INFERNAL1/a [1.1.4 | Dec 2020] NAME DicF ACC RF00039 DESC DicF RNA STATES 160 NODES 43 CLEN 52 W 79 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:11:56 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 5.000000 CKSUM 1458131470 NULL 0.000 0.000 0.000 0.000 GA 48.00 TC 49.50 NC 46.00 EFP7GF -9.1676 0.72304 ECMLC 0.60711 -8.28230 1.92073 1600000 587989 0.002041 ECMGC 0.44948 -15.81526 -2.43590 1600000 163599 0.002445 ECMLI 0.63101 -6.70909 2.69794 1600000 454072 0.002643 ECMGI 0.48323 -12.46825 -0.59106 1600000 124347 0.003217 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 79 112 -7.853 -8.060 -0.028 -6.474 IL 1 1 2 1 4 1 12 81 115 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 11 81 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 11 79 112 -8.820 -0.011 -7.474 -3.083 -2.826 -3.864 1.877 D 4 2 3 5 3 0 7 77 110 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 10 80 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 11 78 111 -8.820 -0.011 -7.474 -1.182 -1.550 -0.383 1.293 D 7 5 3 8 3 0 6 76 109 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 10 79 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - u - - - ML 9 8 3 11 3 1 10 77 110 -8.820 -0.011 -7.474 -1.533 0.755 -2.403 0.830 D 10 8 3 11 3 0 5 75 108 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 9 78 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - u - - - ML 12 11 3 14 3 1 9 76 109 -8.820 -0.011 -7.474 -0.929 -1.526 0.599 0.690 D 13 11 3 14 3 0 5 74 107 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 8 77 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - u - - - ML 15 14 3 17 3 1 8 75 108 -8.820 -0.011 -7.474 -0.932 -1.538 0.636 0.657 D 16 14 3 17 3 0 4 73 107 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 8 76 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 1 7 74 107 -8.820 -0.011 -7.474 -3.201 -4.609 1.920 -3.943 D 19 17 3 20 3 0 3 72 106 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 7 75 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 6 73 106 -8.820 -0.280 -2.519 -3.083 -2.826 -3.864 1.877 D 22 20 3 23 3 0 3 71 105 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 7 74 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 7 72 106 -8.553 -0.014 -7.207 0.364 -2.136 1.105 -1.584 D 25 23 3 26 3 0 2 71 104 -8.110 -0.287 -2.501 IL 26 26 3 26 3 1 5 73 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - a - - - ML 27 26 3 29 3 1 6 71 105 -8.820 -0.011 -7.474 0.894 -2.352 0.734 -1.829 D 28 26 3 29 3 0 0 69 103 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 4 72 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - u - - - ML 30 29 3 32 3 1 6 70 104 -8.820 -0.011 -7.474 -1.533 0.755 -2.403 0.830 D 31 29 3 32 3 0 0 68 102 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 3 71 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - a - - - ML 33 32 3 35 3 1 5 69 103 -8.820 -0.011 -7.474 0.615 -0.391 0.143 -0.735 D 34 32 3 35 3 0 0 67 101 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 3 70 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 36 35 3 38 3 1 4 68 102 -8.820 -0.011 -7.474 -1.710 -0.100 -2.504 1.370 D 37 35 3 38 3 0 0 66 100 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 2 69 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 39 38 3 41 3 1 3 67 101 -8.820 -0.011 -7.474 -3.083 -2.826 -3.864 1.877 D 40 38 3 41 3 0 0 65 99 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 2 68 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 42 41 3 44 3 1 3 66 100 -9.168 -0.011 -7.485 -3.083 -2.826 -3.864 1.877 D 43 41 3 44 3 0 0 64 98 -5.620 -0.734 -1.403 IL 44 44 3 44 3 1 1 66 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 55 - C - - MR 45 44 3 47 5 1 3 65 99 -7.865 -0.023 -7.680 -7.892 -8.784 -1.895 1.388 -2.820 -0.040 D 46 44 3 47 5 0 0 63 97 -5.352 -0.707 -2.978 -4.409 -2.404 IR 47 47 3 47 5 1 1 65 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 15 54 G C - - MP 48 47 3 52 6 2 3 64 98 -9.522 -9.461 -0.016 -8.238 -8.517 -8.912 -6.342 -3.890 -6.812 -0.957 -7.412 -5.284 -2.384 -7.018 -5.240 3.865 -5.496 -1.688 -2.745 -5.471 -4.546 -5.668 ML 49 47 3 52 6 1 1 62 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 3 52 6 1 1 62 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 3 52 6 0 0 59 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 1 63 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 1 63 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 16 53 G C - - MP 54 53 6 58 6 2 3 62 96 -9.522 -9.461 -0.016 -8.238 -8.517 -8.912 -6.342 -3.890 -6.812 -0.957 -7.412 -5.284 -2.384 -7.018 -5.240 3.865 -5.496 -1.688 -2.745 -5.471 -4.546 -5.668 ML 55 53 6 58 6 1 1 60 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 1 60 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 57 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 1 61 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 1 61 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 17 52 C G - - MP 60 59 6 64 6 2 3 60 94 -9.522 -9.461 -0.016 -8.238 -8.517 -8.912 -4.978 -4.962 -4.645 -1.042 -3.251 -5.046 3.341 -4.065 -4.660 -0.880 -4.949 -2.883 1.876 -5.009 -0.898 -3.459 ML 61 59 6 64 6 1 1 58 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 58 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 55 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 59 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 59 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 18 51 G C - - MP 66 65 6 70 6 2 3 58 92 -9.522 -9.461 -0.016 -8.238 -8.517 -8.912 -6.342 -3.890 -6.812 -0.957 -7.412 -5.284 -2.384 -7.018 -5.240 3.865 -5.496 -1.688 -2.745 -5.471 -4.546 -5.668 ML 67 65 6 70 6 1 1 56 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 56 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 53 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 57 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 57 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 19 50 G C - - MP 72 71 6 76 6 2 2 56 90 -9.522 -9.461 -0.181 -3.180 -8.517 -8.912 -6.342 -3.890 -6.812 -0.957 -7.412 -5.284 -2.384 -7.018 -5.240 3.865 -5.496 -1.688 -2.745 -5.471 -4.546 -5.668 ML 73 71 6 76 6 1 1 54 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 1 54 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 51 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 55 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 55 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 20 49 u g - - MP 78 77 6 82 6 2 2 54 88 -9.359 -9.298 -0.018 -8.074 -8.354 -8.749 -4.825 -4.913 -4.423 -1.146 -3.004 -4.749 2.486 -3.844 -4.479 -1.021 -4.722 -3.032 0.434 -4.824 2.890 -3.312 ML 79 77 6 82 6 1 1 53 87 -7.784 -8.130 -0.333 -2.539 -7.980 -5.509 -1.147 1.415 -1.942 -0.684 MR 80 77 6 82 6 1 1 52 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 50 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 53 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 53 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 21 48 A U - - MP 84 83 6 88 4 2 2 52 86 -7.853 -8.060 -0.028 -6.474 -5.421 -4.170 -5.143 3.837 -6.509 -7.803 -2.118 -5.083 -5.190 -0.708 -5.803 -1.473 -2.497 -6.615 -4.039 -4.031 ML 85 83 6 88 4 1 1 51 85 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 4 1 1 51 85 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 87 83 6 88 4 0 0 50 83 -4.568 -4.250 -2.265 -0.520 IL 88 88 5 88 4 1 1 52 86 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 89 89 6 89 3 1 1 52 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - U - - - ML 90 89 6 92 3 1 1 50 84 -9.168 -0.011 -7.485 -3.083 -2.826 -3.864 1.877 D 91 89 6 92 3 0 0 49 82 -5.620 -0.734 -1.403 IL 92 92 3 92 3 1 1 50 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 47 - c - - MR 93 92 3 95 3 1 1 49 83 -9.168 -0.011 -7.485 -0.758 0.564 -0.294 0.157 D 94 92 3 95 3 0 0 47 81 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 49 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 46 - U - - MR 96 95 3 98 3 1 1 48 82 -9.168 -0.011 -7.485 -3.083 -2.826 -3.864 1.877 D 97 95 3 98 3 0 0 46 80 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 48 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 45 - a - - MR 99 98 3 101 5 1 1 47 81 -7.865 -0.023 -7.680 -7.892 -8.784 0.795 0.540 -1.815 -0.925 D 100 98 3 101 5 0 0 45 79 -5.352 -0.707 -2.978 -4.409 -2.404 IR 101 101 3 101 5 1 1 47 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 23 44 C G - - MP 102 101 3 106 6 2 2 46 80 -9.522 -9.461 -0.160 -3.358 -8.517 -8.912 -6.436 -6.502 -5.772 -2.678 -4.205 -5.936 3.874 -5.224 -5.962 -2.604 -5.938 -4.563 -0.969 -6.377 -2.038 -4.766 ML 103 101 3 106 6 1 1 44 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 3 106 6 1 1 44 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 3 106 6 0 0 41 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 45 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 45 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 24 43 A U - - MP 108 107 6 112 6 2 2 44 78 -9.379 -9.318 -0.017 -8.095 -8.375 -8.770 -4.927 -3.729 -4.789 3.756 -5.797 -7.020 -1.422 -4.754 -4.724 -0.163 -5.322 -1.066 -1.824 -5.962 -3.354 -3.618 ML 109 107 6 112 6 1 1 43 77 -7.666 -8.013 -0.365 -2.421 -7.862 -5.392 1.533 -1.727 -1.423 -1.213 MR 110 107 6 112 6 1 1 42 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 39 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 43 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 43 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 25 42 G C - - MP 114 113 6 118 6 2 2 42 76 -9.522 -9.461 -0.016 -8.238 -8.517 -8.912 -6.342 -3.890 -6.812 -0.957 -7.412 -5.284 -2.384 -7.018 -5.240 3.865 -5.496 -1.688 -2.745 -5.471 -4.546 -5.668 ML 115 113 6 118 6 1 1 40 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 40 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 37 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 41 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 41 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 26 41 u a - - MP 120 119 6 124 4 2 2 40 74 -7.853 -2.298 -0.724 -2.419 -3.500 -3.572 -3.535 -0.126 -2.843 -4.240 1.288 -3.446 -3.561 -0.044 -4.036 -1.810 2.653 -3.743 1.017 1.208 ML 121 119 6 124 4 1 1 38 72 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 4 1 1 38 71 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 123 119 6 124 4 0 0 36 70 -4.568 -4.250 -2.265 -0.520 IL 124 124 5 124 4 1 1 40 74 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 125 125 6 125 3 1 1 41 75 -0.788 -1.307 -5.915 0.000 0.000 0.000 0.000 [ MATL 31 ] 27 - U - - - ML 126 125 6 128 3 1 1 24 43 -8.553 -0.014 -7.207 -2.604 -2.416 -3.376 1.829 D 127 125 6 128 3 0 0 22 41 -8.110 -3.623 -0.128 IL 128 128 3 128 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 28 - U - - - ML 129 128 3 131 3 1 1 23 42 -8.553 -0.014 -7.207 -2.604 -2.416 -3.376 1.829 D 130 128 3 131 3 0 0 21 40 -8.110 -3.623 -0.128 IL 131 131 3 131 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 29 - U - - - ML 132 131 3 134 3 1 1 22 40 -8.553 -0.014 -7.207 -2.604 -2.416 -3.376 1.829 D 133 131 3 134 3 0 0 21 39 -8.110 -0.287 -2.501 IL 134 134 3 134 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 30 - A - - - ML 135 134 3 137 3 1 1 20 39 -8.820 -0.011 -7.474 1.290 -1.655 -1.772 -0.084 D 136 134 3 137 3 0 0 20 39 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 31 - C - - - ML 138 137 3 140 3 1 1 19 38 -8.820 -0.011 -7.474 -0.277 1.324 -2.380 -1.064 D 139 137 3 140 3 0 0 19 38 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 32 - U - - - ML 141 140 3 143 3 1 1 18 37 -8.820 -0.011 -7.474 -3.083 -2.826 -3.864 1.877 D 142 140 3 143 3 0 0 18 37 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 33 - C - - - ML 144 143 3 146 3 1 1 17 35 -8.820 -0.011 -7.474 -1.808 1.317 -2.731 0.101 D 145 143 3 146 3 0 0 17 35 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 34 - c - - - ML 147 146 3 149 3 1 1 16 34 -8.820 -0.011 -7.474 0.049 0.610 -1.616 0.154 D 148 146 3 149 3 0 0 16 34 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 35 - G - - - ML 150 149 3 152 3 1 1 14 33 -8.820 -0.011 -7.474 -0.153 -2.684 1.445 -2.168 D 151 149 3 152 3 0 0 15 33 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 36 - U - - - ML 153 152 3 155 3 1 1 12 31 -8.820 -0.011 -7.474 -0.250 -1.572 -2.018 1.365 D 154 152 3 155 3 0 0 13 32 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 37 - u - - - ML 156 155 3 158 2 1 1 1 1 * 0.000 -0.031 -0.165 0.038 0.142 D 157 155 3 158 2 0 0 0 0 * 0.000 IL 158 158 3 158 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 42 ] - - - - - - E 159 158 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME DicF ACC RF00039 DESC DicF RNA LENG 52 MAXL 127 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:11:56 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 5 EFFN 4.536133 CKSUM 1458131470 STATS LOCAL MSV -7.3620 0.72304 STATS LOCAL VITERBI -8.4733 0.72304 STATS LOCAL FORWARD -3.4051 0.72304 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.85378 1.40430 1.39770 1.04795 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 0.00000 * 1 3.40050 3.23911 3.93961 0.09652 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 2 2.13326 2.39545 1.65359 0.51240 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 3 2.37118 0.88180 2.96569 0.81856 3 u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 4 1.97293 2.38525 0.99266 0.92056 4 u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 5 1.97476 2.39275 0.96732 0.94231 5 u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 6 3.49200 4.45692 0.06215 4.00548 6 G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 7 3.40050 3.23911 3.93961 0.09652 7 U - - : 1.38629 1.38629 1.38629 1.38629 0.20911 4.27667 1.74407 1.46634 0.26236 1.09861 0.40547 8 1.13566 2.79213 0.64039 2.40336 8 G - - : 1.38629 1.38629 1.38629 1.38629 0.03367 4.10122 4.10122 1.46634 0.26236 0.14748 1.98693 9 0.77941 2.92215 0.89283 2.55093 9 a - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 10 2.37118 0.88180 2.96569 0.81856 10 u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 11 0.96704 1.66102 1.29787 1.85319 11 a - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 12 2.48519 1.45750 3.03238 0.45307 12 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 13 3.40050 3.23911 3.93961 0.09652 13 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 14 3.40050 3.23911 3.93961 0.09652 14 U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 15 3.13932 4.04278 0.08263 3.99293 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 16 3.13684 4.03897 0.08292 3.98774 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 17 3.14619 0.46169 2.92918 1.29709 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 18 3.13311 4.03326 0.08336 3.98001 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 19 3.13173 4.03115 0.08353 3.97715 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 20 3.01560 0.92694 2.95770 0.68660 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 21 0.13808 3.70809 2.57913 3.55403 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 22 3.40050 3.23911 3.93961 0.09652 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 23 4.08885 0.09938 3.95445 2.83575 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 24 0.19968 3.29763 2.29124 3.14906 24 A - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 25 3.03947 3.89320 0.09511 3.79474 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 26 2.44766 1.70494 2.29823 0.46000 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.20911 4.27667 1.74407 1.46634 0.26236 1.09861 0.40547 27 3.07049 2.95867 3.60258 0.13415 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03367 4.10122 4.10122 1.46634 0.26236 2.68007 0.07102 28 3.07049 2.95867 3.60258 0.13415 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03367 4.10122 4.10122 1.46634 0.26236 2.68007 0.07102 29 3.07049 2.95867 3.60258 0.13415 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03367 4.10122 4.10122 1.46634 0.26236 0.14748 1.98693 30 0.51010 2.47422 2.55197 1.43797 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 31 1.56285 0.49493 2.94259 2.05479 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 32 3.40050 3.23911 3.93961 0.09652 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 33 2.55562 0.49319 3.18658 1.30796 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 34 1.34730 0.98316 2.45853 1.27163 34 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 35 1.48365 3.16374 0.40042 2.79879 35 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 36 1.54760 2.40945 2.71333 0.46035 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 37 1.39899 1.50603 1.36952 1.28324 37 u - - _ 1.38629 1.38629 1.38629 1.38629 0.23641 1.62631 4.27667 1.11781 0.39600 1.09861 0.40547 38 0.92149 2.47682 1.22612 1.49327 41 a - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 39 4.13033 0.10119 3.89207 2.81740 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.20911 4.27667 1.74407 1.46634 0.26236 1.09861 0.40547 40 3.52468 2.63097 3.20231 0.15331 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.03367 4.10122 4.10122 1.46634 0.26236 0.14748 1.98693 41 3.12902 4.13399 0.08378 3.88319 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 42 0.84952 1.03223 2.57559 1.96567 45 a - - - 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 43 3.40050 3.23911 3.93961 0.09652 46 U - - - 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 44 1.86815 1.01612 1.59528 1.27031 47 c - - - 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 45 3.89811 2.99082 3.62486 0.10223 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.23641 4.27667 1.62631 1.46634 0.26236 1.09861 0.40547 46 2.23164 3.12760 0.23001 2.91328 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.03458 4.07484 4.07484 1.46634 0.26236 0.13213 2.08933 47 4.12685 0.10134 3.89030 2.81677 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 48 4.13340 0.10107 3.89364 2.81796 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 49 1.42036 3.09587 0.41813 2.90297 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 50 4.15536 0.10017 3.90478 2.82190 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 51 4.17476 0.09940 3.91451 2.82533 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 52 2.61349 0.44348 3.24617 1.40243 55 C - - : 1.38629 1.38629 1.38629 1.38629 0.01418 4.26268 * 1.46634 0.26236 0.00000 * //