# Species tree for RF02012 # Generated from Rfam version 14.10 | +--unclassifiedsequences (72) | | | +--metagenome sequence (7) | | | +--metagenomes (65) | | | +--freshwater sediment metagenome (16) | | | +--mouse gut metagenome (2) | | | +--microbial mat metagenome (7) | | | +--human gut metagenome (34) | | | +--marine metagenome (6) | +--Eukaryota (81) | | | +--Metazoa (7) | | | | | +--Nematoda (1) | | | | | | | +--Chromadorea (1) | | | | | | | +--Oxyurida (1) | | | | | | | +--Oxyuroidea (1) | | | | | | | +--Oxyuridae (1) | | | | | | | +--Enterobius vermicularis (1) | | | | | +--Arthropoda (5) | | | | | | | +--Hexapoda (3) | | | | | | | | | +--Insecta (3) | | | | | | | | | +--Pterygota (3) | | | | | | | | | +--Neoptera (3) | | | | | | | | | +--Endopterygota (3) | | | | | | | | | +--Hymenoptera (2) | | | | | | | | | | | +--Apocrita (2) | | | | | | | | | | | +--Aculeata (2) | | | | | | | | | | | +--Vespoidea (2) | | | | | | | | | | | +--Formicidae (2) | | | | | | | | | | | +--Formicinae (1) | | | | | | | | | | | | | +--Lasius (1) | | | | | | | | | | | | | +--Lasius niger (1) | | | | | | | | | | | +--Myrmicinae (1) | | | | | | | | | | | +--Atta colombica (1) | | | | | | | | | +--Diptera (1) | | | | | | | | | +--Brachycera (1) | | | | | | | | | +--Muscomorpha (1) | | | | | | | | | +--Oestroidea (1) | | | | | | | | | +--Calliphoridae (1) | | | | | | | | | +--Luciliinae (1) | | | | | | | | | +--Lucilia cuprina (1) | | | | | | | +--Chelicerata (2) | | | | | | | +--Arachnida (2) | | | | | | | +--Acari (2) | | | | | | | +--Parasitiformes (2) | | | | | | | +--Ixodida (2) | | | | | | | +--Ixodoidea (2) | | | | | | | +--Ixodidae (2) | | | | | | | +--Ixodinae (2) | | | | | | | +--Ixodes scapularis (black-legged tick) (2) | | | | | +--Echinodermata (1) | | | | | +--Eleutherozoa (1) | | | | | +--Echinozoa (1) | | | | | +--Echinoidea (1) | | | | | +--Euechinoidea (1) | | | | | +--Echinacea (1) | | | | | +--Echinoida (1) | | | | | +--Strongylocentrotidae (1) | | | | | +--Strongylocentrotus purpuratus (1) | | | +--Fungi (38) | | | | | +--Dikarya (38) | | | | | +--Ascomycota (32) | | | | | | | +--Pezizomycotina (31) | | | | | | | | | +--Eurotiomycetes (18) | | | | | | | | | | | +--Eurotiomycetidae (18) | | | | | | | | | | | +--Onygenales (18) | | | | | | | | | | | +--mitosporicOnygenales (9) | | | | | | | | | | | | | +--Paracoccidioides brasiliensis Pb18 (1) | | | | | | | | | | | | | +--Coccidioides immitis RS (2) | | | | | | | | | | | | | +--Coccidioides immitis RMSCC 3703 (2) | | | | | | | | | | | | | +--Coccidioides immitis RMSCC 2394 (4) | | | | | | | | | | | +--Ajellomycetaceae (9) | | | | | | | | | | | +--Ajellomyces dermatitidis ER-3 (2) | | | | | | | | | | | +--Ajellomyces capsulatus H143 (1) | | | | | | | | | | | +--Ajellomyces capsulatus H88 (1) | | | | | | | | | | | +--Ajellomyces capsulatus NAm1 (2) | | | | | | | | | | | +--Ajellomyces dermatitidis SLH14081 (3) | | | | | | | | | +--Leotiomycetes (4) | | | | | | | | | | | +--Helotiales (1) | | | | | | | | | | | | | +--Sclerotiniaceae (1) | | | | | | | | | | | | | +--Sclerotinia sclerotiorum 1980 UF-70 (1) | | | | | | | | | | | +--Erysiphales (3) | | | | | | | | | | | +--Erysiphaceae (3) | | | | | | | | | | | +--Erysiphe necator (grape powdery mildew) (3) | | | | | | | | | +--Dothideomycetes (2) | | | | | | | | | | | +--Dothideomycetesincertaesedis (2) | | | | | | | | | | | +--Botryosphaeriales (2) | | | | | | | | | | | +--Botryosphaeriaceae (2) | | | | | | | | | | | +--mitosporicBotryosphaeriaceae (2) | | | | | | | | | | | +--Diplodia seriata (2) | | | | | | | | | +--Sordariomycetes (7) | | | | | | | | | +--Hypocreomycetidae (2) | | | | | | | | | | | +--Hypocreales (1) | | | | | | | | | | | | | +--Ophiocordycipitaceae (1) | | | | | | | | | | | | | +--Ophiocordyceps unilateralis (1) | | | | | | | | | | | +--Microascales (1) | | | | | | | | | | | +--Ceratocystidaceae (1) | | | | | | | | | | | +--Ceratocystis radicicola (1) | | | | | | | | | +--Sordariomycetidae (4) | | | | | | | | | | | +--Magnaporthales (3) | | | | | | | | | | | | | +--Magnaporthaceae (3) | | | | | | | | | | | | | +--Magnaporthe poae ATCC 64411 (2) | | | | | | | | | | | | | +--Gaeumannomyces graminis var. tritici R3-111a-1 (1) | | | | | | | | | | | +--Diaporthales (1) | | | | | | | | | | | +--Diaporthaceae (1) | | | | | | | | | | | +--Diaporthe helianthi (1) | | | | | | | | | +--Xylariomycetidae (1) | | | | | | | | | +--Xylariales (1) | | | | | | | | | +--Xylariaceae (1) | | | | | | | | | +--Rosellinia necatrix (1) | | | | | | | +--Saccharomycotina (1) | | | | | | | +--Saccharomycetes (1) | | | | | | | +--Saccharomycetales (1) | | | | | | | +--Saccharomycetaceae (1) | | | | | | | +--Saccharomyces cerevisiae S288c (1) | | | | | +--Basidiomycota (6) | | | | | +--Ustilaginomycotina (1) | | | | | | | +--Ustilaginomycetes (1) | | | | | | | +--Ustilaginales (1) | | | | | | | +--Ustilaginaceae (1) | | | | | | | +--Sporisorium reilianum SRZ2 (1) | | | | | +--Pucciniomycotina (2) | | | | | | | +--Microbotryomycetes (2) | | | | | | | +--Microbotryales (2) | | | | | | | +--Microbotryaceae (2) | | | | | | | +--Microbotryum violaceum p1A1 Lamole (2) | | | | | +--Agaricomycotina (3) | | | | | +--Agaricomycetes (3) | | | | | +--Agaricomycetidae (3) | | | | | +--Agaricales (3) | | | | | +--Schizophyllaceae (2) | | | | | | | +--Grifola frondosa (2) | | | | | +--Marasmiaceae (1) | | | | | +--Lentinula edodes (shiitake mushroom) (1) | | | +--Viridiplantae (11) | | | | | +--Streptophyta (8) | | | | | | | +--Embryophyta (5) | | | | | | | | | +--Tracheophyta (5) | | | | | | | | | +--Spermatophyta (5) | | | | | | | | | +--Magnoliophyta (5) | | | | | | | | | +--Liliopsida (2) | | | | | | | | | | | +--Poales (2) | | | | | | | | | | | +--Poaceae (2) | | | | | | | | | | | +--BEPclade (2) | | | | | | | | | | | +--Pooideae (2) | | | | | | | | | | | +--Triticeae (2) | | | | | | | | | | | +--Hordeum vulgare subsp. vulgare (domesticated barley) (1) | | | | | | | | | | | +--Triticum urartu (1) | | | | | | | | | +--eudicotyledons (3) | | | | | | | | | +--coreeudicotyledons (3) | | | | | | | | | +--rosids (2) | | | | | | | | | | | +--fabids (2) | | | | | | | | | | | +--Malpighiales (2) | | | | | | | | | | | +--Euphorbiaceae (2) | | | | | | | | | | | +--Acalyphoideae (2) | | | | | | | | | | | +--Acalypheae (2) | | | | | | | | | | | +--Ricinus communis (castor bean) (2) | | | | | | | | | +--asterids (1) | | | | | | | | | +--lamiids (1) | | | | | | | | | +--Solanales (1) | | | | | | | | | +--Solanaceae (1) | | | | | | | | | +--Solanoideae (1) | | | | | | | | | +--Solaneae (1) | | | | | | | | | +--Solanum (1) | | | | | | | | | +--Solanum lycopersicum (1) | | | | | | | +--Streptophytina (3) | | | | | | | +--Embryophyta (3) | | | | | | | +--Marchantiophyta (3) | | | | | | | +--Marchantiopsida (3) | | | | | | | +--Marchantiidae (3) | | | | | | | +--Marchantiales (3) | | | | | | | +--Marchantiaceae (3) | | | | | | | +--Marchantia (3) | | | | | | | +--Marchantia polymorpha subsp. ruderalis (3) | | | | | +--Chlorophyta (3) | | | | | +--Chlorophyceae (3) | | | | | +--Sphaeropleales (3) | | | | | +--Selenastraceae (3) | | | | | +--Monoraphidium neglectum (3) | | | +--Opisthokonta (25) | | | +--Fungi (25) | | | +--Mucoromycota (3) | | | | | +--Glomeromycotina (3) | | | | | +--Glomeromycetes (3) | | | | | +--Glomerales (3) | | | | | +--Glomeraceae (3) | | | | | +--Rhizophagus (3) | | | | | +--Rhizophagus irregularis DAOM 181602 (2) | | | | | +--Rhizophagus irregularis DAOM 197198w (1) | | | +--Microsporidia (1) | | | | | +--Apansporoblastina (1) | | | | | +--Nosematidae (1) | | | | | +--Nosema (1) | | | | | +--Nosema bombycis CQ1 (1) | | | +--Dikarya (21) | | | +--Ascomycota (17) | | | | | +--saccharomyceta (17) | | | | | +--Pezizomycotina (15) | | | | | | | +--Pezizomycetes (2) | | | | | | | | | +--Pezizales (2) | | | | | | | | | +--Tuberaceae (2) | | | | | | | | | +--Tuber (2) | | | | | | | | | +--Tuber melanosporum Mel28 (2) | | | | | | | +--Orbiliomycetes (2) | | | | | | | | | +--Orbiliales (2) | | | | | | | | | +--Orbiliaceae (2) | | | | | | | | | +--Drechslerella (2) | | | | | | | | | +--Drechslerella stenobrocha 248 (2) | | | | | | | +--leotiomyceta (11) | | | | | | | +--sordariomyceta (9) | | | | | | | | | +--Sordariomycetes (9) | | | | | | | | | +--Hypocreomycetidae (6) | | | | | | | | | | | +--Hypocreales (6) | | | | | | | | | | | +--Cordycipitaceae (1) | | | | | | | | | | | | | +--Cordyceps (1) | | | | | | | | | | | | | +--Cordyceps confragosa RCEF 1005 (1) | | | | | | | | | | | +--Ophiocordycipitaceae (4) | | | | | | | | | | | | | +--Ophiocordyceps (4) | | | | | | | | | | | | | +--Ophiocordyceps sinensis CO18 (4) | | | | | | | | | | | +--Clavicipitaceae (1) | | | | | | | | | | | +--Metarhizium (1) | | | | | | | | | | | +--Metarhizium album ARSEF 1941 (1) | | | | | | | | | +--Sordariomycetidae (2) | | | | | | | | | | | +--Diaporthales (2) | | | | | | | | | | | +--Diaporthaceae (2) | | | | | | | | | | | +--Diaporthe ampelina (2) | | | | | | | | | +--Xylariomycetidae (1) | | | | | | | | | +--Xylariales (1) | | | | | | | | | +--Diatrypaceae (1) | | | | | | | | | +--Eutypa (1) | | | | | | | | | +--Eutypa lata UCREL1 (1) | | | | | | | +--dothideomyceta (2) | | | | | | | +--Dothideomycetes (2) | | | | | | | +--Dothideomycetesincertaesedis (2) | | | | | | | +--Botryosphaeriales (2) | | | | | | | +--Botryosphaeriaceae (2) | | | | | | | +--Macrophomina (1) | | | | | | | | | +--Macrophomina phaseolina MS6 (1) | | | | | | | +--Neofusicoccum (1) | | | | | | | +--Neofusicoccum parvum UCRNP2 (1) | | | | | +--Saccharomycotina (2) | | | | | +--Saccharomycetes (2) | | | | | +--Saccharomycetales (2) | | | | | +--Ascoideaceae (1) | | | | | | | +--Ascoidea (1) | | | | | | | +--Ascoidea rubescens DSM 1968 (1) | | | | | +--Saccharomycetaceae (1) | | | | | +--Pachysolen (1) | | | | | +--Pachysolen tannophilus NRRL Y-2460 (1) | | | +--Basidiomycota (4) | | | +--Agaricomycotina (4) | | | +--Agaricomycetes (4) | | | +--Agaricomycetesincertaesedis (2) | | | | | +--Cantharellales (2) | | | | | +--Ceratobasidiaceae (2) | | | | | +--Rhizoctonia (2) | | | | | +--Rhizoctonia solani AG-1 IB (1) | | | | | +--Rhizoctoniasolani (1) | | | | | +--Rhizoctonia solani 123E (1) | | | +--Agaricomycetidae (2) | | | +--Atheliales (1) | | | | | +--Atheliaceae (1) | | | | | +--Piloderma (1) | | | | | +--Piloderma croceum F 1598 (1) | | | +--Agaricales (1) | | | +--Lyophyllaceae (1) | | | +--Termitomyces sp. J132 (1) | +--Bacteria (919) | | | +--Bacteroidetes (57) | | | | | +--Sphingobacteriia (1) | | | | | | | +--Sphingobacteriales (1) | | | | | | | +--Saprospiraceae (1) | | | | | | | +--Haliscomenobacter hydrossis DSM 1100 (1) | | | | | +--Bacteroidia (48) | | | | | | | +--Bacteroidales (45) | | | | | | | | | +--Rikenellaceae (3) | | | | | | | | | | | +--Alistipes shahii WAL 8301 (3) | | | | | | | | | +--Porphyromonadaceae (1) | | | | | | | | | | | +--Proteiniphilum acetatigenes (1) | | | | | | | | | +--Bacteroidaceae (41) | | | | | | | | | +--Bacteroides sp. 9_1_42FAA (2) | | | | | | | | | +--Bacteroides dorei DSM 17855 (1) | | | | | | | | | +--Bacteroides fragilis NCTC 9343 (2) | | | | | | | | | +--Bacteroides plebeius DSM 17135 (2) | | | | | | | | | +--Bacteroides sp. 2_2_4 (1) | | | | | | | | | +--Bacteroides vulgatus ATCC 8482 (6) | | | | | | | | | +--Bacteroides thetaiotaomicron VPI-5482 (2) | | | | | | | | | +--Bacteroides coprophilus DSM 18228 (2) | | | | | | | | | +--Bacteroides fragilis 638R (1) | | | | | | | | | +--Bacteroides fragilis (4) | | | | | | | | | +--Bacteroides uniformis ATCC 8492 (1) | | | | | | | | | +--Bacteroides sp. 2_1_7 (1) | | | | | | | | | +--Bacteroides fluxus YIT 12057 (3) | | | | | | | | | +--Bacteroides intestinalis DSM 17393 (2) | | | | | | | | | +--Bacteroides dorei 5_1_36/D4 (2) | | | | | | | | | +--Bacteroides sp. 1_1_6 (2) | | | | | | | | | +--Bacteroides stercoris ATCC 43183 (2) | | | | | | | | | +--Bacteroides fragilis YCH46 (1) | | | | | | | | | +--Bacteroides xylanisolvens XB1A (1) | | | | | | | | | +--Bacteroides sp. D1 (1) | | | | | | | | | +--Bacteroides ovatus ATCC 8483 (2) | | | | | | | +--Bacteroidales bacterium SC/BZ-SP2 (3) | | | | | +--Cytophagia (8) | | | | | +--Cytophagales (8) | | | | | +--Cytophagaceae (1) | | | | | | | +--Dyadobacter sp. BZ26 (1) | | | | | +--Cyclobacteriaceae (7) | | | | | +--Cyclobacterium lianum (7) | | | +--uncultured bacterium (1) | | | +--Calditrichaeota (1) | | | | | +--Calditrichae (1) | | | | | +--Calditrichales (1) | | | | | +--Calditrichaceae (1) | | | | | +--Caldithrix (1) | | | | | +--Caldithrix abyssi DSM 13497 (1) | | | +--Chlamydiae (1) | | | | | +--Chlamydiales (1) | | | | | +--Simkaniaceae (1) | | | | | +--Simkania negevensis Z (1) | | | +--Cyanobacteria (48) | | | | | +--Nostocales (6) | | | | | | | +--Nostocaceae (6) | | | | | | | +--Cylindrospermum stagnale PCC 7417 (3) | | | | | | | +--Anabaena cylindrica PCC 7122 (3) | | | | | +--Chroococcales (42) | | | | | +--Synechococcus sp. PCC 7335 (2) | | | | | +--Thermosynechococcus elongatus BP-1 (40) | | | +--Acidobacteria (9) | | | | | +--unclassifiedAcidobacteria (5) | | | | | | | +--Acidobacteria bacterium 13_2_20CM_58_27 (2) | | | | | | | +--Acidobacteria bacterium 13_2_20CM_56_17 (2) | | | | | | | +--Acidobacteria bacterium 13_1_20CM_4_56_7 (1) | | | | | +--Acidobacteriia (1) | | | | | | | +--Acidobacteriales (1) | | | | | | | +--Acidobacteriaceae (1) | | | | | | | +--Granulicella (1) | | | | | | | +--Granulicella tundricola MP5ACTX9 (1) | | | | | +--Acidobacteriales (3) | | | | | +--Acidobacteriaceae (3) | | | | | +--Granulicella rosea (1) | | | | | +--Terriglobus saanensis SP1PR4 (2) | | | +--Fusobacteria (3) | | | | | +--Fusobacteriales (3) | | | | | +--Fusobacteriaceae (3) | | | | | +--Fusobacterium gonidiaformans ATCC 25563 (1) | | | | | +--Streptobacillus moniliformis DSM 12112 (2) | | | +--PVCgroup (4) | | | | | +--Planctomycetes (1) | | | | | | | +--Planctomycetes bacterium GWF2_42_9 (1) | | | | | +--Lentisphaerae (1) | | | | | | | +--unclassifiedLentisphaerae (1) | | | | | | | +--Lentisphaerae bacterium GWF2_57_35 (1) | | | | | +--Verrucomicrobia (2) | | | | | +--Opitutae (2) | | | | | +--Opitutales (2) | | | | | +--Opitutaceae (2) | | | | | +--Opitutaceae bacterium TSB47 (1) | | | | | +--Opitutaceae bacterium BACL24 MAG-120322-bin51 (1) | | | +--Nitrospirae (8) | | | | | +--Nitrospirales (3) | | | | | | | +--Nitrospiraceae (3) | | | | | | | +--Leptospirillum ferrodiazotrophum (1) | | | | | | | +--Leptospirillum rubarum (2) | | | | | +--Nitrospira (5) | | | | | +--Nitrospirales (5) | | | | | +--Nitrospiraceae (5) | | | | | +--Leptospirillum (5) | | | | | +--Leptospirillum sp. Group IV 'UBA BS' (3) | | | | | +--Leptospirillumsp.GroupI (2) | | | | | +--Leptospirillum ferrooxidans C2-3 (2) | | | +--Actinobacteria (24) | | | | | +--Actinobacteridae (24) | | | | | +--Actinomycetales (24) | | | | | +--Streptomycineae (16) | | | | | | | +--Streptomycetaceae (16) | | | | | | | +--Streptomyces rubellomurinus (1) | | | | | | | +--Streptomyces agglomeratus (2) | | | | | | | +--Streptomyces glaucescens (1) | | | | | | | +--Kitasatospora setae KM-6054 (1) | | | | | | | +--Streptomyces sp. RV15 (2) | | | | | | | +--Streptomyces aureofaciens (2) | | | | | | | +--Streptomyces bingchenggensis BCW-1 (2) | | | | | | | +--Streptomyces hygroscopicus subsp. decoyicus (1) | | | | | | | +--Streptomyces ambofaciens ATCC 23877 (1) | | | | | | | +--Streptomyces zinciresistens K42 (1) | | | | | | | +--Streptomyces cellostaticus (1) | | | | | | | +--Streptomyces griseofuscus (1) | | | | | +--Micrococcineae (1) | | | | | | | +--Intrasporangiaceae (1) | | | | | | | +--Intrasporangium sp. Q5-1 (1) | | | | | +--Micromonosporineae (6) | | | | | | | +--Micromonosporaceae (6) | | | | | | | +--Micromonospora sp. 211018 (1) | | | | | | | +--Micromonospora sp. CR30 (1) | | | | | | | +--Actinoplanes awajinensis subsp. mycoplanecinus (1) | | | | | | | +--Micromonospora narathiwatensis (2) | | | | | | | +--Actinoplanes derwentensis (1) | | | | | +--Frankineae (1) | | | | | +--Frankiaceae (1) | | | | | +--Frankia symbiont of Datisca glomerata (1) | | | +--Proteobacteria (544) | | | | | +--delta proteobacterium MLMS-1 (2) | | | | | +--Alphaproteobacteria (81) | | | | | | | +--Rhizobiales (11) | | | | | | | | | +--Rhizobiaceae (7) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (7) | | | | | | | | | | | +--Rhizobium (3) | | | | | | | | | | | | | +--Rhizobium freirei PRF 81 (3) | | | | | | | | | | | +--Rhizobium tibeticum (1) | | | | | | | | | | | +--Rhizobium lusitanum (2) | | | | | | | | | | | +--Agrobacterium rhizogenes (1) | | | | | | | | | +--Methylobacteriaceae (1) | | | | | | | | | | | +--Microvirga vignae (1) | | | | | | | | | +--Phyllobacteriaceae (3) | | | | | | | | | +--Mesorhizobium amorphae CCNWGS0123 (1) | | | | | | | | | +--Mesorhizobium loti MAFF303099 (2) | | | | | | | +--Rickettsiales (66) | | | | | | | | | +--endosymbiont of Acanthamoeba sp. UWC9 (3) | | | | | | | | | +--Rickettsiaceae (29) | | | | | | | | | | | +--Rickettsieae (29) | | | | | | | | | | | +--Orientia tsutsugamushi str. Ikeda (2) | | | | | | | | | | | +--Orientia (8) | | | | | | | | | | | | | +--Orientia tsutsugamushi str. Gilliam (6) | | | | | | | | | | | | | +--Orientia tsutsugamushi str. Sido (2) | | | | | | | | | | | +--Orientia tsutsugamushi str. Boryong (9) | | | | | | | | | | | +--Orientia tsutsugamushi UT76 (10) | | | | | | | | | +--Candidatus Midichloria mitochondrii IricVA (1) | | | | | | | | | +--Anaplasmataceae (33) | | | | | | | | | +--Wolbachieae (33) | | | | | | | | | +--Wolbachia endosymbiont of Drosophila melanogaster (2) | | | | | | | | | +--Wolbachia endosymbiont of Culex quinquefasciatus Pel (1) | | | | | | | | | +--Wolbachia sp. wRi (2) | | | | | | | | | +--Wolbachia (6) | | | | | | | | | | | +--Wolbachia endosymbiont of Drosophila simulans wNo (6) | | | | | | | | | +--Wolbachia endosymbiont of Muscidifurax uniraptor (1) | | | | | | | | | +--Wolbachia endosymbiont of Glossina morsitans morsitans (1) | | | | | | | | | +--Wolbachia endosymbiont of Drosophila simulans (3) | | | | | | | | | +--Wolbachia endosymbiont of Drosophila ananassae (17) | | | | | | | +--Holosporales (1) | | | | | | | | | +--Caedibacter sp. 38-128 (1) | | | | | | | +--Sphingomonadales (2) | | | | | | | | | +--Sphingomonadaceae (2) | | | | | | | | | +--Novosphingobium sp. AP12 (1) | | | | | | | | | +--Sphingomonas (1) | | | | | | | | | +--Sphingomonas sanxanigenens DSM 19645 = NX02 (1) | | | | | | | +--unclassifiedAlphaproteobacteria (1) | | | | | | | +--Alphaproteobacteria bacterium 41-28 (1) | | | | | +--Oligoflexia (1) | | | | | | | +--Bdellovibrionales (1) | | | | | | | +--Bdellovibrionales bacterium RIFOXYC1_FULL_37_79 (1) | | | | | +--Deltaproteobacteria (9) | | | | | | | +--Desulfuromonadales (5) | | | | | | | | | +--Geobacteraceae (5) | | | | | | | | | +--Geobacter uraniireducens Rf4 (2) | | | | | | | | | +--Geoalkalibacter subterraneus (1) | | | | | | | | | +--Geobacter sp. M18 (2) | | | | | | | +--Desulfobacterales (4) | | | | | | | +--Desulfobacteraceae (4) | | | | | | | +--Desulfobacula toluolica Tol2 (2) | | | | | | | +--Desulfobacterium autotrophicum HRM2 (2) | | | | | +--gamma proteobacterium HdN1 (2) | | | | | +--delta/epsilonsubdivisions (53) | | | | | | | +--Deltaproteobacteria (53) | | | | | | | +--Desulfuromonadales (3) | | | | | | | | | +--Desulfuromonadales bacterium GWD2_54_10 (1) | | | | | | | | | +--Geobacteraceae (2) | | | | | | | | | +--Geobacteraceae bacterium GWC2_58_44 (1) | | | | | | | | | +--Geobacteraceae bacterium GWC2_53_11 (1) | | | | | | | +--Desulfobacterales (46) | | | | | | | | | +--Desulfobacterales bacterium PC51MH44 (1) | | | | | | | | | +--Desulfobacteraceae (45) | | | | | | | | | +--Desulfotignum (1) | | | | | | | | | | | +--Desulfotignum phosphitoxidans DSM 13687 (1) | | | | | | | | | +--Candidatus Magnetomorum sp. HK-1 (14) | | | | | | | | | +--Desulfamplus magnetovallimortis (8) | | | | | | | | | +--CandidatusMagnetoglobus (20) | | | | | | | | | | | +--Candidatus Magnetoglobus multicellularis str. Araruama (20) | | | | | | | | | +--Desulfobacteraceae bacterium 4572_88 (2) | | | | | | | +--Syntrophobacterales (1) | | | | | | | | | +--Syntrophaceae (1) | | | | | | | | | +--Syntrophaceae bacterium CG2_30_49_12 (1) | | | | | | | +--unclassifiedDeltaproteobacteria (3) | | | | | | | +--delta proteobacterium ML8_D (3) | | | | | +--Gammaproteobacteria (227) | | | | | | | +--unclassifiedGammaproteobacteria (4) | | | | | | | | | +--Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_13 (1) | | | | | | | | | +--Competibacteraceae (3) | | | | | | | | | +--CandidatusContendobacter (3) | | | | | | | | | +--Candidatus Contendobacter odensis Run_B_J11 (3) | | | | | | | +--Enterobacterales (6) | | | | | | | | | +--Yersiniaceae (1) | | | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | +--Enterobacteriaceae (3) | | | | | | | | | | | +--Salmonella (1) | | | | | | | | | | | | | +--Salmonellaenterica (1) | | | | | | | | | | | | | +--Salmonellaentericasubsp.enterica (1) | | | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 (1) | | | | | | | | | | | +--Klebsiella (2) | | | | | | | | | | | +--Klebsiella pneumoniae IS43 (1) | | | | | | | | | | | +--Klebsiella pneumoniae IS46 (1) | | | | | | | | | +--Morganellaceae (1) | | | | | | | | | | | +--Xenorhabdus (1) | | | | | | | | | | | +--Xenorhabdus szentirmaii DSM 16338 (1) | | | | | | | | | +--Budviciaceae (1) | | | | | | | | | +--Leminorella (1) | | | | | | | | | +--Leminorella grimontii ATCC 33999 = DSM 5078 (1) | | | | | | | +--Reinekea blandensis MED297 (2) | | | | | | | +--Pasteurellales (6) | | | | | | | | | +--Pasteurellaceae (6) | | | | | | | | | +--Actinobacillus muris (1) | | | | | | | | | +--Mannheimia haemolytica PHL213 (1) | | | | | | | | | +--Haemophilus somnus 2336 (2) | | | | | | | | | +--unclassifiedPasteurellaceae (1) | | | | | | | | | | | +--Pasteurellaceae bacterium NI1060 (1) | | | | | | | | | +--Mannheimia (1) | | | | | | | | | +--Mannheimia haemolytica M42548 (1) | | | | | | | +--Nevskiales (1) | | | | | | | | | +--Sinobacteraceae (1) | | | | | | | | | +--Hydrocarboniphaga (1) | | | | | | | | | +--Hydrocarboniphaga effusa AP103 (1) | | | | | | | +--Methylococcales (2) | | | | | | | | | +--Methylococcaceae (2) | | | | | | | | | +--Methylomonas denitrificans (1) | | | | | | | | | +--Methyloprofundus sedimenti (1) | | | | | | | +--Alteromonadales (24) | | | | | | | | | +--Pseudoalteromonadaceae (1) | | | | | | | | | | | +--Pseudoalteromonas amylolytica (1) | | | | | | | | | +--Shewanellaceae (20) | | | | | | | | | | | +--Shewanella sediminis HAW-EB3 (2) | | | | | | | | | | | +--Shewanella baltica OS155 (1) | | | | | | | | | | | +--Shewanella putrefaciens 200 (1) | | | | | | | | | | | +--Shewanella frigidimarina NCIMB 400 (2) | | | | | | | | | | | +--Shewanella pealeana ATCC 700345 (4) | | | | | | | | | | | +--Shewanella putrefaciens CN-32 (2) | | | | | | | | | | | +--Shewanella sp. MR-4 (1) | | | | | | | | | | | +--Shewanella baltica OS195 (2) | | | | | | | | | | | +--Shewanella sp. MR-7 (1) | | | | | | | | | | | +--Shewanella benthica KT99 (3) | | | | | | | | | | | +--Shewanella piezotolerans WP3 (1) | | | | | | | | | +--Alteromonadaceae (3) | | | | | | | | | +--Paraglaciecola (2) | | | | | | | | | | | +--Paraglaciecola psychrophila 170 (2) | | | | | | | | | +--Marinobacter sp. T13-3 (1) | | | | | | | +--Legionellales (20) | | | | | | | | | +--Legionellaceae (20) | | | | | | | | | +--Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (4) | | | | | | | | | +--Legionella feeleii (1) | | | | | | | | | +--Legionella drancourtii LLAP12 (4) | | | | | | | | | +--Legionella sp. LegA (3) | | | | | | | | | +--Legionella nautarum (1) | | | | | | | | | +--Legionella israelensis (1) | | | | | | | | | +--Legionella (1) | | | | | | | | | | | +--Legionella oakridgensis ATCC 33761 = DSM 21215 (1) | | | | | | | | | +--Legionella rubrilucens (1) | | | | | | | | | +--Legionella tucsonensis (1) | | | | | | | | | +--Legionella longbeachae NSW150 (1) | | | | | | | | | +--Legionella norrlandica (2) | | | | | | | +--Vibrionales (60) | | | | | | | | | +--Vibrionaceae (57) | | | | | | | | | | | +--Vibrio mytili (3) | | | | | | | | | | | +--Vibrio sp. C7 (2) | | | | | | | | | | | +--Vibrio cidicii (2) | | | | | | | | | | | +--Vibrio alginolyticus 12G01 (1) | | | | | | | | | | | +--Vibrio sp. EJY3 (1) | | | | | | | | | | | +--Vibrio metschnikovii CIP 69.14 (3) | | | | | | | | | | | +--Photobacterium profundum SS9 (1) | | | | | | | | | | | +--Photobacterium sp. Gung47 (2) | | | | | | | | | | | +--Enterovibrio (10) | | | | | | | | | | | | | +--Enterovibrio nigricans DSM 22720 (10) | | | | | | | | | | | +--Vibrio coralliilyticus (1) | | | | | | | | | | | +--Vibrio panuliri (1) | | | | | | | | | | | +--Photobacterium proteolyticum (1) | | | | | | | | | | | +--Photobacterium ganghwense (2) | | | | | | | | | | | +--Vibrio cholerae TM 11079-80 (1) | | | | | | | | | | | +--Vibrio hepatarius (1) | | | | | | | | | | | +--Vibrio harveyi ATCC BAA-1116 (17) | | | | | | | | | | | +--Photobacterium marinum (2) | | | | | | | | | | | +--Photobacterium profundum (1) | | | | | | | | | | | +--Photobacterium angustum S14 (2) | | | | | | | | | | | +--Vibrio (3) | | | | | | | | | | | +--Vibrioharveyigroup (2) | | | | | | | | | | | | | +--Vibrio azureus NBRC 104587 (2) | | | | | | | | | | | +--Vibrio ezurae NBRC 102218 (1) | | | | | | | | | +--Vibrionales bacterium SWAT-3 (3) | | | | | | | +--Xanthomonadales (8) | | | | | | | | | +--Xanthomonadales bacterium 63-13 (1) | | | | | | | | | +--Rhodanobacteraceae (2) | | | | | | | | | | | +--Rhodanobacter sp. 115 (1) | | | | | | | | | | | +--Rhodanobacter sp. SCN 69-32 (1) | | | | | | | | | +--Xanthomonadaceae (5) | | | | | | | | | +--Stenotrophomonas (1) | | | | | | | | | | | +--Stenotrophomonas maltophilia (1) | | | | | | | | | +--Arenimonas (2) | | | | | | | | | | | +--Arenimonas malthae CC-JY-1 (1) | | | | | | | | | | | +--Arenimonas metalli CF5-1 (1) | | | | | | | | | +--Xylella fastidiosa 9a5c (2) | | | | | | | +--Chromatiales (9) | | | | | | | | | +--Ectothiorhodospiraceae (4) | | | | | | | | | | | +--Nitrococcus mobilis Nb-231 (2) | | | | | | | | | | | +--Thioalkalivibrio (2) | | | | | | | | | | | +--Thioalkalivibrio nitratireducens DSM 14787 (2) | | | | | | | | | +--Chromatiaceae (5) | | | | | | | | | +--Thiorhodovibrio sp. 970 (1) | | | | | | | | | +--Thiocapsa sp. KS1 (1) | | | | | | | | | +--Rheinheimera sp. E407-8 (1) | | | | | | | | | +--Thiohalocapsa (1) | | | | | | | | | | | +--uncultured Thiohalocapsa sp. PB-PSB1 (1) | | | | | | | | | +--Nitrosococcus halophilus Nc4 (1) | | | | | | | +--Enterobacteriales (23) | | | | | | | | | +--Enterobacteriaceae (23) | | | | | | | | | +--Pantoea sp. At-9b (1) | | | | | | | | | +--Escherichia coli (3) | | | | | | | | | +--Raoultella planticola (1) | | | | | | | | | +--Escherichia coli 53638 (1) | | | | | | | | | +--Escherichia coli B7A (1) | | | | | | | | | +--Kluyvera intermedia (1) | | | | | | | | | +--Citrobacter rodentium ICC168 (2) | | | | | | | | | +--Serratia (1) | | | | | | | | | | | +--Serratia symbiotica str. Tucson (1) | | | | | | | | | +--Klebsiella pneumoniae (1) | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (2) | | | | | | | | | +--Pantoea wallisii (1) | | | | | | | | | +--Xenorhabdus bovienii SS-2004 (1) | | | | | | | | | +--Xenorhabdus beddingii (1) | | | | | | | | | +--aphidsecondarysymbionts (6) | | | | | | | | | +--Candidatus Regiella insecticola R5.15 (2) | | | | | | | | | +--Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) (2) | | | | | | | | | +--Candidatus Regiella insecticola LSR1 (2) | | | | | | | +--Oceanospirillales (11) | | | | | | | | | +--Hahellaceae (2) | | | | | | | | | | | +--Hahella chejuensis KCTC 2396 (2) | | | | | | | | | +--Halomonadaceae (1) | | | | | | | | | | | +--Halomonas sp. S2151 (1) | | | | | | | | | +--Oceanospirillaceae (6) | | | | | | | | | | | +--Nitrincola nitratireducens (2) | | | | | | | | | | | +--Marinobacterium sp. AK27 (1) | | | | | | | | | | | +--Osedax symbiont Rs1 (3) | | | | | | | | | +--Alcanivoracaceae (2) | | | | | | | | | +--Alcanivorax borkumensis SK2 (2) | | | | | | | +--Pseudomonadales (51) | | | | | | | +--unclassifiedPseudomonadales (3) | | | | | | | | | +--Pseudomonadales bacterium GWC1_66_9 (1) | | | | | | | | | +--Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210 (2) | | | | | | | +--Pseudomonadaceae (42) | | | | | | | | | +--Pseudomonas sp. HUK17 (1) | | | | | | | | | +--Pseudomonas sp. Chol1 (1) | | | | | | | | | +--Pseudomonas putida W619 (1) | | | | | | | | | +--Pseudomonas alkylphenolia (4) | | | | | | | | | +--Pseudomonas fluorescens HK44 (4) | | | | | | | | | +--Azotobacter vinelandii (1) | | | | | | | | | +--Azotobacter vinelandii DJ (3) | | | | | | | | | +--Pseudomonas sp. VI4.1 (1) | | | | | | | | | +--Pseudomonas sp. 63_8 (2) | | | | | | | | | +--Pseudomonas aeruginosa UCBPP-PA14 (1) | | | | | | | | | +--Pseudomonas stutzeri A1501 (6) | | | | | | | | | +--Pseudomonas sp. UK4 (1) | | | | | | | | | +--Pseudomonas putida CSV86 (1) | | | | | | | | | +--Pseudomonas fuscovaginae (1) | | | | | | | | | +--Pseudomonas sp. M47T1 (1) | | | | | | | | | +--Pseudomonas sp. BAY1663 (1) | | | | | | | | | +--Pseudomonas (12) | | | | | | | | | +--Pseudomonasstutzerigroup (3) | | | | | | | | | | | +--Pseudomonas balearica DSM 6083 (3) | | | | | | | | | +--Pseudomonaspertucinogenagroup (1) | | | | | | | | | | | +--Pseudomonas denitrificans ATCC 13867 (1) | | | | | | | | | +--Pseudomonasaeruginosagroup (4) | | | | | | | | | | | +--Pseudomonasoleovorans/pseudoalcaligenesgroup (4) | | | | | | | | | | | +--Pseudomonas pseudoalcaligenes KF707 = NBRC 110670 (4) | | | | | | | | | +--Pseudomonas taeanensis MS-3 (4) | | | | | | | +--Moraxellaceae (6) | | | | | | | +--Acinetobacter sp. NCu2D-2 (4) | | | | | | | +--Acinetobacter (2) | | | | | | | +--Acinetobacter haemolyticus CIP 64.3 (2) | | | | | +--Magnetococcus sp. MC-1 (5) | | | | | +--Betaproteobacteria (164) | | | | | +--unclassifiedBetaproteobacteria (2) | | | | | | | +--Candidatus Accumulibacter sp. 66-26 (1) | | | | | | | +--Betaproteobacteria bacterium RBG_16_56_24 (1) | | | | | +--Gallionellales (3) | | | | | | | +--Gallionellaceae (3) | | | | | | | +--Gallionella capsiferriformans ES-2 (1) | | | | | | | +--Candidatus Gallionella acididurans (2) | | | | | +--Burkholderiales (157) | | | | | | | +--Alcaligenaceae (8) | | | | | | | | | +--Bordetella petrii (8) | | | | | | | +--Alcaligenaceae bacterium BZ59 (1) | | | | | | | +--Burkholderiaceae (115) | | | | | | | | | +--Burkholderia xenovorans LB400 (3) | | | | | | | | | +--Burkholderia sp. ST111 (4) | | | | | | | | | +--Burkholderia fungorum (3) | | | | | | | | | +--Burkholderia sp. CCGE1003 (1) | | | | | | | | | +--Paraburkholderia ribeironis (2) | | | | | | | | | +--Candidatus Burkholderia kirkii UZHbot1 (1) | | | | | | | | | +--Burkholderia graminis C4D1M (1) | | | | | | | | | +--Burkholderia glathei (2) | | | | | | | | | +--Burkholderia sp. LMG 22936 (2) | | | | | | | | | +--Cupriavidus taiwanensis (1) | | | | | | | | | +--Burkholderia phenazinium (1) | | | | | | | | | +--Burkholderia phymatum STM815 (10) | | | | | | | | | +--Burkholderia sp. BR2004143571 (5) | | | | | | | | | +--Cupriavidus sp. SK-3 (3) | | | | | | | | | +--Burkholderia sp. SRS-W-2-2016 (3) | | | | | | | | | +--Ralstonia pickettii 12J (2) | | | | | | | | | +--Cupriavidus metallidurans CH34 (4) | | | | | | | | | +--Cupriavidus sp. UYMMa02A (2) | | | | | | | | | +--Caballeronia calidae (5) | | | | | | | | | +--Burkholderia sp. LMG 22934 (4) | | | | | | | | | +--Paraburkholderia susongensis (1) | | | | | | | | | +--Burkholderia sp. H160 (2) | | | | | | | | | +--Paraburkholderia ginsengiterrae (1) | | | | | | | | | +--Burkholderia sp. SD3175 (2) | | | | | | | | | +--Burkholderia sp. AD24 (1) | | | | | | | | | +--Caballeronia udeis (4) | | | | | | | | | +--Burkholderia rhizoxinica HKI 454 (4) | | | | | | | | | +--Burkholderia sp. OLGA172 (10) | | | | | | | | | +--Burkholderia sp. BR2009044596 (10) | | | | | | | | | +--Burkholderia (4) | | | | | | | | | | | +--Burkholderia singularis (1) | | | | | | | | | | | +--Burkholderia thailandensis MSMB43 (1) | | | | | | | | | | | +--Burkholderia latens (1) | | | | | | | | | | | +--Burkholderia ambifaria MEX-5 (1) | | | | | | | | | +--Burkholderia sp. A9 (1) | | | | | | | | | +--Burkholderia sp. Bk (2) | | | | | | | | | +--Burkholderia sp. LMG 22940 (5) | | | | | | | | | +--Caballeronia (2) | | | | | | | | | | | +--Caballeronia glathei PML1(12) (2) | | | | | | | | | +--Cupriavidus sp. USMAA2-4 (2) | | | | | | | | | +--Burkholderia caribensis (2) | | | | | | | | | +--Candidatus Burkholderia verschuerenii (3) | | | | | | | +--unclassifiedBurkholderiales (3) | | | | | | | | | +--Burkholderiales bacterium RIFCSPHIGHO2_12_63_9 (1) | | | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_12_FULL_65_40 (1) | | | | | | | | | +--BurkholderialesGeneraincertaesedis (1) | | | | | | | | | +--Ideonella sakaiensis (1) | | | | | | | +--Oxalobacteraceae (9) | | | | | | | | | +--Janthinobacterium sp. KBS0711 (1) | | | | | | | | | +--Duganella sp. Sac-22 (1) | | | | | | | | | +--Massilia (1) | | | | | | | | | | | +--Massilia timonae CCUG 45783 (1) | | | | | | | | | +--Noviherbaspirillum sp. Root189 (2) | | | | | | | | | +--Herminiimonas arsenicoxydans (2) | | | | | | | | | +--Herbaspirillum sp. TSA66 (2) | | | | | | | +--Comamonadaceae (21) | | | | | | | +--Polaromonas sp. JS666 (5) | | | | | | | +--Acidovorax sp. 12322-1 (1) | | | | | | | +--Acidovorax delafieldii 2AN (1) | | | | | | | +--Acidovorax sp. Leaf160 (1) | | | | | | | +--Comamonas (1) | | | | | | | | | +--Comamonas aquatica DA1877 (1) | | | | | | | +--Acidovorax sp. JS42 (2) | | | | | | | +--Comamonas testosteroni KF-1 (4) | | | | | | | +--Acidovorax sp. RAC01 (1) | | | | | | | +--Hydrogenophaga sp. T4 (1) | | | | | | | +--Curvibacter sp. GWA2_64_110 (1) | | | | | | | +--Acidovorax sp. 65-7 (2) | | | | | | | +--Rhodoferax saidenbachensis (1) | | | | | +--Rhodocyclales (2) | | | | | +--Rhodocyclaceae (2) | | | | | +--Petrobacter sp. JHK30 (1) | | | | | +--Thauera (1) | | | | | +--Thauera terpenica 58Eu (1) | | | +--unclassifiedBacteria (6) | | | | | +--bacterium F083 (1) | | | | | +--Bacteriacandidatephyla (5) | | | | | +--Patescibacteriagroup (1) | | | | | | | +--Parcubacteriagroup (1) | | | | | | | +--Candidatus Uhrbacteria bacterium GW2011_GWF2_46_218 (1) | | | | | +--Candidatus Raymondbacteria bacterium RIFOXYD12_FULL_49_13 (3) | | | | | +--Candidatus Desantisbacteria bacterium CG2_30_40_21 (1) | | | +--Planctomycetes (3) | | | | | +--Planctomycetacia (3) | | | | | +--Planctomycetales (3) | | | | | +--Candidatus Scalindua brodae (1) | | | | | +--Candidatus Kuenenia stuttgartiensis (1) | | | | | +--Candidatus Brocadia fulgida (1) | | | +--Firmicutes (59) | | | | | +--Clostridia (42) | | | | | | | +--Thermoanaerobacterales (1) | | | | | | | | | +--ThermoanaerobacteralesFamilyIII.IncertaeSedis (1) | | | | | | | | | +--Syntrophaceticus schinkii (1) | | | | | | | +--butyrate-producing bacterium SM4/1 (1) | | | | | | | +--Clostridiales bacterium BV3C26 (1) | | | | | | | +--Clostridiales (39) | | | | | | | +--Ruminococcaceae (2) | | | | | | | | | +--Bacteroides cellulosolvens ATCC 35603 (1) | | | | | | | | | +--Faecalibacterium prausnitzii SL3/3 (1) | | | | | | | +--ClostridialesFamilyXI.IncertaeSedis (3) | | | | | | | | | +--Anaerococcus prevotii DSM 20548 (1) | | | | | | | | | +--Peptoniphilus asaccharolyticus DSM 20463 (1) | | | | | | | | | +--Peptoniphilus sp. oral taxon 375 str. F0436 (1) | | | | | | | +--ClostridialesFamilyXII.IncertaeSedis (2) | | | | | | | | | +--Fusibacter sp. 3-D3-R-P8ASC2010 (2) | | | | | | | +--Lachnospiraceae bacterium A2 (2) | | | | | | | +--Eubacteriaceae (3) | | | | | | | | | +--Eubacterium rectale ATCC 33656 (2) | | | | | | | | | +--Eubacterium siraeum 70/3 (1) | | | | | | | +--Clostridiaceae (14) | | | | | | | | | +--Clostridium pasteurianum BC1 (2) | | | | | | | | | +--Clostridium beijerinckii NCIMB 8052 (2) | | | | | | | | | +--Clostridium sp. DL-VIII (1) | | | | | | | | | +--Clostridium puniceum (2) | | | | | | | | | +--Alkaliphilus metalliredigens QYMF (7) | | | | | | | +--Lachnospiraceae (1) | | | | | | | | | +--Roseburia hominis A2-183 (1) | | | | | | | +--Pseudoflavonifractor capillosus ATCC 29799 (6) | | | | | | | +--Peptococcaceae (3) | | | | | | | | | +--Desulfotomaculum gibsoniae DSM 7213 (1) | | | | | | | | | +--Desulfosporosinus acidiphilus SJ4 (1) | | | | | | | | | +--Desulfosporosinus orientis DSM 765 (1) | | | | | | | +--Catabacteriaceae (2) | | | | | | | | | +--Catabacter hongkongensis (2) | | | | | | | +--Eubacteriaceae bacterium ACC19a (1) | | | | | +--Lactobacillales (12) | | | | | | | +--Streptococcaceae (10) | | | | | | | | | +--Streptococcus equi subsp. zooepidemicus (2) | | | | | | | | | +--Streptococcus pneumoniae AP200 (1) | | | | | | | | | +--Streptococcus pseudoporcinus LQ 940-04 (2) | | | | | | | | | +--Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 (5) | | | | | | | +--Enterococcaceae (1) | | | | | | | | | +--Enterococcus faecalis CH188 (1) | | | | | | | +--Aerococcaceae (1) | | | | | | | +--Aerococcus urinae ACS-120-V-Col10a (1) | | | | | +--Bacillales (5) | | | | | +--Alicyclobacillaceae (5) | | | | | +--Alicyclobacillus ferrooxydans (5) | | | +--Chloroflexi (9) | | | | | +--Ktedonobacteria (4) | | | | | | | +--Ktedonobacterales (4) | | | | | | | +--Ktedonobacteraceae (4) | | | | | | | +--Ktedonobacter racemifer DSM 44963 (4) | | | | | +--Herpetosiphonales (3) | | | | | | | +--Herpetosiphonaceae (3) | | | | | | | +--Herpetosiphon aurantiacus DSM 785 (3) | | | | | +--Kouleothrix aurantiaca (2) | | | +--Deinococcus-Thermus (1) | | | | | +--Deinococci (1) | | | | | +--Deinococcales (1) | | | | | +--Deinococcaceae (1) | | | | | +--Deinococcus geothermalis DSM 11300 (1) | | | +--Nitrospinae/Tectomicrobiagroup (1) | | | | | +--CandidatusTectomicrobia (1) | | | | | +--Candidatus Entotheonella sp. TSY2 (1) | | | +--Terrabacteriagroup (70) | | | | | +--Actinobacteria (27) | | | | | | | +--Acidimicrobiia (5) | | | | | | | | | +--Acidimicrobiales (5) | | | | | | | | | +--Acidimicrobiaceae (5) | | | | | | | | | +--Acidithrix ferrooxidans (5) | | | | | | | +--Actinobacteria (22) | | | | | | | +--Streptomycetales (13) | | | | | | | | | +--Streptomycetaceae (13) | | | | | | | | | +--Streptomyces sp. WM4235 (1) | | | | | | | | | +--Streptomyces sp. WAC00263 (1) | | | | | | | | | +--Streptomyces sp. NRRL F-5122 (1) | | | | | | | | | +--Streptomyces sp. NRRL WC-3618 (2) | | | | | | | | | +--Streptomyces (5) | | | | | | | | | | | +--Streptomyces ipomoeae 91-03 (5) | | | | | | | | | +--Streptomyces sp. SolWspMP-5a-2 (1) | | | | | | | | | +--Streptomyces sp. DI166 (1) | | | | | | | | | +--Streptomyces sp. AVP053U2 (1) | | | | | | | +--unclassifiedActinobacteria(class) (4) | | | | | | | | | +--Actinobacteria bacterium OK006 (4) | | | | | | | +--Micromonosporales (1) | | | | | | | | | +--Micromonosporaceae (1) | | | | | | | | | +--Micromonospora sp. CB01531 (1) | | | | | | | +--Pseudonocardiales (1) | | | | | | | | | +--Pseudonocardiaceae (1) | | | | | | | | | +--Alloactinosynnema sp. L-07 (1) | | | | | | | +--Frankiales (2) | | | | | | | | | +--Frankiaceae (2) | | | | | | | | | +--Frankia sp. BMG5.36 (1) | | | | | | | | | +--Frankia sp. EUN1h (1) | | | | | | | +--Micrococcales (1) | | | | | | | +--Micrococcaceae (1) | | | | | | | +--Enteractinococcus helveticum (1) | | | | | +--Armatimonadetes (1) | | | | | | | +--Chthonomonadetes (1) | | | | | | | +--Chthonomonadales (1) | | | | | | | +--Chthonomonadaceae (1) | | | | | | | +--Chthonomonas (1) | | | | | | | +--Chthonomonas calidirosea T49 (1) | | | | | +--Cyanobacteria/Melainabacteriagroup (6) | | | | | | | +--Cyanobacteria (6) | | | | | | | +--unclassifiedCyanobacteria (2) | | | | | | | | | +--Cyanobacteria bacterium 13_1_40CM_2_61_4 (2) | | | | | | | +--Synechococcales (1) | | | | | | | | | +--Leptolyngbyaceae (1) | | | | | | | | | +--Leptolyngbya sp. Heron Island J (1) | | | | | | | +--Nostocales (3) | | | | | | | +--Tolypothrichaceae (1) | | | | | | | | | +--Hassallia (1) | | | | | | | | | +--Hassallia byssoidea VB512170 (1) | | | | | | | +--Rivulariaceae (2) | | | | | | | +--Calothrix sp. HK-06 (1) | | | | | | | +--Calothrix (1) | | | | | | | +--Calothrix sp. PCC 6303 (1) | | | | | +--Chloroflexi (2) | | | | | | | +--Ktedonobacteria (1) | | | | | | | | | +--Ktedonobacterales (1) | | | | | | | | | +--Ktedonobacteraceae (1) | | | | | | | | | +--Ktedonobacter sp. 13_2_20CM_2_56_8 (1) | | | | | | | +--unclassifiedChloroflexi (1) | | | | | | | +--Chloroflexi bacterium 54-19 (1) | | | | | +--Firmicutes (34) | | | | | +--Clostridia (24) | | | | | | | +--Halanaerobiales (5) | | | | | | | | | +--Halobacteroidaceae (5) | | | | | | | | | +--Orenia metallireducens (5) | | | | | | | +--Clostridiales (19) | | | | | | | +--Lachnospiraceae (12) | | | | | | | | | +--Lachnospiraceae bacterium COE1 (1) | | | | | | | | | +--Lachnospiraceae bacterium 3-2 (3) | | | | | | | | | +--Hespellia (1) | | | | | | | | | | | +--Hespellia stercorisuis DSM 15480 (1) | | | | | | | | | +--Dorea sp. 5-2 (2) | | | | | | | | | +--Lachnospiraceae bacterium M18-1 (3) | | | | | | | | | +--Lachnoclostridium sp. YL32 (2) | | | | | | | +--Ruminococcaceae (1) | | | | | | | | | +--Anaerotruncus sp. G3(2012) (1) | | | | | | | +--Peptococcaceae (1) | | | | | | | | | +--Peptococcaceae bacterium BRH_c8a (1) | | | | | | | +--unclassifiedClostridiales (2) | | | | | | | | | +--Flavonifractor (1) | | | | | | | | | | | +--Flavonifractor plautii ATCC 29863 (1) | | | | | | | | | +--Clostridiales bacterium GWB2_37_7 (1) | | | | | | | +--Clostridiaceae (1) | | | | | | | | | +--Clostridium (1) | | | | | | | | | +--Clostridium saccharobutylicum DSM 13864 (1) | | | | | | | +--Eubacteriaceae (2) | | | | | | | +--Eubacterium (1) | | | | | | | | | +--Eubacterium plexicaudatum ASF492 (1) | | | | | | | +--Acetobacterium (1) | | | | | | | +--Acetobacterium woodii DSM 1030 (1) | | | | | +--Bacilli (4) | | | | | | | +--Bacillales (4) | | | | | | | +--Paenibacillaceae (2) | | | | | | | | | +--Paenibacillus sp. Soil522 (1) | | | | | | | | | +--Paenibacillus ferrarius (1) | | | | | | | +--unclassifiedBacillales (2) | | | | | | | +--Acidibacillus ferrooxidans (2) | | | | | +--Negativicutes (1) | | | | | | | +--Selenomonadales (1) | | | | | | | +--Sporomusaceae (1) | | | | | | | +--Pelosinus (1) | | | | | | | +--Pelosinus fermentans B4 (1) | | | | | +--Firmicutes bacterium CAG:466 (1) | | | | | +--Tissierellia (4) | | | | | +--Tissierellales (2) | | | | | | | +--Tissierellaceae (1) | | | | | | | | | +--Tissierella (1) | | | | | | | | | +--Tissierella creatinophila DSM 6911 (1) | | | | | | | +--Peptoniphilaceae (1) | | | | | | | +--Anaerosphaera sp. HMSC064C01 (1) | | | | | +--unclassifiedTissierellia (2) | | | | | +--[Clostridium] ultunense Esp (1) | | | | | +--Tissierellia bacterium S5-A11 (1) | | | +--Chlorobi (14) | | | | | +--Chlorobia (14) | | | | | +--Chlorobiales (14) | | | | | +--Chlorobiaceae (14) | | | | | +--Chlorobium/Pelodictyongroup (9) | | | | | | | +--Chlorobium luteolum DSM 273 (5) | | | | | | | +--Chlorobium phaeobacteroides BS1 (2) | | | | | | | +--Pelodictyon phaeoclathratiforme BU-1 (2) | | | | | +--Prosthecochloris aestuarii DSM 271 (5) | | | +--FCBgroup (56) | | | +--CandidatusCloacimonetes (1) | | | | | +--Candidatus Cloacimonetes bacterium 4572_55 (1) | | | +--Bacteroidetes/Chlorobigroup (55) | | | +--Ignavibacteriae (1) | | | | | +--Ignavibacteria (1) | | | | | +--Ignavibacteria bacterium RBG_16_36_9 (1) | | | +--Bacteroidetes (53) | | | | | +--Sphingobacteriia (1) | | | | | | | +--Sphingobacteriales (1) | | | | | | | +--Sphingobacteriaceae (1) | | | | | | | +--Sphingobacterium deserti (1) | | | | | +--Bacteroidia (42) | | | | | | | +--Bacteroidia bacterium 43-41 (1) | | | | | | | +--Bacteroidales (41) | | | | | | | +--Rikenellaceae (4) | | | | | | | | | +--Alistipes sp. An66 (1) | | | | | | | | | +--Mucinivorans hirudinis (2) | | | | | | | | | +--Alistipes (1) | | | | | | | | | +--Alistipes finegoldii CAG:68 (1) | | | | | | | +--Porphyromonadaceae (15) | | | | | | | | | +--Tannerella (4) | | | | | | | | | | | +--Tannerella sp. oral taxon BU063 isolate Cell 1/3 (4) | | | | | | | | | +--Parabacteroides (9) | | | | | | | | | | | +--Parabacteroides goldsteinii dnLKV18 (9) | | | | | | | | | +--Porphyromonas sp. COT-108 OH1349 (1) | | | | | | | | | +--Barnesiella (1) | | | | | | | | | +--Barnesiella viscericola DSM 18177 (1) | | | | | | | +--unclassifiedBacteroidales (1) | | | | | | | | | +--Bacteroidales bacterium 43_8 (1) | | | | | | | +--Bacteroidaceae (17) | | | | | | | | | +--Bacteroides caecimuris (4) | | | | | | | | | +--Bacteroides sp. 43_108 (1) | | | | | | | | | +--Bacteroides (12) | | | | | | | | | +--Bacteroides sp. CAG:754 (2) | | | | | | | | | +--Bacteroides pyogenes JCM 10003 (1) | | | | | | | | | +--Bacteroides reticulotermitis JCM 10512 (1) | | | | | | | | | +--Bacteroides oleiciplenus YIT 12058 (7) | | | | | | | | | +--Bacteroides nordii CL02T12C05 (1) | | | | | | | +--Prevotellaceae (4) | | | | | | | +--Alloprevotella (1) | | | | | | | | | +--Prevotella sp. oral taxon 473 str. F0040 (1) | | | | | | | +--Prevotella (3) | | | | | | | +--Prevotella bivia DSM 20514 (2) | | | | | | | +--Prevotella pleuritidis F0068 (1) | | | | | +--Flavobacteriia (2) | | | | | | | +--Flavobacteriales (2) | | | | | | | +--Flavobacteriaceae (2) | | | | | | | +--Flavobacterium akiainvivens (2) | | | | | +--Cytophagia (5) | | | | | | | +--Cytophagales (5) | | | | | | | +--Cyclobacteriaceae (3) | | | | | | | | | +--Lunatimonas lonarensis (3) | | | | | | | +--Cytophagaceae (2) | | | | | | | +--Fibrella (1) | | | | | | | | | +--Fibrella aestuarina BUZ 2 (1) | | | | | | | +--Fibrisoma (1) | | | | | | | +--Fibrisoma limi BUZ 3 (1) | | | | | +--unclassifiedBacteroidetes (3) | | | | | +--Bacteroidetes bacterium 4484_276 (1) | | | | | +--Bacteroidetes bacterium 46-16 (1) | | | | | +--Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_35_15 (1) | | | +--Chlorobi (1) | | | +--Chlorobia (1) | | | +--Chlorobiales (1) | | | +--Chlorobiaceae (1) | | | +--Prosthecochloris sp. HL-130-GSB (1) | +--Viruses (1) | | | +--dsDNAviruses,noRNAstage (1) | | | +--Caudovirales (1) | | | +--Myoviridae (1) | | | +--Pseudomonas phage phi3 (1) | +--Archaea (69) | | | +--TACKgroup (2) | | | | | +--CandidatusBathyarchaeota (2) | | | | | +--Candidatus Bathyarchaeota archaeon RBG_13_38_9 (2) | | | +--Asgardgroup (7) | | | | | +--CandidatusLokiarchaeota (5) | | | | | | | +--Lokiarchaeum sp. GC14_75 (5) | | | | | +--Candidatus Heimdallarchaeota archaeon LC_3 (2) | | | +--Euryarchaeota (60) | | | +--Methanomicrobia (59) | | | | | +--Methanomicrobiales (15) | | | | | | | +--Methanospirillaceae (11) | | | | | | | | | +--Methanospirillum hungatei JF-1 (11) | | | | | | | +--Methanomicrobiaceae (3) | | | | | | | | | +--Methanoculleus sp. MAB1 (2) | | | | | | | | | +--Methanoculleus (1) | | | | | | | | | +--Methanoculleus bourgensis MS2 (1) | | | | | | | +--unclassifiedMethanomicrobiales (1) | | | | | | | +--Methanomicrobiales archaeon 53_19 (1) | | | | | +--Methanosarcinales (44) | | | | | +--Methanosarcinaceae (36) | | | | | | | +--Methanococcoides burtonii DSM 6242 (10) | | | | | | | +--Methanosarcina barkeri str. Fusaro (5) | | | | | | | +--Methanosarcina mazei Go1 (2) | | | | | | | +--Methanolobus (1) | | | | | | | | | +--Methanolobus psychrophilus R15 (1) | | | | | | | +--Methanosarcina acetivorans C2A (15) | | | | | | | +--Methanosarcina sp. MTP4 (1) | | | | | | | +--Methanosarcina sp. Ant1 (1) | | | | | | | +--Methanomethylovorans (1) | | | | | | | +--Methanomethylovorans hollandica DSM 15978 (1) | | | | | +--CandidatusMethanoperedenaceae (8) | | | | | +--Candidatus Methanoperedens nitroreducens (3) | | | | | +--Candidatus Methanoperedens sp. BLZ1 (5) | | | +--Thermoplasmata (1) | | | +--methanogenic archaeon ISO4-H5 (1) | +--haloalkaliphilic bacterium ACht6-1 (1)