83 104 -8.181 -0.018 -6.835 -0.806 -1.024 1.304 -1.101 D 34 32 3 35 3 0 19 82 103 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 24 85 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 7 - g - - - ML 36 35 3 38 3 1 24 82 103 -8.181 -0.018 -6.835 -0.288 -1.185 0.792 0.013 D 37 35 3 38 3 0 19 81 101 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 23 84 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 8 - G - - - ML 39 38 3 41 3 1 23 81 102 -8.181 -0.018 -6.835 -2.037 -3.322 1.809 -2.709 D 40 38 3 41 3 0 18 80 100 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 22 83 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 9 - A - - - ML 42 41 3 44 3 1 22 80 101 -8.181 -0.018 -6.835 1.798 -2.812 -2.400 -2.399 D 43 41 3 44 3 0 17 79 99 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 21 82 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - U - - - ML 45 44 3 47 3 1 21 79 100 -8.181 -0.018 -6.835 -1.895 -1.821 -2.647 1.717 D 46 44 3 47 3 0 16 78 98 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 21 81 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - G - - - ML 48 47 3 50 3 1 20 78 99 -8.181 -0.018 -6.835 -2.037 -3.322 1.809 -2.709 D 49 47 3 50 3 0 16 77 97 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 20 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - A - - - ML 51 50 3 53 3 1 19 77 98 -8.181 -0.018 -6.835 1.798 -2.812 -2.400 -2.399 D 52 50 3 53 3 0 15 76 96 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 19 79 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - U - - - ML 54 53 3 56 3 1 18 76 97 -8.181 -0.018 -6.835 -1.030 -1.206 -1.347 1.424 D 55 53 3 56 3 0 14 75 95 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 18 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - u - - - ML 57 56 3 59 3 1 18 75 96 -8.181 -0.018 -6.835 0.497 -0.947 -1.181 0.704 D 58 56 3 59 3 0 14 74 94 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 17 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - u - - - ML 60 59 3 62 3 1 17 74 95 -8.181 -0.018 -6.835 -0.143 -0.085 -0.907 0.694 D 61 59 3 62 3 0 13 73 93 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 17 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - u - - - ML 63 62 3 65 3 1 16 73 94 -8.181 -0.018 -6.835 0.105 0.022 -0.917 0.464 D 64 62 3 65 3 0 12 72 92 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - a - - - ML 66 65 3 68 3 1 15 72 92 -8.181 -0.018 -6.835 0.746 -0.565 -0.593 -0.024 D 67 65 3 68 3 0 12 71 91 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 15 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - A - - - ML 69 68 3 71 3 1 14 71 91 -8.181 -0.461 -1.890 1.109 -0.749 -0.697 -0.663 D 70 68 3 71 3 0 11 70 90 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 16 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - g - - - ML 72 71 3 74 3 1 16 70 91 -7.745 -0.024 -6.399 0.299 -0.708 0.453 -0.343 D 73 71 3 74 3 0 11 68 89 -8.102 -1.559 -0.606 IL 74 74 3 74 3 1 15 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - A - - - ML 75 74 3 77 3 1 15 69 90 -7.913 -0.021 -6.567 1.205 -1.018 -0.772 -0.699 D 76 74 3 77 3 0 10 67 87 -7.672 -3.185 -0.176 IL 77 77 3 77 3 1 15 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 21 - a - - - ML 78 77 3 80 3 1 14 68 89 -7.913 -0.021 -6.567 0.966 -0.716 -0.737 -0.255 D 79 77 3 80 3 0 10 66 87 -7.672 -2.006 -0.422 IL 80 80 3 80 3 1 14 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - c - - - ML 81 80 3 83 3 1 14 67 87 -7.975 -0.020 -6.629 -0.747 0.703 -1.540 0.519 D 82 80 3 83 3 0 9 66 86 -7.456 -0.481 -1.848 IL 83 83 3 83 3 1 12 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 23 - U - - - ML 84 83 3 86 3 1 13 66 86 -8.181 -0.018 -6.835 -1.895 -1.821 -2.647 1.717 D 85 83 3 86 3 0 7 65 85 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 12 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 24 - G - - - ML 87 86 3 89 3 1 12 65 85 -8.181 -0.018 -6.835 -2.037 -3.322 1.809 -2.709 D 88 86 3 89 3 0 6 64 84 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 11 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 25 - A - - - ML 90 89 3 92 3 1 12 64 84 -8.181 -0.018 -6.835 1.798 -2.812 -2.400 -2.399 D 91 89 3 92 3 0 5 62 83 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 10 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 26 - A - - - ML 93 92 3 95 3 1 11 63 83 -8.181 -0.018 -6.835 1.617 -2.150 -1.321 -1.706 D 94 92 3 95 3 0 5 61 82 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 27 - C - - - ML 96 95 3 98 3 1 10 62 82 -8.181 -0.018 -6.835 -2.274 1.741 -3.105 -1.582 D 97 95 3 98 3 0 4 60 81 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 9 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 28 - U - - - ML 99 98 3 101 3 1 10 61 81 -8.181 -0.018 -6.835 -1.895 -1.821 -2.647 1.717 D 100 98 3 101 3 0 4 59 80 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 8 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 29 - C - - - ML 102 101 3 104 3 1 9 60 80 -8.181 -0.018 -6.835 -2.274 1.741 -3.105 -1.582 D 103 101 3 104 3 0 3 58 79 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 7 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 30 - U - - - ML 105 104 3 107 3 1 8 59 79 -8.181 -0.018 -6.835 -1.895 -1.821 -2.647 1.717 D 106 104 3 107 3 0 3 57 78 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 7 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - C - - - ML 108 107 3 110 3 1 8 58 78 -8.181 -0.018 -6.835 -2.274 1.741 -3.105 -1.582 D 109 107 3 110 3 0 2 56 77 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 6 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 32 - U - - - ML 111 110 3 113 3 1 7 57 77 -8.181 -0.018 -6.835 -1.895 -1.821 -2.647 1.717 D 112 110 3 113 3 0 1 55 76 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 6 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - C - - - ML 114 113 3 116 3 1 7 56 76 -8.181 -0.018 -6.835 -2.274 1.741 -3.105 -1.582 D 115 113 3 116 3 0 1 54 75 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 5 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 34 - U - - - ML 117 116 3 119 3 1 6 55 75 -8.181 -0.018 -6.835 -1.895 -1.821 -2.647 1.717 D 118 116 3 119 3 0 0 53 73 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 5 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 35 - U - - - ML 120 119 3 122 3 1 6 54 74 -8.181 -0.018 -6.835 -1.895 -1.821 -2.647 1.717 D 121 119 3 122 3 0 0 52 72 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 4 55 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 36 - u - - - ML 123 122 3 125 3 1 5 53 73 -8.181 -0.018 -6.835 -0.148 -0.915 -0.717 0.970 D 124 122 3 125 3 0 0 51 71 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 3 54 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 37 - C - - - ML 126 125 3 128 3 1 5 52 72 -8.181 -0.018 -6.835 -2.274 1.741 -3.105 -1.582 D 127 125 3 128 3 0 0 50 70 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 3 53 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 38 - U - - - ML 129 128 3 131 3 1 4 51 71 -8.181 -0.018 -6.835 -1.895 -1.821 -2.647 1.717 D 130 128 3 131 3 0 0 49 69 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 2 52 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 39 - G - - - ML 132 131 3 134 3 1 4 49 70 -8.181 -0.018 -6.835 -2.037 -3.322 1.809 -2.709 D 133 131 3 134 3 0 0 48 68 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 2 51 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 40 - A - - - ML 135 134 3 137 3 1 3 48 69 -8.181 -0.018 -6.835 1.798 -2.812 -2.400 -2.399 D 136 134 3 137 3 0 0 47 67 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 2 50 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 41 - u - - - ML 138 137 3 140 3 1 3 47 67 -8.181 -0.018 -6.835 -0.327 -0.939 -0.440 0.959 D 139 137 3 140 3 0 0 46 66 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 49 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 42 - G - - - ML 141 140 3 143 3 1 2 46 66 -8.181 -0.018 -6.835 -0.806 -1.024 1.304 -1.101 D 142 140 3 143 3 0 0 45 65 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 48 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 43 - g - - - ML 144 143 3 146 3 1 2 45 65 -8.181 -0.018 -6.835 -0.269 -0.853 0.703 -0.016 D 145 143 3 146 3 0 0 44 64 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 44 - u - - - ML 147 146 3 149 3 1 2 44 64 -8.181 -0.018 -6.835 0.371 -0.694 -0.396 0.410 D 148 146 3 149 3 0 0 43 63 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 45 - U - - - ML 150 149 3 152 3 1 1 43 63 -8.181 -0.018 -6.835 -0.693 -0.233 -1.182 1.063 D 151 149 3 152 3 0 0 42 62 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 46 - U - - - ML 153 152 3 155 3 1 1 42 62 -8.181 -0.018 -6.835 -1.028 -0.224 -1.788 1.241 D 154 152 3 155 3 0 0 41 61 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 47 - A - - - ML 156 155 3 158 3 1 1 41 61 -8.181 -0.018 -6.835 1.493 -1.915 -0.861 -1.438 D 157 155 3 158 3 0 0 40 60 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 48 - G - - - ML 159 158 3 161 3 1 1 40 60 -8.181 -0.018 -6.835 -1.190 -2.713 1.669 -2.131 D 160 158 3 161 3 0 0 39 59 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 49 - U - - - ML 162 161 3 164 3 1 1 39 59 -8.181 -0.018 -6.835 -1.895 -1.821 -2.647 1.717 D 163 161 3 164 3 0 0 38 58 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 50 - G - - - ML 165 164 3 167 3 1 1 38 58 -8.181 -0.018 -6.835 -2.037 -3.322 1.809 -2.709 D 166 164 3 167 3 0 0 37 57 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 51 - G - - - ML 168 167 3 170 3 1 1 37 57 -8.181 -0.018 -6.835 -2.037 -3.322 1.809 -2.709 D 169 167 3 170 3 0 0 36 56 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 52 - A - - - ML 171 170 3 173 3 1 1 36 56 -8.181 -0.018 -6.835 1.798 -2.812 -2.400 -2.399 D 172 170 3 173 3 0 0 35 54 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 53 - G - - - ML 174 173 3 176 3 1 1 35 55 -8.181 -0.018 -6.835 -2.037 -3.322 1.809 -2.709 D 175 173 3 176 3 0 0 33 53 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 54 - A - - - ML 177 176 3 179 3 1 1 34 54 -8.181 -0.018 -6.835 1.798 -2.812 -2.400 -2.399 D 178 176 3 179 3 0 0 32 52 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 55 - A - - - ML 180 179 3 182 3 1 1 33 53 -8.181 -0.018 -6.835 1.356 -0.834 -1.450 -0.961 D 181 179 3 182 3 0 0 31 51 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 56 - A - - - ML 183 182 3 185 3 1 1 32 52 -8.181 -0.192 -3.044 1.618 -2.152 -1.326 -1.709 D 184 182 3 185 3 0 0 30 50 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 34 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 57 - a - - - ML 186 185 3 188 3 1 1 31 51 -8.009 -0.020 -6.663 0.967 -1.056 -0.510 -0.214 D 187 185 3 188 3 0 0 30 49 -7.317 -0.540 -1.709 IL 188 188 3 188 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 58 - c - - - ML 189 188 3 191 3 1 1 30 49 -8.181 -0.018 -6.835 -0.055 0.194 -0.196 0.030 D 190 188 3 191 3 0 0 28 48 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 32 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 59 - a - - - ML 192 191 3 194 3 1 1 29 48 -8.181 -0.018 -6.835 0.613 -0.395 -0.415 -0.059 D 193 191 3 194 3 0 0 27 47 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 60 - a - - - ML 195 194 3 197 3 1 1 28 47 -8.181 -0.018 -6.835 0.234 -0.037 -0.491 0.186 D 196 194 3 197 3 0 0 26 46 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 61 - a - - - ML 198 197 3 200 3 1 1 27 46 -8.181 -0.018 -6.835 0.777 -0.997 -1.163 0.421 D 199 197 3 200 3 0 0 25 45 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 62 - A - - - ML 201 200 3 203 3 1 1 25 45 -8.181 -0.018 -6.835 1.025 -1.090 -0.920 -0.048 D 202 200 3 203 3 0 0 24 44 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 63 - a - - - ML 204 203 3 206 3 1 1 24 44 -4.454 -0.081 -6.835 0.983 -0.828 -0.858 -0.138 D 205 203 3 206 3 0 0 22 42 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 27 46 -1.349 -0.833 -4.438 0.000 0.000 0.000 0.000 [ MATL 65 ] 66 - A - - - ML 207 206 3 209 3 1 1 22 40 -8.181 -0.018 -6.835 1.209 -1.271 -1.331 -0.189 D 208 206 3 209 3 0 0 21 40 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 25 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 67 - u - - - ML 210 209 3 212 3 1 1 20 39 -8.181 -0.222 -2.843 0.299 -0.878 -0.235 0.460 D 211 209 3 212 3 0 0 20 38 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 24 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 68 - a - - - ML 213 212 3 215 3 1 1 19 38 -1.706 -0.549 -6.633 0.715 -0.224 -1.012 0.010 D 214 212 3 215 3 0 0 17 36 -7.439 -1.282 -0.778 IL 215 215 3 215 3 1 1 19 38 -2.216 -0.412 -4.916 0.000 0.000 0.000 0.000 [ MATL 68 ] 70 - U - - - ML 216 215 3 218 3 1 1 17 36 -8.080 -0.019 -6.734 -1.703 -1.662 -2.447 1.675 D 217 215 3 218 3 0 0 17 35 -6.962 -0.736 -1.353 IL 218 218 3 218 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 71 - C - - - ML 219 218 3 221 3 1 1 16 35 -8.181 -0.018 -6.835 -2.274 1.741 -3.105 -1.582 D 220 218 3 221 3 0 0 16 34 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 72 - U - - - ML 222 221 3 224 3 1 1 15 33 -8.181 -0.018 -6.835 -1.895 -1.821 -2.647 1.717 D 223 221 3 224 3 0 0 15 33 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 73 - G - - - ML 225 224 3 227 3 1 1 13 31 -8.181 -0.018 -6.835 -2.037 -3.322 1.809 -2.709 D 226 224 3 227 3 0 0 13 32 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 74 - A - - - ML 228 227 3 230 2 1 1 1 1 * 0.000 1.798 -2.812 -2.400 -2.399 D 229 227 3 230 2 0 0 0 0 * 0.000 IL 230 230 3 230 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 73 ] - - - - - - E 231 230 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD26 ACC RF00087 DESC Small nucleolar RNA SNORD26 LENG 76 MAXL 160 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 5 21:36:22 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00087/CM NSEQ 17 EFFN 2.751709 CKSUM 3033497217 STATS LOCAL MSV -9.3801 0.71869 STATS LOCAL VITERBI -9.5278 0.71869 STATS LOCAL FORWARD -3.5958 0.71869 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.26902 1.62367 1.42094 1.27214 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 0.00000 * 1 3.37504 0.19898 3.18053 2.25712 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 2 2.36809 1.44633 2.12540 0.59507 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 3 0.65294 2.54533 1.18236 2.35933 3 A - - < 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 4 3.38750 0.19785 3.18683 2.25940 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 5 1.26740 2.68959 0.59902 2.29085 5 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 6 1.99448 2.11291 0.45719 2.20756 6 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 7 1.60461 2.23628 0.81764 1.38348 7 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 8 2.89186 3.79455 0.11923 3.36877 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 9 0.12644 3.42809 3.13402 3.15162 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 10 2.78852 2.72245 3.31251 0.17871 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 11 2.89186 3.79455 0.11923 3.36877 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 12 0.12644 3.42809 3.13402 3.15162 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 13 2.15356 2.26784 2.35275 0.37792 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 14 1.03558 2.06771 2.23037 0.88912 14 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 15 1.49327 1.44057 2.02515 0.89994 15 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 16 1.31535 1.36372 2.03350 1.06411 16 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 17 0.86029 1.78277 1.80449 1.40964 17 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 18 0.60307 1.91362 1.88188 1.87718 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.38115 4.07297 1.20431 1.46634 0.26236 1.09861 0.40547 19 1.18171 1.88577 1.05534 1.64268 19 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74047 3.74047 1.46634 0.26236 1.05814 0.42633 20 0.53596 2.10861 1.93655 1.90189 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04263 3.86965 3.86965 1.46634 0.26236 2.62507 0.07519 21 0.70421 1.89112 1.91060 1.57694 21 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04263 3.86965 3.86965 1.46634 0.26236 1.42367 0.27553 22 1.93982 0.87963 2.49434 1.02504 22 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04061 3.91701 3.91701 1.46634 0.26236 0.19141 1.74752 23 2.78852 2.72245 3.31251 0.17871 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 24 2.89186 3.79455 0.11923 3.36877 24 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 25 0.12644 3.42809 3.13402 3.15162 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 26 0.25023 2.93866 2.33238 2.63975 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 27 3.07499 0.16065 3.64997 2.57400 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 28 2.78852 2.72245 3.31251 0.17871 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 29 3.07499 0.16065 3.64997 2.57400 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 30 2.78852 2.72245 3.31251 0.17871 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 31 3.07499 0.16065 3.64997 2.57400 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 32 2.78852 2.72245 3.31251 0.17871 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 33 3.07499 0.16065 3.64997 2.57400 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 34 2.78852 2.72245 3.31251 0.17871 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 35 2.78852 2.72245 3.31251 0.17871 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 36 1.49838 2.04525 1.89047 0.70086 36 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 37 3.07499 0.16065 3.64997 2.57400 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 38 2.78852 2.72245 3.31251 0.17871 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 39 2.89186 3.79455 0.11923 3.36877 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 40 0.12644 3.42809 3.13402 3.15162 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 41 1.62955 2.06254 1.69232 0.70773 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 42 1.99448 2.11291 0.45719 2.20756 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 43 1.59220 1.99335 0.87853 1.40695 43 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 44 1.12600 1.87859 1.66110 1.09981 44 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 45 1.89915 1.54896 2.22752 0.63480 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 46 2.14683 1.54452 2.67538 0.50941 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 47 0.33579 2.76878 1.99684 2.44499 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 48 2.26243 3.34585 0.21305 2.94590 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 49 2.78852 2.72245 3.31251 0.17871 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 50 2.89186 3.79455 0.11923 3.36877 50 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 51 2.89186 3.79455 0.11923 3.36877 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 52 0.12644 3.42809 3.13402 3.15162 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 53 2.89186 3.79455 0.11923 3.36877 53 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 54 0.12644 3.42809 3.13402 3.15162 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 55 0.42886 1.97520 2.43658 2.09920 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 56 0.24953 2.94043 2.33560 2.64173 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.16950 4.07297 1.97409 1.46634 0.26236 1.09861 0.40547 57 0.70478 2.13904 1.74577 1.54411 57 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03955 3.94302 3.94302 1.46634 0.26236 0.21929 1.62501 58 1.43335 1.24060 1.51718 1.37456 58 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 59 0.95544 1.66031 1.67626 1.43463 59 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 60 1.22465 1.40529 1.72888 1.26103 60 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 61 0.83673 2.10254 2.21832 1.09083 61 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 62 0.66329 2.16658 2.04187 1.42508 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 63 0.69244 1.97380 1.99768 1.49135 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.08311 2.76895 4.07297 0.88637 0.53128 1.09861 0.40547 64 0.53311 2.30008 2.34450 1.52751 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 65 1.17772 2.01269 1.54667 1.06295 67 u - - _ 1.38629 1.38629 1.38629 1.38629 0.19304 4.07297 1.84186 1.46634 0.26236 1.09861 0.40547 66 0.88083 1.53891 2.10865 1.38812 68 a - - _ 1.38629 1.38629 1.38629 1.38629 0.46470 1.04456 3.92040 0.10916 2.26904 0.81396 0.58537 67 2.64975 2.60696 3.16875 0.20639 70 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03743 3.99696 3.99696 1.46634 0.26236 0.32024 1.29454 68 3.07499 0.16065 3.64997 2.57400 71 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 69 2.78852 2.72245 3.31251 0.17871 72 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 70 2.89186 3.79455 0.11923 3.36877 73 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 71 0.12644 3.42809 3.13402 3.15162 74 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 72 2.53917 3.35565 0.17030 3.15200 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 73 2.58425 1.49986 2.34523 0.50160 76 U - - > 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 74 0.72275 2.29612 1.29768 1.96061 77 a - - > 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 75 2.54368 3.36220 0.16922 3.15965 78 G - - > 1.38629 1.38629 1.38629 1.38629 0.03465 4.07297 4.07297 1.46634 0.26236 1.09861 0.40547 76 2.66035 0.28247 3.24799 1.98554 79 C - - : 1.38629 1.38629 1.38629 1.38629 0.01747 4.05579 * 1.46634 0.26236 0.00000 * //