Browse all 3016 Rfam families

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0 - 9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Original order ID Accession Type Seed Full Description
0 23S-methyl RF01065 Cis-reg; 19 190 23S methyl RNA motif
1 30_255 RF02857 Gene; sRNA; 2 1 Leptospira sRNA 30_255
2 30_292 RF02856 Gene; sRNA; 3 6 Leptospira sRNA 30_292
3 5S_rRNA RF00001 Gene; rRNA; 712 139,932 5S ribosomal RNA
4 5_8S_rRNA RF00002 Gene; rRNA; 61 4,716 5.8S ribosomal RNA
5 5_ureB_sRNA RF02514 Gene; sRNA; 13 2,642 5' ureB small RNA
6 6A RF02925 Gene; sRNA; 273 20 6A RNA
7 6C RF01066 Cis-reg; 18 394 6C RNA
8 6S RF00013 Gene; 149 3,576 6S / SsrS RNA
9 6S-Flavo RF01685 Gene; sRNA; 82 148 6S-Flavo RNA
10 7SK RF00100 Gene; 45 15,232 7SK RNA
11 AAC_AAD_leader RF02912 Cis-reg; riboswitch; 4 25 AAC AAD 5' leader riboswitch
12 AaHKsRNA20 RF02898 Gene; sRNA; 6 26 Aggregatibacter sRNA 20
13 AaHKsRNA22 RF02902 Gene; sRNA; 7 132 Aggregatibacter sRNA 22
14 AaHKsRNA41 RF02901 Gene; sRNA; 2 5 Aggregatibacter sRNA 41
15 AaHKsRNA54 RF02899 Gene; sRNA; 6 18 Aggregatibacter sRNA 54
16 AaHKsRNA69 RF02904 Gene; sRNA; 3 12 Aggregatibacter sRNA 69
17 AaHKsRNA82 RF02900 Gene; sRNA; 4 10 Aggregatibacter sRNA 82
18 AaHKsRNA96 RF02903 Gene; antisense; 3 11 Aggregatibacter sRNA 96
19 Aar RF02375 Gene; sRNA; 13 30 Aar sRNA
20 abiF RF03085 Gene; sRNA; 126 186 abiF RNA
21 AbsR11 RF02608 Gene; sRNA; 2 26 Acinetobacter sRNA 11
22 AbsR25 RF02607 Gene; sRNA; 2 1 Acinetobacter sRNA 25
23 AbsR28 RF02606 Gene; sRNA; 2 13 Acinetobacter sRNA 28
24 ACA59 RF01293 Gene; snRNA; snoRNA; HACA-box; 3 16 Small nucleolar RNA ACA59
25 ACA64 RF01225 Gene; snRNA; snoRNA; HACA-box; 30 224 Small nucleolar RNA ACA64
26 ACAT RF01495 Cis-reg; 8 30 Human acetyl-coA cholesterol acyltransferase mRNA
27 ACEA_U3 RF01848 Gene; snRNA; snoRNA; CD-box; 28 123 ACEA small nucleolar RNA U3
28 Acido-1 RF01686 Gene; sRNA; 4 4 Acido-1 RNA
29 Acido-Lenti-1 RF01687 Gene; sRNA; 87 1,891 Acido-Lenti-1 RNA
30 Actino-pnp RF01688 Cis-reg; 77 654 Actino-pnp RNA
31 Actino-ugpB RF02927 Gene; sRNA; 12 3 Actino-ugpB RNA
32 Actinomyces-1 RF02928 Gene; sRNA; 236 49 Actinomyces-1 RNA
33 adapt33_1 RF02255 Gene; lncRNA; 3 7 Adaptive response 33 conserved region 1
34 adapt33_2 RF02256 Gene; lncRNA; 2 4 Adaptive response 33 conserved region 2
35 adapt33_3 RF02257 Gene; lncRNA; 3 6 Adaptive response 33 conserved region 3
36 adapt33_4 RF02258 Gene; lncRNA; 2 5 Adaptive response 33 conserved region 4
37 AdoCbl-variant RF01689 Cis-reg; riboswitch; 144 67 AdoCbl variant RNA
38 AdoCbl_riboswitch RF01482 Cis-reg; riboswitch; 7 174 AdoCbl riboswitch
39 AEV_CRE RF02536 Cis-reg; 2 1 Avian encephalitis virus (AEV) cis-acting replication element (CRE)
40 AfaR RF02515 Gene; sRNA; 2 0 AfaR small RNA
41 Afu_182 RF01496 Gene; sRNA; 19 280 A. fumigatus sRNA Afu_182
42 Afu_190 RF01498 Gene; snRNA; snoRNA; CD-box; 3 273 A. fumigatus snoRNA Afu_190
43 Afu_191 RF01499 Gene; snRNA; snoRNA; CD-box; 7 86 A. fumigatus snoRNA Afu_191
44 Afu_198 RF01500 Gene; snRNA; snoRNA; CD-box; 6 117 A. fumigatus snoRNA Afu_198
45 Afu_199 RF01501 Gene; snRNA; snoRNA; CD-box; 3 98 A. fimigatus snoRNA Afu_199
46 Afu_203 RF01503 Gene; sRNA; 3 8 A. fumigatus sRNA Afu_203
47 Afu_254 RF01504 Gene; sRNA; 6 105 A. fumigatus sRNA Afu_254
48 Afu_263 RF02402 Gene; snRNA; snoRNA; CD-box; 19 90 A. fumigatus snoRNA Afu_263
49 Afu_264 RF01505 Gene; snRNA; snoRNA; CD-box; 5 247 A. fumigatus snoRNA Afu_264
50 Afu_294 RF01506 Gene; snRNA; snoRNA; CD-box; 10 181 A. fumigatus snoRNA Afu_294
51 Afu_298 RF01507 Gene; snRNA; snoRNA; CD-box; 3 163 A. fimigatus snoRNA Afu_298
52 Afu_300 RF01509 Gene; snRNA; snoRNA; CD-box; 10 260 A. fumigatus snoRNA Afu_300
53 Afu_304 RF01511 Gene; snRNA; snoRNA; CD-box; 5 255 A. fumigatus snoRNA Afu_304
54 Afu_309 RF01512 Gene; sRNA; 10 273 A. fumigatus sRNA Afu_309
55 Afu_328 RF02403 Gene; snRNA; snoRNA; CD-box; 4 14 A. fumigatus snoRNA Afu_328
56 Afu_335 RF01513 Gene; snRNA; snoRNA; CD-box; 5 281 A. fumigatus snoRNA Afu_335
57 Afu_455 RF01860 Gene; snRNA; snoRNA; CD-box; 6 273 A. fumigatus snoRNA Afu_455
58 Afu_513 RF01514 Gene; snRNA; snoRNA; CD-box; 7 277 A. fumigatus snoRNA Afu_513
59 Afu_514 RF01515 Gene; snRNA; snoRNA; CD-box; 5 268 A. fumigatus snoRNA Afu_514
60 AgrB RF02891 Gene; antisense; 4 22 ArsR-gov region gene B
61 AgvB RF02702 Gene; sRNA; 3 3 Anti GcvB sRNA
62 AHBV_epsilon RF01313 Cis-reg; 10 4 Avian HBV RNA encapsidation signal epsilon
63 AilA_thermometer RF02772 Cis-reg; thermoregulator; 5 1 AilA 5' UTR thermometer
64 Alfamo_CPB RF00252 Cis-reg; 18 4 Alfalfa mosaic virus coat protein binding (CPB) RNA
65 algC RF02929 Cis-reg; 492 21 algC RNA
66 ALIL RF01497 Cis-reg; 26 1,389 ALIL pseudoknot
67 Alpha_RBS RF00140 Cis-reg; 39 523 Alpha operon ribosome binding site
68 alpha_tmRNA RF01849 Gene; 111 831 Alphaproteobacteria transfer-messenger RNA
69 AMV_RNA1_SL RF00196 Cis-reg; 6 1 Alfalfa mosaic virus RNA 1 5' UTR stem-loop
70 AniS RF02274 Gene; 5 9 AniS
71 Anti-Q_RNA RF00388 Gene; antisense; 6 6 Anti-Q RNA
72 Antizyme_FSE RF00381 Cis-reg; frameshift_element; 13 280 Antizyme RNA frameshifting stimulation element
73 ApoB_5_CRE RF00463 Cis-reg; 5 9 Apolipoprotein B (apoB) 5' UTR cis-regulatory element
74 ar14 RF02344 Gene; sRNA; 118 649 Alphaproteobacterial ar14
75 ar15 RF02345 Gene; sRNA; 61 241 Alphaproteobacterial ar15
76 ar35 RF02346 Gene; sRNA; 13 181 Alphaproteobacterial sRNA ar35
77 ar45 RF02347 Gene; sRNA; 36 211 Alphaproteobacterial sRNA ar45
78 ar7 RF02342 Gene; sRNA; 29 101 Alphaproteobacterial sRNA ar7
79 ar9 RF02343 Gene; sRNA; 28 123 Alphaproteobacterial sRNA ar9
80 Archaea_SRP RF01857 Gene; 53 291 Archaeal signal recognition particle RNA
81 ArcZ RF00081 Gene; sRNA; 9 61 ArcZ RNA
82 Arrc08 RF02858 Gene; sRNA; 3 5 Actinobacillus sRNA 08
83 Arrc11 RF02859 Gene; sRNA; 2 7 Actinobacillus sRNA 11
84 Arrc14 RF02860 Gene; sRNA; 4 10 Actinobacillus sRNA 14
85 ARRPOF RF02933 Gene; sRNA; 35 1 ARRPOF RNA
86 Arthropod_7SK RF01052 Gene; 19 102 Arthropod 7SK RNA
87 AS-pc01 RF02875 Gene; antisense; 3 8 Antisense to pHK01_035
88 AS-pc02 RF02876 Gene; antisense; 4 4 Antisense to pHK01_099
89 AS-traG RF02874 Gene; antisense; 4 13 Antisense to traG
90 AS-traI RF02873 Gene; antisense; 3 5 Antisense to traI
91 AS1726 RF01779 Gene; 2 1 AS1726 sRNA
92 AS1890 RF01780 Gene; 2 13 AS1890 sRNA
93 asd RF01732 Gene; sRNA; 31 55 MarS sRNA
94 AsdA RF02674 Gene; antisense; 4 208 antisense RNA of dnaA mRNA
95 ASdes RF01781 Gene; sRNA; 26 729 ASdes TB sRNA
96 ASpks RF01782 Gene; antisense; 77 4,571 ASpks TB sRNA
97 asponA RF02812 Gene; antisense; 3 73 anti ponA RNA
98 aspS RF02930 Cis-reg; 58 24 aspS RNA
99 asR3 RF02793 Gene; antisense; 3 4 Pyrobaculum asRNA3
100 AsrC RF02746 Gene; antisense; 7 61 antisense RNA of rseC mRNA
101 astro_FSE RF01833 Cis-reg; frameshift_element; 4 1 ribosomal frameshift site
102 asX1 RF02235 Gene; sRNA; 15 49 Xanthomonadaceae sRNA asX1
103 asX2 RF02236 Gene; sRNA; 2 0 Xanthomonas sRNA asX2
104 asX3 RF02237 Gene; sRNA; 4 1 Xanthomonas sRNA asX3
105 asX4 RF02238 Gene; sRNA; 8 3 Xanthomonas sRNA asX4/Xoo4
106 asX6 RF02239 Gene; sRNA; 3 0 Xanthomonas sRNA asX6
107 AsxR RF02703 Gene; sRNA; 2 9 Anti stx2 sRNA
108 atoC RF01733 Cis-reg; 8 18 atoC RNA
109 atpB RF02916 Cis-reg; 72 88 atpB RNA
110 ATPC RF01067 Gene; 90 15 ATPC RNA motif
111 Atu_At1 RF02496 Gene; sRNA; 33 135 Rhizobiales sRNA Atu_At1
112 Atu_C10 RF02497 Gene; sRNA; 2 4 Rhizobiales sRNA Atu_C10
113 Atu_C3 RF02498 Gene; sRNA; 2 2 Rhizobiales sRNA Atu_C3
114 Atu_C4 RF02499 Gene; sRNA; 2 2 Rhizobiales sRNA Atu_C4
115 Atu_C6 RF02500 Gene; sRNA; 32 180 EcpR1
116 Atu_C7 RF02501 Gene; sRNA; 3 47 Rhizobiales sRNA Atu_C7
117 Atu_C8 RF02502 Gene; sRNA; 27 167 Rhizobiales sRNA Atu_C8
118 Atu_C9 RF02503 Gene; sRNA; 9 66 Rhizobiales sRNA Atu_C9
119 Atu_L1 RF02504 Gene; sRNA; 4 11 Rhizobiales sRNA Atu_L1
120 Atu_L6 RF02505 Gene; sRNA; 3 3 Rhizobiales sRNA Atu_L6
121 Atu_Ti1 RF02506 Gene; sRNA; 14 45 Rhizobiales sRNA Atu_Ti1
122 Atu_Ti3 RF02507 Gene; sRNA; 4 12 Rhizobiales sRNA Atu_Ti3
123 Atu_Ti4 RF02508 Gene; sRNA; 3 1 Rhizobiales sRNA Atu_Ti4
124 Avalong_thermometer RF02698 Cis-reg; thermoregulator; 2 0 Avalong 5' UTR thermometer
125 Avashort_thermometer RF02699 Cis-reg; thermoregulator; 2 0 Avashort 5' UTR thermometer
126 b55 RF01783 Gene; sRNA; 2 1 Mycobacterium B11
127 bablM RF01784 Gene; sRNA; 12 10 bablM sRNA
128 babR_5UTR RF02572 Cis-reg; 3 1 Brucella babR 5'UTR
129 Bacillaceae-1 RF01690 Gene; sRNA; 95 2,235 Bacillaceae-1 RNA
130 Bacilli-1 RF02931 Gene; sRNA; 145 8 Bacilli-1 RNA
131 Bacillus-plasmid RF01691 Gene; sRNA; 31 96 Bacillus-plasmid RNA
132 Bacteria_large_SRP RF01854 Gene; 92 1,051 Bacterial large signal recognition particle RNA
133 Bacteria_small_SRP RF00169 Gene; 261 4,947 Bacterial small signal recognition particle RNA
134 Bacteroid-trp RF01692 Cis-reg; leader; 35 180 Bacteroidete tryptophan peptide leader RNA
135 Bacteroidales-1 RF01693 Gene; sRNA; 41 158 Bacteroidales-1 RNA
136 Bacteroidales-2 RF02943 Gene; sRNA; 43 3 Bacteroidales-2 RNA
137 Bacteroides-1 RF01694 Gene; sRNA; 40 41 Bacteroides-1 RNA
138 Baculoviridae_NAE RF02911 Cis-reg; 6 24 Baculoviridae Nucleocapsid Assembly essential Element
139 BaMV_CRE RF00290 Cis-reg; 5 1 Bamboo mosaic potexvirus (BaMV) cis-regulatory element
140 bantam RF00727 Gene; miRNA; 11 74 microRNA bantam
141 BASRCI153 RF02604 Gene; sRNA; 2 2 Brucella sRNA CI153
142 BASRCI27 RF02600 Gene; sRNA; 3 23 Brucella sRNA CI27
143 BASRCI337 RF02601 Gene; sRNA; 4 1 Brucella sRNA CI337
144 BASRCI408 RF02599 Gene; sRNA; 3 1 Brucella sRNA CI408
145 BASRCI414 RF02602 Gene; sRNA; 3 1 Brucella sRNA CI414
146 BASRCII26 RF02603 Gene; sRNA; 2 1 Brucella sRNA CII26
147 Bcj11 RF02835 Gene; sRNA; 4 152 Burkholderia RNA 11
148 Bcj14 RF02836 Gene; sRNA; 3 91 Burkholderia RNA 14
149 Bcj7 RF02837 Gene; sRNA; 3 46 Burkholderia RNA 7 (anti-hemB)
150 BcKCsr2 RF02883 Gene; sRNA; 5 46 Burkholderia sRNA 2
151 BcKCsr7 RF02884 Gene; sRNA; 5 51 Burkholderia sRNA 7
152 Betaproteobacteria-1 RF02932 Gene; sRNA; 102 27 Betaproteobacteria-1 RNA
153 Betaproteobacteria_toxic_sRNA RF02278 Gene; sRNA; 51 579 Betaproteobacteria toxic small RNA
154 beta_tmRNA RF01850 Gene; 7 34 Betaproteobacteria transfer-messenger RNA
155 bicoid_3 RF00551 Cis-reg; 15 10 Bicoid 3'-UTR regulatory element
156 BjrC1505 RF02356 Gene; sRNA; 25 165 Alphaproteobacterial sRNA BjrC1505
157 BjrC174 RF02355 Gene; sRNA; 15 59 Bradyrhizobiaceae sRNA BjrC174
158 BjrC68 RF02353 Gene; sRNA; 12 38 Bradyrhizobiaceae sRNA BjrC68
159 BjrC80 RF02354 Gene; sRNA; 15 29 Bradyrhizobiaceae sRNA BjrC80
160 BLi_r0872 RF02662 Gene; antisense; 2 2 Bacillus asRNA 0872
161 blv_FSE RF01785 Cis-reg; frameshift_element; 2 2 ribosomal frameshift site
162 BLV_package RF00192 Cis-reg; 5 1 Bovine leukaemia virus RNA packaging signal
163 BM-sr0117 RF02570 Gene; sRNA; 3 1 Brucella melitensis small RNA 0117
164 BMV3_UPD-PK1 RF01108 Cis-reg; 2 1 Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR
165 BMV3_UPD-PK3 RF01113 Cis-reg; 2 2 Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR
166 Bp1_162 RF02420 Gene; sRNA; 11 54 Burkholderia sRNA Bp1_Cand612_SIPHT
167 Bp1_684 RF02421 Gene; sRNA; 14 158 Burkholderia sRNA Bp1_Cand684_SIPHT
168 Bp1_738 RF02422 Gene; sRNA; 21 54 Burkholderia sRNA Bp1_Cand738_SIPHT
169 Bp1_781 RF02423 Gene; sRNA; 15 59 Burkholderia sRNA Bp1_Cand871_SIPHT
170 Bp2_287 RF02424 Gene; sRNA; 14 39 Burkholderia sRNA Bp2_Cand287_SIPHT
171 BSnc115 RF02619 Gene; sRNA; 3 1 Brucella sRNA 115
172 BSnc119 RF02620 Gene; sRNA; 3 1 Brucella sRNA 119
173 BSnc120 RF02621 Gene; sRNA; 3 1 Brucella sRNA 120
174 BSnc121 RF02622 Gene; sRNA; 2 1 Brucella sRNA 121
175 BSnc140 RF02623 Gene; sRNA; 2 1 Brucella sRNA 140
176 BSnc150 RF02624 Gene; sRNA; 2 1 Brucella sRNA 150
177 BSR0441 RF02655 Gene; sRNA; 5 1 Brucella BSR0441 sRNA
178 BSR0602 RF02609 Gene; sRNA; 2 1 Brucella sRNA 0602
179 BSR0626 RF02615 Gene; sRNA; 2 1 Brucella sRNA 0626
180 BSR0653 RF02611 Gene; sRNA; 4 1 Brucella sRNA 0653
181 BSR0709 RF02610 Gene; sRNA; 4 1 Brucella sRNA 0709
182 BSR0739 RF02613 Gene; sRNA; 4 1 Brucella sRNA 0739
183 BSR1073 RF02614 Gene; sRNA; 2 1 Brucella sRNA 1073
184 BSR1350 RF02612 Gene; sRNA; 3 1 Brucella sRNA 1350
185 BsrC RF01410 Gene; sRNA; 29 324 BsrC
186 BsrF RF01411 Gene; sRNA; 11 112 BsrF
187 BsrG RF01412 Gene; sRNA; 6 295 BsrG
188 BTE RF00434 Cis-reg; 17 11 Luteovirus cap-independent translation element (BTE)
189 BTH_s1 RF02690 Gene; sRNA; 5 12 Burkholderia sRNA 1
190 BTH_s19 RF02691 Gene; sRNA; 7 11 Burkholderia sRNA 19
191 BTH_s39 RF02692 Gene; sRNA; 7 56 Burkholderia sRNA 39
192 BtsR1 RF02888 Gene; sRNA; 3 5 Bacillus sRNA 1
193 Burkholderiales-2 RF02917 Cis-reg; 19 8 Burkholderiales-2 RNA
194 bxd_1 RF01929 Gene; lncRNA; 6 7 Bithoraxoid conserved region 1
195 bxd_2 RF01930 Gene; lncRNA; 5 6 Bithoraxoid conserved region 2
196 bxd_3 RF01931 Gene; lncRNA; 4 10 Bithoraxoid conserved region 3
197 bxd_4 RF01932 Gene; lncRNA; 5 11 Bithoraxoid conserved region 4
198 bxd_5 RF01933 Gene; lncRNA; 5 11 Bithoraxoid conserved region 5
199 bxd_6 RF01934 Gene; lncRNA; 6 11 Bithoraxoid conserved region 6
200 bxd_7 RF01935 Gene; lncRNA; 3 4 Bithoraxoid conserved region 7
201 BYDV_5_UTR RF01508 Cis-reg; 4 4 Barley yellow dwarf virus 5'UTR
202 B_rapa_snoR775 RF02705 Gene; snRNA; snoRNA; HACA-box; 2 20 Brassica rapa small nucleolar RNA 775
203 c-di-GMP-I RF01051 Cis-reg; 155 4,593 Cyclic di-GMP-I riboswitch
204 c-di-GMP-II RF01786 Cis-reg; riboswitch; 54 606 Cyclic di-GMP-II riboswitch
205 C0299 RF00119 Gene; sRNA; 5 2 C0299 RNA
206 C0465 RF00116 Gene; sRNA; 8 1 C0465 RNA
207 C0719 RF00117 Gene; sRNA; 9 1 C0719 RNA
208 C1_109596F_thermometer RF02762 Cis-reg; thermoregulator; 2 2 C1_109596F 5' UTR thermometer
209 C4 RF01695 Gene; antisense; 456 1,796 C4 antisense RNA
210 c4-2 RF02944 Gene; sRNA; 224 72 c4-2 RNA
211 CAESAR RF00172 Cis-reg; 9 89 ctgf/hcs24 CAESAR
212 caiA RF02934 Gene; sRNA; 14 4 caiA RNA
213 Cardiovirus_CRE RF00453 Cis-reg; 4 1 Cardiovirus cis-acting replication element (CRE)
214 CbSR1 RF02557 Gene; sRNA; 2 1 Coxiella burnetii sRNA 1
215 CbSR12 RF02561 Gene; sRNA; 2 1 Coxiella burnetii sRNA 12
216 CbSR14 RF02562 Gene; sRNA; 2 1 Coxiella burnetii sRNA 14
217 CbSR2 RF02558 Gene; antisense; 2 1 Coxiella burnetii sRNA 2
218 CbSR3 RF02563 Gene; antisense; 2 19 Coxiella burnetii sRNA 3
219 CbSR4 RF02559 Gene; antisense; 2 1 Coxiella burnetii sRNA 4
220 CbSR9 RF02560 Gene; antisense; 2 1 Coxiella burnetii sRNA 9
221 CC0196 RF01519 Gene; sRNA; 2 14 Caulobacter sRNA CC0196
222 CC0734 RF01520 Gene; sRNA; 2 6 caulobacter sRNA CC0734
223 CC1840 RF01521 Gene; sRNA; 3 10 caulobacter sRNA CC1840
224 CC2171 RF01867 Gene; sRNA; 13 96 caulobacter sRNA CC2171
225 CC3513 RF01528 Gene; sRNA; 2 9 caulobacter sRNA CC3513
226 CC3552 RF01529 Gene; sRNA; 2 26 Cauldobacter sRNA CC3552
227 CC3664 RF01530 Gene; sRNA; 2 14 Caulobacter sRNA CC3664
228 CcsR1 RF02791 Gene; sRNA; 2 8 Conserved CCUCCUCCC motif stress-induced RNA 1
229 CDKN2B-AS RF01909 Gene; lncRNA; 25 36 CDKN2B antisense RNA 1 intronic convserved region
230 CDKN2B-AS_2 RF02044 Gene; lncRNA; 6 17 CDKN2B antisense RNA 1 convserved region 2
231 CDKN2B-AS_3 RF02045 Gene; lncRNA; 18 30 CDKN2B antisense RNA 1 convserved region 3
232 ceN100 RF01607 Gene; snRNA; snoRNA; HACA-box; 4 15 C. elegans snoRNA ceN100
233 ceN101 RF01664 Gene; snRNA; snoRNA; HACA-box; 4 13 Caenorhabditis snoRNA ceN101
234 ceN102 RF01608 Gene; snRNA; snoRNA; HACA-box; 4 8 Caenorhabditis snoRNA ceN80
235 ceN103 RF01609 Gene; snRNA; snoRNA; CD-box; 4 7 Caenorhabditis snoRNA ceN103
236 ceN104 RF01610 Gene; snRNA; snoRNA; HACA-box; 5 14 Caenorhabditis snoRNA ceN104
237 ceN105 RF01612 Gene; snRNA; snoRNA; HACA-box; 3 7 Nematode snoRNA ceN105
238 ceN106 RF01526 Gene; snRNA; snoRNA; CD-box; 3 6 C. elegans snoRNA ceN106
239 ceN108 RF01611 Gene; snRNA; snoRNA; CD-box; 3 14 Caenorhabditis snoRNA ceN108
240 ceN109 RF01613 Gene; snRNA; snoRNA; CD-box; 3 17 Nematode snoRNA ceN109
241 ceN110 RF01614 Gene; snRNA; snoRNA; HACA-box; 3 7 Caenorhabditis snoRNA ceN110
242 ceN111 RF01615 Gene; snRNA; snoRNA; CD-box; 3 29 Nematode snoRNA ceN111
243 ceN113 RF01617 Gene; snRNA; snoRNA; CD-box; 2 6 Caenorhabditis snoRNA ceN113
244 ceN114 RF01618 Gene; snRNA; snoRNA; CD-box; 3 17 Nematode snoRNA ceN114
245 ceN115 RF01619 Gene; sRNA; 2 6 C. elegans sRNA ceN115
246 ceN125 RF01620 Gene; snRNA; snoRNA; HACA-box; 4 10 Nematode snoRNA ceN125
247 ceN126 RF01621 Gene; snRNA; snoRNA; HACA-box; 3 7 Caenorhabditis snoRNA ceN126
248 ceN22 RF01622 Gene; snRNA; snoRNA; CD-box; 2 17 Nematode snoRNA ceN22
249 ceN23-1 RF01623 Gene; sRNA; 3 14 Caenorhabditis sRNA ceN23-1
250 ceN27 RF01624 Gene; snRNA; snoRNA; CD-box; 2 9 Nematode snoRNA ceN27
251 ceN28 RF01625 Gene; snRNA; snoRNA; CD-box; 4 7 Caenorhabditis snoRNA ceN28
252 ceN30 RF01626 Gene; snRNA; snoRNA; CD-box; 4 7 Caenorhabditis snoRNA ceN30
253 ceN33 RF01866 Gene; snRNA; snoRNA; CD-box; 5 7 C. elegans snoRNA ceN33
254 ceN36-1 RF01627 Gene; snRNA; snoRNA; HACA-box; 5 15 Nematode snoRNA ceN36-1
255 ceN38 RF01628 Gene; snRNA; snoRNA; HACA-box; 3 5 Caenorhabditis snoRNA ceN38
256 ceN39 RF01629 Gene; snRNA; snoRNA; HACA-box; 4 56 Nematode snoRNA ceN39
257 ceN40 RF01630 Gene; snRNA; snoRNA; CD-box; 4 22 Nematode snoRNA ceN40
258 ceN41 RF01631 Gene; snRNA; snoRNA; HACA-box; 3 8 Caenorhabditis snoRNA ceN41
259 ceN42 RF01632 Gene; snRNA; snoRNA; HACA-box; 3 6 Caenorhabditis snoRNA ceN42
260 ceN43 RF01633 Gene; snRNA; snoRNA; HACA-box; 4 6 Caenorhabditis snoRNA ceN43
261 ceN44 RF01634 Gene; snRNA; snoRNA; CD-box; 3 6 Caenorhabditis snoRNA ceN44
262 ceN45 RF01635 Gene; snRNA; snoRNA; HACA-box; 4 10 Caenorhabditis snoRNA ceN45
263 ceN46 RF01636 Gene; snRNA; snoRNA; HACA-box; 3 7 Caenorhabditis snoRNA ceN46
264 ceN47 RF01637 Gene; snRNA; snoRNA; CD-box; 6 36 Nematode snoRNA ceN47
265 ceN48 RF01638 Gene; snRNA; snoRNA; HACA-box; 5 7 Caenorhabditis snoRNA ceN48
266 ceN49 RF01639 Gene; snRNA; snoRNA; HACA-box; 3 8 Caenorhabditis snoRNA ceN49
267 ceN51 RF01640 Gene; snRNA; snoRNA; HACA-box; 3 6 Caenorhabditis snoRNA ceN51
268 ceN53 RF01641 Gene; snRNA; snoRNA; CD-box; 3 7 Caenorhabditis snoRNA ceN53
269 ceN54 RF01642 Gene; snRNA; snoRNA; CD-box; 3 9 Caenorhabditis snoRNA ceN54
270 ceN56 RF01643 Gene; sRNA; 4 6 Caenorhabditis sRNA ceN56
271 ceN58 RF01645 Gene; snRNA; snoRNA; HACA-box; 3 14 Nematode snoRNA ceN58
272 ceN59 RF01644 Gene; snRNA; snoRNA; HACA-box; 3 11 Caenorhabditis snoRNA ceN59
273 ceN61 RF01647 Gene; snRNA; snoRNA; CD-box; 4 7 Caenorhabditis snoRNA ceN61
274 ceN63 RF01646 Gene; snRNA; snoRNA; CD-box; 3 7 Caenorhabditis snoRNA ceN63
275 ceN65 RF01648 Gene; snRNA; snoRNA; CD-box; 3 6 Caenorhabditis snoRNA ceN65
276 ceN67 RF01649 Gene; snRNA; snoRNA; HACA-box; 3 6 Caenorhabditis snoRNA ceN67
277 ceN68 RF01650 Gene; snRNA; snoRNA; HACA-box; 2 1 Caenorhabditis snoRNA ceN48
278 ceN69 RF01651 Gene; snRNA; snoRNA; CD-box; 4 7 Caenorhabditis snoRNA ceN69
279 ceN70 RF01652 Gene; snRNA; snoRNA; CD-box; 3 12 Caenorhabditis snoRNA ceN70
280 ceN72-3_ceN74-2 RF01656 Gene; sRNA; 13 265 Nematode sRNA ceN72-3_ceN74-2
281 ceN80 RF01653 Gene; snRNA; snoRNA; HACA-box; 5 13 Caenorhabditis snoRNA ceN80
282 ceN81 RF01658 Gene; snRNA; snoRNA; HACA-box; 3 7 Caenorhabditis snoRNA ceN81
283 ceN82 RF01654 Gene; snRNA; snoRNA; HACA-box; 6 13 Caenorhabditis snoRNA ceN82
284 ceN84 RF01655 Gene; snRNA; snoRNA; HACA-box; 5 13 Caenorhabditis snoRNA ceN84
285 ceN86 RF01659 Gene; snRNA; snoRNA; CD-box; 2 5 Caenorhabditis snoRNA ceN86
286 ceN88 RF01660 Gene; snRNA; snoRNA; HACA-box; 6 54 Nematode snoRNA ceN88
287 ceN89 RF01662 Gene; snRNA; snoRNA; CD-box; 4 7 Caenorhabditis snoRNA ceN89
288 ceN92 RF01661 Gene; snRNA; snoRNA; HACA-box; 4 13 Caenorhabditis snoRNA ceN92
289 ceN93 RF01663 Gene; sRNA; 4 6 Caenorhabditis sRNA ceN93
290 Cgb105 RF02734 Gene; sRNA; 2 1 Corynebacterium sRNA 105
291 che1 RF02935 Gene; sRNA; 98 186 che1 RNA
292 Chlorobi-1 RF01696 Gene; sRNA; 15 20 Chlorobi-1 RNA
293 Chlorobi-RRM RF01697 Cis-reg; 18 20 Chlorobi-RRM RNA
294 Chloroflexi-1 RF01698 Gene; sRNA; 3 0 Chloroflexi-1 RNA
295 Chloroflexus-1 RF02936 Gene; sRNA; 4 1 Chloroflexus-1 RNA
296 cHP RF00617 Cis-reg; 59 2 flavivirus capsid hairpin cHP
297 chrB-a RF03078 Cis-reg; 163 244 chrB-a RNA
298 chrB-b RF03086 Cis-reg; 313 136 chrB-b RNA
299 ciona-mir-92 RF01117 Gene; miRNA; 2 2 Ciona microRNA mir-92
300 Cis2_sRNA RF02645 Gene; sRNA; 2 174 Ruegeria cis2 sRNA
301 Cis52_sRNA RF02647 Gene; sRNA; 2 147 Ruegeria cis52 sRNA
302 Cis8_sRNA RF02646 Gene; sRNA; 2 90 Ruegeria cis8 sRNA
303 Cis90_sRNA RF02648 Gene; sRNA; 2 17 Ruegeria cis90 sRNA
304 class_I_RNA RF01414 Gene; 21 30 Class I RNA
305 Clostridiales-1 RF01699 Gene; sRNA; 194 913 Clostridiales-1 RNA
306 Clostridiales-2 RF02937 Gene; sRNA; 44 110 Clostridiales-2 RNA
307 Clostridiales-3 RF02942 Gene; sRNA; 157 16 Clostridiales-3 RNA
308 Clostridium-PBP RF03091 Gene; sRNA; 11 0 Clostridium-PBP RNA
309 ClpQY_promoter RF02401 Cis-reg; 39 65 ClpQY promoter
310 CLRN1-AS1 RF02089 Gene; lncRNA; 19 34 CLRN1 antisense RNA 1 conserved region
311 CncR1 RF02650 Gene; sRNA; 3 1 Cag non-coding RNA1
312 CnfY_thermometer RF02771 Cis-reg; thermoregulator; 3 1 CnfY 5' UTR thermometer
313 Cobalamin RF00174 Cis-reg; riboswitch; 430 13,781 Cobalamin riboswitch
314 COG2827 RF02938 Gene; sRNA; 48 20 COG2827 RNA
315 COG2908 RF02939 Cis-reg; 9 0 COG2908 RNA
316 COG3610-DE RF03066 Gene; sRNA; 59 16 COG3610-DE RNA
317 COG3860 RF02940 Cis-reg; 42 122 COG3860 RNA
318 COG3943 RF02941 Gene; sRNA; 27 0 COG3943 RNA
319 cold-seep-1 RF03089 Gene; sRNA; 15 0 cold-seep-1 RNA
320 Collinsella-1 RF01700 Gene; sRNA; 6 12 Collinsella-1 RNA
321 CopA RF00042 Gene; antisense; 37 26 CopA-like RNA
322 Corio-PBP RF02945 Gene; sRNA; 14 16 Corio-PBP RNA
323 Coronavirus_5p_sl_1_2 RF02910 Cis-reg; 4 7 Coronavirus 5' stem-loops 1-2
324 Corona_FSE RF00507 Cis-reg; frameshift_element; 23 71 Coronavirus frameshifting stimulation element
325 Corona_package RF00182 Cis-reg; 3 11 Coronavirus packaging signal
326 Corona_pk3 RF00165 Cis-reg; 14 44 Coronavirus 3' UTR pseudoknot
327 Corona_SL-III RF00496 Cis-reg; 5 3 Coronavirus SL-III cis-acting replication element (CRE)
328 CoTC_ribozyme RF00621 Gene; ribozyme; 10 20 Beta-globin co-transcriptional cleavage ribozyme
329 cow-rumen-1 RF02946 Gene; sRNA; 50 0 cow-rumen-1 RNA
330 cow-rumen-2 RF02947 Gene; sRNA; 32 0 cow-rumen-2 RNA
331 cow-rumen-3 RF03083 Gene; sRNA; 8 0 cow-rumen-3 RNA
332 cow-rumen-4 RF02948 Gene; sRNA; 8 0 cow-rumen-4 RNA
333 CPEB3_ribozyme RF00622 Gene; ribozyme; 12 98 Mammalian CPEB3 ribozyme
334 CpoB_ybgF_thermometer RF02782 Cis-reg; thermoregulator; 8 137 CpoB/ybgF ICR thermometer
335 CrcZ RF01675 Gene; sRNA; 19 149 Pseudomonas sRNA CrcZ
336 CrfA RF01527 Gene; sRNA; 2 33 Caulobacter sRNA CrfA
337 CRISPR-DR10 RF01323 Gene; CRISPR; 5 294 CRISPR RNA direct repeat element
338 CRISPR-DR11 RF01324 Gene; CRISPR; 5 38 CRISPR RNA direct repeat element
339 CRISPR-DR12 RF01325 Gene; CRISPR; 5 257 CRISPR RNA direct repeat element
340 CRISPR-DR13 RF01326 Gene; CRISPR; 4 130 CRISPR RNA direct repeat element
341 CRISPR-DR14 RF01327 Gene; CRISPR; 5 184 CRISPR RNA direct repeat element
342 CRISPR-DR15 RF01329 Gene; CRISPR; 3 104 CRISPR RNA direct repeat element
343 CRISPR-DR16 RF01330 Gene; CRISPR; 6 589 CRISPR RNA direct repeat element
344 CRISPR-DR17 RF01328 Gene; CRISPR; 3 45 CRISPR RNA direct repeat element
345 CRISPR-DR18 RF01331 Gene; CRISPR; 6 28 CRISPR RNA direct repeat element
346 CRISPR-DR19 RF01332 Gene; CRISPR; 4 405 CRISPR RNA direct repeat element
347 CRISPR-DR2 RF01315 Gene; CRISPR; 19 9,051 CRISPR RNA direct repeat element
348 CRISPR-DR20 RF01333 Gene; CRISPR; 3 38 CRISPR RNA direct repeat element
349 CRISPR-DR21 RF01334 Gene; CRISPR; 2 276 CRISPR RNA direct repeat element
350 CRISPR-DR22 RF01335 Gene; CRISPR; 9 478 CRISPR RNA direct repeat element
351 CRISPR-DR23 RF01336 Gene; CRISPR; 3 148 CRISPR RNA direct repeat element
352 CRISPR-DR24 RF01337 Gene; CRISPR; 4 1,217 CRISPR RNA direct repeat element
353 CRISPR-DR25 RF01338 Gene; CRISPR; 5 303 CRISPR RNA direct repeat element
354 CRISPR-DR26 RF01355 Gene; CRISPR; 4 47 CRISPR RNA direct repeat element
355 CRISPR-DR27 RF01339 Gene; CRISPR; 3 130 CRISPR RNA direct repeat element
356 CRISPR-DR28 RF01356 Gene; CRISPR; 3 614 CRISPR RNA direct repeat element
357 CRISPR-DR29 RF01340 Gene; CRISPR; 2 129 CRISPR RNA direct repeat element
358 CRISPR-DR3 RF01316 Gene; CRISPR; 20 1,307 CRISPR RNA direct repeat element
359 CRISPR-DR30 RF01341 Gene; CRISPR; 3 19 CRISPR RNA direct repeat element
360 CRISPR-DR31 RF01357 Gene; CRISPR; 3 19 CRISPR RNA direct repeat element
361 CRISPR-DR32 RF01342 Gene; CRISPR; 2 34 CRISPR RNA direct repeat element
362 CRISPR-DR33 RF01343 Gene; CRISPR; 3 178 CRISPR RNA direct repeat element
363 CRISPR-DR34 RF01344 Gene; CRISPR; 5 377 CRISPR RNA direct repeat element
364 CRISPR-DR35 RF01345 Gene; CRISPR; 2 129 CRISPR RNA direct repeat element
365 CRISPR-DR36 RF01346 Gene; CRISPR; 3 67 CRISPR RNA direct repeat element
366 CRISPR-DR37 RF01347 Gene; CRISPR; 3 182 CRISPR RNA direct repeat element
367 CRISPR-DR38 RF01348 Gene; CRISPR; 5 109 CRISPR RNA direct repeat element
368 CRISPR-DR39 RF01358 Gene; CRISPR; 3 136 CRISPR RNA direct repeat element
369 CRISPR-DR4 RF01317 Gene; CRISPR; 33 10,236 CRISPR RNA direct repeat element
370 CRISPR-DR40 RF01349 Gene; CRISPR; 3 0 CRISPR RNA direct repeat element
371 CRISPR-DR41 RF01350 Gene; CRISPR; 2 36 CRISPR RNA direct repeat element
372 CRISPR-DR42 RF01351 Gene; CRISPR; 3 5 CRISPR RNA direct repeat element
373 CRISPR-DR43 RF01352 Gene; CRISPR; 3 985 CRISPR RNA direct repeat element
374 CRISPR-DR44 RF01353 Gene; CRISPR; 3 33 CRISPR RNA direct repeat element
375 CRISPR-DR45 RF01354 Gene; CRISPR; 3 323 CRISPR RNA direct repeat element
376 CRISPR-DR46 RF01359 Gene; CRISPR; 2 5 CRISPR RNA direct repeat element
377 CRISPR-DR47 RF01360 Gene; CRISPR; 2 43 CRISPR RNA direct repeat element
378 CRISPR-DR48 RF01361 Gene; CRISPR; 2 9 CRISPR RNA direct repeat element
379 CRISPR-DR49 RF01362 Gene; CRISPR; 3 214 CRISPR RNA direct repeat element
380 CRISPR-DR5 RF01318 Gene; CRISPR; 12 4,678 CRISPR RNA direct repeat element
381 CRISPR-DR50 RF01363 Gene; CRISPR; 2 386 CRISPR RNA direct repeat element
382 CRISPR-DR51 RF01364 Gene; CRISPR; 2 23 CRISPR RNA direct repeat element
383 CRISPR-DR52 RF01365 Gene; CRISPR; 2 50 CRISPR RNA direct repeat element
384 CRISPR-DR53 RF01366 Gene; CRISPR; 2 14 CRISPR RNA direct repeat element
385 CRISPR-DR54 RF01367 Gene; CRISPR; 2 21 CRISPR RNA direct repeat element
386 CRISPR-DR55 RF01368 Gene; CRISPR; 2 45 CRISPR RNA direct repeat element
387 CRISPR-DR56 RF01369 Gene; CRISPR; 2 100 CRISPR RNA direct repeat element
388 CRISPR-DR57 RF01370 Gene; CRISPR; 3 439 CRISPR RNA direct repeat element
389 CRISPR-DR58 RF01371 Gene; CRISPR; 2 100 CRISPR RNA direct repeat element
390 CRISPR-DR6 RF01319 Gene; CRISPR; 7 615 CRISPR RNA direct repeat element
391 CRISPR-DR60 RF01373 Gene; CRISPR; 2 169 CRISPR RNA direct repeat element
392 CRISPR-DR61 RF01374 Gene; CRISPR; 2 2 CRISPR RNA direct repeat element
393 CRISPR-DR62 RF01375 Gene; CRISPR; 2 0 CRISPR RNA direct repeat element
394 CRISPR-DR63 RF01376 Gene; CRISPR; 2 38 CRISPR RNA direct repeat element
395 CRISPR-DR64 RF01377 Gene; CRISPR; 2 0 CRISPR RNA direct repeat element
396 CRISPR-DR65 RF01378 Gene; CRISPR; 2 1 CRISPR RNA direct repeat element
397 CRISPR-DR66 RF01379 Gene; CRISPR; 4 126 CRISPR RNA direct repeat element
398 CRISPR-DR7 RF01320 Gene; CRISPR; 10 2,400 CRISPR RNA direct repeat element
399 CRISPR-DR8 RF01321 Gene; CRISPR; 5 72 CRISPR RNA direct repeat element
400 CRISPR-DR9 RF01322 Gene; CRISPR; 7 1,362 CRISPR RNA direct repeat element
401 cspA RF01766 Cis-reg; thermoregulator; 15 1,711 cspA thermoregulator
402 CsrB RF00018 Gene; sRNA; 38 254 CsrB/RsmB RNA family
403 CsrC RF00084 Gene; sRNA; 4 38 CsrC RNA family
404 csRNA RF02379 Gene; sRNA; 48 74 Cia-dependent small RNA csRNA1
405 CssrA RF02798 Gene; sRNA; 4 7 Chromosome-encoded Shigella sRNA A
406 CssrB RF02799 Gene; sRNA; 3 2 Chromosome-encoded Shigella sRNA B
407 ctRNA_p42d RF00489 Gene; antisense; 10 212 ctRNA
408 ctRNA_pGA1 RF00236 Gene; antisense; 15 16 ctRNA
409 ctRNA_pND324 RF00238 Gene; antisense; 48 30 ctRNA
410 ctRNA_pT181 RF00242 Gene; antisense; 16 17 ctRNA
411 CTV_rep_sig RF00193 Cis-reg; 9 1 Citrus tristeza virus replication signal
412 Cupriavidus-1 RF02949 Gene; sRNA; 5 9 Cupriavidus-1 RNA
413 Cyano-1 RF01701 Gene; sRNA; 265 258 Cyano-1 RNA
414 Cyano-2 RF01702 Gene; sRNA; 57 9 Cyano-2 RNA
415 cyano_het_sRNA RF02596 Gene; sRNA; 5 26 Cyanobacteria heterocyst sRNA
416 cyano_tmRNA RF01851 Gene; 27 21 Cyanobacteria transfer-messenger RNA
417 CyaR_RyeE RF00112 Gene; sRNA; 17 88 CyaR/Rye RNA
418 CyVA-1 RF02965 Gene; sRNA; 123 63 CyVA-1 RNA
419 D12-methyl RF02950 Gene; sRNA; 19 0 D12-methyl RNA
420 DABA-DC-AT RF02951 Cis-reg; 126 55 DABA-DC-AT RNA
421 DAOA-AS1_1 RF02090 Gene; lncRNA; 24 37 DAOA antisense RNA 1 conserved region 1
422 DAOA-AS1_2 RF02091 Gene; lncRNA; 24 64 DAOA antisense RNA 1 conserved region 2
423 DapZ RF02551 Cis-reg; 6 58 ABC transporter regulator
424 DdR1 RF01559 Gene; snRNA; snoRNA; CD-box; 3 2 Dictyostelium snoRNA DdR1
425 DdR10 RF01560 Gene; snRNA; snoRNA; CD-box; 4 5 Dictyostelium snoRNA DdR10
426 DdR11 RF01561 Gene; snRNA; snoRNA; CD-box; 3 5 Dictyostelium snoRNA DdR11
427 DdR12 RF01562 Gene; snRNA; snoRNA; CD-box; 2 1 D. discoideum snoRNA DdR12
428 DdR13 RF01563 Gene; snRNA; snoRNA; CD-box; 3 3 Dictyostelium snoRNA DdR13
429 DdR14 RF01564 Gene; snRNA; snoRNA; CD-box; 2 1 D. discoideum snoRNA DdR14
430 DdR15 RF01565 Gene; snRNA; snoRNA; CD-box; 3 2 Dictyostelium snoRNA DdR15
431 DdR16 RF01566 Gene; snRNA; snoRNA; CD-box; 4 5 Dictyostelium snoRNA DdR16
432 DdR17 RF01567 Gene; snRNA; snoRNA; CD-box; 2 1 D. discoideum snoRNA DdR17
433 DdR18 RF01568 Gene; snRNA; snoRNA; HACA-box; 3 2 Dictyostelium snoRNA DdR18
434 DdR2 RF01569 Gene; snRNA; snoRNA; CD-box; 3 3 Dictyostelium snoRNA DdR2
435 DdR35 RF01571 Gene; sRNA; 3 2 D. discoideum class II sRNA
436 DdR4 RF01572 Gene; snRNA; snoRNA; CD-box; 3 2 Dictyostelium snoRNA DdR4
437 DdR5 RF01573 Gene; snRNA; snoRNA; CD-box; 3 2 Dictyostelium snoRNA DdR5
438 DdR6 RF01574 Gene; snRNA; snoRNA; CD-box; 3 2 Dictyostelium snoRNA DdR6
439 DdR7 RF01575 Gene; snRNA; snoRNA; CD-box; 3 2 Dictyostelium snoRNA Dd7
440 DdR8 RF01576 Gene; snRNA; snoRNA; CD-box; 2 1 D. discoideum snoRNA DdR8
441 Deinococcus_Y_RNA RF01053 Gene; 2 1 Deinococcus radiodurans Y RNA
442 DENV_SLA RF02340 Cis-reg; 4 3 Dengue virus SLA
443 dfrA-dnaX RF02952 Gene; sRNA; 138 20 dfrA-dnaX RNA
444 DGCR5 RF02098 Gene; lncRNA; 4 13 DiGeorge syndrome critical region gene 5 conserved region
445 Diantho_3_UTR RF02456 Cis-reg; 2 0 Dianthovirus RNA2 3'UTR stem loops
446 DicF RF00039 Gene; antisense; 5 3 DicF RNA
447 Dictyoglomi-1 RF01703 Gene; sRNA; 4 2 Dictyoglomi-1 RNA
448 Dictyostelium_SRP RF01570 Gene; snRNA; 3 4 Dictyostelium signal recognition particle
449 dinG RF03082 Gene; sRNA; 86 25 dinG RNA
450 DISC2 RF02102 Gene; lncRNA; 5 12 Disrupted in schizophrenia 2 conserved region
451 DLEU1_1 RF02103 Gene; lncRNA; 26 57 Deleted in lymphocytic leukemia 1 conserved region 1
452 DLEU1_2 RF02104 Gene; lncRNA; 16 22 Deleted in lymphocytic leukemia 1 conserved region 2
453 DLEU2_1 RF02105 Gene; lncRNA; 27 50 Deleted in lymphocytic leukemia 2 conserved region 1
454 DLEU2_2 RF02106 Gene; lncRNA; 18 33 Deleted in lymphocytic leukemia 2 conserved region 2
455 DLEU2_3 RF02107 Gene; lncRNA; 24 37 Deleted in lymphocytic leukemia 2 conserved region 3
456 DLEU2_4 RF02108 Gene; lncRNA; 21 47 Deleted in lymphocytic leukemia 2 conserved region 4
457 DLEU2_5 RF02109 Gene; lncRNA; 30 112 Deleted in lymphocytic leukemia 2 conserved region 5
458 DLEU2_6 RF02110 Gene; lncRNA; 32 65 Deleted in lymphocytic leukemia 2 conserved region 6
459 DLG2-AS1_1 RF02112 Gene; lncRNA; 21 40 DLG2 antisense RNA 1 conserved region 1
460 DLG2-AS1_2 RF02113 Gene; lncRNA; 23 36 DLG2 antisense RNA 1 conserved region 2
461 DLX6-AS1_1 RF01887 Gene; lncRNA; 15 36 Embryonic ventral forebrain RNA 1 conserved region 1
462 DLX6-AS1_2 RF01888 Gene; lncRNA; 19 36 Embryonic ventral forebrain RNA 1 conserved region 2
463 DM_SisR1 RF02575 Gene; 3 2 Drosophila melanogaster stable intronic sequence RNA 1
464 DnaX RF00382 Cis-reg; frameshift_element; 5 76 DnaX ribosomal frameshifting element
465 Downstream-peptide RF01704 Cis-reg; 627 66 Downstream peptide RNA
466 DPB RF01455 Cis-reg; 19 56 Stem loopII regulatory element in POLB
467 drum RF02958 Gene; sRNA; 464 54 drum RNA
468 drz-agam-1 RF01787 Gene; ribozyme; 7 9,217 drz-agam-1 ribozyme
469 drz-agam-2-2 RF01788 Gene; ribozyme; 5 2,137 drz-agam-2-2 ribozyme
470 DsrA RF00014 Gene; sRNA; 5 35 DsrA RNA
471 DUF1646 RF03071 Cis-reg; riboswitch; 146 118 DUF1646 RNA
472 DUF1874 RF02953 Cis-reg; 76 0 DUF1874 RNA
473 DUF2693 RF02956 Gene; sRNA; 63 0 DUF2693 RNA
474 DUF2693-FD RF02926 Gene; sRNA; 91 5 DUF2693-FD RNA
475 DUF2800 RF02960 Cis-reg; 155 13 DUF2800 RNA
476 DUF2815 RF03084 Gene; sRNA; 22 0 DUF2815 RNA
477 DUF3085 RF02959 Cis-reg; 16 15 DUF3085 RNA
478 DUF3268 RF02966 Gene; sRNA; 108 9 DUF3268 RNA
479 DUF3577 RF02954 Cis-reg; 86 4 DUF3577 RNA
480 DUF3800-I RF02969 Gene; sRNA; 321 30 DUF3800-I RNA
481 DUF3800-II RF02961 Gene; sRNA; 23 22 DUF3800-II RNA
482 DUF3800-III RF02962 Gene; sRNA; 55 18 DUF3800-III RNA
483 DUF3800-IV RF02963 Gene; sRNA; 10 3 DUF3800-IV RNA
484 DUF3800-IX RF02968 Gene; sRNA; 229 86 DUF3800-IX RNA
485 DUF3800-V RF02964 Gene; sRNA; 79 59 DUF3800-V RNA
486 DUF3800-VI RF02915 Cis-reg; 87 26 DUF3800-VI RNA
487 DUF3800-VII RF02967 Gene; sRNA; 139 21 DUF3800-VII RNA
488 DUF3800-VIII RF03075 Gene; sRNA; 209 45 DUF3800-VIII RNA
489 DUF3800-X RF02984 Gene; sRNA; 88 13 DUF3800-X RNA
490 DUF3800-XI RF02975 Gene; sRNA; 256 42 DUF3800-XI RNA
491 DUF805 RF03081 Cis-reg; 46 235 DUF805 RNA
492 DUF805b RF02914 Cis-reg; 1,230 807 DUF805b RNA
493 EAV_LTH RF00498 Cis-reg; leader; 6 1 Equine arteritis virus leader TRS hairpin (LTH)
494 EBER1 RF01789 Gene; sRNA; 3 4 Epstein-Barr virus EBER1
495 EBER2 RF02712 Gene; sRNA; 3 3 Epstein-Barr virus EBER2
496 EBv-sisRNA-1 RF02595 Gene; 8 26 Epstein-Barr virus stable intronic sequence RNA 1
497 EBv-sisRNA-2 RF02598 Gene; 2 71 Epstein-Barr virus stable intronic sequence RNA 2
498 eeev_FSE RF01839 Cis-reg; frameshift_element; 6 0 eastern equine encephalitis ribosomal frameshift element
499 EF0408_EF0409 RF02637 Gene; sRNA; 3 3 Enterococcus sRNA EF0408_EF0409
500 EF0605_EF0606 RF02638 Gene; sRNA; 2 1 Enterococcus sRNA EF0605_EF0606
501 EF0820_EF0821 RF02635 Gene; sRNA; 2 3 Enterococcus sRNA EF0820_EF0821
502 EF0869_EF0870 RF02639 Gene; sRNA; 4 3 Enterococcus sRNA EF0869_EF0870
503 EF1368_EF1369 RF02636 Gene; sRNA; 4 3 Enterococcus sRNA EF1368_EF1369
504 EF3314_EF3315 RF02634 Gene; sRNA; 2 3 Enterococcus sRNA EF3314_EF3315
505 EFASI RF02957 Gene; sRNA; 448 105 EFASI RNA
506 EGFOA RF02955 Gene; sRNA; 73 26 EGFOA RNA
507 EGFOA-assoc-1 RF02970 Gene; sRNA; 10 0 EGFOA-assoc-1 RNA
508 eiav_FSE RF01792 Cis-reg; frameshift_element; 5 0 ribosomal frameshift site
509 emrB-Lactobacillus RF02971 Gene; sRNA; 39 11 emrB-Lactobacillus RNA
510 engA RF02972 Cis-reg; 154 26 engA RNA
511 enod40 RF01845 Gene; 35 125 Early nodulin 40
512 Enterococcus-1 RF02973 Gene; sRNA; 78 7 Enterococcus-1 RNA
513 Entero_5_CRE RF00386 Cis-reg; 160 2 Enterovirus 5' cloverleaf cis-acting replication element
514 Entero_CRE RF00048 Cis-reg; 56 5 Enterovirus cis-acting replication element
515 Entero_OriR RF00041 Cis-reg; 60 0 Enteroviral 3' UTR element
516 epsC RF01735 Cis-reg; 30 210 epsC RNA
517 Erse RF02757 Gene; sRNA; 6 29 Erse small RNA
518 ES003 RF02750 Gene; sRNA; 8 2 ES003 sRNA
519 ES036 RF02751 Gene; sRNA; 4 18 ES036 (CssrF) sRNA
520 ES056 RF02752 Gene; sRNA; 6 3 ES056 sRNA
521 ES173 RF02753 Gene; sRNA; 4 10 ES173 sRNA
522 ES205 RF02754 Gene; sRNA; 5 3 ES205 sRNA
523 ES222 RF02755 Gene; sRNA; 5 24 ES222 sRNA
524 ES239 RF02756 Gene; sRNA; 5 3 ES239 sRNA
525 Esr41 RF02676 Gene; sRNA; 3 0 Enterohemorrhagic E. coli sRNA 41
526 Evf-2_5p RF01778 Gene; lncRNA; 13 94 Embryonic ventral forebrain-2 long ncRNA
527 F6 RF01791 Gene; sRNA; 16 187 F6 TB sRNA
528 FAM13A-AS1_1 RF02114 Gene; lncRNA; 10 24 FAM13A antisense RNA 1 conserved region 1
529 FAM13A-AS1_2 RF02115 Gene; lncRNA; 10 29 FAM13A antisense RNA 1 conserved region 2
530 FAS-AS1 RF02116 Gene; lncRNA; 19 34 FAS antisense RNA 1 conserved region
531 FasX RF02384 Gene; sRNA; 8 11 FasX small RNA
532 FdoG1_thermometer RF02778 Cis-reg; thermoregulator; 4 14 FdoG-1 5' UTR thermometer
533 ffh RF01793 Gene; sRNA; 89 539 ffh sRNA
534 FHbp_thermometer RF02811 Cis-reg; thermoregulator; 2 2 FHbp 5' UTR thermometer
535 Fibro-purF RF02974 Cis-reg; 12 7 Fibro-purF RNA
536 Fibrobacter-1 RF02983 Gene; sRNA; 4 5 Fibrobacter-1 RNA
537 FIE3 RF00227 Cis-reg; 5 8 FIE3 (ftz instability element 3') element
538 FinP RF00107 Gene; 6 11 FinP
539 fiv_FSE RF01834 Cis-reg; frameshift_element; 5 0 ribosomal frameshift site
540 Flavivirus_DB RF00525 Cis-reg; 111 5 Flavivirus DB element
541 Flavivirus_SLIV RF01415 Cis-reg; 20 0 Flavivirus 3'UTR stem loop IV
542 Flavi_CRE RF00185 Cis-reg; 84 4 Flavivirus 3' UTR cis-acting replication element (CRE)
543 flavi_FSE RF01768 Cis-reg; frameshift_element; 7 0 ribosomal frameshift site
544 Flavo-1 RF01705 Gene; sRNA; 201 5,164 Flavo-1 RNA
545 Flavobacterium-1 RF02976 Gene; sRNA; 210 0 Flavobacterium-1 RNA
546 flg-Rhizobiales RF01736 Cis-reg; 13 36 flg-Rhizobiales RNA
547 flpD RF01737 Cis-reg; 8 5 flpD RNA
548 Fluoride RF01734 Cis-reg; riboswitch; 287 1,851 Fluoride riboswitch
549 FMN RF00050 Cis-reg; riboswitch; 144 4,009 FMN riboswitch (RFN element)
550 FMR1-AS1_1 RF02117 Gene; lncRNA; 20 31 FMR1 antisense RNA 1 conserved region 1
551 FMR1-AS1_2 RF02118 Gene; lncRNA; 25 28 FMR1 antisense RNA 1 conserved region 2
552 folE RF02977 Cis-reg; 45 39 folE RNA
553 folP RF02978 Cis-reg; 28 5 folP RNA
554 FourU RF01795 Cis-reg; thermoregulator; 3 17 FourU thermometer RNA element
555 freshwater-1 RF02979 Gene; sRNA; 8 0 freshwater-1 RNA
556 freshwater-2 RF02980 Cis-reg; 200 0 freshwater-2 RNA
557 frnS RF01796 Gene; sRNA; 16 108 Fumarate/nitrate reductase regulator sRNA
558 FsrA RF02273 Gene; 6 7 FsrA
559 fstAT RF01797 Gene; antitoxin; 22 35 Fst antitoxin sRNA
560 FTHFS RF02981 Cis-reg; 27 4 FTHFS RNA
561 FtrA RF02747 Gene; sRNA; 5 1 Francisella sRNA A
562 FtrB RF02748 Gene; sRNA; 5 3 Francisella sRNA B
563 ftsZ-DE RF02985 Gene; sRNA; 10 7 ftsZ-DE RNA
564 FTX_1 RF02119 Gene; lncRNA; 11 33 FTX transcript, XIST regulator conserved region 1
565 FTX_2 RF02120 Gene; lncRNA; 18 28 FTX transcript, XIST regulator conserved region 2
566 FTX_3 RF02121 Gene; lncRNA; 14 28 FTX transcript, XIST regulator conserved region 3
567 FTX_4 RF02123 Gene; lncRNA; 13 25 FTX transcript, XIST regulator conserved region 4
568 FTX_5 RF02122 Gene; lncRNA; 14 36 FTX transcript, XIST regulator conserved region 5
569 FuFi-1 RF02986 Gene; sRNA; 170 12 FuFi-1 RNA
570 Fungi_SRP RF01502 Gene; 50 330 Fungal signal recognition particle RNA
571 Fungi_U3 RF01846 Gene; snRNA; snoRNA; CD-box; 66 577 Fungal small nucleolar RNA U3
572 Fusobacteriales-1 RF02920 Cis-reg; 13 9 Fusobacteriales-1 RNA
573 Fwd6_3p_UTR RF02740 Cis-reg; 3 5 Soft rot Enterobacteriaceae Fwd 6 3'UTR
574 G-CSF_SLDE RF00183 Cis-reg; 16 37 G-CSF factor stem-loop destabilising element (SLDE)
575 g2 RF01798 Gene; 2 1 G2
576 GA-cis RF02987 Gene; sRNA; 481 145 GA-cis RNA
577 GABA3 RF01803 Cis-reg; 52 689 Editing element of GABA-3 exon 9
578 gabT RF01738 Cis-reg; 17 56 gabT RNA
579 gadd7 RF01800 Gene; lncRNA; 2 5 growth arrested DNA-damage inducible gene 7
580 GadY RF00122 Gene; sRNA; 5 2 GadY
581 GAIT RF00179 Cis-reg; 8 32 GAIT element
582 Gammaretro_CES RF00374 Cis-reg; 22 143 Gammaretrovirus core encapsidation signal
583 GcvB RF00022 Gene; 27 207 GcvB RNA
584 GEBRO RF02988 Gene; sRNA; 42 0 GEBRO RNA
585 GHRLOS RF02126 Gene; lncRNA; 16 21 Ghrelin opposite strand RNA conserved region
586 GIR1 RF01807 Gene; ribozyme; 12 0 GIR1 branching ribozyme
587 glmS RF00234 Cis-reg; riboswitch; 18 925 glmS glucosamine-6-phosphate activated ribozyme
588 GlmY_tke1 RF00128 Gene; sRNA; 17 113 Glm Y RNA activator of glmS mRNA
589 GlmZ_SraJ RF00083 Gene; sRNA; 21 100 GlmZ RNA activator of glmS mRNA
590 glnA RF01739 Cis-reg; riboswitch; 956 169 Glutamine riboswitch
591 GlsR10 RF02478 Gene; snRNA; snoRNA; CD-box; 2 2 Small nucleolar RNA GlsR10
592 GlsR13 RF02479 Gene; snRNA; snoRNA; CD-box; 3 2 Small nucleolar RNA GlsR13
593 GlsR14 RF02480 Gene; snRNA; snoRNA; CD-box; 3 1 Small nucleolar RNA GlsR14
594 GlsR16_miR3 RF02338 Gene; miRNA; 3 2 Giardia snoRNA GlsR16//miRNA miR3
595 GlsR17_miR2 RF02339 Gene; miRNA; 4 2 Giardia snoRNA GlsR17/miRNA miR2
596 GlsR18 RF02481 Gene; snRNA; snoRNA; HACA-box; 3 2 Small nucleolar RNA GlsR18
597 GlsR19 RF02482 Gene; snRNA; snoRNA; HACA-box; 3 2 Small nucleolar RNA GlsR19
598 GlsR1_miR6 RF02336 Gene; miRNA; 2 2 Giardia snoRNA GlsR1/miRNA miR6
599 GlsR20 RF02483 Gene; snRNA; snoRNA; HACA-box; 3 2 Small nucleolar RNA GlsR20
600 GlsR21 RF02484 Gene; snRNA; snoRNA; HACA-box; 3 2 Small nucleolar RNA GlsR21
601 GlsR22 RF02485 Gene; snRNA; snoRNA; HACA-box; 3 2 Small nucleolar RNA GlsR22
602 GlsR23 RF02486 Gene; snRNA; snoRNA; HACA-box; 2 2 Small nucleolar RNA GlsR23
603 GlsR24 RF02487 Gene; snRNA; snoRNA; HACA-box; 3 3 Small nucleolar RNA GlsR24
604 GlsR25 RF02488 Gene; snRNA; snoRNA; HACA-box; 3 2 Small nucleolar RNA GlsR25
605 GlsR26 RF02489 Gene; snRNA; snoRNA; HACA-box; 3 2 Small nucleolar RNA GlsR26
606 GlsR27 RF02490 Gene; snRNA; snoRNA; HACA-box; 2 2 Small nucleolar RNA GlsR27
607 GlsR2_miR4 RF02335 Gene; miRNA; 3 2 Giardia snoRNA GlsR2/miRNA miR4
608 GlsR4 RF02473 Gene; snRNA; snoRNA; CD-box; 2 2 Small nucleolar RNA GlsR4
609 GlsR5 RF02474 Gene; snRNA; snoRNA; CD-box; 2 2 Small nucleolar RNA GlsR5
610 GlsR6 RF02475 Gene; snRNA; snoRNA; CD-box; 3 2 Small nucleolar RNA GlsR6
611 GlsR7 RF02476 Gene; snRNA; snoRNA; CD-box; 3 2 Small nucleolar RNA GlsR7
612 GlsR8_miR10 RF02337 Gene; miRNA; 3 2 Giardia snoRNA GlsR8/miRNA miR10
613 GlsR9 RF02477 Gene; snRNA; snoRNA; CD-box; 2 2 Small nucleolar RNA GlsR9
614 gltS RF02982 Cis-reg; 108 38 gltS RNA
615 Glycine RF00504 Cis-reg; riboswitch; 44 4,573 Glycine riboswitch
616 Gl_RNase_MRP RF02472 Gene; ribozyme; 2 2 Giardia RNase MRP
617 Gl_U1 RF02491 Gene; snRNA; splicing; 2 2 Giardia U1 spliceosomal RNA
618 Gl_U2 RF02492 Gene; snRNA; splicing; 2 2 Giardia U2 spliceosomal RNA
619 Gl_U4 RF02493 Gene; snRNA; splicing; 2 2 Giardia U4 spliceosomal RNA
620 Gl_U6 RF02494 Gene; snRNA; splicing; 2 2 Giardia U6 spliceosomal RNA
621 GmglnB1_5p_UTR RF02663 Cis-reg; 2 3 GmglnB1 5'UTR
622 GNAS-AS1_1 RF02127 Gene; lncRNA; 21 37 GNAS antisense RNA 1 conserved region 1
623 GNAS-AS1_2 RF02128 Gene; lncRNA; 16 29 GNAS antisense RNA 1 conserved region 2
624 GNAS-AS1_3 RF02129 Gene; lncRNA; 9 24 GNAS antisense RNA 1 conserved region 3
625 GNAS-AS1_4 RF02130 Gene; lncRNA; 18 42 GNAS antisense RNA 1 conserved region 4
626 GNAS-AS1_5 RF02131 Gene; lncRNA; 22 38 GNAS antisense RNA 1 conserved region 5
627 gntR-DTE RF02989 Gene; sRNA; 7 23 gntR-DTE RNA
628 GOLLD RF02032 Gene; 35 26 Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA
629 GP20-a RF02991 Cis-reg; 54 0 GP20-a RNA
630 GP20-b RF03003 Cis-reg; 210 48 GP20-b RNA
631 GP_knot1 RF01073 Cis-reg; 7 3,204 Gag/pol translational readthrough site
632 GP_knot2 RF01092 Cis-reg; 2 0 Gag/pol translational readthrough site
633 greA RF01769 Cis-reg; leader; 25 99 Enterobacteria greA leader
634 GRIK4_3p_UTR RF01383 Gene; 8 18 GRIK4 3 prime UTR element
635 group-II-D1D4-1 RF01998 Intron; 237 2,034 Group II catalytic intron D1-D4-1
636 group-II-D1D4-2 RF01999 Intron; 144 678 Group II catalytic intron D1-D4-2
637 group-II-D1D4-3 RF02001 Intron; 406 3,139 Group II catalytic intron D1-D4-3
638 group-II-D1D4-4 RF02003 Intron; 90 530 Group II catalytic intron D1-D4-4
639 group-II-D1D4-5 RF02004 Intron; 139 411 Group II catalytic intron D1-D4-5
640 group-II-D1D4-6 RF02005 Intron; 174 1,215 Group II catalytic intron D1-D4-6
641 group-II-D1D4-7 RF02012 Intron; 244 804 Group II catalytic intron D1-D4-7
642 Gurken RF00626 Cis-reg; 3 1 Gurken localisation signal
643 Gut-1 RF01706 Gene; sRNA; 38 72 Gut-1 RNA
644 gut-2 RF02990 Gene; sRNA; 73 8 gut-2 RNA
645 gyrA RF01740 Cis-reg; 18 86 gyrA RNA
646 H19_1 RF01972 Gene; lncRNA; 35 29 H19 conserved region 1
647 H19_2 RF01973 Gene; lncRNA; 23 30 H19 conserved region 2
648 H19_3 RF01974 Gene; lncRNA; 5 29 H19 conserved region 3
649 h2cR RF02369 Gene; sRNA; 7 7 h2cR sRNA
650 Hairpin RF00173 Gene; ribozyme; 5 1 Hairpin ribozyme
651 Hammerhead_1 RF00163 Gene; ribozyme; 29 190,650 Hammerhead ribozyme (type I)
652 Hammerhead_3 RF00008 Gene; ribozyme; 82 3,098 Hammerhead ribozyme (type III)
653 Hammerhead_HH10 RF02277 Gene; ribozyme; 18 33 Hammerhead ribozyme HH10
654 Hammerhead_HH9 RF02275 Gene; ribozyme; 33 235 Hammerhead ribozyme HH9
655 Hammerhead_II RF02276 Gene; ribozyme; 24 203 Hammerhead ribozyme (type II)
656 HAR1A RF00635 Gene; lncRNA; 13 88 Highly accelerated region 1A/1B
657 Hatchet RF02678 Gene; ribozyme; 8 1 Hatchet ribozyme
658 HAV_CRE RF02533 Cis-reg; 2 1 Hepatitis A virus (HAV) cis-acting replication element (CRE)
659 HBV_epsilon RF01047 Cis-reg; 32 3 HBV RNA encapsidation signal epsilon
660 HBV_PRE_1151-1410 RF02816 Cis-reg; 2 5 Hepatitis B virus post-transcriptional regulatory element 1151-1410
661 HCV_ARF_SL RF00620 Cis-reg; 36 1 Hepatitis C alternative reading frame stem-loop
662 HCV_package RF02585 Cis-reg; 3 3 Hepatitis C virus RNA packaging signal
663 HCV_package-SL4629 RF02587 Cis-reg; 2 9 Hepatitis C virus RNA packaging signal 4629
664 HCV_package-SL6067 RF02588 Cis-reg; 3 0 Hepatitis C virus RNA packaging signal 6067
665 HCV_package-SL733 RF02586 Cis-reg; 4 4 Hepatitis C virus RNA packaging signal 733
666 HCV_SLIV RF00469 Cis-reg; 110 1 Hepatitis C stem-loop IV
667 HCV_SLVII RF00468 Cis-reg; 110 1 Hepatitis C virus stem-loop VII
668 HCV_X3 RF00481 Cis-reg; 22 1 Hepatitis C virus 3'X element
669 HDV-F-prausnitzii RF02682 Gene; ribozyme; 48 3,005 HDV ribozyme from F. prausnitzii
670 HDV_ribozyme RF00094 Gene; ribozyme; 33 7 Hepatitis delta virus ribozyme
671 HEARO RF02033 Gene; 110 1,033 HNH endonuclease-associated RNA and ORF (HEARO) RNA
672 HepC_CRE RF00260 Cis-reg; 52 2 Hepatitis C virus (HCV) cis-acting replication element (CRE)
673 HepE_CRE RF00550 Cis-reg; 46 1 Hepatitis E virus cis-reactive element
674 HgcC RF00062 Gene; 5 15 HgcC family RNA
675 HgcE RF00060 Gene; snRNA; snoRNA; HACA-box; 4 7 HgcE RNA (Pab105)
676 HgcF RF00058 Gene; snRNA; snoRNA; HACA-box; 4 11 HgcF RNA (Pab35)
677 HgcG RF00064 Gene; snRNA; snoRNA; HACA-box 5 16 HgcG RNA (Pab40)
678 hilD_3p_UTR RF02689 Cis-reg; 5 5 hilD 3'UTR
679 Histone3 RF00032 Cis-reg; 46 30,457 Histone 3' UTR stem-loop
680 His_leader RF00514 Cis-reg; leader; 33 257 Histidine operon leader
681 HIV-1_DIS RF00175 Cis-reg; 70 17 Human immunodeficiency virus type 1 dimerisation initiation site
682 HIV-1_SD RF01380 Cis-reg; 22 24 Human immunodeficiency virus type 1 major splice donor
683 HIV-1_SL3 RF01381 Cis-reg; 19 14 HIV-1 stem-loop 3 Psi packaging signal
684 HIV-1_SL4 RF01382 Cis-reg; 16 28 HIV-1 stem-loop 4 packaging signal
685 HIV_FE RF00480 Cis-reg; frameshift_element; 145 16 HIV Ribosomal frameshift signal
686 HIV_FS2 RF01835 Cis-reg; frameshift_element; 19 3 ribosomal frameshift site
687 HIV_GSL3 RF00376 Cis-reg; 72 23 HIV gag stem loop 3 (GSL3)
688 HIV_PBS RF00375 Cis-reg; 130 19 HIV primer binding site (PBS)
689 HIV_POL-1_SL RF01418 Cis-reg; 29 19 HIV pol-1 stem loop
690 HLE RF00437 Cis-reg; 5 5 Hairy RNA localisation element (HLE)
691 HOLDH RF02997 Gene; sRNA; 13 0 HOLDH RNA
692 HOTAIRM1_1 RF01975 Gene; lncRNA; 14 33 HOX antisense intergenic RNA myeloid 1 conserved region 1
693 HOTAIRM1_2 RF01976 Gene; lncRNA; 7 112 HOX antisense intergenic RNA myeloid 1 conserved region 2
694 HOTAIRM1_3 RF01977 Gene; lncRNA; 11 38 HOX antisense intergenic RNA myeloid 1 conserved region 3
695 HOTAIRM1_4 RF01978 Gene; lncRNA; 10 41 HOX antisense intergenic RNA myeloid 1 conserved region 4
696 HOTAIRM1_5 RF01979 Gene; lncRNA; 10 37 HOX antisense intergenic RNA myeloid 1 conserved region 5
697 HOTAIR_1 RF01904 Gene; lncRNA; 9 35 HOTAIR conserved region 1
698 HOTAIR_2 RF01905 Gene; lncRNA; 11 36 HOTAIR conserved region 2
699 HOTAIR_3 RF01906 Gene; lncRNA; 17 31 HOTAIR conserved region 3
700 HOTTIP_1 RF02040 Gene; lncRNA; 7 28 HOXA transcript at the distal tip, conserved region 1
701 HOTTIP_2 RF02041 Gene; lncRNA; 25 74 HOXA transcript at the distal tip, conserved region 2
702 HOTTIP_3 RF02042 Gene; lncRNA; 23 36 HOXA transcript at the distal tip, conserved region 3
703 HOTTIP_4 RF02043 Gene; lncRNA; 19 37 HOXA transcript at the distal tip, conserved region 4
704 HOXA11-AS1_1 RF02137 Gene; lncRNA; 15 37 HOXA11 antisense RNA 1 conserved region 1
705 HOXA11-AS1_2 RF02138 Gene; lncRNA; 21 88 HOXA11 antisense RNA 1 conserved region 2
706 HOXA11-AS1_3 RF02139 Gene; lncRNA; 24 36 HOXA11 antisense RNA 1 conserved region 3
707 HOXA11-AS1_4 RF02140 Gene; lncRNA; 20 85 HOXA11 antisense RNA 1 conserved region 4
708 HOXA11-AS1_5 RF02141 Gene; lncRNA; 28 86 HOXA11 antisense RNA 1 conserved region 5
709 HOXA11-AS1_6 RF02142 Gene; lncRNA; 21 37 HOXA11 antisense RNA 1 conserved region 6
710 HOXB13-AS1_1 RF02132 Gene; lncRNA; 12 26 HOXB13 antisense RNA 1 conserved region 1
711 HOXB13-AS1_2 RF02133 Gene; lncRNA; 14 29 HOXB13 antisense RNA 1 conserved region 2
712 HPnc0260 RF02194 Gene; antisense; 31 147 Bacterial antisense RNA HPnc0260
713 HPnc0580 RF02269 Gene; sRNA; 7 27 Heliobacter pylori small RNA HPnc0580
714 HrrF RF02728 Gene; sRNA; 7 13 Haemophilus regulatory RNA responsive to iron
715 Hrs1 RF02628 Gene; sRNA; 2 28 Hfq-regulated sRNA 1
716 Hrs10 RF02632 Gene; sRNA; 2 1 Hfq-regulated sRNA 10
717 Hrs12 RF02630 Gene; sRNA; 2 1 Hfq-regulated sRNA 12
718 Hrs13 RF02631 Gene; sRNA; 2 4 Hfq-regulated sRNA 13
719 Hrs21 RF02633 Gene; sRNA; 2 1 Hfq-regulated sRNA 21
720 hsp17 RF02358 Cis-reg; thermoregulator; 3 2 Hsp17 thermometer
721 Hsp83_3_UTR RF02400 Cis-reg; 5 23 Heat shock protein 83 3' UTR
722 Hsp90_CRE RF00433 Cis-reg; thermoregulator; 6 8 Hsp90 cis-regulatory element
723 HSR-omega_1 RF01885 Gene; lncRNA; 13 11 Heat shock gene hsromega conserved region 1
724 HSR-omega_2 RF01886 Gene; lncRNA; 10 12 Heat shock gene hsromega conserved region 2
725 HSUR RF01802 Gene; snRNA; 4 2 Herpesvirus saimiri U RNA1/RNA2
726 HTH-XRE RF02923 Cis-reg; 60 10 HTH-XRE RNA
727 htlv_FSE RF01790 Cis-reg; frameshift_element; 8 8 ribosomal frameshift site
728 HtrA_thermometer RF02700 Cis-reg; thermoregulator; 4 12 HtrA 5' UTR thermometer
729 HTT-AS1_1 RF02134 Gene; lncRNA; 3 9 HTT antisense RNA 1 conserved region 1
730 HTT-AS1_2 RF02135 Gene; lncRNA; 3 8 HTT antisense RNA 1 conserved region 2
731 HTT-AS1_3 RF02136 Gene; lncRNA; 4 7 HTT antisense RNA 1 conserved region 3
732 HULC RF02101 Gene; lncRNA; 19 32 Highly up-regulated in liver cancer conserved region
733 hveRNA RF02555 Gene; rRNA; 7 0 mt-5S-like H. vermiformis
734 hvt-mir-H RF01940 Gene; miRNA; 4 10 microRNA hvt-mir-H9
735 hya RF02992 Cis-reg; 27 56 hya RNA
736 HYMAI RF02143 Gene; lncRNA; 16 36 Hydatidiform mole associated and imprinted conserved region 1
737 IBV_D-RNA RF00385 Cis-reg; 10 8 Infectious bronchitis virus D-RNA
738 icaR_3p_UTR RF02660 Cis-reg; 3 1 icaR 3'UTR
739 icaR_5p_UTR RF02661 Cis-reg; 2 2 icaR 5' UTR
740 IFN_gamma RF00259 Cis-reg; 5 35 Interferon gamma 5' UTR regulatory element
741 IhtA RF02569 Gene; sRNA; 5 4 IhtA sRNA
742 ilvB-OMG RF02919 Cis-reg; 28 6 ilvB-OMG RNA
743 ilvH RF02993 Cis-reg; 17 76 ilvH RNA
744 IMES-1 RF02034 Gene; 219 4 IMES-1 RNA motif
745 IMES-2 RF02035 Gene; 366 14 IMES-2 RNA motif
746 IMES-3 RF02036 Gene; 32 0 IMES-3 RNA motif
747 IMES-4 RF02037 Gene; 30 0 IMES-4 RNA motif
748 IMES-5 RF02995 Gene; sRNA; 52 0 IMES-5 RNA
749 IMPDH RF02994 Gene; sRNA; 81 8 IMPDH RNA
750 int-alpA RF02996 Gene; sRNA; 167 395 int-alpA RNA
751 Intron_gpI RF00028 Intron; 12 2,599 Group I catalytic intron
752 Intron_gpII RF00029 Intron; 92 15,637 Group II catalytic intron
753 InvR RF01384 Gene; 4 5 Invasion gene-associated RNA
754 IRES_APC RF00462 Cis-reg; IRES; 6 0 APC internal ribosome entry site (IRES)
755 IRES_Bag1 RF00222 Cis-reg; IRES; 15 55 Bag-1 internal ribosome entry site (IRES)
756 IRES_Bip RF00223 Cis-reg; IRES; 9 67 bip internal ribosome entry site (IRES)
757 IRES_c-myc RF00216 Cis-reg; IRES; 23 35 c-myc internal ribosome entry site (IRES)
758 IRES_c-sis RF00549 Cis-reg; IRES; 10 35 c-sis internal ribosome entry site (IRES)
759 IRES_Cripavirus RF00458 Cis-reg; IRES; 7 10 Cripavirus internal ribosome entry site (IRES)
760 IRES_Cx32 RF00484 Cis-reg; IRES; 6 35 Connexin-32 internal ribosome entry site (IRES)
761 IRES_Cx43 RF00487 Cis-reg; IRES; 14 127 Connexin-43 internal ribosome entry site (IRES)
762 IRES_cyp24a1 RF02664 Cis-reg; IRES; 2 9 Cyp24a1 internal ribosome entry site (IRES)
763 IRES_EBNA RF00448 Cis-reg; IRES; 6 4 Epstein-Barr virus nuclear antigen (EBNA) IRES
764 IRES_FGF1 RF00387 Cis-reg; IRES; 6 34 FGF-1 internal ribosome entry site (IRES)
765 IRES_FGF2 RF00224 Cis-reg; IRES; 6 17 FGF-2 internal ribosome entry site (IRES)
766 IRES_HCV RF00061 Cis-reg; IRES; 79 1 Hepatitis C virus internal ribosome entry site
767 IRES_HepA RF00228 Cis-reg; IRES; 23 1 Hepatitis A virus internal ribosome entry site (IRES)
768 IRES_HIF1 RF00449 Cis-reg; IRES; 17 27 HIF-1 alpha IRES
769 IRES_Hsp70 RF00495 Cis-reg; IRES; 14 30 Heat shock protein 70 (Hsp70) internal ribosome entry site (IRES)
770 IRES_IGF2 RF00483 Cis-reg; IRES; 9 27 Insulin-like growth factor II IRES
771 IRES_KSHV RF00511 Cis-reg; IRES; 5 1 Kaposi's sarcoma-associated herpesvirus internal ribosome entry site
772 IRES_Kv1_4 RF00447 Cis-reg; IRES; 6 37 Voltage-gated potassium-channel Kv1.4 IRES
773 IRES_L-myc RF00261 Cis-reg; IRES; 11 31 L-myc internal ribosome entry site (IRES)
774 IRES_mnt RF00457 Cis-reg; IRES; 21 33 Mnt IRES
775 IRES_n-myc RF00226 Cis-reg; IRES; 6 62 n-myc internal ribosome entry site (IRES)
776 IRES_Pesti RF00209 Cis-reg; IRES; 25 1 Pestivirus internal ribosome entry site (IRES)
777 IRES_Picorna RF00229 Cis-reg; IRES; 92 9 Picornavirus internal ribosome entry site (IRES)
778 IRES_Picorna_2 RF00210 Cis-reg; IRES; 92 42 Aphthovirus internal ribosome entry site (IRES)
779 IRES_RhPV RF02658 Cis-reg; IRES; 2 0 Rhopalosiphum padi virus 5'UTR internal ribosome entry site
780 IRES_Tobamo RF00225 Cis-reg; IRES; 7 1 Tobamovirus internal ribosome entry site (IRES)
781 IRES_TrkB RF00547 Cis-reg; IRES; 16 42 TrkB IRES
782 IRES_VEGF_A RF00461 Cis-reg; IRES; 7 24 Vascular endothelial growth factor (VEGF) IRES A
783 IRE_I RF00037 Cis-reg; 61 1,820 Iron response element I
784 IRE_II RF02253 Cis-reg; 29 1,173 Iron response element II
785 IR_84 RF02861 Gene; sRNA; 3 11 Neisseria sRNA 84
786 IS009 RF02111 Gene; 11 12 IS009
787 IS102 RF00124 Gene; sRNA; 5 4 IS102 RNA
788 IS1222_FSE RF00383 Cis-reg; frameshift_element; 5 95 Insertion sequence IS1222 ribosomal frameshifting element
789 IS128 RF00125 Gene; sRNA; 5 2 IS128 RNA
790 IS605-orfB-I RF03065 Gene; sRNA; 259 1 IS605-orfB-I RNA
791 IS605-orfB-II RF02998 Gene; sRNA; 56 0 IS605-orfB-II RNA
792 iscRS RF01517 Cis-reg; 4 36 iscR stability element
793 IscS1_thermometer RF02783 Cis-reg; thermoregulator; 5 31 IscS-1 ICR thermometer
794 isrA RF01385 Gene; sRNA; 10 38 isrA Hfq binding RNA
795 isrB RF01386 Gene; sRNA; 3 7 isrB Hfq binding RNA
796 isrC RF01387 Gene; sRNA; 16 15 isrC Hfq binding RNA
797 isrD RF01388 Gene; sRNA; 2 5 isrD Hfq binding RNA
798 isrF RF01389 Gene; sRNA; 3 4 isrF Hfq binding RNA
799 isrG RF01390 Gene; sRNA; 5 129 isrG Hfq binding RNA
800 isrH RF01391 Gene; sRNA; 6 5 isrH Hfq binding RNA
801 isrI RF01392 Gene; sRNA; 30 9 isrI Hfq binding RNA
802 isrJ RF01393 Gene; sRNA; 5 7 isrJ Hfq binding RNA
803 isrK RF01394 Gene; sRNA; 52 385 isrK Hfq binding RNA
804 isrL RF01395 Gene; sRNA; 4 16 isrL Hfq binding RNA
805 IsrM RF02763 Gene; sRNA; 2 1 IsrM sRNA
806 isrN RF01396 Gene; sRNA; 17 123 isrN Hfq binding RNA
807 isrO RF01397 Gene; sRNA; 6 16 isrO Hfq binding RNA
808 isrP RF01398 Gene; sRNA; 7 4 isrP Hfq binding RNA
809 isrQ RF01399 Gene; sRNA; 6 5 isrQ Hfq binding RNA
810 IsrR RF01419 Gene; antisense; 308 1,126 Antisense RNA which regulates isiA expression
811 istR RF01400 Gene; antitoxin; 7 32 istR Hfq binding RNA
812 ivy-DE RF02999 Cis-reg; 248 56 ivy-DE RNA
813 JA01 RF02729 Gene; sRNA; 3 1 Aggregatibacter sRNA JA01
814 JA02 RF02730 Gene; sRNA; 4 2 Aggregatibacter sRNA JA02
815 JA03 RF02731 Gene; sRNA; 3 13 Aggregatibacter sRNA JA03
816 JA04 RF02732 Gene; sRNA; 6 14 Aggregatibacter sRNA JA04
817 JEV_hairpin RF00465 Cis-reg; 20 0 Japanese encephalitis virus (JEV) hairpin structure
818 JPX_1 RF02124 Gene; lncRNA; 14 34 JPX transcript, XIST activator conserved region 1
819 JPX_2 RF02125 Gene; lncRNA; 11 23 JPX transcript, XIST activator conserved region 2
820 JUMPstart RF01707 Cis-reg; 128 271 JUMPstart RNA
821 K10_TLS RF00207 Cis-reg; 5 10 K10 transport/localisation element (TLS)
822 KatA_thermometer RF02774 Cis-reg; thermoregulator; 5 2 KatA 5' UTR thermometer
823 KCNQ1OT1_1 RF01946 Gene; lncRNA; 8 34 KCNQ1 overlapping transcript 1 conserved region 1
824 KCNQ1OT1_2 RF01947 Gene; lncRNA; 18 33 KCNQ1 overlapping transcript 1 conserved region 2
825 KCNQ1OT1_3 RF01948 Gene; lncRNA; 9 31 KCNQ1 overlapping transcript 1 conserved region 3
826 KCNQ1OT1_5 RF01950 Gene; lncRNA; 15 33 KCNQ1 overlapping transcript 1 conserved region 5
827 KDPG-aldolase RF03115 Gene; sRNA; 43 14 KDPG-aldolase RNA
828 KRAS_3UTR RF02584 Cis-reg; 2 29 KRAS 3' UTR cis-regulatory element
829 K_chan_RES RF00485 Cis-reg; 85 2,986 Potassium channel RNA editing signal
830 L10_leader RF00557 Cis-reg; leader; 97 1,615 Ribosomal protein L10 leader
831 L13_leader RF00555 Cis-reg; leader; 26 267 Ribosomal protein L13 leader
832 L17DE RF01708 Cis-reg; 52 153 L17 ribosomal protein downstream element
833 L19_leader RF00556 Cis-reg; leader; 10 166 Ribosomal protein L19 leader
834 L20_leader RF00558 Cis-reg; leader; 43 770 Ribosomal protein L20 leader
835 L21_leader RF00559 Cis-reg; leader; 38 635 Ribosomal protein L21 leader
836 lactis-plasmid RF01742 Gene; sRNA; 14 7 lactis-plasmid RNA
837 Lacto-phage-1 RF03004 Gene; sRNA; 9 1 Lacto-phage-1 RNA
838 Lacto-rpoB RF01709 Cis-reg; 31 76 Lacto-rpoB RNA
839 Lacto-usp RF01710 Gene; sRNA; 6 20 Lacto-usp RNA
840 LAGLIDADG-2 RF03094 Gene; sRNA; 25 0 LAGLIDADG-2 RNA
841 Lambda_thermo RF01804 Cis-reg; thermoregulator; 5 21 Lambda phage CIII thermoregulator element
842 LasI_thermometer RF02759 Cis-reg; thermoregulator; 3 1 LasI 5' UTR ROSE like thermometer
843 LcrF_thermometer RF02704 Cis-reg; thermoregulator; 2 1 LcrF intergenic thermometer
844 LDH1_5p_UTR RF02697 Cis-reg; 4 2 LDH1 5'UTR
845 let-7 RF00027 Gene; miRNA; 63 1,450 let-7 microRNA precursor
846 leu-phe_leader RF01743 Cis-reg; leader; 9 7 leu/phe leader RNA from Lactococcus
847 leuA-Halobacteria RF03001 Cis-reg; 152 59 leuA-Halobacteria RNA
848 Leu_leader RF00512 Cis-reg; leader; 6 112 Leucine operon leader
849 LhrA RF00615 Gene; sRNA; 10 7 Listeria Hfq binding LhrA
850 LhrC RF00616 Gene; sRNA; 12 16 Listeria LhrC
851 Lig_thermometer RF02815 Cis-reg; thermoregulator; 2 3 Lig 5' UTR thermometer
852 lin-4 RF00052 Gene; miRNA; 12 366 lin-4 microRNA precursor
853 LINC00901 RF01884 Gene; lncRNA; 30 179 Non-coding RNA BC040587
854 lincRNA-p21_1 RF01889 Gene; lncRNA; 2 6 LincRNA-p21 conserved region 1
855 lincRNA-p21_2 RF01890 Gene; lncRNA; 2 3 LincRNA-p21 conserved region 2
856 livK RF01744 Cis-reg; 8 18 livK RNA
857 LLnc147 RF02573 Gene; sRNA; 2 2 Lactococcus lactis non-coding RNA 147
858 Lnt RF01711 Cis-reg; 10 11 Lnt RNA
859 LOOT RF03000 Gene; sRNA; 368 330 LOOT RNA
860 LPR10 RF02824 Gene; sRNA; 3 9 Legionella RNA 10
861 LPR17 RF02825 Gene; sRNA; 2 8 Legionella RNA 17
862 LPR69 RF02823 Gene; sRNA; 5 136 Legionella RNA 69
863 Lst_thermometer RF02810 Cis-reg; thermoregulator; 2 2 Lst 5' UTR thermometer
864 LSU_rRNA_archaea RF02540 Gene; rRNA; 91 1,448 Archaeal large subunit ribosomal RNA
865 LSU_rRNA_bacteria RF02541 Gene; rRNA; 102 25,481 Bacterial large subunit ribosomal RNA
866 LSU_rRNA_eukarya RF02543 Gene; rRNA; 88 32,180 Eukaryotic large subunit ribosomal RNA
867 LSU_trypano_mito RF02546 Gene; rRNA; 6 13 Trypanosomatid mitochondrial large subunit ribosomal RNA
868 lsy-6 RF00823 Gene; miRNA; 4 6 microRNA lsy-6
869 Lysine RF00168 Cis-reg; riboswitch; 47 2,214 Lysine riboswitch
870 lysM-Actino RF03090 Cis-reg; 56 2 lysM-Actino RNA
871 lysM-Prevotella RF03002 Cis-reg; 47 3 lysM-Prevotella RNA
872 lysM-TM7 RF03005 Cis-reg; 129 9 lysM-TM7 RNA
873 M23 RF03006 Gene; sRNA; 31 5 M23 RNA
874 Mahella-1 RF03007 Gene; sRNA; 19 7 Mahella-1 RNA
875 MALAT1 RF01871 Gene; lncRNA; 17 39 Metastasis associated lung adenocarcinoma transcript 1
876 malK-I RF03069 Cis-reg; 322 27 malK-I RNA
877 malK-II RF03008 Cis-reg; 94 20 malK-II RNA
878 malK-III RF03009 Cis-reg; 39 3 malK-III RNA
879 manA RF01745 Cis-reg; 189 20 manA RNA
880 ManX_thermometer RF02781 Cis-reg; thermoregulator; 4 3 ManX 5' UTR thermometer
881 mascRNA-menRNA RF01684 Gene; 53 260 MALAT1-associated small cytoplasmic RNA/MEN beta RNA
882 MAT2A_A RF02260 Cis-reg; 20 96 MAT2A 3'UTR stem loop A
883 MAT2A_B RF02261 Cis-reg; 28 66 MAT2A 3'UTR stem loop B
884 MAT2A_C RF02262 Cis-reg; 18 75 MAT2A 3'UTR stem loop C
885 MAT2A_D RF02263 Cis-reg; 35 107 MAT2A 3'UTR stem loop D
886 MAT2A_E RF02264 Cis-reg; 28 82 MAT2A 3'UTR stem loop E
887 MAT2A_F RF02265 Cis-reg; 26 92 MAT2A 3'UTR stem loop F
888 McaS RF00115 Gene; sRNA; 4 13 McaS/IsrA RNA
889 Mcr7 RF02571 Gene; sRNA; 2 1 mcr7 sRNA
890 mcrA RF03010 Gene; sRNA; 16 6 mcrA RNA
891 MCS4 RF02713 Gene; sRNA; 5 6 Mycoplasma sRNA MCS4
892 MDR-NUDIX RF02918 Cis-reg; 15 9 MDR-NUDIX RNA
893 MEG3_2 RF01872 Gene; lncRNA; 16 37 Maternally expressed 3 conserved region 2
894 MEG8_1 RF02145 Gene; lncRNA; 23 37 Maternally expressed 8 exon 1
895 MEG8_2 RF02146 Gene; lncRNA; 12 26 Maternally expressed 8 exon 2
896 MEG8_3 RF02147 Gene; lncRNA; 10 30 Maternally expressed 8 exon 3
897 MESTIT1_1 RF02148 Gene; lncRNA; 16 33 MEST intronic transcript 1, antisense RNA conserved region 1
898 MESTIT1_2 RF02149 Gene; lncRNA; 16 37 MEST intronic transcript 1, antisense RNA conserved region 2
899 MESTIT1_3 RF02150 Gene; lncRNA; 18 34 MEST intronic transcript 1, antisense RNA conserved region 3
900 Metazoa_SRP RF00017 Gene; 91 42,386 Metazoan signal recognition particle RNA
901 Methylobacterium-1 RF01712 Gene; sRNA; 34 13 Methylobacterium-1 RNA
902 Methylophilales-1 RF03011 Gene; sRNA; 14 11 Methylophilales-1 RNA
903 Methylosinus-1 RF03108 Gene; sRNA; 12 8 Methylosinus-1 RNA
904 MFR RF01510 Cis-reg; riboswitch; 3 15 M. florum riboswitch
905 mgtC_leader RF02887 Cis-reg; leader; 4 26 Salmonella mgtC leader RNA
906 Mg_sensor RF01056 Cis-reg; riboswitch; 4 38 Magnesium Sensor
907 MH_s10 RF02879 Gene; sRNA; 3 11 Mesorhizobail RNA 10
908 MH_s15 RF02880 Gene; sRNA; 2 5 Mesorhizobail RNA 15
909 MH_s25 RF02881 Gene; sRNA; 2 5 Mesorhizobail RNA 25
910 MH_s36 RF02882 Gene; sRNA; 2 10 Mesorhizobail RNA 36
911 MH_s7 RF02878 Gene; sRNA; 3 13 Mesorhizobail RNA 7
912 MIAT_exon1 RF01874 Gene; lncRNA; 10 33 Myocardial infarction associated transcript exon 1
913 MIAT_exon5_1 RF01875 Gene; lncRNA; 9 36 Myocardial infarction associated transcript exon 5 conserved region 1
914 MIAT_exon5_2 RF01876 Gene; lncRNA; 10 37 Myocardial infarction associated transcript exon 5 conserved region 2
915 MIAT_exon5_3 RF01877 Gene; lncRNA; 16 37 Myocardial infarction associated transcript exon 5 conserved region 3
916 MicA RF00078 Gene; sRNA; 17 119 MicA sRNA
917 MicC RF00121 Gene; sRNA; 8 24 MicC RNA
918 MicF RF00033 Gene; antisense; 4 39 MicF RNA
919 MicL RF02654 Gene; sRNA; 2 35 MicL sRNA
920 Mico1 RF01928 Gene; lncRNA; 3 39 Maternal intergenic circadian oscillating RNA 1
921 MicX RF01808 Gene; sRNA; 10 30 MicX Vibrio cholerae sRNA
922 MIMT1_1 RF02151 Gene; lncRNA; 21 26 MER1 repeat containing imprinted transcript 1 conserved region 1
923 mini-ykkC RF01068 Cis-reg; 72 929 Guanidine-II riboswitch
924 mir-1 RF00103 Gene; miRNA; 66 800 mir-1 microRNA precursor family
925 mir-10 RF00104 Gene; miRNA; 36 1,740 mir-10 microRNA precursor family
926 mir-101 RF00253 Gene; miRNA; 24 218 mir-101 microRNA precursor family
927 mir-1017 RF02517 Gene; miRNA; 7 12 mir-1017 microRNA precursor family
928 mir-103 RF00129 Gene; miRNA; 28 328 mir-103/107 microRNA precursor
929 mir-105 RF00670 Gene; miRNA; 20 109 microRNA mir-105
930 mir-11 RF00813 Gene; miRNA; 15 62 microRNA mir-11
931 mir-1178 RF02014 Gene; miRNA; 3 13 microRNA mir-1178
932 mir-1180 RF02024 Gene; miRNA; 3 11 microRNA mir-1180
933 mir-1183 RF02016 Gene; miRNA; 3 9 microRNA mir-1183
934 mir-12 RF00751 Gene; miRNA; 7 46 microRNA mir-12
935 mir-1207 RF02018 Gene; miRNA; 3 9 microRNA mir-1207
936 mir-1208 RF02023 Gene; miRNA; 3 8 microRNA mir-1208
937 mir-122 RF00684 Gene; miRNA; 26 114 mir-122 microRNA precursor
938 mir-1224 RF00942 Gene; miRNA; 11 36 microRNA mir-1224
939 mir-1225 RF00946 Gene; miRNA; 7 36 microRNA mir-1225
940 mir-1226 RF00945 Gene; miRNA; 2 11 microRNA mir-1226
941 mir-1227 RF01314 Gene; miRNA; 3 9 microRNA mir-1227
942 mir-1237 RF02007 Gene; miRNA; 3 10 microRNA mir-1237
943 mir-124 RF00239 Gene; miRNA; 56 546 mir-124 microRNA precursor family
944 mir-1249 RF01918 Gene; miRNA; 4 36 microRNA mir-1249
945 mir-1251 RF01938 Gene; miRNA; 4 38 microRNA mir-1251
946 mir-1253 RF02006 Gene; miRNA; 2 8 microRNA mir-1253
947 mir-1255 RF00994 Gene; miRNA; 10 14,455 microRNA mir-1255
948 mir-126 RF00701 Gene; miRNA; 12 110 microRNA mir-126
949 mir-1265 RF02019 Gene; miRNA; 3 9 microRNA mir-1265
950 mir-127 RF00676 Gene; miRNA; 5 38 microRNA mir-127
951 mir-1275 RF02022 Gene; miRNA; 6 16 microRNA mir-1275
952 mir-128 RF00649 Gene; miRNA; 18 213 microRNA mir-128
953 mir-1280 RF02013 Gene; miRNA; 3 9 microRNA mir-1280
954 mir-1287 RF02015 Gene; miRNA; 3 74 microRNA mir-1287
955 mir-129 RF00486 Gene; miRNA; 6 171 mir-129 microRNA precursor family
956 mir-1296 RF01921 Gene; miRNA; 6 30 microRNA mir-1296
957 mir-130 RF00258 Gene; miRNA; 9 117 mir-130 microRNA precursor family
958 mir-1302 RF00951 Gene; miRNA; 24 3,551 microRNA mir-1302
959 mir-1306 RF01014 Gene; miRNA; 8 113 microRNA mir-1306
960 mir-1307 RF01038 Gene; miRNA; 7 26 microRNA mir-1307
961 mir-132 RF00662 Gene; miRNA; 22 141 microRNA mir-132
962 mir-133 RF00446 Gene; miRNA; 46 692 mir-133 microRNA precursor family
963 mir-134 RF00699 Gene; miRNA; 6 34 microRNA mir-134
964 mir-135 RF00246 Gene; miRNA; 32 343 mir-135 microRNA precursor family
965 mir-136 RF00687 Gene; miRNA; 2 37 microRNA mir-136
966 mir-137 RF00694 Gene; miRNA; 28 223 microRNA mir-137
967 mir-138 RF00671 Gene; miRNA; 24 209 microRNA mir-138
968 mir-1388 RF01945 Gene; miRNA; 4 84 microRNA mir-1388
969 mir-139 RF00703 Gene; miRNA; 5 80 microRNA mir-139
970 mir-14 RF00752 Gene; miRNA; 6 33 microRNA mir-14
971 mir-140 RF00678 Gene; miRNA; 14 93 microRNA mir-140
972 mir-1419 RF01919 Gene; miRNA; 5 13 microRNA mir-1419
973 mir-142 RF01896 Gene; miRNA; 13 122 microRNA mir-142
974 mir-143 RF00683 Gene; miRNA; 18 106 microRNA mir-143
975 mir-144 RF00682 Gene; miRNA; 22 77 microRNA mir-144
976 mir-145 RF00675 Gene; miRNA; 13 100 microRNA mir-145
977 mir-146 RF00691 Gene; miRNA; 33 259 microRNA mir-146
978 mir-147 RF00693 Gene; miRNA; 64 212 microRNA mir-147
979 mir-1473 RF00993 Gene; miRNA; 2 3 microRNA mir-1473
980 mir-148 RF00248 Gene; miRNA; 5 190 mir-148/mir-152 microRNA precursor family
981 mir-149 RF00829 Gene; miRNA; 3 34 microRNA mir-149
982 mir-1497 RF00953 Gene; miRNA; 2 3 microRNA mir-1497
983 mir-15 RF00455 Gene; miRNA; 17 314 mir-15 microRNA precursor family
984 mir-150 RF00767 Gene; miRNA; 17 41 microRNA mir-150
985 mir-153 RF00650 Gene; miRNA; 18 222 microRNA mir-153
986 mir-154 RF00641 Gene; miRNA; 121 1,180 microRNA mir-154
987 mir-155 RF00731 Gene; miRNA; 17 110 microRNA mir-155
988 mir-156 RF00073 Gene; miRNA; 10 476 mir-156 microRNA precursor
989 mir-16 RF00254 Gene; miRNA; 12 510 mir-16 microRNA precursor family
990 mir-160 RF00247 Gene; miRNA; 7 512 mir-160 microRNA precursor family
991 mir-166 RF00075 Gene; miRNA; 31 887 mir-166 microRNA precursor
992 mir-1662 RF02097 Gene; miRNA; 2 55 mir-1662 microRNA precursor
993 mir-17 RF00051 Gene; miRNA; 54 549 mir-17 microRNA precursor family
994 mir-172 RF00452 Gene; miRNA; 11 643 mir-172 microRNA precursor family
995 mir-1803 RF02094 Gene; miRNA; 6 859 mir-1803 microRNA precursor
996 mir-181 RF00076 Gene; miRNA; 19 305 mir-181 microRNA precursor
997 mir-182 RF00702 Gene; miRNA; 17 91 microRNA mir-182
998 mir-1827 RF02028 Gene; miRNA; 6 17 microRNA mir-1827
999 mir-1829 RF00955 Gene; miRNA; 3 6 microRNA mir-1829
1000 mir-183 RF00663 Gene; miRNA; 16 105 microRNA mir-183
1001 mir-184 RF00657 Gene; miRNA; 32 198 microRNA mir-184
1002 mir-185 RF00771 Gene; miRNA; 5 33 microRNA mir-185
1003 mir-186 RF00697 Gene; miRNA; 19 257 microRNA mir-186
1004 mir-187 RF00674 Gene; miRNA; 20 105 microRNA mir-187
1005 mir-188 RF01897 Gene; miRNA; 14 100 microRNA mir-188
1006 mir-19 RF00245 Gene; miRNA; 46 338 mir-19 microRNA precursor family
1007 mir-190 RF00672 Gene; miRNA; 29 287 microRNA mir-190
1008 mir-191 RF00764 Gene; miRNA; 5 63 microRNA mir-191
1009 mir-1912 RF02017 Gene; miRNA; 13 32 microRNA mir-1912
1010 mir-192 RF00130 Gene; miRNA; 41 155 mir-192/215 microRNA precursor
1011 mir-193 RF01895 Gene; miRNA; 17 170 microRNA mir-193
1012 mir-1937 RF01942 Gene; miRNA; 171 3,680 microRNA mir-1937
1013 mir-194 RF00257 Gene; miRNA; 29 203 mir-194 microRNA precursor family
1014 mir-196 RF00256 Gene; miRNA; 14 275 mir-196 microRNA precursor family
1015 mir-197 RF00707 Gene; miRNA; 5 28 microRNA mir-197
1016 mir-198 RF00681 Gene; miRNA; 3 9 microRNA mir-198
1017 mir-199 RF00144 Gene; miRNA; 40 286 mir-199 microRNA precursor
1018 mir-2 RF00047 Gene; miRNA; 56 459 mir-2 microRNA precursor
1019 mir-202 RF00705 Gene; miRNA; 13 103 microRNA mir-202
1020 mir-2024 RF01900 Gene; miRNA; 7 16 microRNA mir-2024
1021 mir-203 RF00696 Gene; miRNA; 10 69 microRNA mir-203
1022 mir-204 RF00646 Gene; miRNA; 32 237 microRNA mir-204
1023 mir-205 RF00656 Gene; miRNA; 29 168 microRNA mir-205
1024 mir-207 RF00802 Gene; miRNA; 6 25 microRNA mir-207
1025 mir-208 RF00749 Gene; miRNA; 17 97 microRNA mir-208
1026 mir-21 RF00658 Gene; miRNA; 11 121 microRNA mir-21
1027 mir-210 RF00679 Gene; miRNA; 26 165 microRNA mir-210
1028 mir-214 RF00660 Gene; miRNA; 8 297 microRNA mir-214
1029 mir-216 RF00654 Gene; miRNA; 33 214 microRNA mir-216
1030 mir-217 RF00673 Gene; miRNA; 27 113 microRNA mir-217
1031 mir-218 RF00255 Gene; miRNA; 18 224 mir-218 microRNA precursor family
1032 mir-219 RF00251 Gene; miRNA; 13 297 mir-219 microRNA precursor family
1033 mir-22 RF00653 Gene; miRNA; 12 127 microRNA mir-22
1034 mir-221 RF00651 Gene; miRNA; 47 270 microRNA mir-221
1035 mir-223 RF00664 Gene; miRNA; 19 107 microRNA mir-223
1036 mir-2238 RF01915 Gene; miRNA; 4 13 microRNA mir-2238
1037 mir-224 RF00680 Gene; miRNA; 5 38 microRNA mir-224
1038 mir-2241 RF01899 Gene; miRNA; 10 15 microRNA mir-2241
1039 mir-228 RF00843 Gene; miRNA; 4 11 microRNA mir-228
1040 mir-23 RF00642 Gene; miRNA; 22 218 microRNA mir-23
1041 mir-230 RF00851 Gene; miRNA; 2 6 microRNA mir-230
1042 mir-231 RF00852 Gene; miRNA; 4 6 microRNA mir-231
1043 mir-232 RF00856 Gene; miRNA; 3 9 microRNA mir-232
1044 mir-233 RF00857 Gene; miRNA; 4 273 microRNA mir-233
1045 mir-234 RF00859 Gene; miRNA; 4 5 microRNA mir-234
1046 mir-235 RF00899 Gene; miRNA; 2 7 microRNA mir-235
1047 mir-239 RF00713 Gene; miRNA; 9 16 microRNA mir-239
1048 mir-24 RF00178 Gene; miRNA; 17 188 mir-24 microRNA precursor family
1049 mir-240 RF00804 Gene; miRNA; 3 16 microRNA mir-240
1050 mir-241 RF00809 Gene; miRNA; 4 7 microRNA mir-241
1051 mir-242 RF00898 Gene; miRNA; 2 28 microRNA mir-242
1052 mir-244 RF00815 Gene; miRNA; 4 7 microRNA mir-244
1053 mir-245 RF00816 Gene; miRNA; 3 8 microRNA mir-245
1054 mir-246 RF00819 Gene; miRNA; 4 7 microRNA mir-246
1055 mir-248 RF00820 Gene; miRNA; 4 6 microRNA mir-248
1056 mir-249 RF00821 Gene; miRNA; 4 5 microRNA mir-249
1057 mir-2494 RF02518 Gene; miRNA; 10 5 mir-2494 microRNA precursor family
1058 mir-25 RF02020 Gene; miRNA; 3 53 microRNA mir-25
1059 mir-250 RF00836 Gene; miRNA; 4 7 microRNA mir-250
1060 mir-251 RF00837 Gene; miRNA; 4 6 microRNA mir-251
1061 mir-2518 RF01944 Gene; miRNA; 4 57 microRNA mir-2518
1062 mir-252 RF00838 Gene; miRNA; 10 132 microRNA mir-252
1063 mir-253 RF01064 Gene; miRNA; 4 6 microRNA mir-253
1064 mir-254 RF00855 Gene; miRNA; 4 6 microRNA mir-254
1065 mir-255 RF00900 Gene; miRNA; 2 7 microRNA mir-255
1066 mir-259 RF00850 Gene; miRNA; 4 8 microRNA mir-259
1067 mir-26 RF00244 Gene; miRNA; 5 358 mir-26 microRNA precursor family
1068 mir-263 RF00706 Gene; miRNA; 23 191 microRNA mir-263
1069 mir-268 RF00834 Gene; miRNA; 4 7 microRNA mir-268
1070 mir-27 RF00644 Gene; miRNA; 32 239 microRNA mir-27
1071 mir-274 RF00822 Gene; miRNA; 7 11 microRNA mir-274
1072 mir-275 RF00757 Gene; miRNA; 15 56 microRNA mir-275
1073 mir-276 RF00637 Gene; miRNA; 16 126 microRNA mir-276
1074 mir-277 RF00730 Gene; miRNA; 12 71 microRNA mir-277
1075 mir-2774 RF01924 Gene; miRNA; 4 2,191 microRNA mir-2774
1076 mir-2778 RF01913 Gene; miRNA; 7 21 microRNA mir-2778
1077 mir-278 RF00729 Gene; miRNA; 9 43 microRNA mir-278
1078 mir-2780 RF01937 Gene; miRNA; 4 1,165 microRNA mir-2780
1079 mir-279 RF00754 Gene; miRNA; 12 52 microRNA mir-279
1080 mir-28 RF00655 Gene; miRNA; 29 237 microRNA mir-28
1081 mir-280 RF00801 Gene; miRNA; 8 11 microRNA mir-280
1082 mir-2807 RF01912 Gene; miRNA; 7 1,971 microRNA mir-2807
1083 mir-281 RF00967 Gene; miRNA; 2 3 microRNA mir-281
1084 mir-282 RF00724 Gene; miRNA; 15 111 microRNA mir-282
1085 mir-283 RF00747 Gene; miRNA; 11 58 microRNA mir-283
1086 mir-2833 RF02026 Gene; miRNA; 5 15 microRNA mir-2833
1087 mir-284 RF01901 Gene; miRNA; 10 11 microRNA mir-284
1088 mir-286 RF00789 Gene; miRNA; 14 383 microRNA mir-286
1089 mir-287 RF00788 Gene; miRNA; 9 10 microRNA mir-287
1090 mir-288 RF00787 Gene; miRNA; 7 11 microRNA mir-288
1091 mir-289 RF00786 Gene; miRNA; 3 11 microRNA mir-289
1092 mir-29 RF00074 Gene; miRNA; 10 505 mir-29 microRNA precursor
1093 mir-290 RF00665 Gene; miRNA; 27 342 microRNA mir-290
1094 mir-296 RF00733 Gene; miRNA; 12 33 microRNA mir-296
1095 mir-2968 RF02093 Gene; miRNA; 12 55 mir-2968 microRNA precursor
1096 mir-2970 RF02092 Gene; miRNA; 5 34 mir-2970 microRNA precursor
1097 mir-2973 RF02096 Gene; miRNA; 7 1,821 mir-2973 microRNA precursor
1098 mir-298 RF00773 Gene; miRNA; 5 15 microRNA mir-298
1099 mir-2985-2 RF02095 Gene; miRNA; 20 348 mir-2985-2 microRNA precursor
1100 mir-299 RF00756 Gene; miRNA; 6 67 microRNA mir-299
1101 mir-3 RF00716 Gene; miRNA; 11 44 microRNA mir-3
1102 mir-30 RF00131 Gene; miRNA; 49 640 mir-30 microRNA precursor
1103 mir-301 RF02061 Gene; miRNA; 17 228 microRNA mir-301
1104 mir-3017 RF02025 Gene; miRNA; 36 43 microRNA mir-3017
1105 mir-302 RF00668 Gene; miRNA; 44 387 microRNA mir-302
1106 mir-304 RF00853 Gene; miRNA; 5 8 microRNA mir-304
1107 mir-305 RF00732 Gene; miRNA; 14 79 microRNA mir-305
1108 mir-306 RF00858 Gene; miRNA; 7 11 microRNA mir-306
1109 mir-308 RF00743 Gene; miRNA; 11 65 microRNA mir-308
1110 mir-31 RF00661 Gene; miRNA; 28 169 microRNA mir-31
1111 mir-314 RF00807 Gene; miRNA; 6 14 microRNA mir-314
1112 mir-315 RF00717 Gene; miRNA; 16 75 microRNA mir-315
1113 mir-316 RF00814 Gene; miRNA; 4 10 microRNA mir-316
1114 mir-317 RF00720 Gene; miRNA; 12 65 microRNA mir-317
1115 mir-3179 RF02021 Gene; miRNA; 3 11 microRNA mir-3179
1116 mir-318 RF00818 Gene; miRNA; 5 13 microRNA mir-318
1117 mir-3180 RF02010 Gene; miRNA; 3 15 microRNA mir-3180
1118 mir-32 RF00666 Gene; miRNA; 8 95 microRNA mir-32
1119 mir-320 RF00736 Gene; miRNA; 55 209 microRNA mir-320
1120 mir-322 RF00737 Gene; miRNA; 11 32 microRNA mir-322
1121 mir-326 RF00719 Gene; miRNA; 7 35 microRNA mir-326
1122 mir-327 RF00940 Gene; miRNA; 2 19 microRNA mir-327
1123 mir-328 RF00772 Gene; miRNA; 13 35 microRNA mir-328
1124 mir-33 RF00667 Gene; miRNA; 50 260 microRNA mir-33
1125 mir-330 RF00770 Gene; miRNA; 6 33 microRNA mir-330
1126 mir-331 RF00769 Gene; miRNA; 5 38 microRNA mir-331
1127 mir-335 RF00766 Gene; miRNA; 9 37 microRNA mir-335
1128 mir-337 RF00765 Gene; miRNA; 6 32 microRNA mir-337
1129 mir-338 RF00686 Gene; miRNA; 21 161 microRNA mir-338
1130 mir-339 RF00763 Gene; miRNA; 14 33 microRNA mir-339
1131 mir-34 RF00456 Gene; miRNA; 18 266 mir-34 microRNA precursor family
1132 mir-340 RF00761 Gene; miRNA; 31 98 microRNA mir-340
1133 mir-342 RF00760 Gene; miRNA; 10 35 microRNA mir-342
1134 mir-344 RF00825 Gene; miRNA; 35 161 microRNA mir-344
1135 mir-345 RF01044 Gene; miRNA; 10 34 microRNA mir-345
1136 mir-346 RF00758 Gene; miRNA; 5 34 microRNA mir-346
1137 mir-35 RF02254 Gene; miRNA; 2 3 microRNA mir-35
1138 mir-350 RF00806 Gene; miRNA; 11 35 microRNA mir-350
1139 mir-351 RF00805 Gene; miRNA; 2 1 microRNA mir-351
1140 mir-353 RF00800 Gene; miRNA; 4 7 microRNA mir-353
1141 mir-354 RF00799 Gene; miRNA; 4 7 microRNA mir-354
1142 mir-355 RF00797 Gene; miRNA; 4 7 microRNA mir-355
1143 mir-357 RF00791 Gene; miRNA; 5 6 microRNA mir-357
1144 mir-358 RF00790 Gene; miRNA; 3 4 microRNA mir-358
1145 mir-359 RF00903 Gene; miRNA; 2 5 microRNA mir-359
1146 mir-36 RF00685 Gene; miRNA; 46 84 microRNA mir-36
1147 mir-360 RF00774 Gene; miRNA; 5 6 microRNA mir-360
1148 mir-361 RF00744 Gene; miRNA; 5 34 microRNA mir-361
1149 mir-363 RF01898 Gene; miRNA; 7 88 microRNA mir-363
1150 mir-365 RF00659 Gene; miRNA; 9 215 microRNA mir-365
1151 mir-367 RF00735 Gene; miRNA; 13 93 microRNA mir-367
1152 mir-370 RF00740 Gene; miRNA; 6 36 microRNA mir-370
1153 mir-374 RF00840 Gene; miRNA; 13 57 microRNA mir-374
1154 mir-375 RF00700 Gene; miRNA; 9 100 microRNA mir-375
1155 mir-378 RF00741 Gene; miRNA; 8 36 microRNA mir-378
1156 mir-383 RF00715 Gene; miRNA; 6 98 microRNA mir-383
1157 mir-384 RF00841 Gene; miRNA; 16 77 microRNA mir-384
1158 mir-392 RF00904 Gene; miRNA; 3 3 microRNA mir-392
1159 mir-393 RF02516 Gene; miRNA; 27 363 mir-393 microRNA precursor family
1160 mir-395 RF00451 Gene; miRNA; 25 1,064 mir-395 microRNA precursor family
1161 mir-399 RF00445 Gene; miRNA; 13 818 mir-399 microRNA precursor family
1162 mir-412 RF00762 Gene; miRNA; 9 32 microRNA mir-412
1163 mir-42 RF00794 Gene; miRNA; 5 4 microRNA mir-42
1164 mir-422 RF01030 Gene; miRNA; 3 9 microRNA mir-422
1165 mir-423 RF00870 Gene; miRNA; 4 38 microRNA mir-423
1166 mir-425 RF00803 Gene; miRNA; 5 69 microRNA mir-425
1167 mir-43 RF00795 Gene; miRNA; 4 7 microRNA mir-43
1168 miR-430 RF01413 Gene; miRNA; 46 797 microRNA miR-430
1169 mir-431 RF00718 Gene; miRNA; 9 35 microRNA mir-431
1170 mir-432 RF00775 Gene; miRNA; 6 42 microRNA mir-432
1171 mir-433 RF00748 Gene; miRNA; 5 38 microRNA mir-433
1172 mir-434 RF00941 Gene; miRNA; 2 3 microRNA mir-434
1173 mir-44 RF00710 Gene; miRNA; 6 15 microRNA mir-44
1174 mir-448 RF00723 Gene; miRNA; 19 66 microRNA mir-448
1175 mir-449 RF00711 Gene; miRNA; 56 402 microRNA mir-449
1176 mir-450 RF00708 Gene; miRNA; 21 96 microRNA mir-450
1177 mir-451 RF00722 Gene; miRNA; 19 115 microRNA mir-451
1178 mir-452 RF00839 Gene; miRNA; 4 33 microRNA mir-452
1179 mir-454 RF00746 Gene; miRNA; 17 106 microRNA mir-454
1180 mir-455 RF00709 Gene; miRNA; 5 240 microRNA mir-455
1181 mir-456 RF00878 Gene; miRNA; 5 68 microRNA mir-456
1182 mir-458 RF00750 Gene; miRNA; 7 73 microRNA mir-458
1183 mir-46 RF00249 Gene; miRNA; 11 149 mir-46/mir-47/mir-281 microRNA precursor family
1184 mir-460 RF00712 Gene; miRNA; 8 69 microRNA mir-460
1185 mir-463 RF00934 Gene; miRNA; 2 2 microRNA mir-463
1186 mir-471 RF00932 Gene; miRNA; 2 2 microRNA mir-471
1187 mir-48 RF00796 Gene; miRNA; 4 6 microRNA mir-48
1188 mir-484 RF00783 Gene; miRNA; 15 35 microRNA mir-484
1189 mir-486 RF00784 Gene; miRNA; 12 31 microRNA mir-486
1190 mir-488 RF00861 Gene; miRNA; 5 35 microRNA mir-488
1191 mir-489 RF00698 Gene; miRNA; 19 105 microRNA mir-489
1192 mir-49 RF00798 Gene; miRNA; 4 6 microRNA mir-49
1193 mir-490 RF00792 Gene; miRNA; 19 95 microRNA mir-490
1194 mir-491 RF00862 Gene; miRNA; 5 35 microRNA mir-491
1195 mir-492 RF00989 Gene; miRNA; 14 73 microRNA mir-492
1196 mir-497 RF00793 Gene; miRNA; 8 38 microRNA mir-497
1197 mir-498 RF00958 Gene; miRNA; 5 10 microRNA mir-498
1198 mir-499 RF00745 Gene; miRNA; 19 110 microRNA mir-499
1199 mir-5 RF00854 Gene; miRNA; 6 15 microRNA mir-5
1200 mir-50 RF00824 Gene; miRNA; 5 41 microRNA mir-50
1201 mir-500 RF01903 Gene; miRNA; 26 157 microRNA mir-500
1202 mir-503 RF00753 Gene; miRNA; 14 32 microRNA mir-503
1203 mir-504 RF00939 Gene; miRNA; 6 35 microRNA mir-504
1204 mir-505 RF00781 Gene; miRNA; 5 35 microRNA mir-505
1205 mir-506 RF01910 Gene; miRNA; 8 18 microRNA mir-506
1206 mir-515 RF00639 Gene; miRNA; 40 738 microRNA mir-515
1207 mir-52 RF00734 Gene; miRNA; 5 9 microRNA mir-52
1208 mir-540 RF00776 Gene; miRNA; 2 7 microRNA mir-540
1209 mir-541 RF00777 Gene; miRNA; 10 33 microRNA mir-541
1210 mir-542 RF00755 Gene; miRNA; 5 32 microRNA mir-542
1211 mir-544 RF01045 Gene; miRNA; 24 2,823 microRNA mir-544
1212 mir-548 RF01061 Gene; miRNA; 11 943 microRNA mir-548
1213 mir-549 RF00965 Gene; miRNA; 2 8 microRNA mir-549
1214 mir-55 RF00826 Gene; miRNA; 5 5 microRNA mir-55
1215 mir-550 RF00873 Gene; miRNA; 3 17 microRNA mir-550
1216 mir-551 RF00892 Gene; miRNA; 20 151 microRNA mir-551
1217 mir-552 RF00990 Gene; miRNA; 2 9 microRNA mir-552
1218 mir-553 RF00979 Gene; miRNA; 3 8 microRNA mir-553
1219 mir-554 RF01032 Gene; miRNA; 4 19 microRNA mir-554
1220 mir-556 RF00969 Gene; miRNA; 2 9 microRNA mir-556
1221 mir-557 RF01004 Gene; miRNA; 2 10 microRNA mir-557
1222 mir-558 RF01021 Gene; miRNA; 3 8 microRNA mir-558
1223 mir-56 RF02214 Gene; miRNA; 4 6 microRNA mir-56
1224 mir-562 RF00998 Gene; miRNA; 14 2,952 microRNA mir-562
1225 mir-563 RF01003 Gene; miRNA; 7 25 microRNA mir-563
1226 mir-567 RF01036 Gene; miRNA; 9 17 microRNA mir-567
1227 mir-569 RF01018 Gene; miRNA; 13 34 microRNA mir-569
1228 mir-572 RF01020 Gene; miRNA; 4 13 microRNA mir-572
1229 mir-573 RF01040 Gene; miRNA; 2 9 microRNA mir-573
1230 mir-574 RF00929 Gene; miRNA; 3 22 microRNA mir-574
1231 mir-575 RF02011 Gene; miRNA; 3 9 microRNA mir-575
1232 mir-576 RF00984 Gene; miRNA; 2 9 microRNA mir-576
1233 mir-577 RF01013 Gene; miRNA; 2 9 microRNA mir-577
1234 mir-578 RF00971 Gene; miRNA; 3 8 microRNA mir-578
1235 mir-58 RF00835 Gene; miRNA; 4 8 microRNA mir-58
1236 mir-580 RF01000 Gene; miRNA; 2 8 microRNA mir-580
1237 mir-581 RF00961 Gene; miRNA; 2 9 microRNA mir-581
1238 mir-582 RF00927 Gene; miRNA; 7 35 microRNA mir-582
1239 mir-583 RF00976 Gene; miRNA; 3 9 microRNA mir-583
1240 mir-584 RF01016 Gene; miRNA; 16 307 microRNA mir-584
1241 mir-586 RF00962 Gene; miRNA; 2 9 microRNA mir-586
1242 mir-589 RF00987 Gene; miRNA; 2 8 microRNA mir-589
1243 mir-590 RF00928 Gene; miRNA; 10 32 microRNA mir-590
1244 mir-592 RF00877 Gene; miRNA; 5 38 microRNA mir-592
1245 mir-593 RF00992 Gene; miRNA; 2 8 microRNA mir-593
1246 mir-597 RF00973 Gene; miRNA; 4 16 microRNA mir-597
1247 mir-598 RF01059 Gene; miRNA; 24 1,729 microRNA mir-598
1248 mir-599 RF00991 Gene; miRNA; 11 81 microRNA mir-599
1249 mir-6 RF00143 Gene; miRNA; 24 31 mir-6 microRNA precursor
1250 mir-60 RF00849 Gene; miRNA; 4 7 microRNA mir-60
1251 mir-600 RF00977 Gene; miRNA; 3 9 microRNA mir-600
1252 mir-601 RF01006 Gene; miRNA; 3 9 microRNA mir-601
1253 mir-604 RF01041 Gene; miRNA; 2 12 microRNA mir-604
1254 mir-605 RF01011 Gene; miRNA; 2 6 microRNA mir-605
1255 mir-607 RF00974 Gene; miRNA; 3 6 microRNA mir-607
1256 mir-609 RF01001 Gene; miRNA; 2 8 microRNA mir-609
1257 mir-61 RF00848 Gene; miRNA; 4 16 microRNA mir-61
1258 mir-611 RF01022 Gene; miRNA; 8 21 microRNA mir-611
1259 mir-612 RF00959 Gene; miRNA; 6 14 microRNA mir-612
1260 mir-615 RF00879 Gene; miRNA; 6 31 microRNA mir-615
1261 mir-616 RF00995 Gene; miRNA; 3 11 microRNA mir-616
1262 mir-618 RF01034 Gene; miRNA; 5 9 microRNA mir-618
1263 mir-62 RF00847 Gene; miRNA; 4 6 microRNA mir-62
1264 mir-621 RF02008 Gene; miRNA; 3 13 microRNA mir-621
1265 mir-624 RF01007 Gene; miRNA; 2 9 microRNA mir-624
1266 mir-626 RF00968 Gene; miRNA; 6 21 microRNA mir-626
1267 mir-628 RF01012 Gene; miRNA; 9 33 microRNA mir-628
1268 mir-63 RF01936 Gene; miRNA; 5 6 microRNA mir-63
1269 mir-631 RF00996 Gene; miRNA; 7 26 microRNA mir-631
1270 mir-632 RF01010 Gene; miRNA; 16 37 microRNA mir-632
1271 mir-633 RF01028 Gene; miRNA; 3 9 microRNA mir-633
1272 mir-636 RF01008 Gene; miRNA; 5 11 microRNA mir-636
1273 mir-638 RF00978 Gene; miRNA; 6 20 microRNA mir-638
1274 mir-639 RF01031 Gene; miRNA; 6 28 microRNA mir-639
1275 mir-64 RF00846 Gene; miRNA; 4 29 microRNA mir-64
1276 mir-640 RF00985 Gene; miRNA; 3 8 microRNA mir-640
1277 mir-642 RF00963 Gene; miRNA; 2 6 microRNA mir-642
1278 mir-643 RF00980 Gene; miRNA; 2 13 microRNA mir-643
1279 mir-644 RF01037 Gene; miRNA; 3 8 microRNA mir-644
1280 mir-648 RF00970 Gene; miRNA; 2 9 microRNA mir-648
1281 mir-649 RF01029 Gene; miRNA; 5 11 microRNA mir-649
1282 mir-650 RF00952 Gene; miRNA; 11 610 microRNA mir-650
1283 mir-651 RF00972 Gene; miRNA; 4 16 microRNA mir-651
1284 mir-652 RF00872 Gene; miRNA; 13 46 microRNA mir-652
1285 mir-653 RF00937 Gene; miRNA; 12 32 microRNA mir-653
1286 mir-654 RF01922 Gene; miRNA; 6 51 microRNA mir-654
1287 mir-657 RF00988 Gene; miRNA; 2 8 microRNA mir-657
1288 mir-661 RF00960 Gene; miRNA; 4 9 microRNA mir-661
1289 mir-662 RF00983 Gene; miRNA; 14 29 microRNA mir-662
1290 mir-663 RF00957 Gene; miRNA; 12 91 microRNA mir-663
1291 mir-665 RF00921 Gene; miRNA; 6 33 microRNA mir-665
1292 mir-668 RF00890 Gene; miRNA; 6 35 microRNA mir-668
1293 mir-67 RF00844 Gene; miRNA; 14 97 microRNA mir-67
1294 mir-671 RF00891 Gene; miRNA; 3 43 microRNA mir-671
1295 mir-672 RF00911 Gene; miRNA; 7 36 microRNA mir-672
1296 mir-673 RF00922 Gene; miRNA; 2 6 microRNA mir-673
1297 mir-674 RF00914 Gene; miRNA; 2 5 microRNA mir-674
1298 mir-675 RF00897 Gene; miRNA; 11 27 microRNA mir-675
1299 mir-676 RF00966 Gene; miRNA; 6 36 microRNA mir-676
1300 mir-684 RF00876 Gene; miRNA; 28 1,126 microRNA mir-684
1301 mir-692 RF00875 Gene; miRNA; 11 1,541 microRNA mir-692
1302 mir-7 RF00053 Gene; miRNA; 57 452 mir-7 microRNA precursor
1303 mir-70 RF00833 Gene; miRNA; 4 5 microRNA mir-70
1304 mir-708 RF00917 Gene; miRNA; 21 72 microRNA mir-708
1305 mir-71 RF00832 Gene; miRNA; 12 128 microRNA mir-71
1306 mir-711 RF01923 Gene; miRNA; 5 36 microRNA mir-711
1307 mir-720 RF02002 Gene; miRNA; 35 250 microRNA mir-720
1308 mir-73 RF00831 Gene; miRNA; 7 5 microRNA mir-73
1309 mir-74 RF00830 Gene; miRNA; 4 13 microRNA mir-74
1310 mir-744 RF00936 Gene; miRNA; 5 36 microRNA mir-744
1311 mir-75 RF00828 Gene; miRNA; 4 21 microRNA mir-75
1312 mir-760 RF00915 Gene; miRNA; 7 26 microRNA mir-760
1313 mir-761 RF01939 Gene; miRNA; 4 36 microRNA mir-761
1314 mir-764 RF01920 Gene; miRNA; 6 34 microRNA mir-764
1315 mir-765 RF01027 Gene; miRNA; 2 9 microRNA mir-765
1316 mir-767 RF01033 Gene; miRNA; 14 33 microRNA mir-767
1317 mir-77 RF00827 Gene; miRNA; 5 10 microRNA mir-77
1318 mir-770 RF00888 Gene; miRNA; 4 39 microRNA mir-770
1319 mir-785 RF02244 Gene; miRNA; 4 4 microRNA mir-785
1320 mir-786 RF00895 Gene; miRNA; 2 6 microRNA mir-786
1321 mir-787 RF00896 Gene; miRNA; 2 5 microRNA mir-787
1322 mir-788 RF02245 Gene; miRNA; 4 5 microRNA mir-788
1323 mir-789 RF00905 Gene; miRNA; 2 2 microRNA mir-789
1324 mir-790 RF00894 Gene; miRNA; 2 8 microRNA mir-790
1325 mir-791 RF00902 Gene; miRNA; 3 4 microRNA mir-791
1326 mir-8 RF00241 Gene; miRNA; 13 627 mir-8/mir-141/mir-200 microRNA precursor family
1327 mir-80 RF00817 Gene; miRNA; 4 6 microRNA mir-80
1328 mir-802 RF00887 Gene; miRNA; 13 64 microRNA mir-802
1329 mir-81 RF00728 Gene; miRNA; 9 23 microRNA mir-81
1330 mir-83 RF00812 Gene; miRNA; 4 8 microRNA mir-83
1331 mir-84 RF00811 Gene; miRNA; 4 5 microRNA mir-84
1332 mir-85 RF00810 Gene; miRNA; 5 7 microRNA mir-85
1333 mir-86 RF00808 Gene; miRNA; 5 36 microRNA mir-86
1334 mir-87 RF00726 Gene; miRNA; 8 25 microRNA mir-87
1335 mir-872 RF00918 Gene; miRNA; 6 33 microRNA mir-872
1336 mir-873 RF00910 Gene; miRNA; 3 38 microRNA mir-873
1337 mir-874 RF00919 Gene; miRNA; 4 36 microRNA mir-874
1338 mir-875 RF00933 Gene; miRNA; 9 79 microRNA mir-875
1339 mir-876 RF00935 Gene; miRNA; 3 37 microRNA mir-876
1340 mir-877 RF00912 Gene; miRNA; 13 38 microRNA mir-877
1341 mir-879 RF00931 Gene; miRNA; 2 4 microRNA mir-879
1342 mir-883 RF00909 Gene; miRNA; 3 10 microRNA mir-883
1343 mir-885 RF01015 Gene; miRNA; 3 28 microRNA mir-885
1344 mir-887 RF01035 Gene; miRNA; 3 10 microRNA mir-887
1345 mir-891 RF01042 Gene; miRNA; 7 51 microRNA mir-891
1346 mir-9 RF00237 Gene; miRNA; 43 1,125 mir-9/mir-79 microRNA precursor family
1347 mir-90 RF00785 Gene; miRNA; 5 7 microRNA mir-90
1348 mir-92 RF00464 Gene; miRNA; 23 224 mir-92 microRNA precursor family
1349 mir-920 RF00986 Gene; miRNA; 4 22 microRNA mir-920
1350 mir-922 RF01019 Gene; miRNA; 12 23 microRNA mir-922
1351 mir-924 RF00999 Gene; miRNA; 4 13 microRNA mir-924
1352 mir-927 RF00950 Gene; miRNA; 14 75 microRNA mir-927
1353 mir-929 RF00947 Gene; miRNA; 15 76 microRNA mir-929
1354 mir-932 RF01914 Gene; miRNA; 5 48 microRNA mir-932
1355 mir-934 RF01025 Gene; miRNA; 2 9 microRNA mir-934
1356 mir-936 RF01002 Gene; miRNA; 4 18 microRNA mir-936
1357 mir-937 RF01039 Gene; miRNA; 9 28 microRNA mir-937
1358 mir-938 RF00964 Gene; miRNA; 2 9 microRNA mir-938
1359 mir-939 RF00981 Gene; miRNA; 3 10 microRNA mir-939
1360 mir-940 RF01023 Gene; miRNA; 8 27 microRNA mir-940
1361 mir-941 RF00907 Gene; miRNA; 2 6 microRNA mir-941
1362 mir-942 RF00997 Gene; miRNA; 2 9 microRNA mir-942
1363 mir-944 RF01024 Gene; miRNA; 2 9 microRNA mir-944
1364 mir-96 RF00669 Gene; miRNA; 25 104 microRNA mir-96
1365 mir-965 RF02520 Gene; miRNA; 32 65 mir-965 microRNA precursor family
1366 mir-969 RF01997 Gene; miRNA; 8 9 microRNA mir-969
1367 mir-981 RF01926 Gene; miRNA; 3 49 microRNA mir-981
1368 mir-983 RF00949 Gene; miRNA; 3 4 microRNA mir-983
1369 mir-987 RF02009 Gene; miRNA; 3 12 microRNA mir-987
1370 mir-988 RF01916 Gene; miRNA; 4 31 microRNA mir-988
1371 mir-995 RF01996 Gene; miRNA; 9 11 microRNA mir-995
1372 mir-996 RF00948 Gene; miRNA; 5 39 microRNA mir-996
1373 mir-999 RF01943 Gene; miRNA; 4 46 microRNA mir-999
1374 mir-BART1 RF00363 Gene; miRNA; 5 0 mir-BART1 microRNA precursor family
1375 mir-BART12 RF00874 Gene; miRNA; 2 3 microRNA mir-BART12
1376 mir-BART15 RF00868 Gene; miRNA; 2 4 microRNA mir-BART15
1377 mir-BART17 RF00863 Gene; miRNA; 2 3 microRNA mir-BART17
1378 mir-BART2 RF00364 Gene; miRNA; 8 3 mir-BART2 microRNA precursor family
1379 mir-BART20 RF00864 Gene; miRNA; 2 3 microRNA mir-BART20
1380 mir-BART3 RF00866 Gene; miRNA; 2 6 microRNA mir-BART3
1381 mir-BART5 RF00867 Gene; miRNA; 2 3 microRNA mir-BART5
1382 mir-BART7 RF00869 Gene; miRNA; 2 3 microRNA mir-BART7
1383 mir-BHRF1-1 RF00365 Gene; miRNA; 5 4 mir-BHRF1-1 microRNA precursor family
1384 mir-BHRF1-2 RF00366 Gene; miRNA; 5 4 mir-BHRF1-2 microRNA precursor family
1385 mir-BHRF1-3 RF00367 Gene; miRNA; 4 3 mir-BHRF1-3 microRNA precursor family
1386 mir-iab-4 RF00725 Gene; miRNA; 8 172 microRNA mir-iab-4
1387 mir-M7 RF01009 Gene; miRNA; 2 8 microRNA mir-M7
1388 mir-TAR RF00250 Gene; miRNA; 45 28 Trans-activation response element (TAR)
1389 MIR1023 RF01043 Gene; miRNA; 4 4 microRNA MIR1023
1390 MIR1027 RF00925 Gene; miRNA; 2 3 microRNA MIR1027
1391 MIR1122 RF00906 Gene; miRNA; 12 100,454 microRNA MIR1122
1392 MIR1151 RF00926 Gene; miRNA; 2 2 microRNA MIR1151
1393 MIR1222 RF01927 Gene; miRNA; 5 5 microRNA MIR1222
1394 MIR1223 RF01941 Gene; miRNA; 8 11 microRNA MIR1223
1395 MIR1428 RF01925 Gene; miRNA; 5 105 microRNA MIR1428
1396 MIR1444 RF00956 Gene; miRNA; 3 5 microRNA MIR1444
1397 MIR1446 RF00954 Gene; miRNA; 7 15 microRNA MIR1446
1398 MIR158 RF00845 Gene; miRNA; 2 116 microRNA MIR158
1399 MIR159 RF00638 Gene; miRNA; 66 1,180 microRNA MIR159
1400 MIR162_2 RF00742 Gene; miRNA; 10 218 microRNA MIR162_2
1401 MIR164 RF00647 Gene; miRNA; 39 413 microRNA MIR164
1402 MIR167_1 RF00640 Gene; miRNA; 42 599 microRNA MIR167_1
1403 MIR168 RF00677 Gene; miRNA; 10 172 microRNA MIR168
1404 MIR169_2 RF00645 Gene; miRNA; 100 1,780 microRNA MIR169_2
1405 MIR169_5 RF00865 Gene; miRNA; 6 906 microRNA MIR169_5
1406 MIR171_1 RF00643 Gene; miRNA; 57 1,277 microRNA MIR171_1
1407 MIR171_2 RF00692 Gene; miRNA; 7 108 microRNA MIR171_2
1408 MIR1846 RF02000 Gene; miRNA; 21 1,995 microRNA MIR1846
1409 MIR2118 RF01911 Gene; miRNA; 7 1,241 microRNA MIR2118
1410 MIR2587 RF01917 Gene; miRNA; 4 280 microRNA MIR2587
1411 MIR2907 RF02027 Gene; miRNA; 52 496 microRNA MIR2907
1412 MIR390 RF00689 Gene; miRNA; 16 211 microRNA MIR390
1413 MIR394 RF00688 Gene; miRNA; 19 215 microRNA MIR394
1414 MIR396 RF00648 Gene; miRNA; 26 202 microRNA MIR396
1415 MIR397 RF00704 Gene; miRNA; 7 176 microRNA MIR397
1416 MIR398 RF00695 Gene; miRNA; 14 207 microRNA MIR398
1417 MIR403 RF00842 Gene; miRNA; 13 57 microRNA MIR403
1418 MIR405 RF00768 Gene; miRNA; 13 90 microRNA MIR405
1419 MIR408 RF00690 Gene; miRNA; 8 100 microRNA MIR408
1420 MIR439 RF01902 Gene; miRNA; 5 125 microRNA MIR439
1421 MIR444 RF00920 Gene; miRNA; 4 0 microRNA MIR444
1422 MIR473 RF00778 Gene; miRNA; 6 48 microRNA MIR473
1423 MIR474 RF00779 Gene; miRNA; 11 34 microRNA MIR474
1424 MIR475 RF00721 Gene; miRNA; 4 8 microRNA MIR475
1425 MIR476 RF00739 Gene; miRNA; 2 8 microRNA MIR476
1426 MIR477 RF00780 Gene; miRNA; 3 14 microRNA MIR477
1427 MIR478 RF00652 Gene; miRNA; 17 523 microRNA MIR478
1428 MIR480 RF00782 Gene; miRNA; 69 1,131 microRNA MIR480
1429 MIR529 RF00908 Gene; miRNA; 3 32 microRNA MIR529
1430 MIR530 RF01005 Gene; miRNA; 3 30 microRNA MIR530
1431 MIR535 RF00714 Gene; miRNA; 4 155 microRNA MIR535
1432 MIR807 RF00886 Gene; miRNA; 30 771 microRNA MIR807
1433 MIR811 RF00882 Gene; miRNA; 5 2,442 microRNA MIR811
1434 MIR815 RF00884 Gene; miRNA; 3 11 microRNA MIR815
1435 MIR820 RF00883 Gene; miRNA; 2 47 microRNA MIR820
1436 MIR821 RF00885 Gene; miRNA; 5 4,897 microRNA MIR821
1437 MIR824 RF00943 Gene; miRNA; 12 18 microRNA MIR824
1438 MIR828 RF01026 Gene; miRNA; 4 71 microRNA MIR828
1439 MIR845_1 RF00901 Gene; miRNA; 2 4 microRNA MIR845_1
1440 MIR845_2 RF00975 Gene; miRNA; 2 86 microRNA MIR845_2
1441 MIR854 RF00893 Gene; miRNA; 3 167 microRNA MIR854
1442 MISL RF03079 Gene; sRNA; 44 5 MISL RNA
1443 MNV_3UTR RF02532 Cis-reg; 10 0 Murine norovirus 3'UTR
1444 Moco-II RF01713 Cis-reg; 7 18 Moco-II RNA
1445 MOCO_RNA_motif RF01055 Cis-reg; riboswitch; 160 1,110 Moco (molybdenum cofactor) riboswitch
1446 MOSES4 RF02640 Gene; sRNA; 3 2 S. pyogenes small RNA MOSES4
1447 MPMV_package RF00459 Cis-reg; 9 614 Mason-Pfizer monkey virus packaging signal
1448 mraW RF01746 Cis-reg; 45 457 mraW RNA
1449 Ms1 RF02566 Gene; sRNA; 4 111 Mycobacterium smegmatis small RNA 1
1450 MS2 RF02359 Cis-reg; 5 1 Bacteriophage MS2 operator hairpin
1451 msiK RF01747 Cis-reg; 120 652 msiK RNA
1452 msr RF00170 Gene; 9 21 Retron msr RNA
1453 Ms_AS-1 RF02463 Gene; sRNA; 5 104 Mycobacterium sRNA Ms_AS-1
1454 Ms_AS-4 RF02464 Gene; sRNA; 9 91 Actinobacteria sRNA Ms_AS-4
1455 Ms_AS-5 RF02465 Gene; sRNA; 9 72 Mycobacterium sRNA Ms_AS-5
1456 Ms_AS-8 RF02466 Gene; sRNA; 10 91 Actinobacteria sRNA Ms_AS-8
1457 Ms_IGR-2 RF02467 Gene; sRNA; 3 32 Mycobacterium sRNA Ms_IGR-2
1458 Ms_IGR-4 RF02468 Gene; sRNA; 2 6 Mycobacterium sRNA Ms_IGR-4
1459 Ms_IGR-5 RF02471 Gene; sRNA; 21 543 Actinobacteria sRNA Ms_IGR-5
1460 Ms_IGR-7 RF02469 Gene; sRNA; 14 236 Actinobacteria sRNA Ms_IGR-7
1461 Ms_IGR-8 RF02470 Gene; sRNA; 3 39 Mycobacterium sRNA Ms_IGR-8
1462 mt-tmRNA RF02544 Gene; 11 28 Mitochondrion-encoded tmRNA
1463 mtDNA_ssA RF01853 Gene; antisense; 53 195 Mitochondrial DNA control region secondary structure A
1464 MtlS RF02268 Gene; sRNA; 6 25 MtlS RNA
1465 mtPerm-5S RF02547 Gene; rRNA; 6 1 Permuted mitochondrial genome encoded 5S rRNA
1466 Mu-gpT-DE RF03012 Gene; sRNA; 316 10 Mu-gpT-DE RNA
1467 mycoplasma_FSE RF01842 Cis-reg; frameshift_element; 3 24 mycoplasma ribosomal frameshift element
1468 nadA RF03013 Gene; sRNA; 182 13 nadA RNA
1469 narK RF03032 Cis-reg; 308 89 narK RNA
1470 naRNA4 RF02564 Gene; sRNA; 3 167 Nucleoid-associated noncoding RNA 4 (CssrE)
1471 NBR2 RF02153 Gene; lncRNA; 26 111 Neighbour of BRCA1 gene 2 converved region
1472 ncr1015 RF02449 Gene; sRNA; 16 48 Bacillus sRNA ncr1015
1473 ncr1175 RF02450 Gene; sRNA; 4 4 Bacillus sRNA ncr1175
1474 ncr1241 RF02451 Gene; sRNA; 8 16 Bacillus sRNA ncr1241
1475 ncr1575 RF02452 Gene; sRNA; 29 79 Bacillus sRNA ncr1575
1476 ncr952 RF02453 Gene; sRNA; 6 1 Bacillus sRNA ncr952
1477 ncr982 RF02454 Gene; sRNA; 6 6 Bacillus sRNA ncr982
1478 ncrMT1302 RF02341 Gene; sRNA; 7 57 Mycobacterium sRNA ncrMT1302
1479 NCRUPAR_1 RF02154 Gene; lncRNA; 9 26 Non-protein coding RNA, upstream of F2R/PAR1 conserved region 1
1480 NCRUPAR_2 RF02155 Gene; lncRNA; 3 9 Non-protein coding RNA, upstream of F2R/PAR1 conserved region 2
1481 ncRv12659 RF02659 Gene; sRNA; 2 1 ncRv12659 sRNA
1482 Ncrwmel02 RF02749 Gene; sRNA; 3 5 Wolbachia sRNA mel02
1483 ncS01 RF02865 Gene; sRNA; 4 52 Burkholderia sRNA 1
1484 ncS011 RF02867 Gene; sRNA; 4 51 Burkholderia sRNA 11
1485 ncS025 RF02869 Gene; sRNA; 4 52 Burkholderia sRNA 25
1486 ncS035 RF02870 Gene; sRNA; 3 14 Burkholderia sRNA 35
1487 ncS037 RF02868 Gene; sRNA; 3 4 Burkholderia sRNA 37
1488 ncS16 RF02866 Gene; sRNA; 4 55 Burkholderia sRNA 16 (Bc_KC_sr1)
1489 ncS54 RF02871 Gene; sRNA; 4 91 Burkholderia sRNA 54
1490 NEAT1_1 RF01955 Gene; lncRNA; 17 46 Nuclear enriched abundant transcript 1 conserved region 1
1491 NEAT1_2 RF01956 Gene; lncRNA; 13 44 Nuclear enriched abundant transcript 1 conserved region 2
1492 NEAT1_3 RF01957 Gene; lncRNA; 18 53 Nuclear enriched abundant transcript 1 conserved region 3
1493 neisseria_FSE RF01843 Cis-reg; frameshift_element; 4 2 neiserria ribosomal frameshift element
1494 nhaA-I RF03057 Cis-reg; riboswitch; 281 277 nhaA-I RNA
1495 nhaA-II RF03038 Cis-reg; 16 18 nhaA-II RNA
1496 NiCo RF02683 Cis-reg; riboswitch; 82 170 NiCo riboswitch
1497 NLPC-P60 RF03033 Cis-reg; 17 15 NLPC-P60 RNA
1498 NmsRb RF02877 Gene; sRNA; 6 50 Neisseria metabolic switch regulator b (RcoF1/NgncR163)
1499 NMT1 RF03054 Cis-reg; 382 156 NMT1 RNA
1500 Noro_CRE RF02534 Cis-reg; 21 1 Norovirus cis-acting replication element (CRE)
1501 nos_TCE RF00161 Cis-reg; 9 6 Nanos 3' UTR translation control element
1502 npcTB_6715 RF02886 Gene; sRNA; 3 38 Mycobacterium sRNA 6715
1503 NPPA-AS1_1 RF02156 Gene; lncRNA; 19 26 NPPA antisense RNA 1 conserved region 1
1504 NPPA-AS1_2 RF02157 Gene; lncRNA; 16 19 NPPA antisense RNA 1 conserved region 2
1505 NPPA-AS1_3 RF02158 Gene; lncRNA; 24 32 NPPA antisense RNA 1 conserved region 3
1506 nqrA-Marinomonas RF03035 Gene; sRNA; 5 7 nqrA-Marinomonas RNA
1507 nrdJ RF03034 Gene; sRNA; 73 151 nrdJ RNA
1508 NRF2_IRES RF02531 Cis-reg; IRES; 20 25 Nrf2 internal ribosome entry site (IRES)
1509 NRON RF00636 Gene; 24 93 ncRNA Repressor of NFAT (nuclear factor of activated T cells)
1510 NrrF RF01416 Gene; antisense; 3 6 NrrF RNA
1511 NrsZ RF02695 Gene; sRNA; 4 37 Nitrogen regulated small RNA
1512 nse_sRNA RF02270 Gene; 7 3 Neisseria sigma-E sRNA
1513 NsiR1 RF02399 Gene; sRNA; 17 490 Nitrogen stress-induced RNA 1
1514 NsiR4 RF02677 Gene; sRNA; 4 25 Nitrogen stress-induced RNA 4
1515 NsiR8 RF02593 Gene; sRNA; 2 10 Nitrogen stress-induced RNA 8
1516 NsiR9 RF02594 Gene; sRNA; 3 13 Nitrogen stress-induced RNA 9
1517 nuoG RF01748 Cis-reg; 31 68 nuoG RNA
1518 Ocean-V RF01714 Gene; sRNA; 3 0 Ocean-V RNA
1519 Ocean-VII RF03092 Gene; sRNA; 16 0 Ocean-VII RNA
1520 ODC_IRES RF02535 Cis-reg; IRES; 13 94 ODC internal ribosome entry site (IRES)
1521 ohsC_RNA RF02495 Gene; antitoxin; 34 3 Oppression of Hydrophobic ORF by sRNA
1522 OLE RF01071 Gene; 20 274 Ornate Large Extremophilic RNA
1523 OmrA-B RF00079 Gene; sRNA; 23 146 OmrA-B family
1524 OppA_thermometer RF02777 Cis-reg; thermoregulator; 3 1 OppA 5' UTR thermometer
1525 OrzO-P RF02083 Gene; antitoxin; 7 2 OrzO-P RNA antitoxin family
1526 Oskar_OES RF02548 Cis-reg; 14 10 Oocyte entry signal (OES) from oskar mRNA
1527 osmY RF03036 Gene; sRNA; 38 24 osmY RNA
1528 OTKONC RF03053 Gene; sRNA; 43 0 OTKONC RNA
1529 ovine_lenti_FSE RF01840 Cis-reg; frameshift_element; 14 1 ribosomal frameshift element
1530 OxyS RF00035 Gene; sRNA; 5 12 OxyS RNA
1531 P1 RF00623 Gene; 14 55 Pseudomonas sRNA P1
1532 P10 RF01668 Gene; sRNA; 8 74 Pseudomonas sRNA P10
1533 P11 RF00625 Gene; 15 41 Pseudomonas sRNA P11
1534 P13 RF01665 Gene; sRNA; 2 1 Pseudomonas sRNA P13
1535 P14 RF01669 Gene; sRNA; 4 64 Pseudomonas sRNA P14
1536 P15 RF00627 Gene; 22 66 Pseudomonas sRNA P15
1537 P17 RF01670 Gene; sRNA; 3 17 Pseudomonas sRNA P17
1538 P18 RF01671 Gene; sRNA; 4 28 Pseudomonas sRNA P18
1539 P2 RF01672 Gene; sRNA; 7 1 Psudomonas sRNA P2
1540 P24 RF00629 Gene; 14 60 Pseudomonas sRNA P24
1541 P26 RF00630 Gene; 27 330 Pseudomonas sRNA P26
1542 P27 RF01674 Gene; sRNA; 4 77 Pseudomonas sRNA P27
1543 p27_CRE RF00454 Cis-reg; 12 25 p27 cis-regulatory element
1544 P31 RF01676 Gene; sRNA; 4 74 Pseudomonas sRNA P31
1545 P33 RF02404 Gene; sRNA; 3 2 Pseudomonas sRNA P33
1546 P34 RF02405 Gene; sRNA; 5 58 Pseudomonas sRNA P34
1547 P35 RF01677 Gene; sRNA; 2 1 Pseudomonas sRNA P35
1548 P36 RF01679 Gene; sRNA; 2 37 Pseudomonas sRNA P36
1549 P37 RF01678 Gene; sRNA; 2 1 Pseudomonas sRNA P37
1550 P4 RF01681 Gene; sRNA; 2 6 Pseudomonas sRNA P4
1551 P5 RF01680 Gene; sRNA; 2 1 Pseudomonas sRNA P5
1552 P6 RF01683 Gene; sRNA; 3 4 Pseudomonas sRNA P6
1553 P8 RF01682 Gene; sRNA; 2 1 Pseudomonas sRNA P8
1554 P9 RF00624 Gene; 17 123 Pseudomonas sRNA P9
1555 PA5194_thermometer RF02813 Cis-reg; thermoregulator; 2 3 Pseudomonas PA5194 thermometer
1556 Pab160 RF02796 Gene; snRNA; snoRNA; HACA-box; 4 13 Pab160 RNA
1557 Pab19 RF02794 Gene; snRNA; snoRNA; HACA-box; 3 12 Pab19 RNA
1558 Pab91 RF02795 Gene; snRNA; snoRNA; HACA-box; 3 7 Pab91 RNA
1559 PAGEV RF03037 Gene; sRNA; 86 6 PAGEV RNA
1560 pan RF01749 Cis-reg; 74 480 pan motif
1561 Parabacteroides-1 RF03088 Gene; sRNA; 15 1 Parabacteroides-1 RNA
1562 Parecho_CRE RF00499 Cis-reg; 5 2 Human parechovirus 1 (HPeV1) cis regulatory element (CRE)
1563 PART1_1 RF02159 Gene; lncRNA; 22 38 Prostate androgen-regulated transcript 1 conserved region 1
1564 PART1_2 RF02160 Gene; lncRNA; 29 92 Prostate androgen-regulated transcript 1 conserved region 2
1565 PART1_3 RF02161 Gene; lncRNA; 3 24 Prostate androgen-regulated transcript 1 conserved region 3
1566 patAB RF02907 Cis-reg; leader; 2 2 patAB leader
1567 PCA3_2 RF01894 Gene; lncRNA; 20 92 Prostate cancer antigen RNA 3 conserved region 2
1568 PCGEM1 RF01981 Gene; lncRNA; 26 36 Prostate-specific transcript 1
1569 Pedo-repair RF01715 Cis-reg; 6 6 Pedo-repair RNA
1570 pemK RF02913 Cis-reg; 1,542 762 pemK RNA
1571 PepN_thermometer RF02779 Cis-reg; thermoregulator; 5 3 PepN 5' UTR thermometer
1572 Peptidase-S11 RF03039 Cis-reg; 135 53 Peptidase-S11 RNA
1573 PGK RF03040 Cis-reg; 18 8 PGK RNA
1574 Phage_pRNA RF00044 Gene; 3 2 Bacteriophage pRNA
1575 Phe_leader RF01859 Cis-reg; leader; 71 296 Phenylalanine leader peptide
1576 PhotoRC-I RF01716 Cis-reg; 65 12 PhotoRC-I RNA
1577 PhotoRC-II RF01717 Cis-reg; 445 47 PhotoRC-II RNA
1578 PhrS RF01673 Gene; sRNA; 13 101 PhrS
1579 Pinc RF01983 Gene; lncRNA; 16 34 Pregnancy induced noncoding RNA
1580 PinT RF01404 Gene; sRNA; 4 5 PinT (STnc440) Hfq binding RNA
1581 PISRT1 RF01873 Gene; lncRNA; 18 38 Polled intersex syndrome regulated transcript 1
1582 Pistol RF02679 Gene; ribozyme; 45 30 Pistol ribozyme
1583 PK-BYV RF01100 Cis-reg; 2 1 3'-terminal pseudoknot in BYV
1584 PK-CuYV_BPYV RF01095 Cis-reg; 2 2 3'-terminal pseudoknot of CuYV/BPYV
1585 PK-HAV RF01096 Cis-reg; 2 1 HepA virus 3'-terminal pseudoknot
1586 PK-IAV RF01099 Cis-reg; 32 0 Pseudoknot of influenza A virus gene
1587 PK-PYVV RF01078 Cis-reg; 3 3 3'-terminal pseudoknot in PYVV
1588 PK-repBA RF01089 Cis-reg; 7 39 Pseudoknot of the regulatory region of the repBA gene
1589 PK-repZ RF01087 Cis-reg; 6 0 Pseudoknot of the regulatory region of the repZ gene
1590 PK-SPCSV RF01091 Cis-reg; 2 6 3'-terminal pseudoknot in SPCSV
1591 PK1-TEV_CVMV RF01102 Cis-reg; leader; 2 1 5'-leader pseudoknot of TEV/CVMV
1592 Plant_SRP RF01855 Gene; 63 1,335 Plant signal recognition particle RNA
1593 Plant_U3 RF01847 Gene; snRNA; snoRNA; CD-box; 24 1,185 Plant small nucleolar RNA U3
1594 Plasmid_R1162 RF00043 Gene; antisense; 8 3 R1162-like plasmid antisense RNA
1595 Plasmid_RNAIII RF00235 Gene; 7 2 Plasmid RNAIII
1596 plasmodium_snoR11 RF01589 Gene; snRNA; snoRNA; HACA-box; 2 9 small nucleolar RNA snoR11
1597 plasmodium_snoR14 RF01590 Gene; snRNA; snoRNA; CD-box; 4 12 small nucleolar RNA snoR14
1598 plasmodium_snoR16 RF01593 Gene; snRNA; snoRNA; CD-box; 3 26 small nucleolar RNA snoR16
1599 plasmodium_snoR17 RF01592 Gene; snRNA; snoRNA; CD-box; 5 17 small nucleolar RNA snoR17
1600 plasmodium_snoR20 RF01596 Gene; snRNA; snoRNA; CD-box; 2 30 small nucleolar RNA snoR20
1601 plasmodium_snoR21 RF01864 Gene; snRNA; snoRNA; CD-box; 4 25 small nucleolar RNA snoR21
1602 plasmodium_snoR24 RF01599 Gene; snRNA; snoRNA; CD-box; 4 17 small nucleolar RNA snoR24
1603 plasmodium_snoR26 RF01601 Gene; snRNA; snoRNA; CD-box; 3 27 small nucleolar RNA snoR26
1604 plasmodium_snoR27 RF01602 Gene; snRNA; snoRNA; HACA-box; 4 24 small nucleolar RNA snoR27
1605 plasmodium_snoR28 RF01604 Gene; snRNA; snoRNA; CD-box; 3 23 small nucleolar RNA snoR28
1606 plasmodium_snoR30 RF01605 Gene; snRNA; snoRNA; CD-box; 3 26 small nucleolar RNA snoR30
1607 plasmodium_snoR31 RF01606 Gene; snRNA; snoRNA; HACA-box; 3 23 small nucleolar RNA snoR31
1608 pntA RF01810 Gene; sRNA; 10 6 pntA sRNA
1609 Polynucleobacter-1 RF01718 Gene; sRNA; 16 2 Polynucleobacter-1 RNA
1610 poplar-1 RF03041 Gene; sRNA; 22 0 poplar-1 RNA
1611 porB RF03042 Gene; sRNA; 85 18 porB RNA
1612 Poribacteria-1 RF03113 Gene; sRNA; 6 0 Poribacteria-1 RNA
1613 Pospi_RY RF00362 Cis-reg; 16 0 Pospiviroid RY motif stem loop
1614 potC RF01751 Cis-reg; 136 1 potC RNA
1615 Pox_AX_element RF00384 Cis-reg; 10 7 Poxvirus AX element late mRNA cis-regulatory element
1616 ppoRNA RF02554 Gene; rRNA; 2 0 mt-5S-like P. polycephalum
1617 PreQ1 RF00522 Cis-reg; riboswitch; 35 497 PreQ1 riboswitch
1618 preQ1-II RF01054 Cis-reg; riboswitch; 14 55 preQ1-II (pre queuosine) riboswitch
1619 PreQ1-III RF02680 Cis-reg; riboswitch; 28 9 PreQ1-III riboswitch
1620 Prevotella-2 RF03043 Gene; sRNA; 20 4 Prevotella-2 RNA
1621 PrfA RF00038 Cis-reg; thermoregulator; 11 1 PrfA thermoregulator UTR
1622 Prion_pknot RF00523 Cis-reg; 148 93 Prion pseudoknot
1623 pRNA RF01518 Gene; 23 92 NoRC associated RNA, pRNA
1624 Proteo-phage-1 RF03044 Gene; sRNA; 67 40 Proteo-phage-1 RNA
1625 Protozoa_SRP RF01856 Gene; 18 68 Protozoan signal recognition particle RNA
1626 proV RF03045 Gene; sRNA; 16 12 proV RNA
1627 PrrB_RsmZ RF00166 Gene; sRNA; 37 102 PrrB/RsmZ RNA family
1628 PrrF RF00444 Gene; sRNA; 18 124 PrrF RNA
1629 psaA RF01752 Cis-reg; 31 14 psaA RNA
1630 psbNH RF01753 Cis-reg; 39 8 psbNH RNA
1631 Pseudomon-1 RF01719 Gene; sRNA; 19 76 Pseudomon-1/ErsA RNA
1632 Pseudomon-groES RF01721 Cis-reg; 18 70 Pseudomon-groES RNA
1633 Pseudomon-Rho RF01720 Cis-reg; 16 74 Pseudomon-Rho RNA
1634 Pseudomonadales-1 RF03046 Gene; sRNA; 54 18 Pseudomonadales-1 RNA
1635 PsiU1-6 RF02665 Gene; snRNA; snoRNA; scaRNA; 3 11 Drosophila small cajal body-specific RNA PsiU1-6
1636 PsiU2-35.45 RF02666 Gene; snRNA; snoRNA; scaRNA; 3 5 Drosophila small cajal body-specific RNA PsiU2-35.45
1637 PsiU2-38.40.42 RF02667 Gene; snRNA; snoRNA; scaRNA; 3 11 Drosophila small cajal body-specific RNA PsiU2-38.40.4
1638 PsiU2-55 RF02668 Gene; snRNA; snoRNA; scaRNA; 3 10 Drosophila small cajal body-specific RNA PsiU2-55
1639 PsiU6-40 RF02669 Gene; snRNA; snoRNA; scaRNA; 3 9 Drosophila small cajal body-specific RNA PsiU6-40
1640 psm_mec_RNA RF02693 Gene; sRNA; 4 2 psm_mec locus RNA
1641 psRNA14 RF02351 Gene; sRNA; 3 3 Proteobacteria sRNA psRNA14
1642 psRNA2 RF02349 Gene; sRNA; 7 77 Proteobacterial sRNA psRNA2
1643 psRNA6 RF02350 Gene; sRNA; 2 5 Nitrosomonas sRNA psRNA6
1644 PsrR1 RF02701 Gene; sRNA 13 55 Photosynthesis regulatory RNA1
1645 PssrA RF02797 Gene; sRNA; 6 38 Plasmid-encoded Shigella sRNA A
1646 PtaRNA1 RF01811 Gene; antitoxin; 16 30 Plasmid transferred anti-sense RNA
1647 purD RF01069 Cis-reg; 21 80 purD RNA motif
1648 Purine RF00167 Cis-reg; riboswitch; 133 2,570 Purine riboswitch
1649 PutA_thermometer RF02780 Cis-reg; thermoregulator; 4 2 PutA 5' UTR thermometer
1650 PVT1_1 RF02164 Gene; lncRNA; 17 29 Pvt1 oncogene conserved region 1
1651 PVT1_2 RF02165 Gene; lncRNA; 17 36 Pvt1 oncogene conserved region 2
1652 PVT1_3 RF02166 Gene; lncRNA; 25 53 Pvt1 oncogene conserved region 3
1653 PVT1_4 RF02167 Gene; lncRNA; 10 21 Pvt1 oncogene conserved region 4
1654 PVT1_5 RF02168 Gene; lncRNA; 23 33 Pvt1 oncogene conserved region 5
1655 PVT1_6 RF02169 Gene; lncRNA; 7 27 Pvt1 oncogene conserved region 6
1656 PVT1_7 RF02170 Gene; lncRNA; 8 16 Pvt1 oncogene conserved region 7
1657 PVX_3 RF00184 Cis-reg; 4 1 Potato virus X cis-acting regulatory element
1658 Pxr RF01812 Gene; sRNA; 2 5 Pxr regulatory sRNA
1659 PYLIS_1 RF01982 Cis-reg; 20 39 Pyrrolysine insertion sequence 1
1660 PYLIS_2 RF02509 Cis-reg; 23 70 Pyrrolysine insertion sequence mtbB
1661 PYLIS_3 RF02510 Cis-reg; 23 367 Pyrrolysine insertion sequence mttB
1662 PYLIS_4 RF02511 Cis-reg; 2 3 Pyrrolysine insertion sequence TetR
1663 PYLIS_5 RF02512 Cis-reg; 17 17 Pyrrolysine insertion sequence transposase 1
1664 PYLIS_6 RF02513 Cis-reg; 3 4 Pyrrolysine insertion sequence transposase 2
1665 PyrC_leader RF02372 Cis-reg; leader; 9 12 PyrC leader
1666 PyrD_leader RF02373 Cis-reg; leader; 27 59 PyrD leader
1667 PyrG_leader RF02371 Cis-reg; leader; 10 14 PyrG leader
1668 Pyrobac-1 RF01722 Gene; sRNA; 8 5 Pyrobac-1 RNA
1669 PyrR RF00515 Cis-reg; 41 1,160 PyrR binding site
1670 PyrR201 RF02801 Gene; snRNA; snoRNA; HACA-box; 5 8 Pyrobaculum sRNA 201
1671 PyrR204 RF02802 Gene; snRNA; snoRNA; HACA-box; 5 2 Pyrobaculum sRNA 204
1672 PyrR205 RF02803 Gene; snRNA; snoRNA; HACA-box; 5 35 Pyrobaculum sRNA 205
1673 PyrR206 RF02804 Gene; snRNA; snoRNA; HACA-box; 4 3 Pyrobaculum sRNA 206
1674 PyrR207 RF02805 Gene; snRNA; snoRNA; HACA-box; 4 3 Pyrobaculum sRNA 207
1675 PyrR208 RF02806 Gene; snRNA; snoRNA; HACA-box; 4 2 Pyrobaculum sRNA 208
1676 PyrR209 RF02807 Gene; snRNA; snoRNA; HACA-box; 4 5 Pyrobaculum sRNA 209
1677 PyrR210 RF02808 Gene; snRNA; snoRNA; HACA-box; 6 4 Pyrobaculum sRNA 210
1678 Qrr RF00378 Gene; sRNA; 30 170 Qrr RNA
1679 queA RF03093 Gene; sRNA; 8 1 queA RNA
1680 R2_retro_el RF00524 Cis-reg; 15 1,564 R2 RNA element
1681 radC RF01754 Cis-reg; 130 424 radC RNA
1682 RAGATH-13 RF02688 Gene; ribozyme; 20 51 RAGATH-13 RNA
1683 RAGATH-16 RF03047 Gene; sRNA; 18 0 RAGATH-16 RNA
1684 RAGATH-17 RF03095 Gene; sRNA; 7 0 RAGATH-17 RNA
1685 RAGATH-18 RF03064 Gene; sRNA; 1,420 348 RAGATH-18 RNA
1686 RAGATH-19 RF03096 Gene; sRNA; 11 0 RAGATH-19 RNA
1687 RAGATH-20 RF03048 Gene; sRNA; 9 0 RAGATH-20 RNA
1688 RAGATH-21 RF03097 Gene; sRNA; 38 0 RAGATH-21 RNA
1689 RAGATH-22 RF03098 Gene; sRNA; 18 1 RAGATH-22 RNA
1690 RAGATH-23 RF03099 Gene; sRNA; 11 0 RAGATH-23 RNA
1691 RAGATH-24 RF03049 Gene; sRNA; 22 0 RAGATH-24 RNA
1692 RAGATH-25 RF03050 Gene; sRNA; 21 2 RAGATH-25 RNA
1693 RAGATH-26 RF03051 Gene; sRNA; 8 0 RAGATH-26 RNA
1694 RAGATH-27 RF03100 Gene; sRNA; 15 1 RAGATH-27 RNA
1695 RAGATH-28 RF03052 Gene; sRNA; 85 10 RAGATH-28 RNA
1696 RAGATH-30 RF03055 Gene; sRNA; 33 0 RAGATH-30 RNA
1697 RAGATH-31 RF03101 Gene; sRNA; 26 1 RAGATH-31 RNA
1698 RAGATH-32 RF02922 Cis-reg; 19 37 RAGATH-32 RNA
1699 RAGATH-33 RF03102 Gene; sRNA; 7 0 RAGATH-33 RNA
1700 RAGATH-34 RF03103 Gene; sRNA; 24 0 RAGATH-34 RNA
1701 RAGATH-35 RF03056 Gene; sRNA; 16 7 RAGATH-35 RNA
1702 RAGATH-36 RF03104 Gene; sRNA; 14 0 RAGATH-36 RNA
1703 RAGATH-5 RF02685 Gene; ribozyme; 39 19 RAGATH-5 RNA
1704 RAGATH-6 RF02686 Gene; ribozyme; 2 0 RAGATH-6 RNA
1705 RAGATH-7-assoc RF03105 Gene; sRNA; 26 0 RAGATH-7-assoc RNA
1706 RAGATH-8 RF02687 Gene; ribozyme; 3 3 RAGATH-8 RNA
1707 raiA RF03072 Cis-reg; riboswitch; 488 247 raiA RNA
1708 raiA-hairpin RF03059 Gene; sRNA; 80 163 raiA-hairpin RNA
1709 RalA RF02694 Gene; sRNA; 10 1 RalR antitoxin
1710 RatA RF01776 Gene; antitoxin; 16 216 RNA anti-toxin A
1711 RCNMV_5UTR RF01454 Cis-reg; 3 1 5'UTR enhancer element
1712 RCNMV_TE_DR1 RF01453 Cis-reg; 3 1 3'TE-DR1 translation enhancer element
1713 RcsR1 RF02552 Gene; sRNA; 10 41 RcsR1 sRNA
1714 rdlD RF01813 Gene; antitoxin; 52 25 rdlD antitoxin
1715 Ref1C RF02845 Gene; sRNA; 2 6 Enterococcus sRNA 1C
1716 Ref55 RF02838 Gene; sRNA; 4 9 Enterococcus sRNA 55
1717 Ref64 RF02847 Gene; sRNA; 3 20 Enterococcus sRNA 64
1718 Ref66 RF02839 Gene; antisense; 2 8 Enterococcus sRNA 66
1719 Ref68 RF02840 Gene; sRNA; 78 125 Enterococcus sRNA 68 (Lacto-3 RNA)
1720 Ref70 RF02841 Gene; sRNA; 3 10 Enterococcus sRNA 70
1721 Ref84 RF02846 Gene; antisense; 5 45 Enterococcus sRNA 84
1722 RefA1 RF02842 Gene; sRNA; 4 8 Enterococcus sRNA A1
1723 RefA5 RF02843 Gene; antisense; 3 6 Enterococcus sRNA A5
1724 RefA9 RF02844 Gene; antisense; 4 13 Enterococcus sRNA A9
1725 RefB11 RF02848 Gene; sRNA; 4 39 Enterococcus sRNA B11
1726 REN-SRE RF00180 Cis-reg; 13 36 Renin stability regulatory element (REN-SRE)
1727 Retro_dr1 RF00214 Cis-reg; 26 94 Retrovirus direct repeat 1 (dr1)
1728 Rev11 RF02736 Gene; antisense; 3 46 Soft rot Enterobacteriaceae Rev 11 asRNA
1729 Rev13 RF02737 Gene; antisense; 3 1 Soft rot Enterobacteriaceae Rev 13 asRNA
1730 Rev24 RF02738 Gene; antisense; 4 7 Soft rot Enterobacteriaceae Rev 24 asRNA
1731 Rev39_5p_UTR RF02744 Cis-reg; 4 113 Soft rot Enterobacteriaceae Rev 39 5'UTR
1732 Rev41 RF02739 Gene; sRNA; 3 1 Soft rot Enterobacteriaceae Rev 41 sRNA
1733 Rev42_5p_UTR RF02745 Cis-reg; 3 3 Soft rot Enterobacteriaceae Rev 42 5'UTR
1734 Rev44 RF02741 Gene; antisense; 3 2 Soft rot Enterobacteriaceae Rev 44 asRNA
1735 Rev72 RF02742 Gene; antisense; 3 1 Soft rot Enterobacteriaceae Rev 72 asRNA
1736 RFPL3-AS1_1 RF02171 Gene; lncRNA; 4 14 RFPL3 antisense RNA 1 conserved region 1
1737 RFPL3-AS1_2 RF02172 Gene; lncRNA; 3 14 RFPL3 antisense RNA 1 conserved region 2
1738 RF_site1 RF01074 Cis-reg; frameshift_element; 4 11 Putative RNA-dependent RNA polymerase ribosomal frameshift site
1739 RF_site2 RF01076 Cis-reg; frameshift_element; 2 2 Polymerase ribosomal frameshift site
1740 RF_site3 RF01079 Cis-reg; frameshift_element; 2 1 Putative RNA-dependent RNA polymerase ribosomal frameshift site
1741 RF_site4 RF01090 Cis-reg; frameshift_element; 7 37 Edr gene ribosomal frameshift signal
1742 RF_site5 RF01093 Cis-reg; frameshift_element; 12 103 Ma3 gene ribosomal frameshift signal
1743 RF_site6 RF01094 Cis-reg; frameshift_element; 2 1 Polymerase ribosomal frameshift site
1744 RF_site8 RF01097 Cis-reg; frameshift_element; 4 883 Gag/pro ribosomal frameshift site
1745 RF_site9 RF01098 Cis-reg; frameshift_element; 2 4 Gag/pro ribosomal frameshift site
1746 RgsA RF00628 Gene; sRNA 27 80 RgsA sRNA
1747 Rhino_CRE RF00220 Cis-reg; 12 0 Human rhinovirus internal cis-acting regulatory element (CRE)
1748 Rhizobiales-2 RF01723 Gene; sRNA; 15 48 Rhizobiales-2 RNA
1749 RhlA_thermometer RF02758 Cis-reg; thermoregulator; 4 1 RhlA 5' UTR ROSE like thermometer
1750 Rhodo-rpoB RF03074 Cis-reg; 261 204 Rhodo-rpoB RNA
1751 rhtB RF01814 Gene; sRNA; 14 9 rhtB sRNA
1752 Ricks_sRNA10 RF02574 Gene; sRNA; 3 2 Rickettsia sRNA 10
1753 rimP RF01770 Cis-reg; leader; 46 240 Gammaprotebacteria rimP leader
1754 rivX RF02099 Gene; sRNA; 2 1 rivX sRNA
1755 rli117 RF02909 Gene; sRNA; 3 12 Listeria sRNA rli117
1756 rli22 RF01457 Gene; sRNA; 6 1 Listeria sRNA rli22
1757 rli23 RF01458 Gene; antisense; 7 45 Listeria snRNA rli23
1758 rli24 RF01461 Gene; sRNA; 6 1 Listeria sRNA rli22
1759 rli26 RF01462 Gene; sRNA; 5 1 Listeria sRNA rli26
1760 rli27 RF01463 Gene; sRNA; 3 1 Listeria sRNA rli27
1761 rli28 RF01492 Gene; sRNA; 21 397 Listeria sRNA rli28
1762 rli30 RF02908 Gene; antisense; 3 17 Listeria sRNA rli30
1763 rli31 RF01465 Gene; sRNA; 3 1 Listeria sRNA rli31
1764 rli32 RF01468 Gene; sRNA; 5 1 Listeria sRNA rli32
1765 rli33 RF01469 Gene; sRNA; 3 3 Listeria sRNA rli33
1766 rli34 RF01466 Gene; sRNA; 5 3 Listeria sRNA rli34
1767 rli36 RF01467 Gene; sRNA; 6 1 Listeria sRNA rli36
1768 rli37 RF01493 Gene; sRNA; 4 1 Listeria sRNA rli37
1769 rli38 RF01470 Gene; sRNA; 20 80 Listeria sRNA rli38
1770 rli40 RF01472 Gene; sRNA; 4 1 Listeria sRNA rli40
1771 rli41 RF01473 Gene; sRNA; 6 5 Listeria sRNA rli41
1772 rli42 RF01474 Gene; sRNA; 4 1 Listeia sRNA rli42
1773 rli43 RF01477 Gene; sRNA; 4 1 Listeria sRNA rli43
1774 rli45 RF01475 Gene; antisense; 6 1 Listeria snRNA rli45
1775 rli47 RF01478 Gene; sRNA; 9 1 Listeria sRNA rli47
1776 rli48 RF01479 Gene; sRNA; 3 4 Listeria sRNA rli48
1777 rli49 RF01488 Gene; sRNA; 5 1 Listeria sRNA rli49
1778 rli51 RF01490 Cis-reg; 9 3 Listeria snRNA rli51
1779 rli52 RF01480 Cis-reg; 6 1 Listeria sRNA rli52
1780 rli53 RF01481 Cis-reg; 5 1 Listeria sRNA rli53
1781 rli54 RF01491 Cis-reg; 5 4 Listeria sRNA rli54
1782 rli56 RF01483 Cis-reg; 6 1 Listeria sRNA rli56
1783 rli59 RF01484 Cis-reg; 5 1 Listeria sRNA rli59
1784 rli60 RF02414 Gene; sRNA; 11 23 Listeria sRNA rli60
1785 rli61 RF01485 Cis-reg; 4 9 Listeria sRNA rli61
1786 rli62 RF01486 Cis-reg; 2 5 Listeria sRNA rli62
1787 rliA RF01464 Gene; sRNA; 4 3 Listeria sRNA rliA
1788 rliB RF01471 Gene; sRNA; 4 5 Listeria sRNA rliB
1789 rliD RF01494 Gene; antisense; 9 88 Listeria sRNA rliD
1790 rliE RF01459 Gene; sRNA; 4 1 Listeria sRNA rliE
1791 rliF RF01476 Gene; sRNA; 5 4 Listeria sRNA rliF
1792 rliG RF02415 Gene; sRNA; 5 8 Listeria sRNA rliG
1793 rliH RF01460 Gene; sRNA; 3 1 Listeria sRNA rliH
1794 rliI RF01487 Gene; sRNA; 5 7 Listeria sRNA rliI
1795 RmaA RF02629 Gene; sRNA; 2 0 Regulator of motility and amylovoran A
1796 rmf RF01755 Cis-reg; 16 72 rmf RNA
1797 RMST_1 RF01962 Gene; lncRNA; 14 37 Rhabdomyosarcoma 2 associated transcript conserved region 1
1798 RMST_10 RF01971 Gene; lncRNA; 21 39 Rhabdomyosarcoma 2 associated transcript conserved region 10
1799 RMST_2 RF01963 Gene; lncRNA; 16 42 Rhabdomyosarcoma 2 associated transcript conserved region 2
1800 RMST_3 RF01964 Gene; lncRNA; 16 38 Rhabdomyosarcoma 2 associated transcript conserved region 3
1801 RMST_4 RF01965 Gene; lncRNA; 17 39 Rhabdomyosarcoma 2 associated transcript conserved region 4
1802 RMST_5 RF01966 Gene; lncRNA; 21 39 Rhabdomyosarcoma 2 associated transcript conserved region 5
1803 RMST_6 RF01967 Gene; lncRNA; 18 94 Rhabdomyosarcoma 2 associated transcript conserved region 6
1804 RMST_7 RF01968 Gene; lncRNA; 22 91 Rhabdomyosarcoma 2 associated transcript conserved region 7
1805 RMST_8 RF01969 Gene; lncRNA; 22 94 Rhabdomyosarcoma 2 associated transcript conserved region 8
1806 RMST_9 RF01970 Gene; lncRNA; 28 102 Rhabdomyosarcoma 2 associated transcript conserved region 9
1807 RNA-OUT RF00240 Gene; antisense; 16 76 RNA-OUT
1808 RnaG RF02550 Gene; sRNA; 4 1 RnaG sRNA
1809 RNAI RF00106 Gene; antisense; 10 141 RNAI
1810 RNAIII RF00503 Gene; 10 20 RNAIII
1811 RNaseP-T RF02357 Gene; ribozyme; 9 13 RNaseP truncated form
1812 RNaseP_arch RF00373 Gene; ribozyme; 70 303 Archaeal RNase P
1813 RNaseP_bact_a RF00010 Gene; ribozyme; 458 6,023 Bacterial RNase P class A
1814 RNaseP_bact_b RF00011 Gene; ribozyme; 114 676 Bacterial RNase P class B
1815 RNaseP_nuc RF00009 Gene; ribozyme; 116 1,237 Nuclear RNase P
1816 RNase_MRP RF00030 Gene; ribozyme; 66 1,062 RNase MRP
1817 RNase_P RF01577 Gene; ribozyme; 2 22 Plasmodium RNase_P
1818 rncO RF00552 Cis-reg; 18 119 rncO
1819 rne-II RF01756 Cis-reg; 16 74 rne-II RNA
1820 rne5 RF00040 Cis-reg; 6 105 RNase E 5' UTR element
1821 rnk_leader RF01771 Cis-reg; leader; 13 36 Enterobacteria rnk leader
1822 rnk_pseudo RF01772 Cis-reg; leader; 15 38 Pseudomonas rnk leader
1823 ROOL RF03087 Gene; sRNA; 290 26 ROOL RNA
1824 ROSE RF00435 Cis-reg; thermoregulator; 13 240 Repression of heat shock gene expression (ROSE) element
1825 ROSE_2 RF01832 Cis-reg; thermoregulator; 14 31 Repression of heat shock gene expression (ROSE) element
1826 ROSE_3 RF02523 Cis-reg; thermoregulator; 16 73 Repression of heat shock gene expression (ROSE) element
1827 Rota_CRE RF00501 Cis-reg; 14 1 Rotavirus cis-acting replication element (CRE)
1828 Rothia-sucC RF03024 Cis-reg; 28 2 Rothia-sucC RNA
1829 rox1 RF01667 Cis-reg; 3 3 Drosophila rox1 ncRNA
1830 rox2 RF01666 Cis-reg; 4 8 Drosophila rox2 ncRNA
1831 rpfG RF03023 Gene; sRNA; 28 3 rpfG RNA
1832 RprA RF00034 Gene; sRNA; 13 85 RprA RNA
1833 rpsB RF01815 Gene; sRNA; 4 150 rpsB sRNA
1834 RpsF_leader RF02893 Cis-reg; leader; 10 214 RpsF leader
1835 rpsL_pseudo RF01773 Cis-reg; leader; 9 72 Pseudomonas rpsL leader
1836 rpsL_ricks RF01774 Cis-reg; leader; 7 4 Rickettsia rpsL leader
1837 Rp_sR47 RF02800 Gene; sRNA; 2 27 Rickettsia sRNA47
1838 RRE RF00036 Cis-reg; 65 20 HIV Rev response element
1839 RsaA RF01816 Gene; sRNA; 7 13 RNA Staph. aureus A
1840 RsaB RF01817 Gene; sRNA; 2 1 RNA Staph. aureus A
1841 RsaC RF01818 Gene; sRNA; 3 1 RNA Staph. aureus C
1842 RsaD RF01819 Gene; sRNA; 8 17 RNA Staph. aureus D
1843 RsaE RF01820 Gene; sRNA; 15 143 RNA Staph. aureus E (RoxS)
1844 RsaF RF01858 Gene; sRNA; 4 1 RNA Staph. aureus F
1845 RsaH RF01821 Gene; sRNA; 5 14 RNA Staph. aureus H
1846 RsaJ RF01822 Gene; sRNA; 3 1 RNA Staph. aureus A
1847 RsaOG RF01775 Gene; sRNA; 7 21 RNA S.aureus Orsay G
1848 rseX RF01401 Gene; sRNA; 12 7 rseX Hfq binding RNA
1849 RsmW RF02809 Gene; sRNA; 3 4 RsmW RNA family
1850 rsmX RF02144 Gene; 16 96 rsmX
1851 RsmY RF00195 Gene; sRNA; 11 71 RsmY RNA family
1852 rspL RF01823 Gene; sRNA; 6 14 rpsL sRNA
1853 RSV_PBS RF00467 Cis-reg; 22 31 Rous sarcoma virus (RSV) primer binding site (PBS)
1854 RSV_RNA RF01417 Cis-reg; 8 71 Retroviral 3'UTR stability element
1855 RT-1 RF03114 Gene; sRNA; 5 1 RT-1 RNA
1856 RT-10 RF03022 Gene; sRNA; 113 6 RT-10 RNA
1857 RT-11 RF03106 Gene; sRNA; 3 0 RT-11 RNA
1858 RT-12 RF03016 Gene; sRNA; 42 6 RT-12 RNA
1859 RT-13 RF03017 Gene; sRNA; 13 11 RT-13 RNA
1860 RT-14 RF02921 Gene; sRNA; 143 52 RT-14 RNA
1861 RT-15 RF03018 Gene; sRNA; 64 30 RT-15 RNA
1862 RT-16 RF03019 Gene; sRNA; 104 14 RT-16 RNA
1863 RT-17 RF03020 Gene; sRNA; 63 15 RT-17 RNA
1864 RT-18 RF03021 Gene; sRNA; 141 21 RT-18 RNA
1865 RT-19 RF03073 Gene; sRNA; 23 0 RT-19 RNA
1866 RT-2 RF03077 Gene; sRNA; 195 14 RT-2 RNA
1867 RT-3 RF03068 Gene; sRNA; 231 13 RT-3 RNA
1868 RT-4 RF03025 Gene; sRNA; 47 3 RT-4 RNA
1869 RT-5 RF03026 Gene; sRNA; 71 11 RT-5 RNA
1870 RT-6 RF03027 Gene; sRNA; 59 7 RT-6 RNA
1871 RT-7 RF03028 Gene; sRNA; 54 4 RT-7 RNA
1872 RT-8 RF03029 Gene; sRNA; 9 2 RT-8 RNA
1873 RT-9 RF03080 Gene; sRNA; 48 17 RT-9 RNA
1874 RtT RF00391 Cis-reg; 57 507 RtT RNA
1875 Rubella_3 RF00194 Cis-reg; 25 3 Rubella virus 3' cis-acting element
1876 RUF1 RF01578 Gene; sRNA; 3 20 Plasmodium RNA of unkown function RUF1
1877 RUF2 RF01579 Gene; sRNA; 3 22 Plasmodium RNA of unknown function RUF2
1878 RUF20 RF01824 Gene; 6 9 RNA of unknown function 20
1879 RUF21 RF01825 Gene; 5 9 RNA of unknown function 21
1880 RUF3 RF01580 Gene; sRNA; 3 10 Plasmodium RNA of unkown function RU6-F3
1881 RUF4 RF01582 Gene; sRNA; 2 15 RNA of unknown function RUF4
1882 RUF6-5 RF01581 Gene; sRNA; 20 125 Plasmodium RNA of unknown function RUF6-5
1883 RybB RF00110 Gene; sRNA; 8 115 RybB RNA
1884 rydB RF00118 Gene; sRNA; 7 49 rydB RNA
1885 RydC RF00505 Gene; sRNA; 5 16 RydC RNA
1886 ryfA RF00126 Gene; sRNA; 9 23 ryfA RNA
1887 RyhB RF00057 Gene; sRNA; 26 261 RyhB RNA
1888 S-element RF00490 Cis-reg; 29 205 S-element
1889 S15 RF00114 Cis-reg; leader; 78 676 Ribosomal S15 leader
1890 s2m RF00164 Cis-reg; 38 26 Coronavirus 3' stem-loop II-like motif (s2m)
1891 S35 RF02894 Gene; sRNA; 3 64 Staphylococcus sRNA 35 (srn_0335)
1892 S414 RF02895 Gene; sRNA; 5 38 Staphylococcus sRNA 414
1893 S774 RF02896 Gene; sRNA; 4 24 Staphylococcus sRNA 774
1894 S808 RF02897 Gene; sRNA; 4 22 Staphylococcus sRNA 808
1895 Sacc_telomerase RF01050 Gene; 13 9 Saccharomyces telomerase
1896 sagA RF02524 Gene; sRNA; 6 6 Streptococcus sRNA sagA
1897 SAH_riboswitch RF01057 Cis-reg; riboswitch; 52 809 S-adenosyl-L-homocysteine riboswitch
1898 saliva-tongue-1 RF03107 Gene; sRNA; 10 0 saliva-tongue-1 RNA
1899 salivarius-1 RF03030 Gene; sRNA; 19 5 salivarius-1 RNA
1900 SAM RF00162 Cis-reg; riboswitch; 433 5,593 SAM riboswitch (S box leader)
1901 SAM-Chlorobi RF01724 Cis-reg; 9 17 SAM-Chlorobi RNA
1902 SAM-I-IV-variant RF01725 Cis-reg; riboswitch; 437 355 SAM-I/IV variant riboswitch
1903 SAM-II_long_loops RF01726 Cis-reg; 126 457 SAM-II long loop
1904 SAM-IV RF00634 Cis-reg; riboswitch; 40 1,204 S-adenosyl methionine (SAM) riboswitch,
1905 SAM-SAH RF01727 Cis-reg; riboswitch; 53 198 SAM/SAH riboswitch
1906 SAM_alpha RF00521 Cis-reg; riboswitch; 40 800 SAM riboswitch (alpha-proteobacteria)
1907 SAM_V RF01826 Cis-reg; riboswitch; 6 14 SAM-V riboswitch
1908 SAM_VI RF02885 Cis-reg; riboswitch; 7 8 SAM-VI riboswitch
1909 sar RF00262 Gene; antisense; 4 9 sar RNA
1910 SAR11_0636 RF01827 Gene; sRNA; 13 8 SAR11_0636 sRNA
1911 satBaMV_CRE RF00389 Cis-reg; 42 1 Bamboo mosaic virus satellite RNA cis-regulatory element
1912 sau-13 RF02385 Gene; sRNA; 6 15 Staphylococcus sRNA sau-13
1913 sau-19 RF02386 Gene; sRNA; 4 1 Staphylococcus sRNA sau-19
1914 sau-27 RF02387 Gene; sRNA; 3 1 Staphylococcus sRNA sau-27
1915 sau-30 RF02388 Gene; sRNA; 2 2 Staphylococcus sRNA sau-30
1916 sau-31 RF02389 Gene; sRNA; 3 1 Staphylococcus sRNA sau-31
1917 sau-41 RF02390 Gene; sRNA; 2 1 Staphylococcus sRNA sau-41
1918 sau-53 RF02392 Gene; sRNA; 4 1 Staphylococcus sRNA sau-53
1919 sau-59 RF02393 Gene; sRNA; 3 8 Staphylococcus sRNA sau-59
1920 sau-5949 RF02396 Gene; sRNA; 7 59 Staphylococcus sRNA sau-5949
1921 sau-5971 RF02397 Gene; sRNA; 3 1 Staphylococcus sRNA sau-5971
1922 sau-6072 RF02398 Gene; sRNA; 2 1 Staphylococcus sRNA sau-6072
1923 sau-63 RF02394 Gene; sRNA; 3 1 Staphylococcus sRNA sau-63
1924 sau-66 RF02395 Gene; sRNA; 3 2 Staphylococcus sRNA sau-66
1925 sbcD RF01757 Gene; sRNA; 6 18 sbcD RNA
1926 sbrA RF01489 Gene; sRNA; 6 30 Listeria sRNA sbrA
1927 SBRMV1_UPD-PKd RF01109 Cis-reg; 2 2 Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR
1928 SBRMV1_UPD-PKf RF01107 Cis-reg; 2 2 Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR
1929 SBWMV1_UPD-PKb RF01106 Cis-reg; 2 1 Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR
1930 SBWMV1_UPD-PKe RF01081 Cis-reg; 3 3 Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR
1931 SBWMV1_UPD-PKh RF01082 Cis-reg; 2 3 Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR
1932 SBWMV2_UPD-PKb RF01104 Cis-reg; 3 1 Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR
1933 SBWMV2_UPD-PKk RF01111 Cis-reg; 4 1 Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR
1934 SBWMV2_UPD-PKl RF01105 Cis-reg; 2 1 Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR
1935 scaDm46E3 RF02670 Gene; snRNA; snoRNA; scaRNA; 2 4 small Cajal body-specific RNA Dm46E3
1936 SCARNA1 RF00553 Gene; snRNA; snoRNA; scaRNA; 29 131 Small Cajal body specific RNA 1
1937 SCARNA11 RF00564 Gene; snRNA; snoRNA; scaRNA; 24 184 Small Cajal body specific RNA 11
1938 SCARNA13 RF00231 Gene; snRNA; snoRNA; scaRNA; 24 136 Small Cajal body specific RNA 13
1939 SCARNA14 RF00582 Gene; snRNA; snoRNA; scaRNA; 22 146 Small Cajal body specific RNA 14
1940 SCARNA15 RF00426 Gene; snRNA; snoRNA; scaRNA; 22 126 Small Cajal body specific RNA 15
1941 SCARNA16 RF00424 Gene; snRNA; snoRNA; scaRNA; 37 176 Small Cajal body specific RNA 16
1942 SCARNA17 RF00492 Gene; snRNA; snoRNA; scaRNA; 6 70 small Cajal body-specific RNA 17
1943 SCARNA18 RF00283 Gene; snRNA; snoRNA; scaRNA; 20 104 small Cajal body-specific RNA 18
1944 SCARNA2 RF01268 Gene; snRNA; snoRNA; scaRNA; 20 83 Small Cajal body-specific RNA 2
1945 SCARNA20 RF00601 Gene; snRNA; snoRNA; scaRNA; 5 191 Small Cajal body specific RNA 20
1946 SCARNA21 RF00602 Gene; snRNA; snoRNA; scaRNA; 24 94 Small Cajal body specific RNA 21
1947 SCARNA23 RF00427 Gene; snRNA; snoRNA; scaRNA; 18 87 Small Cajal body specific RNA 23
1948 SCARNA24 RF00422 Gene; snRNA; snoRNA; scaRNA; 23 166 Small Cajal body specific RNA 24
1949 SCARNA3 RF00565 Gene; snRNA; snoRNA; scaRNA; 23 136 Small Cajal body specific RNA 3
1950 SCARNA4 RF00423 Gene; snRNA; snoRNA; scaRNA; 24 137 Small Cajal body specific RNA 4
1951 SCARNA6 RF00478 Gene; snRNA; snoRNA; scaRNA; 17 214 Small Cajal body specific RNA 6
1952 SCARNA7 RF01295 Gene; snRNA; snoRNA; scaRNA; 18 101 Small Cajal body-specific RNA 7
1953 SCARNA8 RF00286 Gene; snRNA; snoRNA; scaRNA; 22 190 Small Cajal body specific RNA 8
1954 sca_ncR14 RF02718 Gene; snRNA; snoRNA; scaRNA; 4 12 Small Cajal body specific RNA ncR14
1955 sca_ncR20 RF02719 Gene; snRNA; snoRNA; scaRNA; 2 1 Small Cajal body specific RNA ncR20
1956 sca_ncR21 RF02720 Gene; snRNA; snoRNA; scaRNA; 2 3 Small Cajal body specific RNA ncR21
1957 sca_ncR26 RF02721 Gene; snRNA; snoRNA; scaRNA; 2 12 Small Cajal body specific RNA ncR26
1958 sca_ncR27 RF02722 Gene; snRNA; snoRNA; scaRNA; 4 3 Small Cajal body specific RNA ncR27
1959 Scr1601 RF02830 Gene; sRNA; 6 178 Streptomyces RNA 1601
1960 Scr2736 RF02831 Gene; sRNA; 4 167 Streptomyces RNA 2736
1961 Scr3202 RF02833 Gene; sRNA; 4 80 Streptomyces RNA 3202
1962 Scr3920 RF02828 Gene; sRNA; 6 136 Streptomyces RNA 3920
1963 Scr4115 RF02829 Gene; sRNA; 6 178 Streptomyces RNA 4115
1964 scr4677 RF02673 Gene; sRNA; 12 282 Streptomyces sRNA 4677
1965 scr5239 RF02605 Gene; sRNA; 6 179 Streptomyces sRNA scr5239
1966 Scr5676 RF02832 Gene; sRNA; 5 164 Streptomyces RNA 5676
1967 Scr6106 RF02827 Gene; sRNA; 4 66 Streptomyces RNA 6106
1968 Scr6925 RF02826 Gene; sRNA; 4 42 Streptomyces RNA 6925
1969 SdsR_RyeB RF00111 Gene; sRNA; 17 222 SdsR_RyeB RNA
1970 SECIS_1 RF00031 Cis-reg; 61 611 Selenocysteine insertion sequence 1
1971 SECIS_2 RF01988 Cis-reg; 4 56 Selenocysteine insertion sequence 2
1972 SECIS_3 RF01989 Cis-reg; 24 454 Selenocysteine insertion sequence 3
1973 SECIS_4 RF01990 Cis-reg; 24 317 Selenocysteine insertion sequence 4
1974 SECIS_5 RF01991 Cis-reg; 3 25 Selenocysteine insertion sequence 5
1975 serC RF00517 Cis-reg; leader; 70 557 serC leader
1976 Sernc350 RF02735 Gene; antisense; 2 463 Saccharopolyspora sRNA 350
1977 Sernc389 RF02743 Gene; antisense; 2 33 Saccharopolyspora sRNA 389
1978 SgrS RF00534 Gene; antisense; 8 49 SgrS RNA
1979 shuA_thermo RF02597 Cis-reg; thermoregulator; 5 1 shuA/chuA 5' UTR thermoregulator
1980 SIB_RNA RF00113 Gene; antitoxin; 17 37 Short Intergenic Abundant RNA
1981 Six3os1_1 RF02246 Gene; lncRNA; 9 34 Six3os1 conserved region 1
1982 Six3os1_2 RF02247 Gene; lncRNA; 15 36 Six3os1 conserved region 2
1983 Six3os1_3 RF02248 Gene; lncRNA; 10 36 Six3os1 conserved region 3
1984 Six3os1_4 RF02249 Gene; lncRNA; 7 36 Six3os1 conserved region 4
1985 Six3os1_5 RF02250 Gene; lncRNA; 15 104 Six3os1 conserved region 5
1986 Six3os1_6 RF02251 Gene; lncRNA; 4 15 Six3os1 conserved region 6
1987 Six3os1_7 RF02252 Gene; lncRNA; 5 110 Six3os1 conserved region 7
1988 skipping-rope RF02924 Gene; sRNA; 1,426 173 skipping-rope RNA
1989 SL1 RF00198 Gene; 28 943 SL1 RNA
1990 SL2 RF00199 Gene; 30 345 SL2 RNA
1991 SMAD5-AS1_1 RF02173 Gene; lncRNA; 18 36 SMAD5 antisense RNA 1 conserved region 1
1992 SMAD5-AS1_2 RF02174 Gene; lncRNA; 20 35 SMAD5 antisense RNA 1 conserved region 2
1993 SMAD5-AS1_3 RF02175 Gene; lncRNA; 18 34 SMAD5 antisense RNA 1 conserved region 3
1994 SMAD5-AS1_4 RF02176 Gene; lncRNA; 19 34 SMAD5 antisense RNA 1 conserved region 4
1995 SMCR2_1 RF02177 Gene; lncRNA; 6 22 Smith-Magenis syndrome chromosome region, candidate 2 conserved region 1
1996 SMCR2_2 RF02178 Gene; lncRNA; 5 18 Smith-Magenis syndrome chromosome region, candidate 2 conserved region 2
1997 SMK_box_riboswitch RF01767 Cis-reg; riboswitch; 25 176 SMK box translational riboswitch
1998 SmY RF01844 Gene; snRNA; splicing; 61 261 SmY spliceosomal RNA
1999 sn1185 RF01157 Gene; snRNA; snoRNA; CD-box; 5 7 Small nucleolar RNA sn1185
2000 sn1502 RF01189 Gene; snRNA; snoRNA; CD-box; 4 6 Small nucleolar RNA sn1502
2001 sn2317 RF01165 Gene; snRNA; snoRNA; CD-box; 4 6 Small nucleolar RNA sn2317
2002 sn2343 RF01172 Gene; snRNA; snoRNA; CD-box; 3 6 Small nucleolar RNA sn2343
2003 sn2417 RF01222 Gene; snRNA; snoRNA; CD-box; 3 7 Small nucleolar RNA sn2417
2004 sn2429 RF01167 Gene; snRNA; snoRNA; CD-box; 4 6 Small nucleolar RNA sn2429
2005 sn2524 RF01212 Gene; snRNA; snoRNA; CD-box; 2 46 Small nucleolar RNA sn2524
2006 sn2841 RF01160 Gene; snRNA; snoRNA; CD-box; 2 14 Small nucleolar RNA sn2841
2007 sn2903 RF01194 Gene; snRNA; snoRNA; CD-box; 4 22 Small nucleolar RNA sn2903
2008 sn2991 RF01202 Gene; snRNA; snoRNA; CD-box; 4 9 Small nucleolar RNA sn2991
2009 sn3060 RF01153 Gene; snRNA; snoRNA; CD-box; 3 12 Small nucleolar RNA sn3060
2010 sn3071 RF01166 Gene; snRNA; snoRNA; CD-box; 2 14 Small nucleolar RNA sn3071
2011 sn668 RF01162 Gene; snRNA; snoRNA; CD-box; 6 21 Small nucleolar RNA sn668
2012 snaR-A RF02556 Gene; sRNA; 5 40 snaR-A sRNA
2013 snoCD11 RF00538 Gene; snRNA; snoRNA; CD-box; 26 33 Small nucleolar RNA CD11
2014 snoF1_F2 RF00482 Gene; snRNA; snoRNA; HACA-box; 8 132 Small nucleolar RNA F1/F2/snoR5a
2015 snoJ26 RF00336 Gene; snRNA; snoRNA; CD-box; 5 41 Small nucleolar RNA J26
2016 snoJ33 RF00315 Gene; snRNA; snoRNA; CD-box; 5 262 Small nucleolar RNA J33
2017 snoM1 RF00293 Gene; snRNA; snoRNA; HACA-box; 7 3 Small nucleolar RNA snoM1
2018 snoMBII-202 RF00324 Gene; snRNA; snoRNA; CD-box; 30 170 Small nucleolar RNA MBII-202
2019 snoMe18S-Gm1358 RF00533 Gene; snRNA; snoRNA; CD-box; 12 24 Small nucleolar RNA Me18S-Gm1358
2020 snoMe18S-Um1356 RF00532 Gene; snRNA; snoRNA; CD-box; 21 41 Small nucleolar RNA Me18S-Um1356
2021 snoMe28S-Am2589 RF00529 Gene; snRNA; snoRNA; CD-box; 16 94 Small nucleolar RNA Me28S-Am2589
2022 snoMe28S-Am2634 RF00537 Gene; snRNA; snoRNA; CD-box; 18 30 Small nucleolar RNA Me28S-Am2634
2023 snoMe28S-Am982 RF00535 Gene; snRNA; snoRNA; CD-box; 13 47 Small nucleolar RNA Me28S-Am982
2024 snoMe28S-Cm2645 RF00530 Gene; snRNA; snoRNA; CD-box; 20 56 Small nucleolar RNA Me28S-Cm2645
2025 snoMe28S-Cm3227 RF00536 Gene; snRNA; snoRNA; CD-box; 13 32 Small nucleolar RNA Me28S-Cm3227
2026 snoMe28S-Cm788 RF00539 Gene; snRNA; snoRNA; CD-box; 5 19 Small nucleolar RNA Me28S-Cm788
2027 snoMe28S-G3255 RF00527 Gene; snRNA; snoRNA; CD-box; 10 19 Small nucleolar RNA Me28S-Gm3255
2028 snoMe28S-Gm1083 RF00528 Gene; snRNA; snoRNA; CD-box; 11 68 Small nucleolar RNA Me28S-Gm1083
2029 snoMe28S-Gm3113 RF00531 Gene; snRNA; snoRNA; CD-box; 15 23 Small nucleolar RNA Me28S-Gm3113
2030 snoMe28S-U3344 RF00526 Gene; snRNA; snoRNA; CD-box; 8 37 Small nucleolar RNA Me28S-U3344
2031 snopsi18S-1377 RF00543 Gene; snRNA; snoRNA; HACA-box; 15 78 Small nucleolar RNA psi18S-1377
2032 snopsi18S-1854 RF00540 Gene; snRNA; snoRNA; HACA-box; 16 45 Small nucleolar RNA psi18S-1854
2033 snopsi18S-841 RF00545 Gene; snRNA; snoRNA; HACA-box; 24 59 Small nucleolar RNA psi18S-841/snoR66
2034 snopsi28S-1192 RF00542 Gene; snRNA; snoRNA; HACA-box; 15 65 Small nucleolar RNA psi28S-1192
2035 snopsi28S-2876 RF00541 Gene; snRNA; snoRNA; HACA-box; 8 13 Small nucleolar RNA psi28S-2876
2036 snopsi28S-3316 RF00546 Gene; snRNA; snoRNA; HACA-box; 33 50 Small nucleolar RNA psi28S-3316
2037 snopsi28S-3327 RF00544 Gene; snRNA; snoRNA; HACA-box; 14 39 Small nucleolar RNA psi28S-3327
2038 snopsi28S-3378 RF02714 Gene; snRNA; snoRNA; HACA-box; 8 9 Small nucleolar RNA psi28S-3378
2039 snoPyro_CD RF00095 Gene; snRNA; snoRNA; CD-box; 25 112 Pyrococcus C/D box small nucleolar RNA
2040 snoR01 RF01583 Gene; snRNA; snoRNA; CD-box; 3 22 small nucleolar RNA snoR01
2041 snoR03 RF01584 Gene; snRNA; snoRNA; HACA-box; 2 9 small nucleolar RNA snoR03
2042 snoR07 RF01585 Gene; snRNA; snoRNA; CD-box; 4 24 small nucleolar RNA snoR07
2043 snoR09 RF01586 Gene; snRNA; snoRNA; CD-box; 3 17 small nucleolar RNA snoR09
2044 snoR1 RF00345 Gene; snRNA; snoRNA; CD-box; 13 232 Small nucleolar RNA snoR1
2045 snoR10 RF01587 Gene; snRNA; snoRNA; CD-box; 4 24 small nucleolar RNA snoR10
2046 snoR100 RF01219 Gene; snRNA; snoRNA; HACA-box; 9 226 Small nucleolar RNA snoR100
2047 snoR101 RF01155 Gene; snRNA; snoRNA; CD-box; 5 189 Small nucleolar RNA snoR101
2048 snoR103 RF01213 Gene; snRNA; snoRNA; HACA-box; 11 295 Small nucleolar RNA snoR103
2049 snoR104 RF01220 Gene; snRNA; snoRNA; HACA-box; 8 220 Small nucleolar RNA snoR104
2050 snoR109 RF01206 Gene; snRNA; snoRNA; HACA-box; 6 194 Small nucleolar RNA snoR109
2051 snoR11 RF00349 Gene; snRNA; snoRNA; CD-box; 5 283 Small nucleolar RNA R11/Z151
2052 snoR110 RF01180 Gene; snRNA; snoRNA; HACA-box; 2 25 Small nucleolar RNA snoR110
2053 snoR111 RF01228 Gene; snRNA; snoRNA; HACA-box; 6 163 Small nucleolar RNA snoR111
2054 snoR113 RF01420 Gene; snRNA; snoRNA; CD-box; 5 152 Small nucleolar RNA snoR113
2055 snoR114 RF01421 Gene; snRNA; snoRNA; CD-box; 24 482 small nucleolar RNA snoR114
2056 snoR116 RF01422 Gene; snRNA; snoRNA; CD-box; 5 90 small nucleolar RNA snoR116
2057 snoR117 RF01423 Gene; snRNA; snoRNA; CD-box; 6 152 small nucleolar RNA snoR117
2058 snoR118 RF01424 Gene; snRNA; snoRNA; CD-box; 8 227 small nucleolar RNA snoR118
2059 snoR12 RF00204 Gene; snRNA; snoRNA; CD-box; 9 392 Small nucleolar RNA R12
2060 snoR120 RF02406 Gene; snRNA; snoRNA; CD-box; 4 20 Small nucleolar RNA snoR120
2061 snoR121 RF01425 Gene; snRNA; snoRNA; CD-box; 2 14 small nucleolar RNA snoR121
2062 snoR122 RF02407 Gene; snRNA; snoRNA; CD-box; 4 94 Small nucleolar RNA snoR122
2063 snoR124 RF02408 Gene; snRNA; snoRNA; CD-box; 5 15 Small nucleolar RNA snoR124
2064 snoR125 RF02409 Gene; snRNA; snoRNA; CD-box; 5 11 Small nucleolar RNA snoR125
2065 snoR126 RF01426 Gene; snRNA; snoRNA; CD-box; 4 169 small nucleolar RNA snoR126
2066 snoR127 RF01427 Gene; snRNA; snoRNA; CD-box; 3 92 small nucleolar RNA snoR127
2067 snoR128 RF01428 Gene; snRNA; snoRNA; CD-box; 5 215 small nucleolar RNA snoR128
2068 snoR13 RF01588 Gene; snRNA; snoRNA; CD-box; 4 48 small nucleolar RNA snoR13
2069 snoR130 RF01429 Gene; snRNA; snoRNA; CD-box; 2 32 small nucleolar RNA snoR130
2070 snoR134 RF01430 Gene; snRNA; snoRNA; HACA-box; 5 278 small nucleolar RNA snoR134
2071 snoR135 RF01431 Gene; snRNA; snoRNA; HACA-box; 6 278 small nucleolar RNA snoR135
2072 snoR136 RF02410 Gene; snRNA; snoRNA; HACA-box; 8 167 Small nucleolar RNA snoR136
2073 snoR137 RF01433 Gene; snRNA; snoRNA; HACA-box; 4 252 small nucleolar RNA snoR137
2074 snoR138 RF02411 Gene; snRNA; snoRNA; HACA-box; 7 92 Small nucleolar RNA snoR138
2075 snoR14 RF01280 Gene; snRNA; snoRNA; CD-box; 7 185 Small nucleolar RNA snoR14
2076 snoR143 RF01432 Gene; snRNA; snoRNA; HACA-box; 3 217 small nucleolar RNA snoR143
2077 snoR144 RF02412 Gene; snRNA; snoRNA; HACA-box; 4 15 Small nucleolar RNA snoR144
2078 snoR145 RF02413 Gene; snRNA; snoRNA; HACA-box; 19 91 Small nucleolar RNA snoR145
2079 snoR15 RF01591 Gene; snRNA; snoRNA; CD-box; 4 25 small nucleolar RNA snoR15
2080 snoR16 RF00296 Gene; snRNA; snoRNA; CD-box; 18 305 Small nucleolar RNA R16
2081 snoR160 RF00203 Gene; snRNA; snoRNA; CD-box; 9 321 Small nucleolar RNA R160
2082 snoR17 RF01289 Gene; snRNA; snoRNA; CD-box; 2 20 Small nucleolar RNA snoR17
2083 snoR18 RF01594 Gene; snRNA; snoRNA; CD-box; 3 24 small nucleolar RNA snoR18
2084 snoR19 RF01595 Gene; snRNA; snoRNA; CD-box; 4 24 small nucleolar RNA snoR19
2085 snoR2 RF01292 Gene; snRNA; snoRNA; HACA-box; 11 293 Small nucleolar RNA snoR2/U65
2086 snoR20 RF00351 Gene; snRNA; snoRNA; CD-box; 4 53 Small nucleolar RNA R20
2087 snoR20a RF01193 Gene; snRNA; snoRNA; CD-box; 5 145 Small nucleolar RNA snoR20a
2088 snoR21 RF00352 Gene; snRNA; snoRNA; CD-box; 6 140 Small nucleolar RNA R21
2089 snoR22 RF01597 Gene; snRNA; snoRNA; CD-box; 3 33 small nucleolar RNA snoR22
2090 snoR23 RF01598 Gene; snRNA; snoRNA; CD-box; 3 23 small nucleolar RNA snoR23
2091 snoR24 RF00132 Gene; snRNA; snoRNA; CD-box; 12 509 Small nucleolar RNA R24
2092 snoR25 RF01600 Gene; snRNA; snoRNA; CD-box; 4 24 small nucleolar RNA snoR25
2093 snoR26 RF01286 Gene; snRNA; snoRNA; CD-box; 8 203 Small nucleolar RNA snoR26
2094 snoR27 RF01287 Gene; snRNA; snoRNA; CD-box; 6 175 Small nucleolar RNA snoR27
2095 snoR28 RF00355 Gene; snRNA; snoRNA; CD-box; 9 109 Small nucleolar RNA snoR28
2096 snoR29 RF01603 Gene; snRNA; snoRNA; CD-box; 3 22 small nucleolar RNA snoR29
2097 snoR30 RF00046 Gene; snRNA; snoRNA; CD-box; 6 219 Small nucleolar RNA R30/Z108
2098 snoR31 RF01288 Gene; snRNA; snoRNA; CD-box; 6 193 Small nucleolar RNA snoR31
2099 snoR31_Z110_Z27 RF00353 Gene; snRNA; snoRNA; CD-box; 8 230 Small nucleolar RNA snoR31/Z110/Z27
2100 snoR32_R81 RF00356 Gene; snRNA; snoRNA; CD-box; 6 81 Small nucleolar RNA R32/R81/Z41
2101 snoR35 RF01281 Gene; snRNA; snoRNA; CD-box; 12 199 Small nucleolar RNA snoR35
2102 snoR38 RF00213 Gene; snRNA; snoRNA; CD-box; 19 715 Small nucleolar RNA R38
2103 snoR4 RF01171 Gene; snRNA; snoRNA; CD-box; 2 1 Small nucleolar RNA snoR4
2104 snoR41 RF00205 Gene; snRNA; snoRNA; CD-box; 7 171 Small nucleolar RNA R41
2105 snoR43 RF00316 Gene; snRNA; snoRNA; CD-box; 16 11 Small nucleolar RNA R43
2106 snoR442 RF01232 Gene; snRNA; snoRNA; CD-box; 10 18 Small nucleolar RNA R442
2107 snoR44_J54 RF00357 Gene; snRNA; snoRNA; CD-box; 29 435 Small nucleolar RNA R44/J54/Z268 family
2108 snoR4a RF01301 Gene; snRNA; snoRNA; CD-box; 2 36 Small nucleolar RNA snoR4a
2109 snoR53 RF00338 Gene; snRNA; snoRNA; CD-box; 5 9 Small nucleolar RNA snR53
2110 snoR53Y RF01279 Gene; snRNA; snoRNA; CD-box; 7 176 Small nucleolar RNA snoR53Y
2111 snoR60 RF00339 Gene; snRNA; snoRNA; CD-box; 10 366 Small nucleolar RNA snoR60
2112 snoR639 RF00291 Gene; snRNA; snoRNA; HACA-box; 9 38 Small nucleolar RNA snoR639/H1
2113 snoR64 RF00267 Gene; snRNA; snoRNA; CD-box; 14 314 Small nucleolar RNA R64/Z200 family
2114 snoR64a RF01163 Gene; snRNA; snoRNA; CD-box; 4 109 Small nucleolar RNA snoR64a
2115 snoR66 RF00202 Gene; snRNA; snoRNA; CD-box; 6 232 Small nucleolar RNA R66
2116 snoR69Y RF01198 Gene; snRNA; snoRNA; CD-box; 7 282 Small nucleolar RNA snoR69Y
2117 snoR71 RF00097 Gene; snRNA; snoRNA; CD-box; 25 60,585 Plant small nucleolar RNA R71
2118 snoR72 RF00208 Gene; snRNA; snoRNA; CD-box; 5 27 Small nucleolar RNA R72
2119 snoR74 RF01231 Gene; snRNA; snoRNA; HACA-box; 9 457 Small nucleolar RNA snoR74
2120 SNOR75 RF02539 Gene; snRNA; snoRNA; CD-box; 6 398 Plant small nucleolar RNA SNOR75
2121 snoR77 RF01230 Gene; snRNA; snoRNA; HACA-box; 5 226 Small nucleolar RNA snoR77
2122 snoR77Y RF01178 Gene; snRNA; snoRNA; CD-box; 21 217 Small nucleolar RNA snoR77Y
2123 snoR79 RF00323 Gene; snRNA; snoRNA; CD-box; 5 4 Small nucleolar RNA R79
2124 snoR80 RF01224 Gene; snRNA; snoRNA; HACA-box; 9 248 Small nucleolar RNA snoR80
2125 snoR83 RF01227 Gene; snRNA; snoRNA; HACA-box; 7 301 Small nucleolar RNA snoR83
2126 snoR86 RF00303 Gene; snRNA; snoRNA; HACA-box; 11 278 Small nucleolar RNA snoR86
2127 snoR8a RF01284 Gene; snRNA; snoRNA; CD-box; 7 383 Small nucleolar RNA snoR8a
2128 snoR9 RF00065 Gene; snRNA; snoRNA; CD-box; 5 8 Small nucleolar RNA snoR9
2129 snoR97 RF01215 Gene; snRNA; snoRNA; HACA-box; 7 263 Small nucleolar RNA snoR97
2130 snoR98 RF00307 Gene; snRNA; snoRNA; HACA-box; 4 88 Small nucleolar RNA snoR98
2131 snoR99 RF01208 Gene; snRNA; snoRNA; HACA-box; 9 251 Small nucleolar RNA snoR99
2132 snoR9_plant RF00348 Gene; snRNA; snoRNA; CD-box; 7 108 Small nucleolar RNA snoR9
2133 SNORA1 RF00408 Gene; snRNA; snoRNA; HACA-box; 29 299 Small nucleolar RNA SNORA1
2134 SNORA11 RF00614 Gene; snRNA; snoRNA; HACA-box; 35 612 Small nucleolar RNA SNORA11
2135 SNORA12 RF00586 Gene; snRNA; snoRNA; HACA-box; 23 140 Small nucleolar RNA SNORA12
2136 SNORA13 RF00396 Gene; snRNA; snoRNA; HACA-box; 50 171 Small nucleolar RNA SNORA13
2137 SNORA14 RF00397 Gene; snRNA; snoRNA; HACA-box; 18 151 Small nucleolar RNA SNORA14
2138 SNORA15 RF00398 Gene; snRNA; snoRNA; HACA-box; 22 196 Small nucleolar RNA SNORA15
2139 SNORA16 RF00190 Gene; snRNA; snoRNA; HACA-box; 29 288 Small nucleolar RNA SNORA16B/SNORA16A family
2140 SNORA17 RF00560 Gene; snRNA; snoRNA; HACA-box; 53 1,690 Small nucleolar RNA SNORA17
2141 SNORA18 RF00425 Gene; snRNA; snoRNA; HACA-box; 29 328 Small nucleolar RNA SNORA18
2142 SNORA19 RF00413 Gene; snRNA; snoRNA; HACA-box; 34 262 Small nucleolar RNA SNORA19
2143 SNORA2 RF00410 Gene; snRNA; snoRNA; HACA-box; 18 1,217 Small nucleolar RNA SNORA2/SNORA34 family
2144 SNORA20 RF00401 Gene; snRNA; snoRNA; HACA-box; 17 120 Small nucleolar RNA SNORA20
2145 SNORA21 RF00412 Gene; snRNA; snoRNA; HACA-box; 5 191 Small nucleolar RNA SNORA21
2146 SNORA22 RF00414 Gene; snRNA; snoRNA; HACA-box; 31 171 Small nucleolar RNA SNORA22
2147 SNORA23 RF00319 Gene; snRNA; snoRNA; HACA-box; 9 177 Small nucleolar RNA SNORA23
2148 SNORA24 RF00399 Gene; snRNA; snoRNA; HACA-box; 5 204 Small nucleolar RNA SNORA24
2149 SNORA25 RF00402 Gene; snRNA; snoRNA; HACA-box; 30 266 Small nucleolar RNA SNORA25
2150 SNORA26 RF00568 Gene; snRNA; snoRNA; HACA-box; 76 408 Small nucleolar RNA SNORA26
2151 SNORA27 RF00443 Gene; snRNA; snoRNA; HACA-box; 24 175 Small nucleolar RNA SNORA27
2152 SNORA28 RF00400 Gene; snRNA; snoRNA; HACA-box; 26 217 Small nucleolar RNA SNORA28
2153 SNORA29 RF00429 Gene; snRNA; snoRNA; HACA-box; 26 220 Small nucleolar RNA SNORA29
2154 SNORA3 RF00334 Gene; snRNA; snoRNA; HACA-box; 6 390 Small nucleolar RNA SNORA3/SNORA45 family
2155 SNORA30 RF00415 Gene; snRNA; snoRNA; HACA-box; 11 109 Small nucleolar RNA SNORA30/SNORA37 family
2156 SNORA31 RF00322 Gene; snRNA; snoRNA; HACA-box; 5 444 Small nucleolar RNA SNORA31
2157 SNORA32 RF00421 Gene; snRNA; snoRNA; HACA-box; 9 181 Small nucleolar RNA SNORA32
2158 SNORA33 RF00438 Gene; snRNA; snoRNA; HACA-box; 28 235 Small nucleolar RNA SNORA33
2159 SNORA35 RF00566 Gene; snRNA; snoRNA; HACA-box; 29 162 Small nucleolar RNA SNORA35
2160 SNORA36 RF00340 Gene; snRNA; snoRNA; HACA-box; 6 276 Small nucleolar RNA SNORA36 family
2161 SNORA38 RF00428 Gene; snRNA; snoRNA; HACA-box; 25 188 Small nucleolar RNA SNORA38
2162 SNORA4 RF00394 Gene; snRNA; snoRNA; HACA-box; 7 95 Small nucleolar RNA SNORA4
2163 SNORA40 RF00561 Gene; snRNA; snoRNA; HACA-box; 28 823 Small nucleolar RNA SNORA40
2164 SNORA41 RF00403 Gene; snRNA; snoRNA; HACA-box; 31 141 Small nucleolar RNA SNORA41
2165 SNORA42 RF00406 Gene; snRNA; snoRNA; HACA-box; 21 422 Small nucleolar RNA SNORA42/SNORA80 family
2166 SNORA43 RF00416 Gene; snRNA; snoRNA; HACA-box; 21 120 Small nucleolar RNA SNORA43
2167 SNORA44 RF00405 Gene; snRNA; snoRNA; HACA-box; 27 314 Small nucleolar RNA SNORA44
2168 SNORA46 RF00404 Gene; snRNA; snoRNA; HACA-box; 22 105 Small nucleolar RNA SNORA46
2169 SNORA47 RF01234 Gene; snRNA; snoRNA; HACA-box; 20 118 Small nucleolar RNA SNORA47
2170 SNORA48 RF00554 Gene; snRNA; snoRNA; HACA-box; 24 1,003 Small nucleolar RNA SNORA48
2171 SNORA49 RF00562 Gene; snRNA; snoRNA; HACA-box; 21 132 Small nucleolar RNA SNORA49
2172 SNORA5 RF00392 Gene; snRNA; snoRNA; HACA-box; 6 413 Small nucleolar RNA SNORA5
2173 SNORA50 RF00407 Gene; snRNA; snoRNA; HACA-box; 14 120 Small nucleolar RNA SNORA50
2174 SNORA51 RF00432 Gene; snRNA; snoRNA; HACA-box; 9 591 Small nucleolar RNA SNORA51
2175 SNORA52 RF00419 Gene; snRNA; snoRNA; HACA-box; 21 114 Small nucleolar RNA SNORA52
2176 SNORA53 RF00563 Gene; snRNA; snoRNA; HACA-box; 28 189 Small nucleolar RNA SNORA53
2177 SNORA54 RF00430 Gene; snRNA; snoRNA; HACA-box; 5 214 Small nucleolar RNA SNORA54
2178 SNORA55 RF00431 Gene; snRNA; snoRNA; HACA-box; 29 240 Small nucleolar RNA SNORA55
2179 SNORA56 RF00417 Gene; snRNA; snoRNA; HACA-box; 17 34 Small nucleolar RNA SNORA56
2180 SNORA57 RF00191 Gene; snRNA; snoRNA; HACA-box; 26 520 Small nucleolar RNA SNORA57
2181 SNORA58 RF00418 Gene; snRNA; snoRNA; HACA-box; 20 124 Small nucleolar RNA SNORA58
2182 SNORA61 RF00420 Gene; snRNA; snoRNA; HACA-box; 25 202 Small nucleolar RNA SNORA61
2183 SNORA62 RF00091 Gene; snRNA; snoRNA; HACA-box; 18 380 Small nucleolar RNA SNORA62/SNORA6 family
2184 SNORA63 RF00092 Gene; snRNA; snoRNA; HACA-box; 8 233 Small nucleolar RNA SNORA63
2185 SNORA64 RF00264 Gene; snRNA; snoRNA; HACA-box; 9 167 Small nucleolar RNA SNORA64/SNORA10 family
2186 SNORA65 RF00302 Gene; snRNA; snoRNA; HACA-box; 14 184 Small nucleolar RNA SNORA65
2187 SNORA66 RF00155 Gene; snRNA; snoRNA; HACA-box; 25 227 Small nucleolar RNA SNORA66
2188 SNORA67 RF00272 Gene; snRNA; snoRNA; HACA-box; 12 164 Small nucleolar RNA SNORA67
2189 SNORA68 RF00263 Gene; snRNA; snoRNA; HACA-box; 26 247 Small nucleolar RNA SNORA68
2190 SNORA69 RF00265 Gene; snRNA; snoRNA; HACA-box; 16 152 Small nucleolar RNA SNORA69
2191 SNORA7 RF00409 Gene; snRNA; snoRNA; HACA-box; 31 1,698 Small nucleolar RNA SNORA7
2192 SNORA70 RF00156 Gene; snRNA; snoRNA; HACA-box; 43 1,290 Small nucleolar RNA SNORA70
2193 SNORA71 RF00056 Gene; snRNA; snoRNA; HACA-box; 40 384 Small nucleolar RNA SNORA71
2194 SNORA72 RF00139 Gene; snRNA; snoRNA; HACA-box; 29 334 Small nucleolar RNA SNORA72
2195 SNORA73 RF00045 Gene; snRNA; snoRNA; HACA-box; 66 513 Small nucleolar RNA SNORA73 family
2196 SNORA74 RF00090 Gene; snRNA; snoRNA; HACA-box; 24 250 Small nucleolar RNA SNORA74
2197 SNORA75 RF00072 Gene; snRNA; snoRNA; HACA-box; 6 100 Small nucleolar RNA SNORA75
2198 SNORA76 RF00598 Gene; snRNA; snoRNA; HACA-box; 22 221 Small nucleolar RNA SNORA76
2199 SNORA77 RF00599 Gene; snRNA; snoRNA; HACA-box; 19 186 Small nucleolar RNA SNORA77
2200 SNORA79 RF00600 Gene; snRNA; snoRNA; HACA-box; 25 190 Small nucleolar RNA SNORA79
2201 SNORA8 RF00393 Gene; snRNA; snoRNA; HACA-box; 5 289 Small nucleolar RNA SNORA8
2202 SNORA81 RF01241 Gene; snRNA; snoRNA; HACA-box; 28 226 Small nucleolar RNA SNORA81
2203 SNORA84 RF01229 Gene; snRNA; snoRNA; HACA-box; 28 139 Small nucleolar RNA SNORA84
2204 SNORA9 RF00411 Gene; snRNA; snoRNA; HACA-box; 36 186 Small nucleolar RNA SNORA9
2205 SNORD10 RF01290 Gene; snRNA; snoRNA; CD-box; 22 90 Small nucleolar RNA SNORD10
2206 SNORD100 RF00609 Gene; snRNA; snoRNA; CD-box; 26 150 Small nucleolar RNA SNORD100
2207 SNORD101 RF00186 Gene; snRNA; snoRNA; CD-box; 26 114 Small nucleolar RNA SNORD101
2208 SNORD102 RF00187 Gene; snRNA; snoRNA; CD-box; 11 88 Small nucleolar RNA SNORD102
2209 SNORD103 RF00188 Gene; snRNA; snoRNA; CD-box; 41 276 Small nucleolar RNA SNORD103/SNORD85
2210 SNORD105 RF00584 Gene; snRNA; snoRNA; CD-box; 15 38 Small nucleolar RNA SNORD105
2211 SNORD107 RF01164 Gene; snRNA; snoRNA; CD-box; 13 40 Small nucleolar RNA SNORD107
2212 SNORD108 RF01158 Gene; snRNA; snoRNA; CD-box; 4 15 Small nucleolar RNA SNORD108
2213 SNORD109A RF01278 Gene; snRNA; snoRNA; CD-box; 7 142 Small nucleolar RNA SNORD109A
2214 SNORD11 RF01182 Gene; snRNA; snoRNA; CD-box; 19 109 Small nucleolar RNA SNORD11
2215 SNORD110 RF00610 Gene; snRNA; snoRNA; CD-box; 16 35 Small nucleolar RNA SNORD110
2216 SNORD111 RF00611 Gene; snRNA; snoRNA; CD-box; 5 144 Small nucleolar RNA SNORD111
2217 SNORD112 RF01169 Gene; snRNA; snoRNA; CD-box; 13 51 Small nucleolar RNA SNORD112
2218 SNORD113 RF00181 Gene; snRNA; snoRNA; CD-box; 59 1,367 Small nucleolar RNA SNORD113/SNORD114 family
2219 SNORD115 RF00105 Gene; snRNA; snoRNA; CD-box; 32 1,184 Small nucleolar RNA SNORD115
2220 SNORD116 RF00108 Gene; snRNA; snoRNA; CD-box; 48 809 Small nucleolar RNA SNORD116
2221 SNORD11B RF01192 Gene; snRNA; snoRNA; CD-box; 37 109 Small nucleolar RNA SNORD11B
2222 SNORD12 RF00581 Gene; snRNA; snoRNA; CD-box; 8 360 Small nucleolar SNORD12/SNORD106
2223 SNORD121A RF01191 Gene; snRNA; snoRNA; CD-box; 26 195 Small nucleolar RNA SNORD121A
2224 SNORD123 RF01156 Gene; snRNA; snoRNA; CD-box; 12 92 Small nucleolar RNA SNORD123
2225 SNORD124 RF01211 Gene; snRNA; snoRNA; CD-box; 18 51 Small nucleolar RNA SNORD124
2226 SNORD125 RF01200 Gene; snRNA; snoRNA; CD-box; 16 83 Small nucleolar RNA SNORD125
2227 SNORD126 RF01168 Gene; snRNA; snoRNA; CD-box; 6 45 Small nucleolar RNA SNORD126
2228 SNORD127 RF01186 Gene; snRNA; snoRNA; CD-box; 13 95 Small nucleolar RNA SNORD127
2229 SNORD14 RF00016 Gene; snRNA; snoRNA; CD-box; 18 1,182 Small nucleolar RNA SNORD14
2230 SNORD15 RF00067 Gene; snRNA; snoRNA; CD-box; 11 276 Small nucleolar RNA SNORD15
2231 SNORD16 RF00138 Gene; snRNA; snoRNA; CD-box; 5 219 Small nucleolar RNA SNORD16
2232 SNORD17 RF00567 Gene; snRNA; snoRNA; CD-box; 19 152 Small nucleolar RNA SNORD17
2233 SNORD18 RF00093 Gene; snRNA; snoRNA; CD-box; 16 655 Small nucleolar RNA SNORD18
2234 SNORD19 RF00569 Gene; snRNA; snoRNA; CD-box; 22 227 Small nucleolar RNA SNORD19
2235 SNORD19B RF01183 Gene; snRNA; snoRNA; CD-box; 17 43 Small nucleolar RNA SNORD19B
2236 SNORD2 RF01299 Gene; snRNA; snoRNA; CD-box; 17 213 Small nucleolar RNA SNORD2
2237 SNORD20 RF00217 Gene; snRNA; snoRNA; CD-box; 13 101 Small nucleolar RNA SNORD20
2238 SNORD21 RF00068 Gene; snRNA; snoRNA; CD-box; 5 98 Small nucleolar RNA SNORD21
2239 SNORD22 RF00099 Gene; snRNA; snoRNA; CD-box; 49 206 Small nucleolar RNA SNORD22
2240 SNORD23 RF00603 Gene; snRNA; snoRNA; CD-box; 15 44 Small nucleolar RNA SNORD23
2241 SNORD24 RF00069 Gene; snRNA; snoRNA; CD-box; 14 781 Small nucleolar RNA SNORD24
2242 SNORD25 RF00054 Gene; snRNA; snoRNA; CD-box; 12 374 Small nucleolar RNA SNORD25
2243 SNORD26 RF00087 Gene; snRNA; snoRNA; CD-box; 17 70 Small nucleolar RNA SNORD26
2244 SNORD27 RF00086 Gene; snRNA; snoRNA; CD-box; 8 71 Small nucleolar RNA SNORD27
2245 SNORD28 RF00085 Gene; snRNA; snoRNA; CD-box; 20 68 Small nucleolar RNA SNORD28
2246 SNORD29 RF00070 Gene; snRNA; snoRNA; CD-box; 10 114 Small nucleolar RNA SNORD29
2247 SNORD30 RF00088 Gene; snRNA; snoRNA; CD-box; 20 78 Small nucleolar RNA SNORD30
2248 SNORD31 RF00089 Gene; snRNA; snoRNA; CD-box; 26 222 Small nucleolar RNA SNORD31
2249 SNORD33 RF00133 Gene; snRNA; snoRNA; CD-box; 72 487 Small nucleolar RNA Z195/SNORD33/SNORD32 family
2250 SNORD34 RF00147 Gene; snRNA; snoRNA; CD-box; 14 443 Small nucleolar RNA SNORD34
2251 SNORD35 RF00211 Gene; snRNA; snoRNA; CD-box; 8 313 Small nucleolar RNA SNORD35
2252 SNORD36 RF00049 Gene; snRNA; snoRNA; CD-box; 59 839 Small nucleolar RNA SNORD36
2253 SNORD37 RF00440 Gene; snRNA; snoRNA; CD-box; 6 117 Small nucleolar RNA SNORD37
2254 SNORD38 RF00212 Gene; snRNA; snoRNA; CD-box; 7 270 Small nucleolar RNA SNORD38
2255 SNORD39 RF00157 Gene; snRNA; snoRNA; CD-box; 20 182 Small nucleolar RNA SNORD55/SNORD39
2256 SNORD41 RF00588 Gene; snRNA; snoRNA; CD-box; 20 111 Small nucleolar RNA SNORD41
2257 SNORD42 RF00150 Gene; snRNA; snoRNA; CD-box; 7 172 Small nucleolar RNA SNORD42
2258 SNORD43 RF00221 Gene; snRNA; snoRNA; CD-box; 4 79 Small nucleolar RNA SNORD43
2259 SNORD44 RF00287 Gene; snRNA; snoRNA; CD-box; 12 60 Small nucleolar RNA SNORD44
2260 SNORD45 RF00279 Gene; snRNA; snoRNA; CD-box; 11 336 Small nucleolar RNA SNORD45
2261 SNORD46 RF00218 Gene; snRNA; snoRNA; CD-box; 5 131 Small nucleolar RNA SNORD46
2262 SNORD47 RF00281 Gene; snRNA; snoRNA; CD-box; 20 129 Small nucleolar RNA SNORD47
2263 SNORD48 RF00282 Gene; snRNA; snoRNA; CD-box; 8 50 Small nucleolar RNA SNORD48
2264 SNORD49 RF00277 Gene; snRNA; snoRNA; CD-box; 28 201 Small nucleolar RNA SNORD49
2265 SNORD5 RF01161 Gene; snRNA; snoRNA; CD-box; 20 117 Small nucleolar RNA SNORD5
2266 SNORD50 RF00278 Gene; snRNA; snoRNA; CD-box; 26 295 Small nucleolar RNA SNORD50
2267 SNORD51 RF00280 Gene; snRNA; snoRNA; CD-box; 14 107 Small nucleolar RNA SNORD51
2268 SNORD52 RF00276 Gene; snRNA; snoRNA; CD-box; 20 66 Small nucleolar RNA SNORD52
2269 SNORD53_SNORD92 RF00325 Gene; snRNA; snoRNA; CD-box; 37 396 Small nucleolar RNA SNORD53/SNORD92
2270 SNORD56 RF00275 Gene; snRNA; snoRNA; CD-box; 7 154 Small nucleolar RNA SNORD56
2271 SNORD57 RF00274 Gene; snRNA; snoRNA; CD-box; 23 100 Small nucleolar RNA SNORD57
2272 SNORD58 RF00151 Gene; snRNA; snoRNA; CD-box; 33 422 Small nucleolar RNA SNORD58
2273 SNORD59 RF00273 Gene; snRNA; snoRNA; CD-box; 24 219 Small nucleolar RNA SNORD59
2274 SNORD60 RF00271 Gene; snRNA; snoRNA; CD-box; 22 131 Small nucleolar RNA SNORD60
2275 SNORD61 RF00270 Gene; snRNA; snoRNA; CD-box; 36 165 Small nucleolar RNA SNORD61
2276 SNORD62 RF00153 Gene; snRNA; snoRNA; CD-box; 14 152 Small nucleolar RNA SNORD62
2277 SNORD63 RF00154 Gene; snRNA; snoRNA; CD-box; 23 127 Small nucleolar RNA SNORD63
2278 SNORD64 RF00570 Gene; snRNA; snoRNA; CD-box; 17 40 Small Nucleolar RNA SNORD64
2279 SNORD65 RF00571 Gene; snRNA; snoRNA; CD-box; 26 200 Small nucleolar RNA SNORD65
2280 SNORD66 RF00572 Gene; snRNA; snoRNA; CD-box; 20 219 Small nucleolar RNA SNORD66
2281 SNORD67 RF00573 Gene; snRNA; snoRNA; CD-box; 15 139 Small nucleolar RNA SNORD67
2282 SNORD69 RF00574 Gene; snRNA; snoRNA; CD-box; 11 93 Small nucleolar RNA SNORD69
2283 SNORD70 RF00575 Gene; snRNA; snoRNA; CD-box; 21 202 Small nucleolar RNA SNORD70
2284 SNORD71 RF00576 Gene; snRNA; snoRNA; HACA-box; 18 104 Small nucleolar RNA SNORD71
2285 SNORD72 RF00577 Gene; snRNA; snoRNA; CD-box; 16 113 Small nucleolar RNA SNORD72
2286 SNORD73 RF00071 Gene; snRNA; snoRNA; CD-box; 25 153 Small nucleolar RNA SNORD73
2287 SNORD74 RF00284 Gene; snRNA; snoRNA; CD-box; 22 184 Small nucleolar RNA SNORD74
2288 SNORD75 RF00612 Gene; snRNA; snoRNA; CD-box; 5 126 Small nucleolar RNA SNORD75
2289 SNORD77 RF00591 Gene; snRNA; snoRNA; CD-box; 21 105 Small nucleolar RNA SNORD77
2290 SNORD78 RF00592 Gene; snRNA; snoRNA; CD-box; 19 97 Small nucleolar RNA SNORD78
2291 SNORD79 RF00152 Gene; snRNA; snoRNA; CD-box; 28 123 Small nucleolar RNA SNORD79
2292 SNORD81 RF00136 Gene; snRNA; snoRNA; CD-box; 22 85 Small nucleolar RNA SNORD81
2293 SNORD82 RF00158 Gene; snRNA; snoRNA; CD-box; 27 114 Small nucleolar RNA SNORD82
2294 SNORD83 RF00137 Gene; snRNA; snoRNA; CD-box; 7 252 Small nucleolar RNA SNORD83
2295 SNORD86 RF00594 Gene; snRNA; snoRNA; CD-box; 6 63 Small nucleolar RNA SNORD86
2296 SNORD87 RF00439 Gene; snRNA; snoRNA; CD-box; 10 101 Small nucleolar RNA SNORD87
2297 SNORD88 RF00604 Gene; snRNA; snoRNA; CD-box; 35 222 Small nucleolar RNA SNORD88
2298 SNORD89 RF00578 Gene; snRNA; snoRNA; CD-box; 18 113 Small nucleolar RNA SNORD89
2299 SNORD90 RF00579 Gene; snRNA; snoRNA; CD-box; 18 97 Small nucleolar RNA SNORD90
2300 SNORD91 RF00580 Gene; snRNA; snoRNA; CD-box; 24 168 Small nucleolar RNA SNORD91 family
2301 SNORD93 RF00606 Gene; snRNA; snoRNA; CD-box; 17 102 Small nucleolar RNA SNORD93
2302 SNORD94 RF00613 Gene; snRNA; snoRNA; CD-box; 21 128 Small nucleolar RNA SNORD94
2303 SNORD95 RF00189 Gene; snRNA; snoRNA; CD-box; 7 58 Small nucleolar RNA SNORD95
2304 SNORD96 RF00055 Gene; snRNA; snoRNA; CD-box; 9 388 Small nucleolar RNA SNORD96 family
2305 SNORD97 RF01291 Gene; snRNA; snoRNA; CD-box; 20 109 Small nucleolar RNA SNORD97
2306 SNORD98 RF00607 Gene; snRNA; snoRNA; CD-box; 10 90 Small nucleolar RNA SNORD98
2307 SNORD99 RF00608 Gene; snRNA; snoRNA; CD-box; 23 111 Small nucleolar RNA SNORD99
2308 snoRNA2 RF02785 Gene; snRNA; snoRNA; CD-box; 3 12 Trypanosomatid small nucleolar RNA 2
2309 SNORND104 RF00289 Gene; snRNA; snoRNA; CD-box; 18 68 Small nucleolar RNA SNORD104
2310 snosnR48 RF00471 Gene; snRNA; snoRNA; CD-box; 6 54 Small nucleolar RNA snR48
2311 snosnR54 RF00473 Gene; snRNA; snoRNA; CD-box; 8 65 Small nucleolar RNA snR54
2312 snosnR55 RF00472 Gene; snRNA; snoRNA; CD-box; 6 53 Small nucleolar RNA snR55/Z10
2313 snosnR57 RF00474 Gene; snRNA; snoRNA; CD-box; 5 59 Small nucleolar RNA snR57
2314 snosnR60_Z15 RF00309 Gene; snRNA; snoRNA; CD-box; 23 1,026 Small nucleolar RNA snR60/Z15/Z230/Z193/J17
2315 snosnR61 RF00476 Gene; snRNA; snoRNA; CD-box; 56 578 Small nucleolar RNA snR61/Z1/Z11
2316 snosnR64 RF00509 Gene; snRNA; snoRNA; CD-box; 10 42 Small nucleolar RNA snR64
2317 snosnR66 RF00477 Gene; snRNA; snoRNA; CD-box; 4 29 Small nucleolar RNA snR66
2318 snosnR69 RF00475 Gene; snRNA; snoRNA; CD-box; 6 73 Small nucleolar RNA snR69
2319 snosnR71 RF00479 Gene; snRNA; snoRNA; CD-box; 7 58 Small nucleolar RNA snR71
2320 snoTBR12 RF02789 Gene; snRNA; snoRNA; CD-box; 3 31 Small nucleolar RNA TBR12
2321 snoTBR17 RF00294 Gene; snRNA; snoRNA; CD-box; 6 69 Small nucleolar RNA TBR17
2322 snoTBR2 RF02786 Gene; snRNA; snoRNA; CD-box; 5 49 Small nucleolar RNA TBR2
2323 snoTBR4 RF02787 Gene; snRNA; snoRNA; CD-box; 3 24 Small nucleolar RNA TBR4
2324 snoTBR5 RF00292 Gene; snRNA; snoRNA; CD-box; 6 78 Small nucleolar RNA TBR5
2325 snoTBR6 RF02788 Gene; snRNA; snoRNA; CD-box; 3 52 Small nucleolar RNA TBR6
2326 snoTBR7 RF00295 Gene; snRNA; snoRNA; CD-box; 10 80 Small nucleolar RNA TBR7
2327 snoU105B RF01173 Gene; snRNA; snoRNA; CD-box; 13 34 Small nucleolar RNA U105B
2328 snoU109 RF01233 Gene; snRNA; snoRNA; HACA-box; 26 322 Small nucleolar RNA U109
2329 snoU13 RF01210 Gene; snRNA; snoRNA; CD-box; 34 5,445 Small nucleolar RNA U13
2330 snoU18 RF01159 Gene; snRNA; snoRNA; CD-box; 16 91 Small nucleolar RNA U18
2331 snoU19 RF01236 Gene; snRNA; snoRNA; HACA-box; 3 118 Small nucleolar RNA U19
2332 snoU2-30 RF00493 Gene; snRNA; snoRNA; CD-box; 21 130 Small nucleolar RNA U2-30
2333 snoU25 RF01298 Gene; snRNA; snoRNA; CD-box; 3 5 Small nucleolar RNA U25
2334 snoU2_19 RF00494 Gene; snRNA; snoRNA; CD-box; 29 223 Small nucleolar RNA U2-19
2335 snoU30 RF01283 Gene; snRNA; snoRNA; CD-box; 5 103 Small nucleolar RNA U30
2336 snoU31b RF01285 Gene; snRNA; snoRNA; CD-box; 7 446 Small nucleolar RNA U31b
2337 snoU36a RF01302 Gene; snRNA; snoRNA; CD-box; 15 355 SnoRNA U36a
2338 snoU43 RF01174 Gene; snRNA; snoRNA; CD-box; 11 51 Small nucleolar RNA U43
2339 snoU49 RF01300 Gene; snRNA; snoRNA; CD-box; 5 93 Small nucleolar RNA U49
2340 snoU54 RF01277 Gene; snRNA; snoRNA; CD-box; 28 127 Small nucleolar RNA U54
2341 snoU6-47 RF01221 Gene; snRNA; snoRNA; CD-box; 5 13 Small nucleolar RNA U6-47
2342 snoU6-53 RF00377 Gene; snRNA; snoRNA; CD-box; 25 168 Small nucleolar RNA U6-53/MBII-28
2343 snoU61 RF01170 Gene; snRNA; snoRNA; CD-box; 8 130 Small nucleolar RNA U61
2344 snoU82P RF01151 Gene; snRNA; snoRNA; CD-box; 14 42 Small nucleolar RNA U82P
2345 snoU83 RF01179 Gene; snRNA; snoRNA; CD-box; 7 104 Small nucleolar RNA U83
2346 snoU83B RF00593 Gene; snRNA; snoRNA; CD-box; 21 177 Small nucleolar RNA U83B
2347 snoU83D RF01175 Gene; snRNA; snoRNA; CD-box; 8 12 Small nucleolar RNA U83
2348 snoU85 RF01296 Gene; snRNA; snoRNA; HACA-box; 21 182 Small nucleolar RNA U85
2349 snoU89 RF01294 Gene; snRNA; snoRNA; HACA-box; 16 51 Small nucleolar RNA U89
2350 snoZ101 RF00358 Gene; snRNA; snoRNA; CD-box; 13 351 Small nucleolar RNA Z101
2351 snoZ102_R77 RF00359 Gene; snRNA; snoRNA; CD-box; 9 435 Small nucleolar RNA Z102/R77
2352 snoZ103 RF00149 Gene; snRNA; snoRNA; CD-box; 12 1,457 Small nucleolar RNA Z103
2353 snoZ105 RF00145 Gene; snRNA; snoRNA; CD-box; 11 236 Small nucleolar RNA Z105
2354 snoZ107_R87 RF00360 Gene; snRNA; snoRNA; CD-box; 9 258 Small nucleolar RNA Z107/R87
2355 snoZ112 RF00337 Gene; snRNA; snoRNA; CD-box; 6 187 Small nucleolar RNA Z112
2356 snoZ118 RF00142 Gene; snRNA; snoRNA; CD-box; 7 244 Small nucleolar RNA Z118/Z121/Z120
2357 snoZ119 RF00361 Gene; snRNA; snoRNA; CD-box; 6 62 Small nucleolar RNA Z119
2358 snoZ122 RF00343 Gene; snRNA; snoRNA; CD-box; 23 278 Small nucleolar RNA Z122
2359 snoZ13_snr52 RF00335 Gene; snRNA; snoRNA; CD-box; 42 545 Small nucleolar RNA Z13/snr52
2360 snoZ152 RF00350 Gene; snRNA; snoRNA; CD-box; 9 222 Small nucleolar RNA Z152/R70/R12/
2361 snoZ155 RF00326 Gene; snRNA; snoRNA; CD-box; 8 150 Small nucleolar RNA Z155
2362 snoZ157 RF00333 Gene; snRNA; snoRNA; CD-box; 10 295 Small nucleolar RNA Z157/R69/R10
2363 snoZ159 RF00160 Gene; snRNA; snoRNA; CD-box; 10 545 Small nucleolar RNA Z159/U59
2364 snoZ161_228 RF00328 Gene; snRNA; snoRNA; CD-box; 11 219 Small nucleolar RNA Z161/Z228
2365 snoZ162 RF00329 Gene; snRNA; snoRNA; CD-box; 9 60 Small nucleolar RNA Z162
2366 snoZ163 RF00317 Gene; snRNA; snoRNA; CD-box; 7 45 Small nucleolar RNA Z163/Z177 family
2367 snoZ165 RF00310 Gene; snRNA; snoRNA; CD-box; 5 14 Small nucleolar RNA Z165
2368 snoZ168 RF00159 Gene; snRNA; snoRNA; CD-box; 6 53 Small nucleolar RNA Z168/Z174
2369 snoZ169 RF00331 Gene; snRNA; snoRNA; CD-box; 3 14 Small nucleolar RNA Z169
2370 snoZ17 RF00266 Gene; snRNA; snoRNA; CD-box; 26 133 Small nucleolar RNA Z17
2371 snoZ173 RF00313 Gene; snRNA; snoRNA; CD-box; 4 17 Small nucleolar RNA Z173
2372 snoZ175 RF00318 Gene; snRNA; snoRNA; CD-box; 6 13 Small nucleolar RNA Z175
2373 snoZ178 RF00306 Gene; snRNA; snoRNA; CD-box; 5 8 Small nucleolar RNA Z178
2374 snoZ182 RF00314 Gene; snRNA; snoRNA; CD-box; 6 21 Small nucleolar RNA Z182
2375 snoZ185 RF00320 Gene; snRNA; snoRNA; CD-box; 5 26 Small nucleolar RNA Z185
2376 snoZ188 RF00311 Gene; snRNA; snoRNA; CD-box; 21 79 Small nucleolar RNA Z188
2377 snoZ194 RF00327 Gene; snRNA; snoRNA; CD-box; 5 27 Small nucleolar RNA Z194
2378 snoZ196 RF00134 Gene; snRNA; snoRNA; CD-box; 22 302 Small nucleolar RNA Z196/R39/R59 family
2379 snoZ199 RF00200 Gene; snRNA; snoRNA; CD-box; 17 406 Small nucleolar RNA Z199
2380 snoZ206 RF00312 Gene; snRNA; snoRNA; CD-box; 6 43 Small nucleolar RNA Z206
2381 snoZ221_snoR21b RF00300 Gene; snRNA; snoRNA; CD-box; 12 237 Small nucleolar RNA Z221/R21b
2382 snoZ223 RF00135 Gene; snRNA; snoRNA; CD-box; 5 389 Small nucleolar RNA Z223
2383 snoZ242 RF00441 Gene; snRNA; snoRNA; CD-box; 5 23 Small nucleolar RNA Z242
2384 snoZ247 RF00321 Gene; snRNA; snoRNA; CD-box; 8 2,804 Small nucleolar RNA Z247
2385 snoZ248 RF00305 Gene; snRNA; snoRNA; CD-box; 5 16 Small nucleolar RNA Z248
2386 snoZ256 RF00301 Gene; snRNA; snoRNA; CD-box; 5 62 Small nucleolar RNA Z256
2387 snoZ266 RF00332 Gene; snRNA; snoRNA; CD-box; 11 272 Small nucleolar RNA Z266
2388 snoZ267 RF00344 Gene; snRNA; snoRNA; CD-box; 5 176 Small nucleolar RNA Z267
2389 snoZ278 RF00201 Gene; snRNA; snoRNA; CD-box; 7 375 Small nucleolar RNA Z278
2390 snoZ279_R105_R108 RF00304 Gene; snRNA; snoRNA; CD-box; 20 276 Small nucleolar RNA Z279/snoR105/snoR108
2391 snoZ30 RF00288 Gene; snRNA; snoRNA; CD-box; 20 127 Z30 small nucleolar RNA
2392 snoZ30a RF01196 Gene; snRNA; snoRNA; CD-box; 10 11 Small nucleolar RNA Z30a
2393 snoZ39 RF00341 Gene; snRNA; snoRNA; CD-box; 5 159 Small nucleolar RNA Z39
2394 snoZ40 RF00342 Gene; snRNA; snoRNA; CD-box; 5 119 Small nucleolar RNA Z40
2395 snoZ43 RF00330 Gene; snRNA; snoRNA; CD-box; 7 322 Small nucleolar RNA Z43
2396 snoZ5 RF01226 Gene; snRNA; snoRNA; CD-box; 8 9 Small nucleolar RNA Z5
2397 snoZ6 RF00285 Gene; snRNA; snoRNA; CD-box; 7 52 Z6 small nucleolar RNA
2398 snoZ7 RF00268 Gene; snRNA; snoRNA; CD-box; 5 34 Small nucleolar RNA snoZ7/snoR77
2399 sno_ncR1 RF02715 Gene; snRNA; snoRNA; HACA-box; 5 10 Small nucleolar RNA ncR1
2400 sno_ncR3 RF02716 Gene; snRNA; snoRNA; CD-box; 5 5 Small nucleolar RNA ncR3
2401 sno_ncR4 RF02717 Gene; snRNA; snoRNA; CD-box; 3 3 Small nucleolar RNA ncR4
2402 sno_ZL1 RF02723 Gene; snRNA; snoRNA; CD-box; 5 69 Small nucleolar RNA ZL1
2403 sno_ZL116 RF02727 Gene; snRNA; snoRNA; CD-box; 5 9 Small nucleolar RNA ZL116
2404 sno_ZL2 RF02724 Gene; snRNA; snoRNA; CD-box; 6 36 Small nucleolar RNA ZL2
2405 sno_ZL63 RF02726 Gene; snRNA; snoRNA; CD-box; 3 8 Small nucleolar RNA ZL63
2406 sno_ZL8 RF02725 Gene; snRNA; snoRNA; CD-box; 6 31 Small nucleolar RNA ZL8
2407 snR10 RF01258 Gene; snRNA; snoRNA; HACA-box; 15 65 Small nucleolar RNA snR10
2408 snR11 RF01260 Gene; snRNA; snoRNA; HACA-box; 6 31 Small nucleolar RNA snR11
2409 snR13 RF01223 Gene; snRNA; snoRNA; CD-box; 2 53 Small nucleolar RNA snR13
2410 snR161 RF01237 Gene; snRNA; snoRNA; HACA-box; 10 30 Small nucleolar RNA snR161
2411 snR189 RF01250 Gene; snRNA; snoRNA; HACA-box; 4 26 Small nucleolar RNA snR189
2412 snR190 RF01249 Gene; snRNA; snoRNA; CD-box; 10 42 Small nucleolar RNA snR190
2413 snR191 RF01263 Gene; snRNA; snoRNA; HACA-box; 11 234 Small nucleolar RNA snR191
2414 snR3 RF01251 Gene; snRNA; snoRNA; HACA-box; 4 57 Small nucleolar RNA snR3
2415 snR30 RF01271 Gene; snRNA; snoRNA; HACA-box; 5 30 Small nucleolar RNA snR30
2416 snR31 RF01257 Gene; snRNA; snoRNA; HACA-box; 8 37 Small nucleolar RNA snR31
2417 snR32 RF01247 Gene; snRNA; snoRNA; HACA-box; 11 95 Small nucleolar RNA snR32
2418 snR33 RF01243 Gene; snRNA; snoRNA; HACA-box; 5 14 Small nucleolar RNA snR33
2419 snR34 RF01254 Gene; snRNA; snoRNA; HACA-box; 4 42 Small nucleolar RNA snR34
2420 snR35 RF01255 Gene; snRNA; snoRNA; HACA-box; 11 59 Small nucleolar RNA snR35
2421 snR36 RF01242 Gene; snRNA; snoRNA; HACA-box; 10 303 Small nucleolar RNA snR36
2422 snR37 RF01267 Gene; snRNA; snoRNA; HACA-box; 9 50 Small nucleolar RNA snR37
2423 snR39 RF01197 Gene; snRNA; snoRNA; CD-box; 4 43 Small nucleolar RNA snR39
2424 snR4 RF01244 Gene; snRNA; snoRNA; CD-box; 5 35 Small nucleolar RNA snR4
2425 snR40 RF01201 Gene; snRNA; snoRNA; CD-box; 18 58 Small nucleolar RNA snR40
2426 snR41 RF01218 Gene; snRNA; snoRNA; CD-box; 18 63 Small nucleolar RNA snR41
2427 snR42 RF01265 Gene; snRNA; snoRNA; HACA-box; 5 39 Small nucleolar RNA snR42
2428 snR43 RF01256 Gene; snRNA; snoRNA; HACA-box; 20 66 Small nucleolar RNA snR43
2429 snR44 RF01262 Gene; snRNA; snoRNA; HACA-box; 7 250 Small nucleolar RNA snR44
2430 snR45 RF01266 Gene; snRNA; snoRNA; CD-box; 8 31 Small nucleolar RNA snR45
2431 snR46 RF01253 Gene; snRNA; snoRNA; HACA-box; 6 55 Small nucleolar RNA snR46
2432 snR47 RF01203 Gene; snRNA; snoRNA; CD-box; 17 67 Small nucleolar RNA snR47
2433 snR49 RF01239 Gene; snRNA; snoRNA; HACA-box; 6 49 Small nucleolar RNA snR49
2434 snR5 RF01252 Gene; snRNA; snoRNA; HACA-box; 11 58 Small nucleolar RNA snR5
2435 snR50 RF01190 Gene; snRNA; snoRNA; CD-box; 3 11 Small nucleolar RNA snR50
2436 snR51 RF01214 Gene; snRNA; snoRNA; CD-box; 17 127 Small nucleolar RNA snR51
2437 snR52 RF01195 Gene; snRNA; snoRNA; CD-box; 5 33 Small nucleolar RNA snR52
2438 snR56 RF01188 Gene; snRNA; snoRNA; CD-box; 16 94 Small nucleolar RNA snR56
2439 snR58 RF01199 Gene; snRNA; snoRNA; CD-box; 3 9 Small nucleolar RNA snR58
2440 snR62 RF01205 Gene; snRNA; snoRNA; CD-box; 2 10 Small nucleolar RNA snR62
2441 snR63 RF01259 Gene; snRNA; snoRNA; CD-box; 6 29 Small nucleolar RNA snR63
2442 snR65 RF01204 Gene; snRNA; snoRNA; HACA-box; 5 30 Small nucleolar RNA snR65
2443 snR67 RF01177 Gene; snRNA; snoRNA; CD-box; 16 64 Small nucleolar RNA snR67
2444 snR68 RF01235 Gene; snRNA; snoRNA; CD-box; 5 9 Small nucleolar RNA snR68
2445 snR70 RF01238 Gene; snRNA; snoRNA; CD-box; 9 27 Small nucleolar RNA snR70
2446 snR73 RF01207 Gene; snRNA; snoRNA; CD-box; 5 244 Small nucleolar RNA snR73
2447 snR75 RF01185 Gene; snRNA; snoRNA; CD-box; 61 459 Small nucleolar RNA snR75
2448 snR76 RF01209 Gene; snRNA; snoRNA; CD-box; 15 69 Small nucleolar RNA snR76
2449 snR77 RF01181 Gene; snRNA; snoRNA; CD-box; 15 68 Small nucleolar RNA snR77
2450 snR78 RF01176 Gene; snRNA; snoRNA; CD-box; 8 37 Small nucleolar RNA snR78
2451 snR79 RF01184 Gene; snRNA; snoRNA; CD-box; 18 62 Small nucleolar RNA snR79
2452 snR8 RF01248 Gene; snRNA; snoRNA; HACA-box; 11 64 Small nucleolar RNA snR8
2453 snR80 RF01269 Gene; snRNA; snoRNA; HACA-box; 6 198 Small nucleolar RNA snR80
2454 snR81 RF01246 Gene; snRNA; snoRNA; HACA-box; 3 9 Small nucleolar RNA snR81
2455 snR82 RF01261 Gene; snRNA; snoRNA; HACA-box; 5 30 Small nucleolar RNA snR82
2456 snR83 RF01264 Gene; snRNA; snoRNA; HACA-box; 5 17 Small nucleolar RNA snR83
2457 snR84 RF01270 Gene; snRNA; snoRNA; HACA-box; 6 9 Small nucleolar RNA snR84
2458 snR85 RF01240 Gene; snRNA; snoRNA; HACA-box; 5 29 Small nucleolar RNA snR85
2459 snR86 RF01272 Gene; snRNA; snoRNA; HACA-box; 5 9 Small nucleolar RNA snR86
2460 snR87 RF01216 Gene; snRNA; snoRNA; CD-box; 4 40 Small nucleolar RNA snR87
2461 snR9 RF01245 Gene; snRNA; snoRNA; HACA-box; 5 11 Small nucleolar RNA snR9
2462 sobemo_FSE RF01838 Cis-reg; frameshift_element; 5 4 sobemovirus ribosomal frameshift elemental
2463 SodB_thermometer RF02775 Cis-reg; thermoregulator; 5 2 SodB 5' UTR thermometer
2464 SodC_thermometer RF02776 Cis-reg; thermoregulator; 2 1 SodC 5' UTR thermometer
2465 sodF_sRNA RF02790 Gene; sRNA; 6 169 sodF sRNA
2466 sok RF01794 Gene; antitoxin; 91 226 sok antitoxin (CssrC)
2467 SorX RF02784 Gene; sRNA; 8 271 Singlet oxygen resistance RNA X
2468 SorY RF02651 Gene; sRNA; 2 1 Singlet oxygen resistance RNA Y
2469 sot0042 RF02656 Gene; sRNA; 2 142 Sense overlapping transcript RNA 0042 (sot)
2470 sot2652 RF02657 Gene; sRNA; 2 25 Sense overlapping transcript RNA 2652 (sot)
2471 SOX2OT_exon1 RF01951 Gene; lncRNA; 29 100 SOX2 overlapping transcript exon 1
2472 SOX2OT_exon2 RF01952 Gene; lncRNA; 14 38 SOX2 overlapping transcript exon 2
2473 SOX2OT_exon3 RF01953 Gene; lncRNA; 11 85 SOX2 overlapping transcript exon 3
2474 SOX2OT_exon4 RF01954 Gene; lncRNA; 10 61 SOX2 overlapping transcript exon 4
2475 Spd-sr07 RF02418 Gene; sRNA; 3 3 Streptococcus sRNA Spd-sr07
2476 Spd-sr37 RF02419 Gene; sRNA; 25 44 Streptococcus sRNA Spd-sr37
2477 speF RF00518 Cis-reg; leader; 6 222 speF leader
2478 SpF01_sRNA RF02425 Gene; sRNA; 13 7 Streptococcus sRNA SpF01
2479 SpF03_sRNA RF02426 Gene; sRNA; 3 6 Streptococcus sRNA SpF03
2480 SpF10_sRNA RF02427 Gene; sRNA; 2 4 Streptococcus sRNA SpF10
2481 SpF11_sRNA RF02428 Gene; sRNA; 3 4 Streptococcus sRNA SpF11
2482 SpF14_sRNA RF02429 Gene; sRNA; 4 3 Streptococcus sRNA SpF14
2483 SpF19_sRNA RF02430 Gene; sRNA; 3 4 Streptococcus sRNA SpF19
2484 SpF22_sRNA RF02431 Gene; sRNA; 22 9 Streptococcus sRNA SpF22
2485 SpF25_sRNA RF02432 Gene; sRNA; 20 15 Streptococcus sRNA SpF25
2486 SpF36_sRNA RF02433 Gene; sRNA; 4 5 Streptococcus sRNA SpF36
2487 SpF39_sRNA RF02434 Gene; sRNA; 13 13 Streptococcus sRNA SpF39
2488 SpF41_sRNA RF02435 Gene; sRNA; 9 9 Streptococcus sRNA SpF41
2489 SpF43_sRNA RF02436 Gene; sRNA; 5 11 Streptococcus sRNA SpF43
2490 SpF44_sRNA RF02437 Gene; sRNA; 12 8 Streptococcus sRNA SpF44
2491 SpF51_sRNA RF02438 Gene; sRNA; 8 8 Streptococcus sRNA SpF51
2492