INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD27 ACC RF00086 DESC Small nucleolar RNA SNORD27 STATES 217 NODES 69 CLEN 71 W 95 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:15:00 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 8 EFFN 2.925781 CKSUM 1926658560 NULL 0.000 0.000 0.000 0.000 GA 52.00 TC 53.20 NC 51.50 EFP7GF -10.0683 0.71875 ECMLC 0.62202 -5.33287 3.56720 1600000 304391 0.003942 ECMGC 0.36835 -15.92915 -1.00322 1600000 97677 0.004095 ECMLI 0.57043 -3.45400 5.76999 1600000 231351 0.005187 ECMGI 0.40701 -8.99001 3.57741 1600000 66606 0.006005 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 95 117 -9.255 -9.195 -0.181 -3.895 -8.251 -4.505 IL 1 1 2 1 6 1 29 97 119 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 29 96 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 85 a u - - MP 3 2 3 7 6 2 31 95 118 -9.096 -9.035 -0.021 -7.811 -8.091 -8.486 -3.037 -2.656 -3.095 2.132 -2.746 -3.932 1.482 -3.136 -3.111 1.401 -3.606 -0.507 1.806 -3.285 -0.479 -2.056 ML 4 2 3 7 6 1 27 93 116 -7.200 -7.546 -1.050 -1.101 -7.396 -4.925 1.294 -1.241 -0.978 -0.698 MR 5 2 3 7 6 1 25 93 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 22 91 113 -9.880 -8.579 -4.376 -5.058 -5.075 -0.171 IL 7 7 5 7 6 1 28 95 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 28 94 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 84 c g - - MP 9 8 6 13 6 2 30 93 116 -9.152 -4.036 -0.110 -7.868 -8.148 -8.543 -1.877 -2.025 -2.054 1.418 -0.645 -2.894 1.852 -2.320 -0.113 1.026 -2.669 -0.545 1.358 -2.197 -0.025 -1.258 ML 10 8 6 13 6 1 26 92 114 -6.738 -7.084 -0.800 -1.492 -6.933 -4.463 -0.092 0.515 -0.796 0.081 MR 11 8 6 13 6 1 24 91 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 21 90 113 -9.880 -8.579 -1.040 -5.058 -5.075 -1.151 IL 13 13 5 13 6 1 27 92 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 27 92 115 -2.856 -0.346 -6.367 -4.535 -5.640 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 82 U A - - MP 15 14 6 19 6 2 28 91 113 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -5.048 -4.886 -4.786 -1.131 -3.563 -5.269 0.774 -4.312 -4.785 -0.978 -5.115 -2.759 3.621 -5.159 -1.220 -3.503 ML 16 14 6 19 6 1 24 90 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 22 89 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 20 88 110 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 25 90 113 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 25 90 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 81 c g - - MP 21 20 6 25 4 2 26 89 111 -7.307 -7.514 -0.041 -5.929 -3.472 -3.336 -3.481 1.270 -2.666 -4.214 2.738 -3.274 -3.466 0.689 -3.940 -1.255 1.616 -3.675 -0.323 -2.353 ML 22 20 6 25 4 1 23 89 111 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 21 88 111 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 19 87 110 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 25 90 113 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 24 89 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 27 26 6 29 3 1 25 87 109 -8.301 -0.016 -6.955 0.888 0.123 -1.338 -0.589 D 28 26 6 29 3 0 19 85 108 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 24 88 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 30 29 3 32 3 1 24 86 108 -8.301 -0.016 -6.955 1.583 -2.147 -1.082 -1.704 D 31 29 3 32 3 0 18 84 107 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 23 87 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 33 32 3 35 3 1 23 85 107 -8.301 -0.016 -6.955 -0.237 -1.145 -1.580 1.242 D 34 32 3 35 3 0 17 83 106 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 22 86 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 36 35 3 38 3 1 22 84 106 -8.301 -0.016 -6.955 -2.279 -3.594 1.842 -2.978 D 37 35 3 38 3 0 17 82 105 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 21 85 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 39 38 3 41 3 1 22 83 105 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 40 38 3 41 3 0 16 81 104 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 20 84 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 42 41 3 44 3 1 21 82 104 -8.301 -0.016 -6.955 -2.126 -2.013 -2.885 1.760 D 43 41 3 44 3 0 15 80 102 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 20 83 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 45 44 3 47 3 1 20 81 103 -2.186 -0.373 -6.955 -2.279 -3.594 1.842 -2.978 D 46 44 3 47 3 0 14 78 101 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 20 81 103 -2.151 -0.434 -4.851 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - A - - - ML 48 47 3 50 3 1 19 79 102 -8.301 -0.016 -6.955 1.350 -1.847 -0.361 -1.341 D 49 47 3 50 3 0 14 77 100 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 18 81 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - A - - - ML 51 50 3 53 3 1 19 78 101 -8.301 -0.016 -6.955 1.009 -0.056 -1.352 -0.657 D 52 50 3 53 3 0 13 76 99 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 17 80 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - u - - - ML 54 53 3 56 3 1 18 77 100 -8.301 -0.016 -6.955 -0.229 0.298 -1.354 0.610 D 55 53 3 56 3 0 12 75 98 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 17 79 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - a - - - ML 57 56 3 59 3 1 17 76 99 -8.301 -0.016 -6.955 0.941 -1.106 -0.608 -0.059 D 58 56 3 59 3 0 11 74 97 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 16 77 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - a - - - ML 60 59 3 62 3 1 16 75 98 -1.753 -0.524 -6.955 0.154 -0.174 -0.015 0.017 D 61 59 3 62 3 0 11 72 94 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 16 75 98 -1.315 -0.798 -5.461 0.000 0.000 0.000 0.000 [ MATL 17 ] 20 - A - - - ML 63 62 3 65 3 1 15 72 94 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 64 62 3 65 3 0 10 71 93 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 14 74 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 21 - A - - - ML 66 65 3 68 3 1 15 71 93 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 67 65 3 68 3 0 9 70 92 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 14 73 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 22 - A - - - ML 69 68 3 71 3 1 14 70 92 -3.444 -0.152 -6.955 1.504 -1.741 -1.717 -0.834 D 70 68 3 71 3 0 9 68 90 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 11 71 93 -1.775 -1.131 -1.992 0.000 0.000 0.000 0.000 [ MATL 20 ] 24 - A - - - ML 72 71 3 74 3 1 13 69 91 -8.167 -0.018 -6.821 1.794 -2.783 -2.374 -2.367 D 73 71 3 74 3 0 8 67 89 -7.200 -2.713 -0.250 IL 74 74 3 74 3 1 13 71 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 25 - u - - - ML 75 74 3 77 3 1 13 68 90 -1.740 -0.532 -6.821 0.051 -0.070 -1.169 0.648 D 76 74 3 77 3 0 8 66 88 -7.200 -0.597 -1.591 IL 77 77 3 77 3 1 12 68 90 -2.282 -0.391 -4.982 0.000 0.000 0.000 0.000 [ MATL 22 ] 27 - G - - - ML 78 77 3 80 3 1 12 67 88 -8.301 -0.016 -6.955 -2.279 -3.594 1.842 -2.978 D 79 77 3 80 3 0 6 65 87 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 10 68 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 28 - A - - - ML 81 80 3 83 3 1 11 65 87 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 82 80 3 83 3 0 5 64 86 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 10 67 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 29 - C - - - ML 84 83 3 86 3 1 11 64 86 -8.301 -0.016 -6.955 -2.565 1.788 -3.392 -1.819 D 85 83 3 86 3 0 5 63 85 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 9 66 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 30 - A - - - ML 87 86 3 89 3 1 10 63 85 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 88 86 3 89 3 0 4 62 84 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 8 65 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 31 - A - - - ML 90 89 3 92 3 1 9 62 84 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 91 89 3 92 3 0 3 61 83 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 8 64 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 32 - G - - - ML 93 92 3 95 3 1 9 61 83 -8.301 -0.016 -6.955 -2.279 -3.594 1.842 -2.978 D 94 92 3 95 3 0 3 60 82 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 7 63 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 33 - C - - - ML 96 95 3 98 3 1 8 60 82 -8.301 -0.016 -6.955 -2.565 1.788 -3.392 -1.819 D 97 95 3 98 3 0 2 59 81 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 7 62 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 34 - A - - - ML 99 98 3 101 3 1 8 59 81 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 100 98 3 101 3 0 2 58 80 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 6 61 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 35 - U - - - ML 102 101 3 104 3 1 7 58 80 -8.301 -0.016 -6.955 -2.126 -2.013 -2.885 1.760 D 103 101 3 104 3 0 1 57 79 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 5 60 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 36 - A - - - ML 105 104 3 107 3 1 7 57 79 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 106 104 3 107 3 0 1 56 78 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 5 59 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 37 - U - - - ML 108 107 3 110 3 1 6 56 78 -8.301 -0.016 -6.955 -2.126 -2.013 -2.885 1.760 D 109 107 3 110 3 0 0 55 77 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 4 58 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 38 - G - - - ML 111 110 3 113 3 1 5 55 77 -8.301 -0.016 -6.955 -2.279 -3.594 1.842 -2.978 D 112 110 3 113 3 0 0 54 76 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 4 57 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 39 - u - - - ML 114 113 3 116 3 1 5 54 76 -8.301 -0.016 -6.955 -0.412 -0.559 0.165 0.535 D 115 113 3 116 3 0 0 53 74 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 3 56 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 40 - C - - - ML 117 116 3 119 3 1 4 53 75 -8.301 -0.016 -6.955 -2.565 1.788 -3.392 -1.819 D 118 116 3 119 3 0 0 52 73 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 3 55 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 41 - U - - - ML 120 119 3 122 3 1 4 52 74 -8.301 -0.016 -6.955 -2.126 -2.013 -2.885 1.760 D 121 119 3 122 3 0 0 51 72 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 2 54 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 42 - G - - - ML 123 122 3 125 3 1 3 51 73 -8.301 -0.016 -6.955 -2.279 -3.594 1.842 -2.978 D 124 122 3 125 3 0 0 50 71 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 2 53 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 43 - A - - - ML 126 125 3 128 3 1 3 50 72 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 127 125 3 128 3 0 0 49 70 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 52 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 44 - A - - - ML 129 128 3 131 3 1 3 49 71 -8.301 -0.016 -6.955 1.477 -1.978 -0.712 -1.504 D 130 128 3 131 3 0 0 48 69 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 51 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 45 - u - - - ML 132 131 3 134 3 1 2 48 70 -8.301 -0.016 -6.955 -1.004 0.360 -1.800 0.949 D 133 131 3 134 3 0 0 46 68 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 50 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 46 - u - - - ML 135 134 3 137 3 1 2 47 69 -8.301 -0.016 -6.955 -0.342 0.089 -1.399 0.822 D 136 134 3 137 3 0 0 45 67 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 49 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 47 - U - - - ML 138 137 3 140 3 1 1 46 68 -2.266 -0.639 -2.740 -0.692 -0.568 -0.837 1.102 D 139 137 3 140 3 0 0 44 66 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 46 68 -1.622 -0.635 -5.010 0.000 0.000 0.000 0.000 [ MATL 43 ] 50 - u - - - ML 141 140 3 143 3 1 1 44 66 -8.080 -0.019 -6.735 0.137 -0.277 -1.111 0.689 D 142 140 3 143 3 0 0 43 65 -7.582 -0.434 -1.974 IL 143 143 3 143 3 1 1 46 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 51 - a - - - ML 144 143 3 146 3 1 1 43 65 -8.301 -0.016 -6.955 0.555 -0.306 -1.125 0.337 D 145 143 3 146 3 0 0 42 63 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 45 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 52 - A - - - ML 147 146 3 149 3 1 1 42 64 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 148 146 3 149 3 0 0 41 62 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 44 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 53 - u - - - ML 150 149 3 152 3 1 1 41 63 -8.301 -0.016 -6.955 0.400 -1.015 -1.278 0.826 D 151 149 3 152 3 0 0 40 61 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 43 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 54 - G - - - ML 153 152 3 155 3 1 1 40 62 -8.301 -0.016 -6.955 -2.279 -3.594 1.842 -2.978 D 154 152 3 155 3 0 0 39 60 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 42 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 55 - u - - - ML 156 155 3 158 3 1 1 39 61 -8.301 -0.016 -6.955 0.243 -1.031 -1.335 0.949 D 157 155 3 158 3 0 0 38 59 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 41 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 56 - g - - - ML 159 158 3 161 3 1 1 38 60 -2.931 -0.666 -2.068 0.012 -1.323 0.852 -0.345 D 160 158 3 161 3 0 0 37 58 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 39 60 -1.901 -0.533 -4.602 0.000 0.000 0.000 0.000 [ MATL 50 ] 58 - A - - - ML 162 161 3 164 3 1 1 37 58 -7.923 -0.021 -6.577 1.700 -2.289 -1.929 -1.823 D 163 161 3 164 3 0 0 37 58 -1.146 -3.571 -1.108 IL 164 164 3 164 3 1 1 37 59 -1.943 -0.515 -4.643 0.000 0.000 0.000 0.000 [ MATL 51 ] 60 - U - - - ML 165 164 3 167 3 1 1 36 57 -2.797 -0.239 -6.821 -0.637 -1.025 -0.450 1.093 D 166 164 3 167 3 0 0 32 53 -7.200 -0.597 -1.591 IL 167 167 3 167 3 1 1 37 59 -1.236 -0.881 -4.950 0.000 0.000 0.000 0.000 [ MATL 52 ] 63 - g - - - ML 168 167 3 170 3 1 1 32 52 -8.301 -0.016 -6.955 -0.009 -1.403 0.935 -0.482 D 169 167 3 170 3 0 0 31 51 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 34 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 64 - u - - - ML 171 170 3 173 3 1 1 31 51 -8.301 -0.016 -6.955 -0.997 0.435 -1.798 0.895 D 172 170 3 173 3 0 0 30 50 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 65 - C - - - ML 174 173 3 176 3 1 1 30 50 -8.301 -0.016 -6.955 -1.320 1.260 -2.178 -0.025 D 175 173 3 176 3 0 0 29 48 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 32 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 66 - A - - - ML 177 176 3 179 3 1 1 29 49 -8.301 -0.016 -6.955 1.270 -1.381 -1.443 -0.258 D 178 176 3 179 3 0 0 28 47 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 67 - U - - - ML 180 179 3 182 3 1 1 28 48 -8.301 -0.016 -6.955 -2.126 -2.013 -2.885 1.760 D 181 179 3 182 3 0 0 27 46 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 68 - C - - - ML 183 182 3 185 3 1 1 27 46 -8.301 -0.016 -6.955 -1.320 1.260 -2.178 -0.025 D 184 182 3 185 3 0 0 26 45 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 69 - U - - - ML 186 185 3 188 3 1 1 26 45 -8.301 -0.016 -6.955 -2.126 -2.013 -2.885 1.760 D 187 185 3 188 3 0 0 25 44 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 70 - U - - - ML 189 188 3 191 3 1 1 25 44 -8.301 -0.016 -6.955 -1.186 -0.317 -1.948 1.321 D 190 188 3 191 3 0 0 24 43 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 71 - A - - - ML 192 191 3 194 3 1 1 24 43 -8.301 -0.016 -6.955 1.350 -1.847 -0.361 -1.341 D 193 191 3 194 3 0 0 23 42 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 26 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 72 - a - - - ML 195 194 3 197 3 1 1 23 42 -8.301 -0.016 -6.955 0.315 0.276 -1.212 0.155 D 196 194 3 197 3 0 0 21 41 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 25 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 73 - u - - - ML 198 197 3 200 3 1 1 22 41 -8.301 -0.016 -6.955 -0.580 -0.545 -0.556 0.975 D 199 197 3 200 3 0 0 20 40 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 24 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 74 - u - - - ML 201 200 3 203 3 1 1 21 40 -2.174 -0.376 -6.955 0.449 -1.013 -1.263 0.785 D 202 200 3 203 3 0 0 17 36 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 21 41 -1.392 -0.758 -5.182 0.000 0.000 0.000 0.000 [ MATL 64 ] 77 - C - - - ML 204 203 3 206 3 1 1 16 34 -8.301 -0.016 -6.955 -2.565 1.788 -3.392 -1.819 D 205 203 3 206 3 0 0 16 34 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 78 - U - - - ML 207 206 3 209 3 1 1 15 33 -8.301 -0.016 -6.955 -2.126 -2.013 -2.885 1.760 D 208 206 3 209 3 0 0 15 33 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 79 - G - - - ML 210 209 3 212 3 1 1 13 31 -8.301 -0.016 -6.955 -2.279 -3.594 1.842 -2.978 D 211 209 3 212 3 0 0 13 32 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 80 - A - - - ML 213 212 3 215 2 1 1 1 1 * 0.000 1.832 -3.053 -2.619 -2.665 D 214 212 3 215 2 0 0 0 0 * 0.000 IL 215 215 3 215 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 68 ] - - - - - - E 216 215 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD27 ACC RF00086 DESC Small nucleolar RNA SNORD27 LENG 71 MAXL 153 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:15:00 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 8 EFFN 3.308594 CKSUM 1926658560 STATS LOCAL MSV -8.1453 0.71875 STATS LOCAL VITERBI -9.2615 0.71875 STATS LOCAL FORWARD -3.4497 0.71875 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.06287 1.73007 1.58472 1.30099 1.38629 1.38629 1.38629 1.38629 0.13599 4.19237 2.18889 1.46634 0.26236 0.00000 * 1 1.09104 1.70267 1.58727 1.28211 1 a - - < 1.38629 1.38629 1.38629 1.38629 0.03404 4.09042 4.09042 1.46634 0.26236 2.24229 0.11229 2 1.53165 1.22846 1.45253 1.35829 2 c - - < 1.38629 1.38629 1.38629 1.38629 0.03404 4.09042 4.09042 1.46634 0.26236 0.23880 1.54914 3 3.37515 2.28401 3.22522 0.19338 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 4 1.76450 0.81397 2.03928 1.36449 4 c - - < 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 5 0.74870 1.28336 2.37518 1.85205 5 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 6 0.26713 2.97259 2.16575 2.67953 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 7 1.57085 2.24335 2.55124 0.49751 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 8 3.11461 4.04259 0.09316 3.61180 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 9 0.09936 3.65503 3.34054 3.40208 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 10 3.00686 2.90515 3.53732 0.14304 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 11 3.11461 4.04259 0.09316 3.61180 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.31057 1.37889 4.19237 0.11595 2.21199 1.09861 0.40547 12 0.42734 2.75566 1.63601 2.41425 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 13 0.66270 1.41261 2.38680 1.90305 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 14 1.56348 1.15917 2.37100 0.95852 15 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 15 0.71669 2.19192 1.82068 1.43543 16 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 16 1.28486 1.49933 1.38600 1.38646 17 a - - _ 1.38629 1.38629 1.38629 1.38629 0.43211 1.09138 4.19237 0.59317 0.80425 1.09861 0.40547 17 0.09936 3.65503 3.34054 3.40208 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 18 0.09936 3.65503 3.34054 3.40208 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 19 0.31954 2.66873 2.65925 2.00862 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 20 0.12205 3.46116 3.16402 3.18816 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.13599 4.19237 2.18889 1.46634 0.26236 1.09861 0.40547 21 1.35508 1.42676 2.23038 0.93013 25 u - - _ 1.38629 1.38629 1.38629 1.38629 0.44581 1.07014 4.09042 0.09487 2.40230 0.23880 1.54914 22 3.11461 4.04259 0.09316 3.61180 27 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 23 0.09936 3.65503 3.34054 3.40208 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 24 3.34611 0.12352 3.91178 2.79742 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 25 0.09936 3.65503 3.34054 3.40208 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 26 0.09936 3.65503 3.34054 3.40208 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 27 3.11461 4.04259 0.09316 3.61180 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 28 3.34611 0.12352 3.91178 2.79742 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 29 0.09936 3.65503 3.34054 3.40208 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 30 3.00686 2.90515 3.53732 0.14304 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 31 0.09936 3.65503 3.34054 3.40208 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 32 3.00686 2.90515 3.53732 0.14304 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 33 3.11461 4.04259 0.09316 3.61180 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 34 1.70565 1.78505 1.25229 1.00866 39 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 35 3.34611 0.12352 3.91178 2.79742 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 36 3.00686 2.90515 3.53732 0.14304 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 37 3.11461 4.04259 0.09316 3.61180 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 38 0.09936 3.65503 3.34054 3.40208 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 39 0.33972 2.84999 1.89199 2.53309 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 40 2.15585 1.11739 2.71410 0.71172 45 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 41 1.64678 1.31138 2.40403 0.80401 46 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 42 1.91718 1.79928 1.98057 0.59862 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.52547 1.43204 1.77253 0.39893 1.11180 1.09861 0.40547 43 1.29263 1.57887 2.18699 0.89897 50 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 0.16371 1.89040 44 0.99034 1.59915 2.19917 1.15333 51 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 45 0.09936 3.65503 3.34054 3.40208 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 46 1.10217 2.13670 2.31844 0.79545 53 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 47 3.11461 4.04259 0.09316 3.61180 54 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 48 1.21625 2.15097 2.36198 0.70713 55 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 49 1.39400 2.35407 0.76590 1.65016 56 g - - _ 1.38629 1.38629 1.38629 1.38629 0.31057 1.86481 2.18889 0.18481 1.77943 1.09861 0.40547 50 0.18051 3.09928 2.83723 2.78893 58 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03404 4.09042 4.09042 1.46634 0.26236 2.24229 0.11229 51 1.88249 2.14899 1.70333 0.59945 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.20861 1.76285 4.09042 0.76178 0.62892 0.23880 1.54914 52 1.40986 2.41306 0.70764 1.75170 63 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 53 2.15072 1.06309 2.71295 0.75104 64 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 54 2.39548 0.48023 3.00097 1.42506 65 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 55 0.48129 2.40291 2.45094 1.58304 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 56 3.00686 2.90515 3.53732 0.14304 67 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 57 2.39548 0.48023 3.00097 1.42506 68 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 58 3.00686 2.90515 3.53732 0.14304 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 59 2.29492 1.61498 2.82596 0.44460 70 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 60 0.42734 2.75566 1.63601 2.41425 71 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 61 1.16510 1.17501 2.26675 1.28865 72 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 62 1.83155 1.78013 1.77364 0.69014 73 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 63 1.06667 2.13473 2.30775 0.82534 74 u - - _ 1.38629 1.38629 1.38629 1.38629 0.31321 1.37122 4.19237 0.55776 0.84977 1.09861 0.40547 64 3.34611 0.12352 3.91178 2.79742 77 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 65 3.00686 2.90515 3.53732 0.14304 78 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 66 3.11461 4.04259 0.09316 3.61180 79 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 67 0.09936 3.65503 3.34054 3.40208 80 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 68 1.54953 2.21360 0.72883 1.63028 81 g - - > 1.38629 1.38629 1.38629 1.38629 0.03069 4.19237 4.19237 1.46634 0.26236 1.09861 0.40547 69 0.21269 3.45273 2.12724 3.19988 82 A - - > 1.38629 1.38629 1.38629 1.38629 0.38462 1.94086 1.73892 0.19863 1.71399 1.09861 0.40547 70 1.27543 1.82624 1.16942 1.38979 84 g - - > 1.38629 1.38629 1.38629 1.38629 0.14612 4.01731 2.13752 1.46634 0.26236 2.61215 0.07621 71 1.39433 1.73301 1.49324 1.04809 85 u - - > 1.38629 1.38629 1.38629 1.38629 0.02062 3.89180 * 1.46634 0.26236 0.00000 * //