INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD24 ACC RF00069 DESC Small nucleolar RNA SNORD24 STATES 232 NODES 74 CLEN 76 W 142 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 23:21:29 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00069/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 14 EFFN 3.605957 CKSUM 1628717476 NULL 0.000 0.000 0.000 0.000 GA 41.00 TC 41.00 NC 40.90 EFP7GF -9.2868 0.71866 ECMLC 0.62184 -6.13252 2.90052 1600000 330105 0.003635 ECMGC 0.39175 -15.08368 -1.55078 1600000 80260 0.004984 ECMLI 0.54693 -4.39902 5.40884 1600000 256335 0.004681 ECMGI 0.42759 -9.30892 2.45842 1600000 61271 0.006528 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 142 224 -9.348 -9.288 -0.018 -8.064 -8.344 -8.739 IL 1 1 2 1 6 1 31 143 225 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 31 143 225 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 101 u a - - MP 3 2 3 7 6 4 34 142 224 -9.348 -9.288 -0.018 -8.064 -8.344 -8.739 -3.118 -2.989 -3.205 0.570 -2.707 -4.025 1.519 -3.199 -3.212 1.332 -3.730 -0.997 2.656 -3.375 -0.459 -0.626 ML 4 2 3 7 6 1 29 140 222 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 28 140 222 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 24 136 218 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 30 141 223 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 31 141 223 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 100 G C - - MP 9 8 6 13 6 4 33 140 222 -9.348 -9.288 -0.018 -8.064 -8.344 -8.739 -3.786 -2.730 -3.752 0.782 -4.159 -4.302 0.289 -4.171 -1.445 3.245 -4.256 -0.464 0.518 -3.669 -1.666 -2.738 ML 10 8 6 13 6 1 28 138 220 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 27 138 220 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 24 134 217 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 30 139 222 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 30 139 221 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 99 C G - - MP 15 14 6 19 6 4 31 138 220 -9.348 -9.288 -0.018 -8.064 -8.344 -8.739 -5.728 -5.733 -5.204 -1.902 -3.715 -5.459 3.797 -4.646 -5.320 -1.782 -5.426 -3.726 -0.354 -5.714 -1.478 -4.130 ML 16 14 6 19 6 1 27 136 219 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 26 136 218 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 23 133 216 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 29 137 220 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 28 137 219 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 98 a u - - MP 21 20 6 25 4 2 29 136 218 -7.510 -3.987 -0.125 -6.131 -3.741 -3.305 -3.732 2.712 -3.166 -4.532 2.150 -3.628 -3.723 0.719 -4.185 -1.074 0.583 -3.995 -0.855 -2.636 ML 22 20 6 25 4 1 26 135 217 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 24 134 216 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 23 133 215 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 28 136 218 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 27 135 218 -1.687 -0.640 -4.388 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 27 26 6 29 3 1 27 134 216 -3.205 -0.177 -7.147 0.704 -1.293 0.233 -0.344 D 28 26 6 29 3 0 22 131 214 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 27 135 217 -1.242 -0.878 -4.914 0.000 0.000 0.000 0.000 [ MATL 6 ] 8 - A - - - ML 30 29 3 32 3 1 26 133 215 -8.492 -0.014 -7.147 1.080 -1.424 -0.253 -0.569 D 31 29 3 32 3 0 21 130 213 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 26 133 216 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 9 - U - - - ML 33 32 3 35 3 1 25 132 214 -8.492 -0.014 -7.147 -2.491 -2.320 -3.260 1.814 D 34 32 3 35 3 0 21 129 212 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 25 132 215 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 10 - G - - - ML 36 35 3 38 3 1 24 131 213 -4.506 -0.076 -7.147 -2.644 -3.998 1.880 -3.371 D 37 35 3 38 3 0 20 128 211 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 24 131 213 -1.628 -0.674 -4.329 0.000 0.000 0.000 0.000 [ MATL 9 ] 12 - A - - - ML 39 38 3 41 3 1 24 130 212 -8.492 -0.014 -7.147 1.872 -3.430 -2.963 -3.081 D 40 38 3 41 3 0 19 127 210 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 23 130 213 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 13 - U - - - ML 42 41 3 44 3 1 23 129 211 -8.492 -0.014 -7.147 -2.491 -2.320 -3.260 1.814 D 43 41 3 44 3 0 19 126 209 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 22 129 212 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 14 - G - - - ML 45 44 3 47 3 1 22 128 210 -8.492 -0.014 -7.147 -2.644 -3.998 1.880 -3.371 D 46 44 3 47 3 0 18 125 208 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 22 128 211 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 15 - U - - - ML 48 47 3 50 3 1 21 127 209 -8.492 -0.014 -7.147 -0.047 -0.668 -1.435 1.024 D 49 47 3 50 3 0 17 124 207 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 21 127 210 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 16 - A - - - ML 51 50 3 53 3 1 20 126 208 -8.492 -0.014 -7.147 1.127 -0.703 -0.667 -0.807 D 52 50 3 53 3 0 17 123 206 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 20 126 209 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 17 - A - - - ML 54 53 3 56 3 1 19 125 207 -8.492 -0.358 -2.204 1.872 -3.430 -2.963 -3.081 D 55 53 3 56 3 0 16 123 205 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 20 126 208 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 18 - u - - - ML 57 56 3 59 3 1 20 124 207 -3.093 -0.195 -6.807 0.441 -0.521 -1.083 0.559 D 58 56 3 59 3 0 16 121 204 -8.100 -2.198 -0.361 IL 59 59 3 59 3 1 20 125 207 -1.821 -0.570 -4.521 0.000 0.000 0.000 0.000 [ MATL 16 ] 20 - A - - - ML 60 59 3 62 3 1 19 123 205 -8.222 -0.017 -6.876 1.162 -0.378 -1.346 -0.739 D 61 59 3 62 3 0 15 121 203 -7.889 -1.656 -0.560 IL 62 62 3 62 3 1 19 124 206 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 21 - a - - - ML 63 62 3 65 3 1 18 122 204 -8.314 -0.103 -3.932 0.846 -1.725 0.537 -1.156 D 64 62 3 65 3 0 14 120 202 -7.525 -3.038 -0.196 IL 65 65 3 65 3 1 18 123 205 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 22 - a - - - ML 66 65 3 68 3 1 17 121 203 -8.229 -0.087 -4.183 0.945 -0.372 -1.189 -0.212 D 67 65 3 68 3 0 14 119 201 -7.865 -3.378 -0.153 IL 68 68 3 68 3 1 18 122 204 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 23 - A - - - ML 69 68 3 71 3 1 17 120 203 -8.160 -0.018 -6.814 1.144 -0.823 -1.238 -0.321 D 70 68 3 71 3 0 14 119 201 -8.080 -0.293 -2.471 IL 71 71 3 71 3 1 16 121 203 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 24 - U - - - ML 72 71 3 74 3 1 16 119 202 -8.492 -0.014 -7.147 -0.945 -1.535 -2.155 1.541 D 73 71 3 74 3 0 12 117 199 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 15 120 202 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 25 - A - - - ML 75 74 3 77 3 1 15 118 201 -8.492 -0.014 -7.147 1.872 -3.430 -2.963 -3.081 D 76 74 3 77 3 0 11 116 198 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 15 119 201 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 26 - U - - - ML 78 77 3 80 3 1 14 117 200 -8.492 -0.014 -7.147 -0.974 -0.659 -1.200 1.276 D 79 77 3 80 3 0 10 115 197 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 14 118 200 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 27 - U - - - ML 81 80 3 83 3 1 13 116 199 -8.492 -0.072 -4.447 -2.491 -2.320 -3.260 1.814 D 82 80 3 83 3 0 10 114 197 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 13 117 199 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 28 - U - - - ML 84 83 3 86 3 1 12 115 198 -8.435 -0.015 -7.089 -0.867 -1.461 -2.061 1.510 D 85 83 3 86 3 0 9 114 196 -6.776 -0.874 -1.167 IL 86 86 3 86 3 1 12 116 198 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 29 - G - - - ML 87 86 3 89 3 1 11 114 197 -8.492 -0.014 -7.147 -1.644 -2.640 1.658 -1.455 D 88 86 3 89 3 0 8 112 195 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 11 115 197 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 30 - C - - - ML 90 89 3 92 3 1 10 113 196 -8.492 -0.014 -7.147 -1.751 1.575 -1.736 -1.242 D 91 89 3 92 3 0 8 112 194 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 10 114 196 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 31 - U - - - ML 93 92 3 95 3 1 9 112 195 -8.492 -0.500 -1.786 -2.491 -2.320 -3.260 1.814 D 94 92 3 95 3 0 7 111 193 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 11 113 196 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 32 - a - - - ML 96 95 3 98 3 1 10 112 194 -8.013 -0.020 -6.667 0.952 -1.008 -1.113 0.146 D 97 95 3 98 3 0 6 111 193 -8.429 -0.225 -2.821 IL 98 98 3 98 3 1 9 112 195 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 33 - a - - - ML 99 98 3 101 3 1 9 111 193 -8.492 -0.014 -7.147 0.985 0.106 -1.498 -0.759 D 100 98 3 101 3 0 3 108 191 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 8 111 194 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 34 - U - - - ML 102 101 3 104 3 1 9 110 192 -8.492 -0.014 -7.147 -1.695 -1.008 -2.446 1.590 D 103 101 3 104 3 0 2 107 190 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 7 110 193 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 35 - C - - - ML 105 104 3 107 3 1 8 109 191 -8.492 -0.014 -7.147 -1.201 1.285 -1.460 -0.387 D 106 104 3 107 3 0 2 106 189 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 6 109 192 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 36 - U - - - ML 108 107 3 110 3 1 7 108 190 -8.492 -0.014 -7.147 -0.392 -0.707 -1.622 1.202 D 109 107 3 110 3 0 1 105 188 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 6 108 191 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 37 - u - - - ML 111 110 3 113 3 1 7 107 189 -8.492 -0.014 -7.147 -0.226 -1.086 0.200 0.609 D 112 110 3 113 3 0 0 104 186 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 5 107 190 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 38 - a - - - ML 114 113 3 116 3 1 6 106 188 -8.492 -0.014 -7.147 0.581 -1.047 0.543 -0.828 D 115 113 3 116 3 0 0 103 185 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 4 106 189 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 39 - A - - - ML 117 116 3 119 3 1 5 105 187 -3.205 -0.177 -7.147 1.344 -1.615 -0.811 -0.823 D 118 116 3 119 3 0 0 102 184 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 4 105 187 -1.879 -0.543 -4.579 0.000 0.000 0.000 0.000 [ MATL 36 ] 41 - u - - - ML 120 119 3 122 3 1 4 104 186 -8.492 -0.014 -7.147 0.349 -1.018 -0.878 0.756 D 121 119 3 122 3 0 0 101 183 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 3 104 186 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 42 - G - - - ML 123 122 3 125 3 1 3 103 185 -8.492 -0.014 -7.147 -0.796 -2.069 1.444 -1.107 D 124 122 3 125 3 0 0 100 182 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 3 103 185 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 43 - a - - - ML 126 125 3 128 3 1 2 102 184 -8.492 -0.014 -7.147 0.809 -0.658 -0.032 -0.654 D 127 125 3 128 3 0 0 99 181 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 2 102 184 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 44 - u - - - ML 129 128 3 131 3 1 1 101 183 -8.492 -0.097 -4.000 0.192 -0.536 -1.305 0.818 D 130 128 3 131 3 0 0 97 179 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 2 101 184 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 45 - G - - - ML 132 131 3 134 3 1 3 100 182 -8.410 -0.015 -7.064 0.331 -1.984 1.081 -1.419 D 133 131 3 134 3 0 0 94 176 -6.973 -2.486 -0.298 IL 134 134 3 134 3 1 1 100 183 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 46 - g - - - ML 135 134 3 137 3 1 3 99 181 -8.410 -0.015 -7.064 0.195 -0.810 0.604 -0.387 D 136 134 3 137 3 0 0 91 173 -6.973 -2.486 -0.298 IL 137 137 3 137 3 1 1 99 181 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 47 - u - - - ML 138 137 3 140 3 1 3 98 180 -1.846 -0.485 -7.064 0.080 -0.979 -0.586 0.823 D 139 137 3 140 3 0 0 81 163 -6.973 -2.486 -0.298 IL 140 140 3 140 3 1 3 103 185 -0.323 -2.372 -7.045 0.000 0.000 0.000 0.000 [ MATL 43 ] 61 - G - - - ML 141 140 3 143 3 1 2 53 81 -8.410 -0.015 -7.064 -1.455 -2.416 1.598 -1.252 D 142 140 3 143 3 0 0 52 80 -6.973 -0.728 -1.364 IL 143 143 3 143 3 1 1 54 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 62 - a - - - ML 144 143 3 146 3 1 2 52 80 -8.492 -0.014 -7.147 0.906 -0.644 -0.758 -0.159 D 145 143 3 146 3 0 0 50 78 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 53 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 63 - U - - - ML 147 146 3 149 3 1 1 51 79 -8.492 -0.014 -7.147 -0.730 -0.892 -1.845 1.367 D 148 146 3 149 3 0 0 49 77 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 52 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 64 - G - - - ML 150 149 3 152 3 1 1 50 78 -8.492 -0.014 -7.147 -2.644 -3.998 1.880 -3.371 D 151 149 3 152 3 0 0 48 76 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 51 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 65 - A - - - ML 153 152 3 155 3 1 1 49 77 -8.492 -0.014 -7.147 1.872 -3.430 -2.963 -3.081 D 154 152 3 155 3 0 0 47 75 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 50 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 66 - c - - - ML 156 155 3 158 3 1 1 48 76 -8.492 -0.014 -7.147 -0.823 0.805 -1.184 0.320 D 157 155 3 158 3 0 0 46 74 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 49 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 67 - A - - - ML 159 158 3 161 3 1 1 47 75 -4.221 -0.090 -7.147 1.098 -1.431 -0.290 -0.577 D 160 158 3 161 3 0 0 45 73 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 48 76 -1.669 -0.651 -4.369 0.000 0.000 0.000 0.000 [ MATL 50 ] 69 - u - - - ML 162 161 3 164 3 1 1 46 74 -8.492 -0.014 -7.147 0.272 0.087 -1.263 0.394 D 163 161 3 164 3 0 0 44 72 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 47 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 70 - U - - - ML 165 164 3 167 3 1 1 45 73 -8.492 -0.014 -7.147 -0.229 -1.287 -1.721 1.283 D 166 164 3 167 3 0 0 43 71 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 46 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 71 - u - - - ML 168 167 3 170 3 1 1 44 72 -8.492 -0.014 -7.147 0.065 0.057 -1.314 0.596 D 169 167 3 170 3 0 0 42 70 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 45 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 72 - u - - - ML 171 170 3 173 3 1 1 43 71 -8.492 -0.132 -3.567 -0.223 -0.631 -0.693 0.910 D 172 170 3 173 3 0 0 41 69 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 44 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 73 - a - - - ML 174 173 3 176 3 1 1 42 70 -8.376 -0.092 -4.084 0.652 -0.989 -0.775 0.422 D 175 173 3 176 3 0 0 39 68 -7.196 -2.709 -0.251 IL 176 176 3 176 3 1 1 43 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 74 - A - - - ML 177 176 3 179 3 1 1 41 69 -2.372 -0.324 -6.954 1.179 -1.287 -1.373 -0.090 D 178 176 3 179 3 0 0 39 67 -7.587 -0.432 -1.978 IL 179 179 3 179 3 1 1 42 70 -1.192 -0.901 -5.222 0.000 0.000 0.000 0.000 [ MATL 56 ] 77 - A - - - ML 180 179 3 182 3 1 1 39 67 -8.492 -0.014 -7.147 1.551 -1.186 -1.882 -1.477 D 181 179 3 182 3 0 0 37 65 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 40 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 78 - C - - - ML 183 182 3 185 3 1 1 38 66 -8.492 -0.014 -7.147 -1.458 1.252 -2.339 0.080 D 184 182 3 185 3 0 0 36 64 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 39 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 79 - C - - - ML 186 185 3 188 3 1 1 37 65 -8.492 -0.014 -7.147 -3.011 1.842 -3.816 -2.191 D 187 185 3 188 3 0 0 35 63 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 38 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 80 - A - - - ML 189 188 3 191 3 1 1 36 64 -8.492 -0.014 -7.147 1.872 -3.430 -2.963 -3.081 D 190 188 3 191 3 0 0 34 62 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 37 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 81 - C - - - ML 192 191 3 194 3 1 1 35 63 -8.492 -0.014 -7.147 -3.011 1.842 -3.816 -2.191 D 193 191 3 194 3 0 0 33 61 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 36 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 82 - C - - - ML 195 194 3 197 3 1 1 34 62 -8.492 -0.014 -7.147 -3.011 1.842 -3.816 -2.191 D 196 194 3 197 3 0 0 32 60 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 35 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 83 - A - - - ML 198 197 3 200 3 1 1 33 61 -8.492 -0.014 -7.147 1.872 -3.430 -2.963 -3.081 D 199 197 3 200 3 0 0 31 59 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 34 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 84 - A - - - ML 201 200 3 203 3 1 1 32 60 -8.492 -0.014 -7.147 1.451 -1.709 -1.749 -0.595 D 202 200 3 203 3 0 0 30 58 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 33 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 85 - G - - - ML 204 203 3 206 3 1 1 31 59 -8.492 -0.014 -7.147 -1.703 -2.717 1.679 -1.560 D 205 203 3 206 3 0 0 29 57 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 32 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 86 - A - - - ML 207 206 3 209 3 1 1 30 58 -8.492 -0.014 -7.147 1.872 -3.430 -2.963 -3.081 D 208 206 3 209 3 0 0 28 56 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 31 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 87 - U - - - ML 210 209 3 212 3 1 1 29 57 -8.492 -0.014 -7.147 -2.491 -2.320 -3.260 1.814 D 211 209 3 212 3 0 0 26 55 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 30 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 88 - C - - - ML 213 212 3 215 3 1 1 28 56 -3.205 -0.177 -7.147 -2.171 1.651 -3.034 -0.957 D 214 212 3 215 3 0 0 24 52 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 30 59 -0.938 -1.150 -5.186 0.000 0.000 0.000 0.000 [ MATL 68 ] 92 - g - - - ML 216 215 3 218 3 1 1 17 36 -8.492 -0.014 -7.147 -0.080 -1.207 0.615 0.124 D 217 215 3 218 3 0 0 17 35 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 93 - C - - - ML 219 218 3 221 3 1 1 16 34 -8.492 -0.014 -7.147 -3.011 1.842 -3.816 -2.191 D 220 218 3 221 3 0 0 16 34 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 94 - U - - - ML 222 221 3 224 3 1 1 14 33 -8.492 -0.014 -7.147 -2.491 -2.320 -3.260 1.814 D 223 221 3 224 3 0 0 15 33 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 95 - G - - - ML 225 224 3 227 3 1 1 13 31 -8.492 -0.014 -7.147 -2.644 -3.998 1.880 -3.371 D 226 224 3 227 3 0 0 13 32 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 96 - A - - - ML 228 227 3 230 2 1 1 1 1 * 0.000 1.872 -3.430 -2.963 -3.081 D 229 227 3 230 2 0 0 0 0 * 0.000 IL 230 230 3 230 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 73 ] - - - - - - E 231 230 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD24 ACC RF00069 DESC Small nucleolar RNA SNORD24 LENG 76 MAXL 187 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 23:21:29 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00069/CM NSEQ 14 EFFN 4.091309 CKSUM 1628717476 STATS LOCAL MSV -8.3123 0.71866 STATS LOCAL VITERBI -9.2801 0.71866 STATS LOCAL FORWARD -3.2809 0.71866 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.18784 1.59671 1.52692 1.28969 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 0.00000 * 1 2.21748 1.65584 1.63227 0.68379 1 U - - < 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 2 2.11693 2.53910 0.38211 2.13504 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 3 3.95504 0.11443 3.79899 2.70940 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 4 0.79821 1.22237 2.08047 2.03665 4 a - - < 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 5 0.88720 2.33204 1.20915 1.64691 5 a - - _ 1.38629 1.38629 1.38629 1.38629 0.15027 2.07033 4.31401 0.76783 0.62366 1.09861 0.40547 6 0.61740 2.43124 1.56110 1.81510 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 7 3.27045 3.12793 3.80703 0.10983 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 8 3.37005 4.32349 0.07072 3.88062 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.07328 2.85988 4.31401 0.41566 1.07854 1.09861 0.40547 9 0.07484 3.92554 3.58954 3.69829 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 10 3.27045 3.12793 3.80703 0.10983 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 11 3.37005 4.32349 0.07072 3.88062 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 12 1.42630 1.87301 2.43164 0.65730 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 13 0.58181 1.88227 1.86551 2.00955 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 14 0.07484 3.92554 3.58954 3.69829 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.29228 4.31401 1.42688 1.46634 0.26236 1.09861 0.40547 15 1.07138 1.76013 2.16816 0.99140 18 u - - _ 1.38629 1.38629 1.38629 1.38629 0.17305 1.95471 4.05695 0.22867 1.58765 1.58552 0.22921 16 0.55336 1.64624 2.38563 1.96482 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03340 4.10894 4.10894 1.46634 0.26236 1.14409 0.38348 17 0.78145 2.66991 0.99200 2.28116 21 a - - _ 1.38629 1.38629 1.38629 1.38629 0.09745 4.17825 2.55712 1.46634 0.26236 2.52475 0.08347 18 0.70923 1.64474 2.25834 1.55878 22 a - - _ 1.38629 1.38629 1.38629 1.38629 0.08675 4.11403 2.70673 1.46634 0.26236 2.80618 0.06234 19 0.56788 1.97871 2.29809 1.63694 23 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03503 4.06230 4.06230 1.46634 0.26236 0.10745 2.28399 20 2.09612 2.54128 2.98564 0.29063 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 21 0.07484 3.92554 3.58954 3.69829 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 22 2.13480 1.86810 2.24909 0.47511 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 23 3.27045 3.12793 3.80703 0.10983 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.07046 4.31401 2.90671 1.46634 0.26236 1.09861 0.40547 24 2.04044 2.48645 2.91678 0.31100 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02831 4.27185 4.27185 1.46634 0.26236 0.39851 1.11266 25 2.63731 3.33511 0.21523 2.44780 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 26 2.75027 0.25902 2.64543 2.37182 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 27 3.27045 3.12793 3.80703 0.10983 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.39737 4.31401 1.15666 1.46634 0.26236 1.09861 0.40547 28 0.70585 2.12297 2.19928 1.28824 32 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03904 3.95568 3.95568 1.46634 0.26236 0.08165 2.54585 29 0.67967 1.29503 2.50090 1.98546 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 30 2.67509 2.12571 3.19586 0.26030 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 31 2.30989 0.46143 2.44191 1.69634 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 32 1.68222 1.90403 2.57514 0.52945 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 33 1.56482 2.18334 1.22898 0.95290 37 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 34 0.97657 2.13960 0.98484 2.02346 38 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 35 0.43219 2.57289 1.96956 2.00188 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.15027 2.07033 4.31401 0.20011 1.70728 1.09861 0.40547 36 1.13800 2.13527 2.01392 0.84895 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 37 1.98783 2.90091 0.36046 2.20111 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 38 0.80966 1.84914 1.39954 1.89108 43 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 39 1.25130 1.77261 2.33185 0.80550 44 u - - _ 1.38629 1.38629 1.38629 1.38629 0.09147 4.31401 2.60323 1.46634 0.26236 1.09861 0.40547 40 1.15594 2.85653 0.60992 2.47247 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02890 4.25143 4.25143 1.46634 0.26236 2.01933 0.14242 41 1.25987 1.96421 0.93979 1.68560 46 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02890 4.25143 4.25143 1.46634 0.26236 2.01933 0.14242 42 1.33422 2.10510 1.79742 0.80056 47 u - - _ 1.38629 1.38629 1.38629 1.38629 0.39149 1.17212 4.25143 1.99569 0.14609 2.01933 0.14242 43 2.50083 3.17528 0.25282 2.30669 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02890 4.25143 4.25143 1.46634 0.26236 0.30855 1.32618 44 0.74196 1.84344 1.92962 1.51256 62 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 45 1.93732 2.04499 2.74709 0.41186 63 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 46 3.37005 4.32349 0.07072 3.88062 64 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 47 0.07484 3.92554 3.58954 3.69829 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 48 2.01951 0.79802 2.23835 1.16981 66 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 49 0.60468 2.43625 1.58764 1.82105 67 A - - _ 1.38629 1.38629 1.38629 1.38629 0.08454 2.69287 4.31401 0.35718 1.20280 1.09861 0.40547 50 1.19535 1.31282 2.30286 1.11361 69 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 51 1.56301 2.35342 2.66039 0.46916 70 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 52 1.34531 1.33464 2.33987 0.96772 71 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 53 1.55571 1.84214 1.87141 0.74113 72 u - - _ 1.38629 1.38629 1.38629 1.38629 0.11543 4.31401 2.34719 1.46634 0.26236 1.09861 0.40547 54 0.92095 2.10955 1.94045 1.08788 73 a - - _ 1.38629 1.38629 1.38629 1.38629 0.08782 4.22817 2.66656 1.46634 0.26236 2.21352 0.11576 55 0.54453 2.33495 2.39825 1.46018 74 A - - _ 1.38629 1.38629 1.38629 1.38629 0.27062 1.50659 4.17169 0.74204 0.64653 0.16826 1.86519 56 0.28740 2.23223 2.78797 2.51392 77 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 57 2.49807 0.48916 3.12045 1.34525 78 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 58 3.65840 0.09155 4.20081 3.06351 79 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 59 0.07484 3.92554 3.58954 3.69829 80 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 60 3.65840 0.09155 4.20081 3.06351 81 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 61 3.65840 0.09155 4.20081 3.06351 82 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 62 0.07484 3.92554 3.58954 3.69829 83 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 63 0.35602 2.64925 2.68498 1.82876 84 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 64 2.67954 3.38981 0.20150 2.52341 85 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 65 0.07484 3.92554 3.58954 3.69829 86 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 66 3.27045 3.12793 3.80703 0.10983 87 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 67 3.03135 0.21724 3.63039 2.11602 88 C - - _ 1.38629 1.38629 1.38629 1.38629 0.15027 2.07033 4.31401 1.12772 0.39122 1.09861 0.40547 68 1.45927 2.27129 0.93374 1.30440 92 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 69 3.65840 0.09155 4.20081 3.06351 93 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 70 3.27045 3.12793 3.80703 0.10983 94 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 71 3.37005 4.32349 0.07072 3.88062 95 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 72 0.07484 3.92554 3.58954 3.69829 96 A - - _ 1.38629 1.38629 1.38629 1.38629 0.09147 2.60323 4.31401 0.32903 1.27162 1.09861 0.40547 73 2.28797 2.28260 1.13851 0.74189 98 u - - > 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 74 2.99681 3.96606 0.09767 3.72308 99 G - - > 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 75 2.12733 0.46450 2.35655 1.84740 100 C - - > 1.38629 1.38629 1.38629 1.38629 0.02712 4.31401 4.31401 1.46634 0.26236 1.09861 0.40547 76 0.83114 1.76220 1.48745 1.79076 101 a - - > 1.38629 1.38629 1.38629 1.38629 0.01365 4.30054 * 1.46634 0.26236 0.00000 * //