# Species tree for RF01998 # Generated from Rfam version 14.10 | +--methanotrophic endosymbiont of Bathymodiolus azoricus (Menez Gwen) (2) | +--Eukaryota (15) | | | +--Metazoa (13) | | | | | +--Nematoda (1) | | | | | | | +--Chromadorea (1) | | | | | | | +--Rhabditida (1) | | | | | | | +--Strongylida (1) | | | | | | | +--Trichostrongyloidea (1) | | | | | | | +--Haemonchidae (1) | | | | | | | +--Haemonchinae (1) | | | | | | | +--Haemonchus contortus (1) | | | | | +--Chordata (1) | | | | | | | +--Tunicata (1) | | | | | | | +--Ascidiacea (1) | | | | | | | +--Enterogona (1) | | | | | | | +--Phlebobranchia (1) | | | | | | | +--Cionidae (1) | | | | | | | +--Ciona savignyi (1) | | | | | +--Arthropoda (11) | | | | | +--Hexapoda (10) | | | | | | | +--Insecta (10) | | | | | | | +--Pterygota (10) | | | | | | | +--Neoptera (10) | | | | | | | +--Endopterygota (4) | | | | | | | | | +--Diptera (4) | | | | | | | | | +--Nematocera (3) | | | | | | | | | | | +--Culicoidea (3) | | | | | | | | | | | +--Culicidae (3) | | | | | | | | | | | +--Culicinae (3) | | | | | | | | | | | +--Aedini (3) | | | | | | | | | | | +--Aedes (3) | | | | | | | | | | | +--Aedes aegypti (yellow fever mosquito) (3) | | | | | | | | | +--Brachycera (1) | | | | | | | | | +--Muscomorpha (1) | | | | | | | | | +--Hippoboscoidea (1) | | | | | | | | | +--Glossinidae (1) | | | | | | | | | +--Glossina pallidipes (1) | | | | | | | +--Paraneoptera (6) | | | | | | | +--Hemiptera (6) | | | | | | | +--Euhemiptera (6) | | | | | | | +--Heteroptera (6) | | | | | | | +--Panheteroptera (6) | | | | | | | +--Cimicomorpha (6) | | | | | | | +--Reduviidae (6) | | | | | | | +--Triatominae (6) | | | | | | | +--Rhodnius prolixus (6) | | | | | +--Chelicerata (1) | | | | | +--Arachnida (1) | | | | | +--Acari (1) | | | | | +--Parasitiformes (1) | | | | | +--Ixodida (1) | | | | | +--Ixodoidea (1) | | | | | +--Ixodidae (1) | | | | | +--Ixodinae (1) | | | | | +--Ixodes scapularis (black-legged tick) (1) | | | +--Rhizaria (1) | | | | | +--Foraminifera (1) | | | | | +--Reticulomyxidae (1) | | | | | +--Reticulomyxa filosa (1) | | | +--Viridiplantae (1) | | | +--Streptophyta (1) | | | +--Embryophyta (1) | | | +--Tracheophyta (1) | | | +--Spermatophyta (1) | | | +--Magnoliophyta (1) | | | +--Liliopsida (1) | | | +--Poales (1) | | | +--Poaceae (1) | | | +--BEPclade (1) | | | +--Pooideae (1) | | | +--Triticeae (1) | | | +--Triticum urartu (1) | +--unclassifiedsequences (76) | | | +--metagenome sequence (15) | | | +--uncultured organism (1) | | | +--metagenomes (60) | | | +--stromatolite metagenome (1) | | | +--freshwater sediment metagenome (4) | | | +--epibiont metagenome (1) | | | +--mouse gut metagenome (2) | | | +--microbial mat metagenome (2) | | | +--human gut metagenome (21) | | | +--termite gut metagenome (11) | | | +--marine metagenome (18) | +--Bacteria (2248) | | | +--candidatedivisionNC10 (1) | | | | | +--NC10 bacterium 'Dutch sediment' (1) | | | +--Bacteroidetes bacterium 3B-2 (1) | | | +--Bacteroidetes (146) | | | | | +--Sphingobacteriia (5) | | | | | | | +--Sphingobacteriales (5) | | | | | | | +--Sphingobacteriaceae (3) | | | | | | | | | +--Sphingobacterium sp. 21 (1) | | | | | | | | | +--Mucilaginibacter paludis DSM 18603 (1) | | | | | | | | | +--Pedobacter nyackensis (1) | | | | | | | +--Chitinophagaceae (2) | | | | | | | +--Filimonas lacunae (1) | | | | | | | +--Niastella yeongjuensis (1) | | | | | +--Bacteroidia (67) | | | | | | | +--Bacteroidales (67) | | | | | | | +--Porphyromonadaceae (7) | | | | | | | | | +--Porphyromonas asaccharolytica DSM 20707 (7) | | | | | | | +--Bacteroidaceae (35) | | | | | | | | | +--Bacteroides thetaiotaomicron VPI-5482 (3) | | | | | | | | | +--Bacteroides dorei 5_1_36/D4 (1) | | | | | | | | | +--Bacteroides salanitronis DSM 18170 (1) | | | | | | | | | +--Bacteroides coprocola DSM 17136 (30) | | | | | | | +--Prevotellaceae (25) | | | | | | | +--Prevotella copri (1) | | | | | | | +--Prevotella corporis (1) | | | | | | | +--Prevotella copri DSM 18205 (1) | | | | | | | +--Prevotella disiens FB035-09AN (1) | | | | | | | +--Prevotella multisaccharivorax DSM 17128 (15) | | | | | | | +--Prevotella bergensis DSM 17361 (2) | | | | | | | +--Prevotella timonensis CRIS 5C-B1 (4) | | | | | +--Flavobacteriia (47) | | | | | | | +--Flavobacteriales (47) | | | | | | | +--Flavobacteriaceae (47) | | | | | | | +--Flavobacterium branchiophilum (4) | | | | | | | +--Gillisia sp. ck-I2-15 (1) | | | | | | | +--Zobellia galactanivorans (3) | | | | | | | +--Cellulophaga algicola DSM 14237 (9) | | | | | | | +--Flavobacterium sp. K1 (2) | | | | | | | +--Aequorivita sp. 8-1b (2) | | | | | | | +--Flavobacterium fryxellicola (3) | | | | | | | +--Salegentibacter sp. HD4 (1) | | | | | | | +--Flavobacterium johnsoniae UW101 (2) | | | | | | | +--Krokinobacter sp. 4H-3-7-5 (5) | | | | | | | +--Tenacibaculum sp. 35/09 (10) | | | | | | | +--Psychroflexus torquis ATCC 700755 (2) | | | | | | | +--Flavobacterium granuli (1) | | | | | | | +--Flavobacterium segetis (2) | | | | | +--Cytophagia (27) | | | | | +--Cytophagales (27) | | | | | +--Cyclobacteriaceae (2) | | | | | | | +--Belliella pelovolcani (2) | | | | | +--Cytophagaceae (20) | | | | | | | +--Leadbetterella byssophila DSM 17132 (19) | | | | | | | +--Pontibacter korlensis (1) | | | | | +--Cytophagaceae bacterium ANESC-S (3) | | | | | +--Flammeovirgaceae (2) | | | | | +--Marivirga tractuosa DSM 4126 (2) | | | +--Calditrichaeota (1) | | | | | +--Calditrichae (1) | | | | | +--Calditrichales (1) | | | | | +--Calditrichaceae (1) | | | | | +--Caldithrix sp. RBG_13_44_9 (1) | | | +--Thermotogae (7) | | | | | +--Thermotogales (7) | | | | | +--Thermotogaceae (7) | | | | | +--Thermotogaceae bacterium SulfLac1 (1) | | | | | +--Petrotoga mobilis SJ95 (6) | | | +--Acidobacteria (4) | | | | | +--unclassifiedAcidobacteria (2) | | | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10 (1) | | | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21 (1) | | | | | +--Acidobacteriia (1) | | | | | | | +--Acidobacteriales (1) | | | | | | | +--Acidobacteriales bacterium 13_2_20CM_55_8 (1) | | | | | +--Acidobacteriales (1) | | | | | +--Acidobacteriaceae (1) | | | | | +--Acidobacterium capsulatum ATCC 51196 (1) | | | +--PVCgroup (31) | | | | | +--Kiritimatiellaeota (1) | | | | | | | +--Kiritimatiellae (1) | | | | | | | +--Kiritimatiellales (1) | | | | | | | +--Kiritimatiellaceae (1) | | | | | | | +--Kiritimatiella glycovorans (1) | | | | | +--Planctomycetes (24) | | | | | | | +--Planctomycetes bacterium SCN 63-9 (1) | | | | | | | +--Phycisphaerae (1) | | | | | | | | | +--Phycisphaerae bacterium ST-NAGAB-D1 (1) | | | | | | | +--Planctomycetia (21) | | | | | | | | | +--Planctomycetales (21) | | | | | | | | | +--Isosphaeraceae (2) | | | | | | | | | | | +--Singulisphaera (2) | | | | | | | | | | | +--Singulisphaera acidiphila DSM 18658 (2) | | | | | | | | | +--Planctomycetaceae (19) | | | | | | | | | +--Rhodopirellula (1) | | | | | | | | | | | +--Rhodopirellula maiorica SM1 (1) | | | | | | | | | +--Fuerstia marisgermanicae (5) | | | | | | | | | +--Pirellula sp. SH-Sr6A (13) | | | | | | | +--Planctomycetes bacterium RIFOXYB12_FULL_42_10 (1) | | | | | +--Verrucomicrobia (1) | | | | | | | +--Opitutae (1) | | | | | | | +--Opitutales (1) | | | | | | | +--Opitutaceae (1) | | | | | | | +--Opitutaceae bacterium TSB47 (1) | | | | | +--Lentisphaerae (5) | | | | | +--unclassifiedLentisphaerae (5) | | | | | +--Lentisphaerae bacterium RIFOXYB12_FULL_65_16 (1) | | | | | +--Lentisphaerae bacterium GWF2_57_35 (1) | | | | | +--Lentisphaerae bacterium RIFOXYC12_FULL_60_16 (1) | | | | | +--Lentisphaerae bacterium RIFOXYA12_FULL_48_11 (2) | | | +--Haloplasmatales (2) | | | | | +--Haloplasmataceae (2) | | | | | +--Haloplasma contractile SSD-17B (2) | | | +--Nitrospirae (3) | | | | | +--Nitrospirae bacterium GWC2_57_13 (1) | | | | | +--Nitrospirae bacterium RBG_13_39_12 (1) | | | | | +--Nitrospirae bacterium RBG_19FT_COMBO_55_12 (1) | | | +--Actinobacteria (5) | | | | | +--Coriobacteridae (1) | | | | | | | +--Coriobacteriales (1) | | | | | | | +--Coriobacterineae (1) | | | | | | | +--Coriobacteriaceae bacterium BV3Ac1 (1) | | | | | +--Actinobacteridae (4) | | | | | +--Actinomycetales (4) | | | | | +--Corynebacterineae (2) | | | | | | | +--Mycobacteriaceae (2) | | | | | | | +--Mycobacterium intermedium (1) | | | | | | | +--Mycobacterium heidelbergense (1) | | | | | +--Streptosporangineae (1) | | | | | | | +--Streptosporangiaceae (1) | | | | | | | +--Microbispora rosea (1) | | | | | +--Frankineae (1) | | | | | +--Frankiaceae (1) | | | | | +--Frankia sp. CcI3 (1) | | | +--Proteobacteria (671) | | | | | +--delta proteobacterium MLMS-1 (2) | | | | | +--Alphaproteobacteria (39) | | | | | | | +--Rhizobiales bacterium WSM3557 (1) | | | | | | | +--Rhizobiales (34) | | | | | | | | | +--Brucellaceae (6) | | | | | | | | | | | +--Ochrobactrum anthropi ATCC 49188 (6) | | | | | | | | | +--Rhizobiaceae (16) | | | | | | | | | | | +--Shinella sp. DD12 (1) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (8) | | | | | | | | | | | | | +--Rhizobium yanglingense (6) | | | | | | | | | | | | | +--Rhizobium sp. Pop5 (1) | | | | | | | | | | | | | +--Rhizobium sp. YS-1r (1) | | | | | | | | | | | +--Sinorhizobium/Ensifergroup (7) | | | | | | | | | | | +--Sinorhizobium meliloti 1021 (2) | | | | | | | | | | | +--Sinorhizobium fredii NGR234 (4) | | | | | | | | | | | +--Sinorhizobium meliloti (1) | | | | | | | | | +--Phyllobacteriaceae (3) | | | | | | | | | | | +--Mesorhizobium sp. L48C026A00 (2) | | | | | | | | | | | +--Mesorhizobium (1) | | | | | | | | | | | +--Mesorhizobium metallidurans STM 2683 (1) | | | | | | | | | +--Bradyrhizobiaceae (9) | | | | | | | | | +--Bradyrhizobium sp. BR 10245 (1) | | | | | | | | | +--Bradyrhizobium japonicum USDA 110 (2) | | | | | | | | | +--Bradyrhizobium sp. BTAi1 (1) | | | | | | | | | +--Bradyrhizobium erythrophlei (1) | | | | | | | | | +--Bradyrhizobium sp. NAS80.1 (2) | | | | | | | | | +--Bradyrhizobium sp. AS23.2 (2) | | | | | | | +--Rhodospirillales (1) | | | | | | | | | +--Rhodospirillaceae (1) | | | | | | | | | +--Azospirillum amazonense Y2 (1) | | | | | | | +--Sphingomonadales (3) | | | | | | | +--Sphingomonadaceae (3) | | | | | | | +--Novosphingobium sp. AP12 (1) | | | | | | | +--Sphingopyxis sp. BZ30 (1) | | | | | | | +--Sphingobium (1) | | | | | | | +--Sphingobium quisquiliarum P25 (1) | | | | | +--Magnetococcus sp. MC-1 (6) | | | | | +--Gammaproteobacteria (328) | | | | | | | +--unclassifiedGammaproteobacteria (4) | | | | | | | | | +--sulfur-oxidizingsymbionts (1) | | | | | | | | | | | +--Candidatus Thiodiazotropha endolucinida (1) | | | | | | | | | +--Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_10 (1) | | | | | | | | | +--Gammaproteobacteria bacterium GWF2_41_13 (1) | | | | | | | | | +--Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 (1) | | | | | | | +--Enterobacterales (3) | | | | | | | | | +--Yersiniaceae (1) | | | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | +--Enterobacteriaceae (1) | | | | | | | | | | | +--Klebsiella (1) | | | | | | | | | | | +--Klebsiella pneumoniae IS43 (1) | | | | | | | | | +--Erwiniaceae (1) | | | | | | | | | +--Pantoea sp. PSNIH2 (1) | | | | | | | +--Aeromonadales (1) | | | | | | | | | +--Succinivibrionaceae (1) | | | | | | | | | +--Succinatimonas hippei YIT 12066 (1) | | | | | | | +--Methylococcales (9) | | | | | | | | | +--Methylothermaceae (1) | | | | | | | | | | | +--Methylothermaceae bacteria B42 (1) | | | | | | | | | +--Crenotrichaceae (2) | | | | | | | | | | | +--Crenothrix polyspora (2) | | | | | | | | | +--Methylococcaceae (6) | | | | | | | | | +--Methylomonas methanica MC09 (1) | | | | | | | | | +--Methylomicrobium album BG8 (2) | | | | | | | | | +--Methyloprofundus sedimenti (3) | | | | | | | +--Alteromonadales (41) | | | | | | | | | +--Colwelliaceae (5) | | | | | | | | | | | +--Thalassomonas actiniarum (1) | | | | | | | | | | | +--Colwellia sp. MT41 (4) | | | | | | | | | +--Pseudoalteromonadaceae (8) | | | | | | | | | | | +--Pseudoalteromonas piscicida (1) | | | | | | | | | | | +--Pseudoalteromonas tunicata D2 (2) | | | | | | | | | | | +--Pseudoalteromonas (2) | | | | | | | | | | | | | +--Pseudoalteromonas citrea DSM 8771 (2) | | | | | | | | | | | +--Pseudoalteromonas atlantica T6c (2) | | | | | | | | | | | +--Pseudoalteromonas porphyrae (1) | | | | | | | | | +--Shewanellaceae (11) | | | | | | | | | | | +--Shewanella oneidensis MR-1 (2) | | | | | | | | | | | +--Shewanella sp. P1-14-1 (1) | | | | | | | | | | | +--Shewanella baltica OS155 (1) | | | | | | | | | | | +--Shewanella baltica OS195 (1) | | | | | | | | | | | +--Shewanella baltica OS185 (1) | | | | | | | | | | | +--Shewanella benthica KT99 (4) | | | | | | | | | | | +--Shewanella putrefaciens 200 (1) | | | | | | | | | +--Alteromonadaceae (17) | | | | | | | | | +--Marinobacter sp. BSs20148 (1) | | | | | | | | | +--Marinobacter (2) | | | | | | | | | | | +--Marinobacter santoriniensis NKSG1 (2) | | | | | | | | | +--Glaciecola sp. BSs20135 (1) | | | | | | | | | +--Marinobacter sp. ELB17 (1) | | | | | | | | | +--Marinobacter sp. T13-3 (1) | | | | | | | | | +--Marinobacter aquaeolei VT8 (1) | | | | | | | | | +--Marinobacter algicola DG893 (2) | | | | | | | | | +--Catenovulum (1) | | | | | | | | | | | +--Catenovulum agarivorans DS-2 (1) | | | | | | | | | +--Marinobacter lutaoensis (2) | | | | | | | | | +--Glaciecola (1) | | | | | | | | | | | +--Glaciecola pallidula DSM 14239 = ACAM 615 (1) | | | | | | | | | +--Marinobacter subterrani (2) | | | | | | | | | +--Marinobacter salinus (2) | | | | | | | +--Vibrionales (83) | | | | | | | | | +--Vibrionaceae (83) | | | | | | | | | +--Vibrio mytili (1) | | | | | | | | | +--Photobacterium proteolyticum (2) | | | | | | | | | +--Vibrio sp. C7 (1) | | | | | | | | | +--Vibrio cidicii (11) | | | | | | | | | +--Vibrio harveyi ATCC BAA-1116 (32) | | | | | | | | | +--Vibrio metschnikovii CIP 69.14 (8) | | | | | | | | | +--Photobacterium profundum SS9 (1) | | | | | | | | | +--Photobacterium sp. Gung47 (19) | | | | | | | | | +--Photobacterium profundum (5) | | | | | | | | | +--Vibrio cholerae (1) | | | | | | | | | +--Vibrio (2) | | | | | | | | | +--Vibrio rumoiensis 1S-45 (1) | | | | | | | | | +--Vibrio genomosp. F6 str. FF-238 (1) | | | | | | | +--Cellvibrionales (1) | | | | | | | | | +--Spongiibacteraceae (1) | | | | | | | | | +--gamma proteobacterium BDW918 (1) | | | | | | | +--Xanthomonadales (1) | | | | | | | | | +--Rhodanobacteraceae (1) | | | | | | | | | +--Rhodanobacter sp. 115 (1) | | | | | | | +--Thiotrichales (3) | | | | | | | | | +--Thiotrichaceae (3) | | | | | | | | | +--Achromatium sp. WMS2 (3) | | | | | | | +--Enterobacteriales (29) | | | | | | | | | +--Enterobacteriaceae (29) | | | | | | | | | +--Serratia marcescens (1) | | | | | | | | | +--Serratia sp. ATCC 39006 (2) | | | | | | | | | +--Serratia fonticola (4) | | | | | | | | | +--Escherichia coli CFT073 (1) | | | | | | | | | +--Escherichia coli SMS-3-5 (1) | | | | | | | | | +--Escherichia coli (2) | | | | | | | | | +--Yersinia bercovieri ATCC 43970 (1) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium (1) | | | | | | | | | +--Pantoea stewartii subsp. stewartii DC283 (5) | | | | | | | | | +--Escherichia sp. 4_1_40B (1) | | | | | | | | | +--Sodalis glossinidius str. 'morsitans' (7) | | | | | | | | | +--Xenorhabdus nematophila ATCC 19061 (1) | | | | | | | | | +--Klebsiella pneumoniae (1) | | | | | | | | | +--Escherichia coli ED1a (1) | | | | | | | +--Chromatiales (23) | | | | | | | | | +--Ectothiorhodospiraceae (13) | | | | | | | | | | | +--Thiorhodospira sibirica ATCC 700588 (2) | | | | | | | | | | | +--Halorhodospira (3) | | | | | | | | | | | | | +--Halorhodospira halochloris str. A (3) | | | | | | | | | | | +--Ectothiorhodospira sp. PHS-1 (2) | | | | | | | | | | | +--Thioalkalivibrio (1) | | | | | | | | | | | | | +--Thioalkalivibrio nitratireducens DSM 14787 (1) | | | | | | | | | | | +--Nitrococcus mobilis Nb-231 (4) | | | | | | | | | | | +--Acidiferrobacter thiooxydans (1) | | | | | | | | | +--Chromatiaceae (9) | | | | | | | | | | | +--Rheinheimera sp. A13L (1) | | | | | | | | | | | +--Thiorhodococcus drewsii AZ1 (2) | | | | | | | | | | | +--Allochromatium vinosum DSM 180 (2) | | | | | | | | | | | +--Thioflavicoccus (2) | | | | | | | | | | | | | +--Thioflavicoccus mobilis 8321 (2) | | | | | | | | | | | +--Nitrosococcus halophilus Nc4 (1) | | | | | | | | | | | +--Thiocapsa marina 5811 (1) | | | | | | | | | +--Chromatiales bacterium (ex Bugula neritina AB1) (1) | | | | | | | +--Oceanospirillales (74) | | | | | | | | | +--Hahellaceae (45) | | | | | | | | | | | +--Endozoicomonas numazuensis (24) | | | | | | | | | | | +--Hahella chejuensis KCTC 2396 (7) | | | | | | | | | | | +--Endozoicomonas montiporae (14) | | | | | | | | | +--Saccharospirillaceae (1) | | | | | | | | | | | +--Gynuella (1) | | | | | | | | | | | +--Gynuella sunshinyii YC6258 (1) | | | | | | | | | +--Endozoicomonaceae (1) | | | | | | | | | | | +--Endozoicomonas sp. (ex Bugula neritina AB1) (1) | | | | | | | | | +--Halomonadaceae (12) | | | | | | | | | | | +--Halomonas sp. 1513 (2) | | | | | | | | | | | +--Halomonas meridiana (3) | | | | | | | | | | | +--Halomonas sp. 54_146 (1) | | | | | | | | | | | +--Halomonas chromatireducens (3) | | | | | | | | | | | +--Halomonas sp. PBN3 (3) | | | | | | | | | +--Oceanospirillaceae (14) | | | | | | | | | | | +--Oleispira (4) | | | | | | | | | | | | | +--Oleispira antarctica RB-8 (4) | | | | | | | | | | | +--Nitrincola nitratireducens (1) | | | | | | | | | | | +--Osedax symbiont Rs1 (2) | | | | | | | | | | | +--Oceanobacter sp. HI0075 (4) | | | | | | | | | | | +--Neptuniibacter sp. Phe_28 (1) | | | | | | | | | | | +--Marinobacterium sp. ST58-10 (2) | | | | | | | | | +--Alcanivoracaceae (1) | | | | | | | | | +--Alcanivorax sp. Nap_24 (1) | | | | | | | +--Pseudomonadales (56) | | | | | | | +--unclassifiedPseudomonadales (1) | | | | | | | | | +--Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210 (1) | | | | | | | +--Pseudomonadaceae (55) | | | | | | | +--Pseudomonas sp. G5(2012) (1) | | | | | | | +--Pseudomonas alkylphenolia (1) | | | | | | | +--Pseudomonas fluorescens HK44 (8) | | | | | | | +--Pseudomonas extremaustralis (1) | | | | | | | +--Pseudomonas batumici (1) | | | | | | | +--Pseudomonas sp. GM78 (1) | | | | | | | +--Pseudomonas putida KT2440 (9) | | | | | | | +--Azotobacter vinelandii DJ (8) | | | | | | | +--Pseudomonas putida CSV86 (1) | | | | | | | +--Pseudomonas sp. UK4 (1) | | | | | | | +--Pseudomonas alcaligenes (1) | | | | | | | +--Pseudomonas aeruginosa (1) | | | | | | | +--Pseudomonas putida (1) | | | | | | | +--Pseudomonas syringae pv. tomato str. DC3000 (3) | | | | | | | +--Pseudomonas putida GB-1 (1) | | | | | | | +--Pseudomonas sp. BRH_c35 (1) | | | | | | | +--Pseudomonas (14) | | | | | | | | | +--Pseudomonassyringaegroup (1) | | | | | | | | | | | +--Pseudomonassyringaegroupgenomosp.1 (1) | | | | | | | | | | | +--Pseudomonassyringae (1) | | | | | | | | | | | +--Pseudomonassyringaegrouppathovarsincertaesedis (1) | | | | | | | | | | | +--Pseudomonas syringae pv. actinidiae ICMP 19096 (1) | | | | | | | | | +--Pseudomonas syringae pv. oryzae str. 1_6 (1) | | | | | | | | | +--Pseudomonasfluorescensgroup (2) | | | | | | | | | | | +--Pseudomonas fluorescens ABAC62 (2) | | | | | | | | | +--Pseudomonasaeruginosagroup (10) | | | | | | | | | +--Pseudomonasoleovorans/pseudoalcaligenesgroup (10) | | | | | | | | | +--Pseudomonas pseudoalcaligenes KF707 = NBRC 110670 (10) | | | | | | | +--Pseudomonas sp. 21C1 (1) | | | | | +--Betaproteobacteria (154) | | | | | | | +--Candidatus Accumulibacter phosphatis clade IIA str. UW-1 (6) | | | | | | | +--unclassifiedBetaproteobacteria (19) | | | | | | | | | +--Betaproteobacteria bacterium MOLA814 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 (1) | | | | | | | | | +--Candidatus Accumulibacter sp. BA-91 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 (1) | | | | | | | | | +--Candidatus Accumulibacter sp. BA-93 (1) | | | | | | | | | +--Candidatus Accumulibacter sp. SK-11 (2) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 (4) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 (2) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 (1) | | | | | | | | | +--Candidatus Accumulibacter sp. SK-12 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_19 (1) | | | | | | | +--Burkholderiales (108) | | | | | | | | | +--Alcaligenaceae (8) | | | | | | | | | | | +--Bordetella petrii (1) | | | | | | | | | | | +--Advenella (7) | | | | | | | | | | | +--Advenella mimigardefordensis DPN7 (7) | | | | | | | | | +--Burkholderiaceae (45) | | | | | | | | | | | +--Burkholderia terricola (1) | | | | | | | | | | | +--Burkholderia xenovorans LB400 (3) | | | | | | | | | | | +--Paraburkholderia ginsengiterrae (1) | | | | | | | | | | | +--Burkholderia graminis C4D1M (1) | | | | | | | | | | | +--Burkholderia sp. AD24 (1) | | | | | | | | | | | +--Ralstonia eutropha H16 (1) | | | | | | | | | | | +--Caballeronia udeis (2) | | | | | | | | | | | +--Burkholderia rhizoxinica HKI 454 (1) | | | | | | | | | | | +--Burkholderia (4) | | | | | | | | | | | | | +--Burkholderia cenocepacia MC0-3 (1) | | | | | | | | | | | | | +--Burkholderia ambifaria MEX-5 (1) | | | | | | | | | | | | | +--Burkholderia vietnamiensis G4 (2) | | | | | | | | | | | +--Cupriavidus taiwanensis (1) | | | | | | | | | | | +--Burkholderia ubonensis Bu (1) | | | | | | | | | | | +--Burkholderia sp. BR2004143571 (3) | | | | | | | | | | | +--Candidatus Burkholderia crenata (16) | | | | | | | | | | | +--Burkholderia sp. Leaf177 (1) | | | | | | | | | | | +--Caballeronia calidae (1) | | | | | | | | | | | +--Burkholderia sp. ATSB16 (5) | | | | | | | | | | | +--Burkholderia ubonensis (2) | | | | | | | | | +--Oxalobacteraceae (2) | | | | | | | | | | | +--Massilia sp. LC238 (1) | | | | | | | | | | | +--Duganella sp. Root198D2 (1) | | | | | | | | | +--Sutterellaceae (6) | | | | | | | | | | | +--Sutterella (5) | | | | | | | | | | | | | +--Sutterella sp. CAG:521 (2) | | | | | | | | | | | | | +--Sutterella wadsworthensis 2_1_59BFAA (2) | | | | | | | | | | | | | +--Sutterella wadsworthensis CAG:135 (1) | | | | | | | | | | | +--Parasutterella (1) | | | | | | | | | | | +--Parasutterella excrementihominis CAG:233 (1) | | | | | | | | | +--unclassifiedBurkholderiales (27) | | | | | | | | | | | +--Burkholderiales bacterium 68-12 (2) | | | | | | | | | | | +--BurkholderialesGeneraincertaesedis (1) | | | | | | | | | | | | | +--Rhizobacter sp. Root1221 (1) | | | | | | | | | | | +--Burkholderiales bacterium RIFOXYC12_FULL_65_23 (1) | | | | | | | | | | | +--Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_61_11 (1) | | | | | | | | | | | +--Burkholderiales bacterium YL45 (20) | | | | | | | | | | | +--Burkholderiales bacterium RIFOXYD12_FULL_59_19 (1) | | | | | | | | | | | +--Burkholderiales bacterium 70-64 (1) | | | | | | | | | +--Comamonadaceae (20) | | | | | | | | | +--Acidovorax temperans (1) | | | | | | | | | +--CandidatusSymbiobacter (1) | | | | | | | | | | | +--Candidatus Symbiobacter mobilis CR (1) | | | | | | | | | +--Limnohabitans (1) | | | | | | | | | | | +--Limnohabitans planktonicus II-D5 (1) | | | | | | | | | +--Acidovorax sp. JS42 (2) | | | | | | | | | +--Rhodoferax (3) | | | | | | | | | | | +--Rhodoferax antarcticus ANT.BR (3) | | | | | | | | | +--Polaromonas sp. JS666 (4) | | | | | | | | | +--Hydrogenophaga sp. A37 (1) | | | | | | | | | +--Variovorax paradoxus (2) | | | | | | | | | +--Variovorax sp. HW608 (5) | | | | | | | +--Rhodocyclales (7) | | | | | | | | | +--Rhodocyclaceae (6) | | | | | | | | | | | +--Thauera sp. 27 (1) | | | | | | | | | | | +--Thauera sp. 63 (3) | | | | | | | | | | | +--Candidatus Propionivibrio aalborgensis (1) | | | | | | | | | | | +--Azoarcus sp. KH32C (1) | | | | | | | | | +--Rhodocyclales bacterium RIFCSPLOWO2_02_FULL_63_24 (1) | | | | | | | +--Neisseriales (9) | | | | | | | | | +--Neisseriaceae (9) | | | | | | | | | +--Vitreoscilla filiformis (9) | | | | | | | +--Nitrosomonadales (4) | | | | | | | | | +--Nitrosomonadaceae (3) | | | | | | | | | | | +--Nitrosomonas europaea ATCC 19718 (3) | | | | | | | | | +--Gallionellales bacterium RIFOXYB12_FULL_54_9 (1) | | | | | | | +--Hydrogenophilales (1) | | | | | | | +--Hydrogenophilaceae (1) | | | | | | | +--Thiobacillus sp. SCN 63-374 (1) | | | | | +--Deltaproteobacteria (81) | | | | | | | +--Desulfovibrionales (9) | | | | | | | | | +--Desulfohalobiaceae (9) | | | | | | | | | +--Desulfohalobium retbaense DSM 5692 (9) | | | | | | | +--Desulfuromonadales (41) | | | | | | | | | +--Pelobacteraceae (6) | | | | | | | | | | | +--Pelobacter carbinolicus DSM 2380 (6) | | | | | | | | | +--Geobacteraceae (35) | | | | | | | | | +--Geobacter uraniireducens Rf4 (12) | | | | | | | | | +--Geobacter sp. FRC-32 (2) | | | | | | | | | +--Geobacter sulfurreducens PCA (3) | | | | | | | | | +--Geobacter metallireducens GS-15 (2) | | | | | | | | | +--Geobacter sp. M18 (16) | | | | | | | +--Desulfobacterales (29) | | | | | | | | | +--Desulfobulbaceae (1) | | | | | | | | | | | +--Desulfurivibrio alkaliphilus AHT2 (1) | | | | | | | | | +--Desulfobacteraceae (28) | | | | | | | | | +--Desulfobacula toluolica Tol2 (24) | | | | | | | | | +--Desulfobacter postgatei 2ac9 (4) | | | | | | | +--Syntrophobacterales (2) | | | | | | | +--Syntrophobacteraceae (2) | | | | | | | +--Syntrophobacter fumaroxidans MPOB (2) | | | | | +--delta/epsilonsubdivisions (59) | | | | | | | +--Deltaproteobacteria (59) | | | | | | | +--Myxococcales (1) | | | | | | | | | +--Cystobacterineae (1) | | | | | | | | | +--Vulgatibacteraceae (1) | | | | | | | | | +--Vulgatibacter incomptus (1) | | | | | | | +--Desulfovibrionales (5) | | | | | | | | | +--Desulfovibrionaceae (5) | | | | | | | | | +--Desulfovibrio sp. S3730MH75 (1) | | | | | | | | | +--Desulfovibrio sp. An276 (4) | | | | | | | +--Desulfuromonadales (17) | | | | | | | | | +--Desulfuromonadaceae (15) | | | | | | | | | | | +--Malonomonas (1) | | | | | | | | | | | | | +--Malonomonas rubra DSM 5091 (1) | | | | | | | | | | | +--Desulfuromonas sp. DDH964 (14) | | | | | | | | | +--Geobacteraceae (2) | | | | | | | | | +--Geobacteraceae bacterium GWC2_58_44 (1) | | | | | | | | | +--Geobacteraceae bacterium GWC2_53_11 (1) | | | | | | | +--Desulfobacterales (16) | | | | | | | | | +--Desulfobacterales bacterium GWB2_56_26 (1) | | | | | | | | | +--Desulfobacterales bacterium C00003106 (1) | | | | | | | | | +--Desulfobacterales bacterium S5133MH4 (1) | | | | | | | | | +--Desulfobacterales bacterium PC51MH44 (1) | | | | | | | | | +--Desulfobacteraceae (4) | | | | | | | | | | | +--Desulfotignum (1) | | | | | | | | | | | | | +--Desulfotignum phosphitoxidans DSM 13687 (1) | | | | | | | | | | | +--Desulfococcus (1) | | | | | | | | | | | | | +--Desulfococcus multivorans DSM 2059 (1) | | | | | | | | | | | +--Desulfobacterium (2) | | | | | | | | | | | +--Desulfobacterium vacuolatum DSM 3385 (2) | | | | | | | | | +--Desulfobacterales bacterium S5133MH16 (1) | | | | | | | | | +--Desulfobulbaceae (6) | | | | | | | | | | | +--Desulfobulbaceae bacterium BRH_c16a (2) | | | | | | | | | | | +--Desulfobulbus sp. Tol-SR (1) | | | | | | | | | | | +--Desulfobulbaceae bacterium DB1 (1) | | | | | | | | | | | +--Desulfocapsa (2) | | | | | | | | | | | +--Desulfocapsa sulfexigens DSM 10523 (2) | | | | | | | | | +--Desulfobacterales bacterium C00003104 (1) | | | | | | | +--Syntrophobacterales (7) | | | | | | | | | +--Syntrophobacteraceae (1) | | | | | | | | | | | +--Syntrophobacteraceae bacterium CG2_30_61_12 (1) | | | | | | | | | +--Syntrophobacterales bacterium GWC2_56_13 (1) | | | | | | | | | +--Syntrophobacterales bacterium RIFOXYC2_FULL_60_23 (1) | | | | | | | | | +--Syntrophaceae (4) | | | | | | | | | +--Smithella sp. F21 (1) | | | | | | | | | +--Smithella sp. SDB (1) | | | | | | | | | +--Smithella sp. SCADC (2) | | | | | | | +--unclassifiedDeltaproteobacteria (13) | | | | | | | +--Deltaproteobacteria bacterium CG2_30_66_27 (1) | | | | | | | +--Deltaproteobacteria bacterium RBG_16_48_10 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFOXYD2_FULL_66_9 (1) | | | | | | | +--Deltaproteobacteria bacterium GWC2_65_14 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFOXYD12_FULL_50_9 (2) | | | | | | | +--Deltaproteobacteria bacterium RBG_16_47_11 (2) | | | | | | | +--Dissulfuribacter thermophilus (2) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19 (1) | | | | | | | +--delta proteobacterium ML8_D (1) | | | | | | | +--Deltaproteobacteria bacterium RBG_13_65_10 (1) | | | | | +--Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18 (2) | | | +--unclassifiedBacteria (65) | | | | | +--bacterium CG2_30_54_10 (1) | | | | | +--bacterium F16 (3) | | | | | +--Bacteriacandidatephyla (61) | | | | | +--Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_46_11 (1) | | | | | +--Candidatus Berkelbacteria bacterium RIFOXYA2_FULL_43_10 (1) | | | | | +--candidatedivisionNC10 (2) | | | | | | | +--candidate division NC10 bacterium RIFCSPLOWO2_02_FULL_66_22 (2) | | | | | +--Candidatus Margulisbacteria bacterium GWE2_39_32 (1) | | | | | +--Berkelbacteria bacterium GW2011_GWA2_46_7 (1) | | | | | +--candidate division Kazan bacterium GW2011_GWB1_45_10 (1) | | | | | +--Candidatus Riflebacteria bacterium GWC2_50_8 (1) | | | | | +--Patescibacteriagroup (48) | | | | | | | +--Parcubacteriagroup (34) | | | | | | | | | +--Candidatus Wolfebacteria bacterium RIFCSPLOWO2_01_FULL_47_17b (1) | | | | | | | | | +--Candidatus Vogelbacteria bacterium RIFOXYD2_FULL_44_9 (1) | | | | | | | | | +--Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_02_FULL_50_13 (1) | | | | | | | | | +--Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_42_16 (1) | | | | | | | | | +--Parcubacteria group bacterium GW2011_GWA2_49_16 (1) | | | | | | | | | +--Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_43_15c (1) | | | | | | | | | +--Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_39_14 (1) | | | | | | | | | +--Candidatus Kaiserbacteria bacterium RIFOXYD1_FULL_47_14 (1) | | | | | | | | | +--Candidatus Staskawiczbacteria bacterium RIFOXYA12_FULL_37_10 (1) | | | | | | | | | +--Candidatus Taylorbacteria bacterium RIFCSPLOWO2_12_FULL_44_15c (1) | | | | | | | | | +--Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26 (1) | | | | | | | | | +--Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_50_24 (1) | | | | | | | | | +--Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_46_13 (1) | | | | | | | | | +--Candidatus Uhrbacteria bacterium RIFCSPLOWO2_02_FULL_54_37 (1) | | | | | | | | | +--Candidatus Vogelbacteria bacterium RIFOXYD1_FULL_44_32 (1) | | | | | | | | | +--Candidatus Uhrbacteria bacterium RIFCSPLOWO2_01_FULL_47_24 (1) | | | | | | | | | +--Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_54_11b (1) | | | | | | | | | +--Candidatus Colwellbacteria bacterium RIFCSPLOWO2_12_FULL_44_13 (1) | | | | | | | | | +--Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_38_19 (1) | | | | | | | | | +--Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_02_FULL_57_19 (1) | | | | | | | | | +--Candidatus Ryanbacteria bacterium RIFCSPLOWO2_02_FULL_45_11c (1) | | | | | | | | | +--Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_02_FULL_42_14 (1) | | | | | | | | | +--Parcubacteria group bacterium GW2011_GWA2_53_21 (1) | | | | | | | | | +--Candidatus Nealsonbacteria bacterium RBG_13_42_11 (1) | | | | | | | | | +--Candidatus Falkowbacteria bacterium GW2011_GWA2_39_24 (1) | | | | | | | | | +--Parcubacteria group bacterium GW2011_GWA2_42_14 (1) | | | | | | | | | +--Candidatus Adlerbacteria bacterium RIFCSPLOWO2_01_FULL_54_21b (1) | | | | | | | | | +--Candidatus Buchananbacteria bacterium RIFCSPLOWO2_01_FULL_40_23b (1) | | | | | | | | | +--Parcubacteria group bacterium CG1_02_50_68 (1) | | | | | | | | | +--Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_01_FULL_39_25 (1) | | | | | | | | | +--Parcubacteria group bacterium GW2011_GWB1_42_9 (1) | | | | | | | | | +--Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_12_FULL_53_13 (1) | | | | | | | | | +--Parcubacteria group bacterium CG1_02_40_82 (1) | | | | | | | | | +--Parcubacteria group bacterium CG1_02_37_13 (1) | | | | | | | +--Microgenomatesgroup (14) | | | | | | | +--Microgenomates group bacterium GW2011_GWC1_38_12 (1) | | | | | | | +--Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_38_21 (1) | | | | | | | +--Candidatus Daviesbacteria bacterium GW2011_GWF2_38_6 (1) | | | | | | | +--Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_48_11 (1) | | | | | | | +--Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5 (1) | | | | | | | +--CandidatusMicrogenomates (1) | | | | | | | | | +--Microgenomates bacterium 39_7 (1) | | | | | | | +--Candidatus Levybacteria bacterium CG2_30_37_29 (1) | | | | | | | +--Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_37_33 (1) | | | | | | | +--Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_10 (1) | | | | | | | +--Candidatus Pacebacteria bacterium CG1_02_43_31 (1) | | | | | | | +--Candidatus Collierbacteria bacterium CG1_02_44_10 (1) | | | | | | | +--Candidatus Woesebacteria bacterium GWB1_43_5 (1) | | | | | | | +--Candidatus Collierbacteria bacterium GW2011_GWA2_42_17 (1) | | | | | | | +--Microgenomates group bacterium GW2011_GWB1_45_17 (1) | | | | | +--Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_41_86 (1) | | | | | +--candidatedivisionKSB1 (1) | | | | | | | +--candidate division KSB1 bacterium RBG_16_48_16 (1) | | | | | +--Candidatus Firestonebacteria bacterium RIFOXYC2_FULL_39_67 (1) | | | | | +--candidate division Kazan bacterium RIFCSPLOWO2_01_FULL_48_13 (1) | | | | | +--candidate division WWE3 bacterium GW2011_GWC2_44_9 (1) | | | +--Planctomycetes (3) | | | | | +--Planctomycetacia (3) | | | | | +--Planctomycetales (3) | | | | | +--Planctomycetaceae (3) | | | | | +--Rhodopirellula baltica SH 1 (2) | | | | | +--Blastopirellula marina DSM 3645 (1) | | | +--Spirochaetes (9) | | | | | +--Spirochaetia (4) | | | | | | | +--Spirochaetales (4) | | | | | | | +--Spirochaetaceae (4) | | | | | | | +--Spirochaeta (1) | | | | | | | | | +--Spirochaeta africana DSM 8902 (1) | | | | | | | +--Treponema sp. GWC1_61_84 (2) | | | | | | | +--Marispirochaeta aestuarii (1) | | | | | +--Spirochaetes bacterium GWB1_66_5 (1) | | | | | +--Spirochaetales (1) | | | | | | | +--Spirochaetaceae (1) | | | | | | | +--Spirochaeta sp. Buddy (1) | | | | | +--Spirochaetes bacterium GWC1_61_12 (1) | | | | | +--Spirochaetes bacterium RBG_16_67_19 (1) | | | | | +--Spirochaetes bacterium DG_61 (1) | | | +--Firmicutes (642) | | | | | +--Clostridia (246) | | | | | | | +--Thermoanaerobacterales (32) | | | | | | | | | +--ThermoanaerobacteralesFamilyIII.IncertaeSedis (1) | | | | | | | | | | | +--Thermovenabulum sp. R270 (1) | | | | | | | | | +--Thermoanaerobacteraceae (31) | | | | | | | | | +--Thermoanaerobacter sp. X514 (2) | | | | | | | | | +--Moorellagroup (3) | | | | | | | | | | | +--Ammonifex degensii KC4 (3) | | | | | | | | | +--Fervidicola ferrireducens (4) | | | | | | | | | +--Thermoanaerobacter pseudethanolicus ATCC 33223 (22) | | | | | | | +--Halanaerobiales (4) | | | | | | | | | +--Halanaerobiaceae (4) | | | | | | | | | +--Halanaerobium hydrogeniformans (4) | | | | | | | +--Natranaerobiales (36) | | | | | | | | | +--Natranaerobiaceae (36) | | | | | | | | | +--Natranaerobius trueperi (20) | | | | | | | | | +--Natranaerobius thermophilus JW/NM-WN-LF (16) | | | | | | | +--Clostridiales (174) | | | | | | | +--Blautia hansenii DSM 20583 (1) | | | | | | | +--Heliobacteriaceae (20) | | | | | | | | | +--Heliobacterium modesticaldum Ice1 (20) | | | | | | | +--Peptostreptococcaceae (1) | | | | | | | | | +--Peptostreptococcus stomatis DSM 17678 (1) | | | | | | | +--Eubacteriaceae (15) | | | | | | | | | +--Eubacterium rectale ATCC 33656 (11) | | | | | | | | | +--Acetobacterium wieringae (2) | | | | | | | | | +--Eubacterium uniforme (1) | | | | | | | | | +--Eubacterium sp. AS15b (1) | | | | | | | +--Lachnospiraceae (14) | | | | | | | | | +--Marvinbryantia formatexigens DSM 14469 (2) | | | | | | | | | +--Roseburia hominis A2-183 (1) | | | | | | | | | +--Catonella morbi ATCC 51271 (3) | | | | | | | | | +--Butyrivibrio proteoclasticus B316 (1) | | | | | | | | | +--Clostridium proteoclasticum (1) | | | | | | | | | +--Roseburia intestinalis XB6B4 (1) | | | | | | | | | +--Roseburia inulinivorans DSM 16841 (1) | | | | | | | | | +--Oribacterium sp. ACB1 (3) | | | | | | | | | +--Lachnobacterium bovis (1) | | | | | | | +--ClostridialesFamilyXVIII.IncertaeSedis (30) | | | | | | | | | +--Symbiobacterium thermophilum IAM 14863 (30) | | | | | | | +--Ruminococcaceae (3) | | | | | | | | | +--Bacteroides cellulosolvens ATCC 35603 (1) | | | | | | | | | +--Acetivibrio ethanolgignens (1) | | | | | | | | | +--Ruminococcus torques L2-14 (1) | | | | | | | +--ClostridialesFamilyXI.IncertaeSedis (4) | | | | | | | | | +--Anaerococcus lactolyticus ATCC 51172 (1) | | | | | | | | | +--Anaerococcus tetradius ATCC 35098 (1) | | | | | | | | | +--Finegoldia magna BVS033A4 (1) | | | | | | | | | +--Peptoniphilus duerdenii ATCC BAA-1640 (1) | | | | | | | +--Lachnospiraceae bacterium 3_1_57FAA_CT1 (1) | | | | | | | +--Lachnospiraceae bacterium A2 (1) | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (2) | | | | | | | | | +--Mogibacterium sp. CM50 (1) | | | | | | | | | +--Mogibacterium pumilum (1) | | | | | | | +--Clostridiaceae (52) | | | | | | | | | +--Thermotalea metallivorans (2) | | | | | | | | | +--Clostridium saccharolyticum WM1 (1) | | | | | | | | | +--Clostridium pasteurianum BC1 (1) | | | | | | | | | +--Clostridium tetani E88 (2) | | | | | | | | | +--Clostridium thermoalcaliphilum (1) | | | | | | | | | +--Clostridium estertheticum subsp. estertheticum (2) | | | | | | | | | +--Clostridium asparagiforme DSM 15981 (4) | | | | | | | | | +--Clostridium sp. 232.1 (1) | | | | | | | | | +--Clostridium acetobutylicum ATCC 824 (2) | | | | | | | | | +--Clostridium bolteae ATCC BAA-613 (2) | | | | | | | | | +--Clostridium hungatei (1) | | | | | | | | | +--Clostridium sp. DL-VIII (1) | | | | | | | | | +--Clostridium botulinum B1 str. Okra (1) | | | | | | | | | +--Clostridium paraputrificum (1) | | | | | | | | | +--Clostridium puniceum (3) | | | | | | | | | +--Clostridium sp. 7_2_43FAA (2) | | | | | | | | | +--Clostridium sp. SY8519 (2) | | | | | | | | | +--Clostridium hathewayi DSM 13479 (1) | | | | | | | | | +--Clostridium halophilum (1) | | | | | | | | | +--Clostridium saccharoperbutylacetonicum ATCC 27021 (5) | | | | | | | | | +--Clostridium roseum (3) | | | | | | | | | +--Clostridium symbiosum WAL-14163 (11) | | | | | | | | | +--Caloramator mitchellensis (1) | | | | | | | | | +--Clostridium sulfidigenes (1) | | | | | | | +--Lachnospiraceae bacterium 3-1 (2) | | | | | | | +--Syntrophomonadaceae (4) | | | | | | | | | +--Dethiobacter alkaliphilus AHT 1 (1) | | | | | | | | | +--Syntrophomonas wolfei subsp. wolfei str. Goettingen (3) | | | | | | | +--Peptococcaceae (21) | | | | | | | | | +--Thermincola potens JR (1) | | | | | | | | | +--Desulfotomaculum kuznetsovii DSM 6115 (2) | | | | | | | | | +--Syntrophobotulus glycolicus DSM 8271 (1) | | | | | | | | | +--Desulfitobacterium hafniense DCB-2 (1) | | | | | | | | | +--Desulfosporosinus orientis DSM 765 (3) | | | | | | | | | +--Desulfitobacterium hafniense Y51 (5) | | | | | | | | | +--Desulfotomaculum gibsoniae DSM 7213 (1) | | | | | | | | | +--Desulfosporosinus youngiae DSM 17734 (2) | | | | | | | | | +--Desulfitobacterium metallireducens DSM 15288 (4) | | | | | | | | | +--Desulfosporosinus sp. OT (1) | | | | | | | +--ClostridialesFamilyXVII.IncertaeSedis (2) | | | | | | | | | +--Sulfobacillus acidophilus TPY (2) | | | | | | | +--Lachnospiraceae bacterium 5_1_57FAA (1) | | | | | +--Lactobacillales (85) | | | | | | | +--Carnobacteriaceae (17) | | | | | | | | | +--Carnobacterium sp. LMG 26642 (8) | | | | | | | | | +--Trichococcus sp. R210 (9) | | | | | | | +--Streptococcaceae (12) | | | | | | | | | +--Streptococcus pneumoniae (1) | | | | | | | | | +--Streptococcus pneumoniae TIGR4 (1) | | | | | | | | | +--Streptococcus gallolyticus (4) | | | | | | | | | +--Streptococcus pneumoniae R6 (2) | | | | | | | | | +--Streptococcus agalactiae 2603V/R (1) | | | | | | | | | +--Streptococcus uberis (1) | | | | | | | | | +--Streptococcus pneumoniae 70585 (1) | | | | | | | | | +--Streptococcus pyogenes MGAS10750 (1) | | | | | | | +--Enterococcaceae (22) | | | | | | | | | +--Tetragenococcus halophilus NBRC 12172 (20) | | | | | | | | | +--Enterococcus aquimarinus (1) | | | | | | | | | +--Enterococcus sp. HAMBI 3055 (1) | | | | | | | +--Lactobacillaceae (31) | | | | | | | | | +--Lactobacillus pobuzihii (2) | | | | | | | | | +--Lactobacillus plantarum WCFS1 (2) | | | | | | | | | +--Lactobacillus vaginalis ATCC 49540 (2) | | | | | | | | | +--Lactobacillus acidipiscis (2) | | | | | | | | | +--Lactobacillus crispatus JV-V01 (1) | | | | | | | | | +--Lactobacillus salivarius UCC118 (1) | | | | | | | | | +--Lactobacillus reuteri DSM 20016 (12) | | | | | | | | | +--Lactobacillus ingluviei (2) | | | | | | | | | +--Lactobacillus reuteri JCM 1112 (2) | | | | | | | | | +--Lactobacillus brevis ATCC 367 (1) | | | | | | | | | +--Lactobacillus casei ATCC 334 (2) | | | | | | | | | +--Lactobacillus oris PB013-T2-3 (1) | | | | | | | | | +--Lactobacillus helveticus DPC 4571 (1) | | | | | | | +--Aerococcaceae (3) | | | | | | | +--Abiotrophia defectiva ATCC 49176 (3) | | | | | +--Negativicutes (15) | | | | | | | +--Selenomonadales (15) | | | | | | | +--Acidaminococcaceae (2) | | | | | | | | | +--Acidaminococcus sp. D21 (1) | | | | | | | | | +--Acidaminococcus intestini RyC-MR95 (1) | | | | | | | +--Veillonellaceae (13) | | | | | | | +--Anaerovibrio lipolyticus (1) | | | | | | | +--Dialister micraerophilus DSM 19965 (1) | | | | | | | +--Sporomusa malonica (1) | | | | | | | +--Thermosinus carboxydivorans Nor1 (3) | | | | | | | +--Selenomonas sputigena ATCC 35185 (2) | | | | | | | +--Megasphaera elsdenii DSM 20460 (5) | | | | | +--Bacillales (269) | | | | | | | +--Staphylococcus simiae CCM 7213 (1) | | | | | | | +--Bacillus tusciae DSM 2912 (1) | | | | | | | +--Planococcaceae (7) | | | | | | | | | +--Sporosarcina psychrophila (2) | | | | | | | | | +--Planomicrobium glaciei (3) | | | | | | | | | +--Sporosarcina newyorkensis 2681 (2) | | | | | | | +--Alicyclobacillaceae (7) | | | | | | | | | +--Alicyclobacillus macrosporangiidus (3) | | | | | | | | | +--Alicyclobacillus ferrooxydans (4) | | | | | | | +--Paenibacillaceae (40) | | | | | | | | | +--Thermobacillus composti KWC4 (11) | | | | | | | | | +--Paenibacillus naphthalenovorans (1) | | | | | | | | | +--Brevibacillus sp. WF146 (1) | | | | | | | | | +--Paenibacillus stellifer (8) | | | | | | | | | +--Paenibacillus pectinilyticus (1) | | | | | | | | | +--Paenibacillus riograndensis SBR5 (1) | | | | | | | | | +--Paenibacillus macerans (4) | | | | | | | | | +--Brevibacillus brevis NBRC 100599 (7) | | | | | | | | | +--Paenibacillus larvae subsp. larvae BRL-230010 (1) | | | | | | | | | +--Paenibacillus wynnii (1) | | | | | | | | | +--Paenibacillus sp. oral taxon 786 str. D14 (4) | | | | | | | +--Bacillaceae (202) | | | | | | | | | +--Oceanobacillus iheyensis HTE831 (10) | | | | | | | | | +--Bacillus pseudalcaliphilus (2) | | | | | | | | | +--Bacillus shackletonii (18) | | | | | | | | | +--Geobacillus kaustophilus HTA426 (3) | | | | | | | | | +--Virgibacillus pantothenticus (3) | | | | | | | | | +--Bacillus sporothermodurans (1) | | | | | | | | | +--Bacillus krulwichiae (3) | | | | | | | | | +--Bacillus coahuilensis m4-4 (1) | | | | | | | | | +--Bacillus arseniciselenatis (1) | | | | | | | | | +--Bacillus thermozeamaize (3) | | | | | | | | | +--Bacillus horikoshii (1) | | | | | | | | | +--Bacillus coagulans 36D1 (5) | | | | | | | | | +--Geobacillus sp. WCH70 (4) | | | | | | | | | +--Bacillus galactosidilyticus (2) | | | | | | | | | +--Bacillus pseudofirmus OF4 (2) | | | | | | | | | +--Bacillus vietnamensis (1) | | | | | | | | | +--Bacillus thermoamylovorans (1) | | | | | | | | | +--Bacillus macroides (1) | | | | | | | | | +--Virgibacillus sp. CC-YMP-6 (1) | | | | | | | | | +--Bacillus methanolicus MGA3 (15) | | | | | | | | | +--Virgibacillus chiguensis (1) | | | | | | | | | +--Bacillus smithii (51) | | | | | | | | | +--Oceanobacillus oncorhynchi (7) | | | | | | | | | +--Bacillus arsenicus (1) | | | | | | | | | +--Aeribacillus pallidus (2) | | | | | | | | | +--Bacillus subterraneus (1) | | | | | | | | | +--Geobacillus sp. Y412MC61 (2) | | | | | | | | | +--Salimicrobium sp. ISL-25 (1) | | | | | | | | | +--Bacillus sp. NRRL B-14911 (1) | | | | | | | | | +--Bacillus ginsengihumi (1) | | | | | | | | | +--Geobacillus sp. Y412MC52 (1) | | | | | | | | | +--Bacillus cellulosilyticus DSM 2522 (1) | | | | | | | | | +--Bacillus circulans (3) | | | | | | | | | +--Ornithinibacillus sp. G8B(2010) (1) | | | | | | | | | +--Bacillus halodurans C-125 (7) | | | | | | | | | +--Bacillus sp. NIOC16 (1) | | | | | | | | | +--Bacillus halmapalus (1) | | | | | | | | | +--Bacillus (3) | | | | | | | | | | | +--Bacillus thuringiensis serovar pakistani str. T13001 (1) | | | | | | | | | | | +--Bacillus cytotoxicus NVH 391-98 (2) | | | | | | | | | +--Geobacillus debilis (5) | | | | | | | | | +--Bacillus selenitireducens MLS10 (10) | | | | | | | | | +--Anoxybacillus flavithermus (2) | | | | | | | | | +--Bacillus sp. 2_A_57_CT2 (10) | | | | | | | | | +--Anoxybacillus amylolyticus (7) | | | | | | | | | +--Anoxybacillus flavithermus WK1 (2) | | | | | | | | | +--Virgibacillus necropolis (2) | | | | | | | +--Staphylococcus pseudintermedius (7) | | | | | | | +--Sporolactobacillaceae (1) | | | | | | | | | +--Sporolactobacillus inulinus CASD (1) | | | | | | | +--Staphylococcus microti (3) | | | | | +--Erysipelotrichi (27) | | | | | +--Erysipelotrichales (27) | | | | | +--Erysipelotrichaceae (1) | | | | | | | +--Solobacterium moorei F0204 (1) | | | | | +--Eubacterium biforme DSM 3989 (1) | | | | | +--Clostridium spiroforme DSM 1552 (24) | | | | | +--Erysipelotrichaceae bacterium 3_1_53 (1) | | | +--Synergistetes (6) | | | | | +--Synergistia (6) | | | | | +--Synergistales (6) | | | | | +--Synergistaceae (6) | | | | | +--Synergistes sp. 3_1_syn1 (1) | | | | | +--Cloacibacillus (5) | | | | | +--Cloacibacillus evryensis DSM 19522 (5) | | | +--Balneolaeota (1) | | | | | +--Balneolia (1) | | | | | +--Balneolales (1) | | | | | +--Balneolaceae (1) | | | | | +--Aliifodinibius roseus (1) | | | +--uncultured bacterium AD12-E7 (1) | | | +--Nitrospinae/Tectomicrobiagroup (6) | | | | | +--Nitrospinae (3) | | | | | | | +--Nitrospinia (3) | | | | | | | +--Nitrospinales (3) | | | | | | | +--Nitrospinaceae (3) | | | | | | | +--Nitrospina sp. SCGC_AAA799_A02 (1) | | | | | | | +--Nitrospina sp. SCGC_AAA799_C22 (2) | | | | | +--CandidatusTectomicrobia (3) | | | | | +--Candidatus Entotheonella sp. TSY2 (2) | | | | | +--Candidatus Entotheonella sp. TSY1 (1) | | | +--Terrabacteriagroup (529) | | | | | +--Actinobacteria (14) | | | | | | | +--Actinobacteria (12) | | | | | | | | | +--Streptomycetales (1) | | | | | | | | | | | +--Streptomycetaceae (1) | | | | | | | | | | | +--Streptomyces (1) | | | | | | | | | | | +--Streptomyces natalensis ATCC 27448 (1) | | | | | | | | | +--unclassifiedActinobacteria(class) (1) | | | | | | | | | | | +--Actinobacteria bacterium OK006 (1) | | | | | | | | | +--Corynebacteriales (2) | | | | | | | | | | | +--Corynebacteriaceae (1) | | | | | | | | | | | | | +--Corynebacterium (1) | | | | | | | | | | | | | +--Corynebacterium freneyi DNF00450 (1) | | | | | | | | | | | +--Gordoniaceae (1) | | | | | | | | | | | +--Gordonia (1) | | | | | | | | | | | +--Gordonia hirsuta DSM 44140 = NBRC 16056 (1) | | | | | | | | | +--Micrococcales (8) | | | | | | | | | +--Micrococcaceae (8) | | | | | | | | | +--Arthrobacter sp. 7749 (1) | | | | | | | | | +--Arthrobacter sp. UCD-GKA (1) | | | | | | | | | +--Glutamicibacter (3) | | | | | | | | | | | +--Glutamicibacter arilaitensis Re117 (3) | | | | | | | | | +--Paeniglutamicibacter (1) | | | | | | | | | | | +--Paeniglutamicibacter gangotriensis Lz1y (1) | | | | | | | | | +--Arthrobacter (1) | | | | | | | | | | | +--Arthrobacter crystallopoietes BAB-32 (1) | | | | | | | | | +--Enteractinococcus helveticum (1) | | | | | | | +--Actinobacteria bacterium RBG_13_35_12 (1) | | | | | | | +--Actinobacteria bacterium CG2_30_50_142 (1) | | | | | +--Cyanobacteria/Melainabacteriagroup (3) | | | | | | | +--Cyanobacteria (3) | | | | | | | +--Synechococcales (3) | | | | | | | +--Leptolyngbyaceae (3) | | | | | | | +--Halomicronema (1) | | | | | | | | | +--Halomicronema hongdechloris C2206 (1) | | | | | | | +--Leptolyngbya sp. 'hensonii' (2) | | | | | +--Chloroflexi (1) | | | | | | | +--unclassifiedChloroflexi (1) | | | | | | | +--Chloroflexi bacterium 13_1_20CM_54_36 (1) | | | | | +--Firmicutes (511) | | | | | +--Firmicutes bacterium CAG:536 (1) | | | | | +--Limnochordia (1) | | | | | | | +--Limnochordales (1) | | | | | | | +--Limnochordaceae (1) | | | | | | | +--Limnochorda pilosa (1) | | | | | +--Firmicutes bacterium CAG:272 (1) | | | | | +--Erysipelotrichia (26) | | | | | | | +--Erysipelotrichales (26) | | | | | | | +--Erysipelotrichaceae (26) | | | | | | | +--Turicibacter sp. H121 (1) | | | | | | | +--Faecalibaculum rodentium (19) | | | | | | | +--Candidatus Stoquefichus sp. KLE1796 (1) | | | | | | | +--unclassifiedErysipelotrichaceae (2) | | | | | | | | | +--Erysipelotrichaceae bacterium NYU-BL-F16 (1) | | | | | | | | | +--Erysipelotrichaceae bacterium MTC7 (1) | | | | | | | +--Coprobacillus (1) | | | | | | | | | +--Coprobacillus sp. CAG:183 (1) | | | | | | | +--Erysipelothrix larvae (1) | | | | | | | +--Catenibacterium (1) | | | | | | | +--Catenibacterium sp. CAG:290 (1) | | | | | +--Clostridia (180) | | | | | | | +--Thermoanaerobacterales (20) | | | | | | | | | +--ThermoanaerobacteralesFamilyIII.IncertaeSedis (2) | | | | | | | | | | | +--Thermoanaerobacterium (2) | | | | | | | | | | | +--Thermoanaerobacterium saccharolyticum JW/SL-YS485 (2) | | | | | | | | | +--Thermoanaerobacteraceae (18) | | | | | | | | | +--Thermanaeromonas (6) | | | | | | | | | | | +--Thermanaeromonas toyohensis ToBE (6) | | | | | | | | | +--Thermacetogenium (12) | | | | | | | | | +--Thermacetogenium phaeum DSM 12270 (12) | | | | | | | +--Clostridiales (160) | | | | | | | +--Ruminococcaceae (5) | | | | | | | | | +--Ruminiclostridium (1) | | | | | | | | | | | +--[Clostridium] straminisolvens JCM 21531 (1) | | | | | | | | | +--Ruminococcus sp. DSM 100440 (2) | | | | | | | | | +--Faecalibacterium (1) | | | | | | | | | | | +--Faecalibacterium sp. CAG:74 (1) | | | | | | | | | +--Ruminococcaceae bacterium (1) | | | | | | | +--Peptostreptococcaceae (6) | | | | | | | | | +--Peptoclostridium (5) | | | | | | | | | | | +--Peptoclostridium acidaminophilum DSM 3953 (5) | | | | | | | | | +--unclassifiedPeptostreptococcaceae (1) | | | | | | | | | +--Peptostreptococcaceae bacterium oral taxon 113 str. W5053 (1) | | | | | | | +--Eubacteriaceae (11) | | | | | | | | | +--Eubacteriaceae bacterium CHKCI004 (1) | | | | | | | | | +--Eubacterium sp. 68-3-10 (6) | | | | | | | | | +--Eubacterium (2) | | | | | | | | | | | +--Eubacterium plexicaudatum ASF492 (1) | | | | | | | | | | | +--Eubacterium dolichum CAG:375 (1) | | | | | | | | | +--Eubacterium sp. 3_1_31 (1) | | | | | | | | | +--Eubacterium sp. An11 (1) | | | | | | | +--Clostridiaceae (43) | | | | | | | | | +--Clostridium sp. BL8 (1) | | | | | | | | | +--Clostridium (18) | | | | | | | | | | | +--Clostridium clostridioforme CAG:132 (3) | | | | | | | | | | | +--Clostridium collagenovorans DSM 3089 (2) | | | | | | | | | | | +--Clostridium bolteae CAG:59 (1) | | | | | | | | | | | +--Clostridium tetanomorphum DSM 665 (9) | | | | | | | | | | | +--Clostridium sp. CAG:921 (1) | | | | | | | | | | | +--Clostridium argentinense CDC 2741 (2) | | | | | | | | | +--Caldisalinibacter kiritimatiensis (1) | | | | | | | | | +--Lactonifactor (1) | | | | | | | | | | | +--Lactonifactor longoviformis DSM 17459 (1) | | | | | | | | | +--Thermobrachium (1) | | | | | | | | | | | +--Thermobrachium celere DSM 8682 (1) | | | | | | | | | +--Caloramator quimbayensis (3) | | | | | | | | | +--Clostridium amylolyticum (1) | | | | | | | | | +--Fervidicella (2) | | | | | | | | | | | +--Fervidicella metallireducens AeB (2) | | | | | | | | | +--Geosporobacter (3) | | | | | | | | | | | +--Geosporobacter subterraneus DSM 17957 (3) | | | | | | | | | +--Clostridium sp. Maddingley MBC34-26 (1) | | | | | | | | | +--Clostridium oryzae (1) | | | | | | | | | +--Clostridium sp. HMP27 (1) | | | | | | | | | +--Lutispora (3) | | | | | | | | | | | +--Lutispora thermophila DSM 19022 (3) | | | | | | | | | +--Clostridium sp. KLE 1755 (1) | | | | | | | | | +--Caloranaerobacter (5) | | | | | | | | | +--Caloranaerobacter azorensis H53214 (5) | | | | | | | +--Lachnospiraceae (49) | | | | | | | | | +--Blautia sp. An249 (1) | | | | | | | | | +--Roseburia sp. 499 (3) | | | | | | | | | +--Blautia sp. YL58 (5) | | | | | | | | | +--Lachnoclostridium sp. An131 (1) | | | | | | | | | +--Lachnobacterium (1) | | | | | | | | | | | +--Lachnobacterium bovis DSM 14045 (1) | | | | | | | | | +--Anaerocolumna (2) | | | | | | | | | | | +--Anaerocolumna jejuensis DSM 15929 (2) | | | | | | | | | +--Pseudobutyrivibrio (2) | | | | | | | | | | | +--Pseudobutyrivibrio xylanivorans DSM 14809 (2) | | | | | | | | | +--Roseburia (1) | | | | | | | | | | | +--Roseburia sp. CAG:50 (1) | | | | | | | | | +--Lachnospiraceae bacterium 3-2 (1) | | | | | | | | | +--Lachnospiraceae bacterium TWA4 (1) | | | | | | | | | +--Anaerosporobacter (2) | | | | | | | | | | | +--Anaerosporobacter mobilis DSM 15930 (2) | | | | | | | | | +--Parasporobacterium (3) | | | | | | | | | | | +--Parasporobacterium paucivorans DSM 15970 (3) | | | | | | | | | +--Anaerostipes sp. 992a (17) | | | | | | | | | +--Lachnoclostridium sp. An14 (2) | | | | | | | | | +--Roseburia sp. 831b (4) | | | | | | | | | +--Robinsoniella sp. RHS (1) | | | | | | | | | +--Lachnoclostridium sp. YL32 (2) | | | | | | | +--Clostridialesincertaesedis (4) | | | | | | | | | +--ClostridialesFamilyXVI.IncertaeSedis (2) | | | | | | | | | | | +--Carboxydocella (2) | | | | | | | | | | | +--Carboxydocella sporoproducens DSM 16521 (2) | | | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (2) | | | | | | | | | +--Eubacterium nodatum ATCC 33099 (2) | | | | | | | +--Peptococcaceae (33) | | | | | | | | | +--Desulfotomaculum sp. 46_80 (1) | | | | | | | | | +--Desulfitobacterium (3) | | | | | | | | | | | +--Desulfitobacterium dichloroeliminans LMG P-21439 (3) | | | | | | | | | +--Desulfotomaculum (3) | | | | | | | | | | | +--Desulfotomaculum hydrothermale Lam5 = DSM 18033 (1) | | | | | | | | | | | +--Desulfotomaculum australicum DSM 11792 (1) | | | | | | | | | | | +--Desulfotomaculum aeronauticum DSM 10349 (1) | | | | | | | | | +--Dehalobacter sp. CF (5) | | | | | | | | | +--Desulfosporosinus sp. OL (3) | | | | | | | | | +--Desulfosporosinus sp. BRH_c37 (1) | | | | | | | | | +--Peptococcaceae bacterium BRH_c8a (4) | | | | | | | | | +--Desulfotomaculum ferrireducens (13) | | | | | | | +--unclassifiedClostridiales (8) | | | | | | | | | +--Clostridiales bacterium 42_27 (1) | | | | | | | | | +--Clostridiales bacterium 45_37 (1) | | | | | | | | | +--Clostridiales bacterium 41_12_two_minus (1) | | | | | | | | | +--Clostridiales bacterium 36_14 (2) | | | | | | | | | +--Clostridiales bacterium KLE1615 (1) | | | | | | | | | +--Clostridiales bacterium 38-18 (1) | | | | | | | | | +--Clostridiales bacterium GWB2_37_7 (1) | | | | | | | +--Gracilibacteraceae (1) | | | | | | | +--Gracilibacter sp. BRH_c7a (1) | | | | | +--Bacilli (279) | | | | | | | +--Lactobacillales (62) | | | | | | | | | +--Streptococcaceae (8) | | | | | | | | | | | +--Streptococcus (4) | | | | | | | | | | | | | +--Streptococcusdysgalactiaegroup (1) | | | | | | | | | | | | | | | +--Streptococcusdysgalactiae (1) | | | | | | | | | | | | | | | +--Streptococcus dysgalactiae subsp. equisimilis RE378 (1) | | | | | | | | | | | | | +--Streptococcus agalactiae LMG 14747 (2) | | | | | | | | | | | | | +--Streptococcus pneumoniae 2070335 (1) | | | | | | | | | | | +--Streptococcus varani (4) | | | | | | | | | +--Carnobacteriaceae (18) | | | | | | | | | | | +--Marinilactibacillus sp. 15R (3) | | | | | | | | | | | +--Carnobacterium (1) | | | | | | | | | | | | | +--Carnobacterium inhibens subsp. gilichinskyi (1) | | | | | | | | | | | +--Dolosigranulum (2) | | | | | | | | | | | | | +--Dolosigranulum pigrum ATCC 51524 (2) | | | | | | | | | | | +--Alloiococcus (9) | | | | | | | | | | | | | +--Alloiococcus otitis ATCC 51267 (9) | | | | | | | | | | | +--Carnobacterium sp. CP1 (3) | | | | | | | | | +--Enterococcaceae (17) | | | | | | | | | | | +--Enterococcus (10) | | | | | | | | | | | | | +--Enterococcus dispar ATCC 51266 (1) | | | | | | | | | | | | | +--Enterococcus cecorum DSM 20682 = ATCC 43198 (2) | | | | | | | | | | | | | +--Enterococcus avium ATCC 14025 (6) | | | | | | | | | | | | | +--Enterococcus columbae DSM 7374 = ATCC 51263 (1) | | | | | | | | | | | +--Tetragenococcus (3) | | | | | | | | | | | | | +--Tetragenococcus muriaticus 3MR10-3 (3) | | | | | | | | | | | +--Enterococcus sp. 10A9_DIV0425 (4) | | | | | | | | | +--Lactobacillaceae (17) | | | | | | | | | | | +--Lactobacillus (17) | | | | | | | | | | | +--Lactobacillus collinoides DSM 20515 = JCM 1123 (1) | | | | | | | | | | | +--Lactobacillus ghanensis DSM 18630 (1) | | | | | | | | | | | +--Lactobacillus frumenti DSM 13145 (2) | | | | | | | | | | | +--Lactobacillus shenzhenensis LY-73 (1) | | | | | | | | | | | +--Lactobacillus manihotivorans DSM 13343 = JCM 12514 (1) | | | | | | | | | | | +--Lactobacillus mucosae LM1 (2) | | | | | | | | | | | +--Lactobacillus similis DSM 23365 = JCM 2765 (1) | | | | | | | | | | | +--Lactobacillus saniviri JCM 17471 = DSM 24301 (1) | | | | | | | | | | | +--Lactobacillus coleohominis DSM 14060 (1) | | | | | | | | | | | +--Lactobacillus vini DSM 20605 (2) | | | | | | | | | | | +--Lactobacillus composti DSM 18527 = JCM 14202 (3) | | | | | | | | | | | +--Lactobacillus farraginis DSM 18382 = JCM 14108 (1) | | | | | | | | | +--Aerococcaceae (2) | | | | | | | | | +--Globicatella sp. HMSC072A10 (2) | | | | | | | +--Bacillales (215) | | | | | | | | | +--Staphylococcaceae (1) | | | | | | | | | | | +--Staphylococcus sp. HGB0015 (1) | | | | | | | | | +--Alicyclobacillaceae (9) | | | | | | | | | | | +--Alicyclobacillus (2) | | | | | | | | | | | | | +--Alicyclobacillus hesperidum URH17-3-68 (1) | | | | | | | | | | | | | +--Alicyclobacillus acidoterrestris ATCC 49025 (1) | | | | | | | | | | | +--Alicyclobacillus sp. USBA-503 (5) | | | | | | | | | | | +--Tumebacillus flagellatus (2) | | | | | | | | | +--Planococcaceae (2) | | | | | | | | | | | +--Sporosarcina sp. P33 (1) | | | | | | | | | | | +--Bhargavaea (1) | | | | | | | | | | | +--Bhargavaea cecembensis DSE10 (1) | | | | | | | | | +--Paenibacillaceae (69) | | | | | | | | | | | +--Paenibacillaceae bacterium GAS479 (1) | | | | | | | | | | | +--Paenibacillus sp. Leaf72 (1) | | | | | | | | | | | +--Paenibacillus oryzae (1) | | | | | | | | | | | +--Paenibacillus sp. IHBB 10380 (1) | | | | | | | | | | | +--Paenibacillus sp. FSL R5-0912 (1) | | | | | | | | | | | +--Paenibacillus yonginensis (22) | | | | | | | | | | | +--Paenibacillus sp. TCA20 (1) | | | | | | | | | | | +--Paenibacillus aquistagni (1) | | | | | | | | | | | +--Paenibacillus sp. FSL H7-0331 (2) | | | | | | | | | | | +--Paenibacillus sp. Soil787 (1) | | | | | | | | | | | +--Paenibacillus sp. Soil522 (2) | | | | | | | | | | | +--Paenibacillus swuensis (2) | | | | | | | | | | | +--Paenibacillus sp. 32O-W (4) | | | | | | | | | | | +--Paenibacillus sp. VKM B-2647 (1) | | | | | | | | | | | +--Paenibacillus (2) | | | | | | | | | | | | | +--Paenibacillus mucilaginosus 3016 (1) | | | | | | | | | | | | | +--Paenibacillus uliginis N3/975 (1) | | | | | | | | | | | +--Paenibacillus sp. FSL H8-0548 (3) | | | | | | | | | | | +--Paenibacillus sp. UNCCL117 (1) | | | | | | | | | | | +--Paenibacillus sp. DMB20 (2) | | | | | | | | | | | +--Paenibacillus tyrfis (1) | | | | | | | | | | | +--Aneurinibacillusgroup (2) | | | | | | | | | | | | | +--Aneurinibacillus sp. XH2 (2) | | | | | | | | | | | +--Brevibacillus (17) | | | | | | | | | | | +--Brevibacillus panacihumi W25 (17) | | | | | | | | | +--Bacillaceae (121) | | | | | | | | | | | +--Bacillus sp. LL01 (2) | | | | | | | | | | | +--Bacillus sp. X1(2014) (49) | | | | | | | | | | | +--Salimicrobium jeotgali (2) | | | | | | | | | | | +--Bacillus sp. SGD-V-76 (1) | | | | | | | | | | | +--Virgibacillus sp. LM2416 (3) | | | | | | | | | | | +--Bacillus sp. OV166 (1) | | | | | | | | | | | +--Halobacillus sp. BBL2006 (1) | | | | | | | | | | | +--Bacillus sp. FJAT-27916 (6) | | | | | | | | | | | +--Fictibacillus (1) | | | | | | | | | | | | | +--Fictibacillus macauensis ZFHKF-1 (1) | | | | | | | | | | | +--Bacillus sp. FJAT-27997 (2) | | | | | | | | | | | +--Anaerobacillus sp. NB2006 (3) | | | | | | | | | | | +--Bacillus sp. CHD6a (1) | | | | | | | | | | | +--Bacillus sp. TS-2 (2) | | | | | | | | | | | +--Amphibacillus (2) | | | | | | | | | | | | | +--Amphibacillus xylanus NBRC 15112 (2) | | | | | | | | | | | +--Bacillus sp. VT-16-64 (3) | | | | | | | | | | | +--Anoxybacillus sp. BCO1 (1) | | | | | | | | | | | +--Paraliobacillus sp. PM-2 (2) | | | | | | | | | | | +--Bacillus sp. FJAT-22058 (1) | | | | | | | | | | | +--Bacillus sp. MUM 13 (3) | | | | | | | | | | | +--Quasibacillus thermotolerans (5) | | | | | | | | | | | +--Lysinibacillus (9) | | | | | | | | | | | | | +--Lysinibacillus manganicus DSM 26584 (2) | | | | | | | | | | | | | +--Lysinibacillus sinduriensis BLB-1 = JCM 15800 (1) | | | | | | | | | | | | | +--Lysinibacillus sphaericus OT4b.31 (3) | | | | | | | | | | | | | +--Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 (3) | | | | | | | | | | | +--Bacillus (6) | | | | | | | | | | | | | +--Bacillus infantis NRRL B-14911 (1) | | | | | | | | | | | | | +--Bacillus coahuilensis p1.1.43 (1) | | | | | | | | | | | | | +--Bacillus akibai JCM 9157 (1) | | | | | | | | | | | | | +--Bacillus azotoformans LMG 9581 (1) | | | | | | | | | | | | | +--Bacillus wakoensis JCM 9140 (2) | | | | | | | | | | | +--Bacillus sp. FJAT-26390 (1) | | | | | | | | | | | +--Bacillus enclensis (1) | | | | | | | | | | | +--Pontibacillus (1) | | | | | | | | | | | | | +--Pontibacillus litoralis JSM 072002 (1) | | | | | | | | | | | +--Bacillus sp. SA1-12 (11) | | | | | | | | | | | +--Gracilibacillus (1) | | | | | | | | | | | +--Gracilibacillus halophilus YIM-C55.5 (1) | | | | | | | | | +--unclassifiedBacillales (1) | | | | | | | | | | | +--Acidibacillus ferrooxidans (1) | | | | | | | | | +--Thermoactinomycetaceae (12) | | | | | | | | | +--Novibacillus thermophilus (9) | | | | | | | | | +--Thermoactinomyces sp. DSM 45891 (3) | | | | | | | +--unclassifiedBacilli (2) | | | | | | | +--Bacilli bacterium VT-13-104 (2) | | | | | +--Firmicutes bacterium CAG:137 (1) | | | | | +--Negativicutes (14) | | | | | | | +--Selenomonadales (11) | | | | | | | | | +--Sporomusaceae (11) | | | | | | | | | +--Anaerosporomusa subterranea (1) | | | | | | | | | +--Pelosinus (3) | | | | | | | | | | | +--Pelosinus fermentans B4 (3) | | | | | | | | | +--Sporomusa (7) | | | | | | | | | +--Sporomusa sphaeroides DSM 2875 (7) | | | | | | | +--Veillonellales (3) | | | | | | | +--Veillonellaceae (3) | | | | | | | +--Dialister (3) | | | | | | | +--Dialister succinatiphilus YIT 11850 (3) | | | | | +--Firmicutes bacterium CAG:129 (1) | | | | | +--Tissierellia (6) | | | | | | | +--Tissierellales (4) | | | | | | | | | +--Tissierellaceae (1) | | | | | | | | | | | +--Tissierella (1) | | | | | | | | | | | +--Tissierella praeacuta DSM 18095 (1) | | | | | | | | | +--Peptoniphilaceae (3) | | | | | | | | | +--Anaerosphaera sp. HMSC064C01 (1) | | | | | | | | | +--Peptoniphilus sp. ING2-D1G (1) | | | | | | | | | +--Peptoniphilus grossensis (1) | | | | | | | +--unclassifiedTissierellia (2) | | | | | | | +--Tissierellia bacterium KA00581 (1) | | | | | | | +--Tissierellia bacterium S5-A11 (1) | | | | | +--Firmicutes bacterium CAG:227 (1) | | | +--Verrucomicrobia (4) | | | | | +--Spartobacteria (4) | | | | | +--Chthoniobacter flavus Ellin428 (4) | | | +--FCBgroup (110) | | | +--Fibrobacteres (1) | | | | | +--Chitinivibrionia (1) | | | | | +--Chitinivibrionales (1) | | | | | +--Chitinivibrionaceae (1) | | | | | +--Chitinivibrio (1) | | | | | +--Chitinivibrio alkaliphilus ACht1 (1) | | | +--Bacteroidetes/Chlorobigroup (109) | | | +--Ignavibacteriae (1) | | | | | +--Ignavibacteria (1) | | | | | +--Ignavibacteria bacterium RIFOXYC2_FULL_35_21 (1) | | | +--Bacteroidetes (108) | | | +--Chitinophagia (3) | | | | | +--Chitinophagales (3) | | | | | +--Chitinophagaceae (3) | | | | | +--Niastella vici (2) | | | | | +--Niastella (1) | | | | | +--Niastella koreensis GR20-10 (1) | | | +--Sphingobacteriia (7) | | | | | +--Sphingobacteriales (7) | | | | | +--Sphingobacteriaceae (4) | | | | | | | +--Pedobacter glucosidilyticus (1) | | | | | | | +--Pedobacter (1) | | | | | | | | | +--Pedobacter antarcticus 4BY (1) | | | | | | | +--Sphingobacterium sp. JB170 (1) | | | | | | | +--Sphingobacterium (1) | | | | | | | +--Sphingobacterium paucimobilis HER1398 (1) | | | | | +--unclassifiedSphingobacteriales (3) | | | | | +--Sphingobacteriales bacterium 40-81 (2) | | | | | +--Sphingobacteriales bacterium 50-39 (1) | | | +--Bacteroidia (67) | | | | | +--Bacteroidia bacterium 44-10 (2) | | | | | +--Bacteroidales (48) | | | | | | | +--Paludibacteraceae (1) | | | | | | | | | +--Paludibacter sp. 47-17 (1) | | | | | | | +--Porphyromonadaceae (25) | | | | | | | | | +--Macellibacteroides sp. HH-ZS (2) | | | | | | | | | +--Petrimonas mucosa (21) | | | | | | | | | +--Porphyromonas sp. HMSC065F10 (1) | | | | | | | | | +--Barnesiella (1) | | | | | | | | | +--Barnesiella viscericola DSM 18177 (1) | | | | | | | +--unclassifiedBacteroidales (1) | | | | | | | | | +--Bacteroidales bacterium 52_46 (1) | | | | | | | +--Bacteroidaceae (10) | | | | | | | | | +--Bacteroides (10) | | | | | | | | | +--Bacteroides sp. CAG:462 (3) | | | | | | | | | +--Bacteroides cellulosilyticus CAG:158 (1) | | | | | | | | | +--Bacteroides sp. CAG:702 (1) | | | | | | | | | +--Bacteroides sp. CAG:545 (1) | | | | | | | | | +--Bacteroides oleiciplenus YIT 12058 (2) | | | | | | | | | +--Bacteroides plebeius CAG:211 (1) | | | | | | | | | +--Bacteroides nordii CL02T12C05 (1) | | | | | | | +--Dysgonamonadaceae (1) | | | | | | | | | +--Proteiniphilum saccharofermentans (1) | | | | | | | +--Prevotellaceae (10) | | | | | | | +--Alloprevotella (1) | | | | | | | | | +--Prevotella sp. oral taxon 473 str. F0040 (1) | | | | | | | +--Prevotella (9) | | | | | | | +--Prevotella copri CAG:164 (1) | | | | | | | +--Prevotella sp. CAG:891 (1) | | | | | | | +--Prevotella sp. CAG:1058 (1) | | | | | | | +--Prevotella salivae F0493 (1) | | | | | | | +--Prevotella sp. CAG:279 (1) | | | | | | | +--Prevotella sp. CAG:520 (2) | | | | | | | +--Prevotella sp. CAG:5226 (2) | | | | | +--Marinilabiliales (17) | | | | | +--Prolixibacteraceae (9) | | | | | | | +--Draconibacterium orientale (9) | | | | | +--Salinivirgaceae (2) | | | | | | | +--Salinivirga cyanobacteriivorans (2) | | | | | +--Marinilabiliaceae (6) | | | | | +--Geofilum (1) | | | | | | | +--Geofilum rubicundum JCM 15548 (1) | | | | | +--Saccharicrinis (5) | | | | | +--Saccharicrinis fermentans DSM 9555 = JCM 21142 (5) | | | +--Flavobacteriia (14) | | | | | +--Flavobacteriales (14) | | | | | +--Flavobacteriaceae (14) | | | | | +--Siansivirga (1) | | | | | | | +--Siansivirga zeaxanthinifaciens CC-SAMT-1 (1) | | | | | +--Leeuwenhoekiella (2) | | | | | | | +--Leeuwenhoekiella marinoflava DSM 3653 (2) | | | | | +--Algibacter sp. SK-16 (2) | | | | | +--Maribacter sp. T28 (1) | | | | | +--Arenibacter sp. C-21 (4) | | | | | +--Chryseobacterium (1) | | | | | | | +--Chryseobacterium haifense DSM 19056 (1) | | | | | +--Gillisia (2) | | | | | | | +--Gillisia limnaea DSM 15749 (2) | | | | | +--Flavobacterium sp. TAB 87 (1) | | | +--unclassifiedBacteroidetes (5) | | | | | +--Bacteroidetes bacterium GWF2_42_66 (1) | | | | | +--Bacteroidetes bacterium 4484_276 (1) | | | | | +--Bacteroidetes bacterium GWA2_30_7 (1) | | | | | +--Bacteroidetes bacterium GWA2_31_9 (1) | | | | | +--Bacteroidetes bacterium RIFCSPHIGHO2_02_FULL_44_7 (1) | | | +--Cytophagia (12) | | | +--Cytophagales (12) | | | +--Cyclobacteriaceae (10) | | | | | +--Indibacter (1) | | | | | | | +--Indibacter alkaliphilus LW1 (1) | | | | | +--Belliella (6) | | | | | | | +--Belliella baltica DSM 15883 (6) | | | | | +--Cecembia (1) | | | | | | | +--Cecembia lonarensis LW9 (1) | | | | | +--Lunatimonas lonarensis (2) | | | +--Hymenobacteraceae (1) | | | | | +--Pontibacter ummariensis (1) | | | +--Flammeovirgaceae (1) | | | +--Flammeovirga sp. SJP92 (1) | +--Archaea (5) | +--Euryarchaeota (5) | +--Methanomicrobia (2) | | | +--Methanosarcinales (2) | | | +--Methanosarcinaceae (2) | | | +--Methanosarcina sp. Ant1 (2) | +--unclassifiedEuryarchaeota (1) | | | +--Euryarchaeota archaeon RBG_13_31_8 (1) | +--Thermoplasmata (2) | +--methanogenic archaeon ISO4-H5 (1) | +--Methanomassiliicoccales (1) | +--Methanomassiliicoccaceae (1) | +--CandidatusMethanomethylophilus (1) | +--Candidatus Methanomethylophilus alvus Mx1201 (1)