INFERNAL1/a [1.1.4 | Dec 2020] NAME DUF805 ACC RF03081 DESC DUF805 RNA STATES 213 NODES 67 CLEN 68 W 85 ALPH RNA RF no CONS yes MAP yes DATE Tue Oct 2 00:50:00 2018 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 46 EFFN 6.100952 CKSUM 1020549017 NULL 0.000 0.000 0.000 0.000 GA 51.10 TC 51.10 NC 50.60 EFP7GF -13.4467 0.71889 ECMLC 0.65630 -7.47855 1.82775 1600000 539158 0.002226 ECMGC 0.38172 -16.15095 -3.38936 1600000 52199 0.007663 ECMLI 0.53494 -7.16345 3.24163 1600000 313683 0.003826 ECMGI 0.40300 -12.25512 -0.39347 1600000 47654 0.008394 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 85 104 -8.075 -8.282 -0.024 -6.697 IL 1 1 2 1 4 6 33 89 109 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 6 32 88 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 7 33 85 104 -9.035 -0.010 -7.689 0.640 -0.458 -1.034 0.294 D 4 2 3 5 3 3 27 83 103 -6.174 -1.687 -0.566 IL 5 5 3 5 3 5 32 87 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 6 32 84 103 -9.035 -0.010 -7.689 0.917 -0.615 -0.587 -0.333 D 7 5 3 8 3 2 27 82 102 -6.174 -1.687 -0.566 IL 8 8 3 8 3 5 31 86 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 6 31 83 102 -9.035 -0.010 -7.689 1.029 -0.717 -0.834 -0.340 D 10 8 3 11 3 2 26 81 101 -6.174 -1.687 -0.566 IL 11 11 3 11 3 5 30 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - a - - - ML 12 11 3 14 3 5 30 82 101 -9.035 -0.010 -7.689 0.757 -0.272 -0.971 -0.041 D 13 11 3 14 3 2 25 80 100 -6.174 -1.687 -0.566 IL 14 14 3 14 3 4 29 84 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 15 14 3 17 3 4 29 81 100 -9.375 -0.030 -5.708 0.983 -0.851 -0.777 -0.175 D 16 14 3 17 3 1 25 79 99 -5.620 -0.734 -1.403 IL 17 17 3 17 3 4 28 81 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 74 - a - - MR 18 17 3 20 3 5 29 80 99 -9.354 -0.009 -7.672 0.813 -0.454 -1.489 0.211 D 19 17 3 20 3 1 23 78 97 -6.702 -1.880 -0.477 IR 20 20 3 20 3 4 28 80 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 73 - a - - MR 21 20 3 23 3 5 28 79 98 -9.354 -0.009 -7.672 0.603 -0.741 -0.964 0.455 D 22 20 3 23 3 1 22 77 96 -6.702 -1.880 -0.477 IR 23 23 3 23 3 3 27 79 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 72 - A - - MR 24 23 3 26 3 4 27 78 97 -9.354 -0.009 -7.672 1.035 -1.161 -1.282 0.129 D 25 23 3 26 3 1 22 76 95 -6.702 -1.880 -0.477 IR 26 26 3 26 3 3 26 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 71 - A - - MR 27 26 3 29 3 4 27 77 96 -9.354 -0.009 -7.672 1.270 -1.140 -1.070 -0.604 D 28 26 3 29 3 0 21 75 94 -6.702 -1.880 -0.477 IR 29 29 3 29 3 3 26 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 70 - a - - MR 30 29 3 32 3 4 26 76 95 -9.354 -0.009 -7.672 0.606 -0.237 -0.664 -0.003 D 31 29 3 32 3 0 21 74 93 -6.702 -1.880 -0.477 IR 32 32 3 32 3 3 25 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 69 - A - - MR 33 32 3 35 3 4 25 75 94 -9.354 -0.009 -7.672 1.507 -1.846 -0.880 -1.570 D 34 32 3 35 3 0 20 73 92 -6.702 -1.101 -0.932 IR 35 35 3 35 3 2 24 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 68 - G - - MR 36 35 3 38 3 3 24 74 93 -9.375 -0.009 -7.693 0.031 -2.006 1.138 -0.919 D 37 35 3 38 3 0 19 72 91 -6.390 -1.568 -0.620 IR 38 38 3 38 3 2 23 74 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 67 - G - - MR 39 38 3 41 3 3 23 73 92 -2.059 -0.405 -7.693 -0.865 -2.384 1.487 -1.133 D 40 38 3 41 3 0 18 70 90 -6.390 -1.568 -0.620 IR 41 41 3 41 3 2 23 72 92 -3.292 -0.191 -5.531 0.000 0.000 0.000 0.000 [ MATR 14 ] - 65 - A - - MR 42 41 3 44 3 3 22 71 91 -9.375 -0.009 -7.693 1.936 -4.403 -3.875 -4.119 D 43 41 3 44 3 0 18 70 89 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 21 72 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 64 - U - - MR 45 44 3 47 3 3 21 70 90 -9.375 -0.009 -7.693 -3.442 -3.141 -4.229 1.904 D 46 44 3 47 3 0 17 69 88 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 21 71 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 63 - G - - MR 48 47 3 50 3 2 20 69 89 -9.375 -0.009 -7.693 -2.866 -4.052 1.868 -2.713 D 49 47 3 50 3 0 16 68 87 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 20 70 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 62 - A - - MR 51 50 3 53 3 2 19 68 88 -9.375 -0.009 -7.693 1.936 -4.403 -3.875 -4.119 D 52 50 3 53 3 0 16 67 86 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 19 69 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 61 - G - - MR 54 53 3 56 3 2 18 67 87 -9.375 -0.009 -7.693 -1.592 -2.114 1.586 -1.202 D 55 53 3 56 3 0 15 66 85 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 18 68 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 60 - u - - MR 57 56 3 59 3 2 17 66 86 -9.375 -0.009 -7.693 -0.053 0.117 -1.396 0.652 D 58 56 3 59 3 0 15 65 84 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 17 67 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 59 - A - - MR 60 59 3 62 3 1 16 65 84 -9.375 -0.034 -5.517 1.860 -2.837 -3.141 -3.101 D 61 59 3 62 3 0 14 64 83 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 16 66 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 58 - u - - MR 63 62 3 65 3 1 15 64 84 -9.350 -0.033 -5.572 0.406 -1.284 -0.922 0.796 D 64 62 3 65 3 0 14 63 82 -6.754 -1.043 -0.984 IR 65 65 3 65 3 1 16 65 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 57 - A - - MR 66 65 3 68 2 1 14 63 83 -9.545 -0.002 1.325 -1.816 -1.942 -0.075 D 67 65 3 68 2 0 13 62 82 -4.787 -0.053 IR 68 68 3 68 2 1 15 64 84 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 23 ] - - - - - - B 69 68 3 70 126 0 13 62 82 [ BEGL 24 ] - - - - - - S 70 69 1 71 4 0 0 32 50 -0.028 -7.510 -6.917 -7.557 [ MATP 25 ] 6 24 G C - - MP 71 70 1 75 6 2 2 32 50 -9.646 -9.585 -0.034 -5.927 -8.641 -9.036 -3.893 -1.750 -3.761 1.629 -4.681 -4.396 0.029 -4.385 -4.136 3.076 -4.431 0.057 0.092 -3.655 -1.938 -1.601 ML 72 70 1 75 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 73 70 1 75 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 74 70 1 75 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 75 75 5 75 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 76 76 6 76 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 7 23 U A - - MP 77 76 6 81 6 2 2 30 48 -9.626 -9.565 -0.015 -8.342 -8.622 -9.017 -4.246 -4.123 -4.212 0.285 -3.333 -4.916 0.993 -0.569 -4.189 -0.331 -4.639 -2.040 3.327 -4.483 -1.025 -3.092 ML 78 76 6 81 6 1 1 29 47 -6.582 -6.928 -0.927 -1.337 -6.778 -4.307 0.137 -0.738 0.524 -0.213 MR 79 76 6 81 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 80 76 6 81 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 81 81 5 81 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 82 82 6 82 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 8 22 G C - - MP 83 82 6 87 6 2 2 28 46 -9.646 -9.585 -0.015 -8.361 -8.641 -9.036 -4.253 -2.910 -4.133 1.218 -5.043 -4.686 -0.222 -4.701 -4.384 3.295 -4.683 -0.372 0.481 -4.005 -2.237 -3.074 ML 84 82 6 87 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 85 82 6 87 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 86 82 6 87 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 87 87 5 87 6 1 1 28 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 88 88 6 88 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 9 21 G C - - MP 89 88 6 93 4 2 2 26 44 -8.075 -8.282 -0.024 -6.697 -6.291 -2.009 -6.655 -0.942 -7.534 -5.343 -2.419 -7.031 -5.323 3.848 -5.570 -1.724 -2.714 -5.448 -4.570 -5.552 ML 90 88 6 93 4 1 1 27 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 91 88 6 93 4 1 1 26 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 92 88 6 93 4 0 0 25 44 -4.568 -4.250 -2.265 -0.520 IL 93 93 5 93 4 1 1 28 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 94 94 6 94 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 10 - A - - - ML 95 94 6 97 3 1 1 23 41 -9.035 -0.010 -7.689 1.936 -4.403 -3.875 -4.119 D 96 94 6 97 3 0 0 22 41 -6.174 -1.687 -0.566 IL 97 97 3 97 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 11 - G - - - ML 98 97 3 100 3 1 1 22 40 -9.035 -0.110 -3.810 -1.940 -4.013 1.843 -3.457 D 99 97 3 100 3 0 0 21 40 -6.174 -1.687 -0.566 IL 100 100 3 100 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 12 - a - - - ML 101 100 3 103 3 1 1 21 39 -8.936 -0.036 -5.461 0.688 -1.077 -0.964 0.488 D 102 100 3 103 3 0 0 20 38 -7.369 -2.882 -0.220 IL 103 103 3 103 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 13 - C - - - ML 104 103 3 106 3 1 1 20 38 -8.910 -0.011 -7.564 -1.438 1.567 -2.872 -0.911 D 105 103 3 106 3 0 0 19 37 -7.557 -0.443 -1.948 IL 106 106 3 106 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 14 - C - - - ML 107 106 3 109 3 1 1 18 37 -9.035 -0.010 -7.689 -0.884 1.379 -2.564 -0.540 D 108 106 3 109 3 0 0 18 37 -6.174 -1.687 -0.566 IL 109 109 3 109 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 15 - A - - - ML 110 109 3 112 3 1 1 17 35 -9.035 -0.010 -7.689 1.721 -2.207 -1.786 -2.354 D 111 109 3 112 3 0 0 17 36 -6.174 -1.687 -0.566 IL 112 112 3 112 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 16 - G - - - ML 113 112 3 115 3 1 1 16 34 -9.035 -0.010 -7.689 -2.438 -4.344 1.884 -3.749 D 114 112 3 115 3 0 0 16 34 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 17 - A - - - ML 116 115 3 118 3 1 1 15 32 -5.004 -0.053 -7.689 1.132 -0.583 -1.197 -0.504 D 117 115 3 118 3 0 0 14 32 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 1 17 34 -1.634 -0.671 -4.334 0.000 0.000 0.000 0.000 [ MATL 37 ] 19 - a - - - ML 119 118 3 121 3 1 1 12 31 -9.035 -0.010 -7.689 0.958 -0.589 -0.551 -0.495 D 120 118 3 121 3 0 0 13 32 -6.174 -1.687 -0.566 IL 121 121 3 121 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 20 - A - - - ML 122 121 3 124 2 1 1 1 1 * 0.000 1.472 -0.725 -1.786 -1.599 D 123 121 3 124 2 0 0 0 0 * 0.000 IL 124 124 3 124 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 39 ] - - - - - - E 125 124 3 -1 0 0 0 0 0 [ BEGR 40 ] - - - - - - S 126 69 1 127 3 0 2 43 62 -9.035 -0.027 -5.930 IL 127 127 2 127 3 1 2 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 25 - U - - - ML 128 127 2 130 3 1 2 43 62 -9.018 -0.010 -7.672 -0.585 -1.151 -1.490 1.337 D 129 127 2 130 3 0 0 42 61 -6.466 -1.195 -0.858 IL 130 130 3 130 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 26 - u - - - ML 131 130 3 133 3 1 2 42 61 -9.035 -0.038 -5.388 0.373 -0.578 -1.516 0.753 D 132 130 3 133 3 0 0 41 60 -6.174 -1.687 -0.566 IL 133 133 3 133 3 1 1 45 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 27 - a - - - ML 134 133 3 136 3 1 1 41 60 -9.007 -0.246 -2.693 0.348 -0.536 -0.334 0.315 D 135 133 3 136 3 0 0 40 59 -6.628 -2.141 -0.390 IL 136 136 3 136 3 1 1 44 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 28 - A - - - ML 137 136 3 139 3 1 1 40 59 -1.319 -0.784 -5.757 1.710 -1.976 -2.370 -1.834 D 138 136 3 139 3 0 0 38 57 -3.514 -1.113 -1.152 IL 139 139 3 139 3 1 1 40 59 -1.898 -0.558 -4.246 0.000 0.000 0.000 0.000 [ MATL 45 ] 32 - A - - - ML 140 139 3 142 3 1 1 38 57 -8.888 -0.011 -7.542 1.530 -1.708 -2.066 -0.819 D 141 139 3 142 3 0 0 37 56 -7.698 -0.396 -2.089 IL 142 142 3 142 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 33 - A - - - ML 143 142 3 145 3 1 1 37 56 -9.035 -0.010 -7.689 1.862 -2.863 -3.153 -3.118 D 144 142 3 145 3 0 0 36 55 -6.174 -1.687 -0.566 IL 145 145 3 145 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 34 - A - - - ML 146 145 3 148 3 1 1 36 55 -9.035 -0.010 -7.689 1.862 -2.865 -3.153 -3.120 D 147 145 3 148 3 0 0 35 54 -6.174 -1.687 -0.566 IL 148 148 3 148 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 35 - A - - - ML 149 148 3 151 3 1 1 35 54 -9.035 -0.010 -7.689 1.867 -3.645 -2.490 -3.403 D 150 148 3 151 3 0 0 34 53 -6.174 -1.687 -0.566 IL 151 151 3 151 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 36 - C - - - ML 152 151 3 154 3 1 1 34 53 -9.035 -0.010 -7.689 -2.312 1.741 -3.009 -1.588 D 153 151 3 154 3 0 0 33 52 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 37 - G - - - ML 155 154 3 157 3 1 1 33 52 -9.035 -0.107 -3.847 -0.821 -2.586 1.554 -1.597 D 156 154 3 157 3 0 0 32 51 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 38 - G - - - ML 158 157 3 160 5 1 1 32 51 -7.974 -0.061 -7.790 -8.002 -5.124 -0.733 -2.442 1.512 -1.466 D 159 157 3 160 5 0 0 31 50 -5.731 -0.415 -4.992 -3.367 -3.279 IL 160 160 3 160 5 1 1 32 51 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 39 56 G C - - MP 161 160 3 165 6 2 2 31 50 -9.622 -9.562 -0.015 -8.338 -8.618 -9.013 -5.253 -3.495 -5.267 0.349 -6.157 -5.114 -0.673 -5.751 -4.924 3.686 -5.203 -1.191 -1.570 -4.815 -3.313 -4.180 ML 162 160 3 165 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 163 160 3 165 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 164 160 3 165 6 0 0 28 47 -9.524 -8.222 -1.547 -4.702 -4.719 -0.794 IL 165 165 5 165 6 1 1 31 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 166 166 6 166 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 40 55 G C - - MP 167 166 6 171 6 2 2 29 48 -9.646 -9.585 -0.015 -8.361 -8.641 -9.036 -5.413 -2.162 -5.467 0.043 -6.536 -5.181 -1.561 -5.984 -5.007 3.716 -5.285 -0.584 -1.827 -4.933 -3.620 -4.380 ML 168 166 6 171 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 169 166 6 171 6 1 1 29 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 170 166 6 171 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 171 171 5 171 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 172 172 6 172 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 41 54 c g - - MP 173 172 6 177 4 2 2 27 46 -8.075 -8.282 -0.024 -6.697 -3.411 -3.380 -2.505 0.840 -2.828 -4.321 2.957 -2.202 -3.475 0.450 -4.003 -1.388 1.389 -3.669 -0.173 -2.412 ML 174 172 6 177 4 1 1 28 47 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 175 172 6 177 4 1 1 28 47 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 176 172 6 177 4 0 0 27 46 -4.568 -4.250 -2.265 -0.520 IL 177 177 5 177 4 1 1 30 48 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 178 178 6 178 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 42 - G - - - ML 179 178 6 181 3 1 1 24 43 -9.035 -0.010 -7.689 -1.514 -3.253 1.746 -2.398 D 180 178 6 181 3 0 0 24 42 -6.174 -1.687 -0.566 IL 181 181 3 181 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 43 - a - - - ML 182 181 3 184 3 1 1 23 42 -9.035 -0.010 -7.689 0.374 -0.858 -0.167 0.335 D 183 181 3 184 3 0 0 23 41 -6.174 -1.687 -0.566 IL 184 184 3 184 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 44 - a - - - ML 185 184 3 187 3 1 1 22 40 -9.035 -0.031 -5.704 0.880 -0.678 -0.833 -0.040 D 186 184 3 187 3 0 0 21 40 -6.174 -1.687 -0.566 IL 187 187 3 187 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 45 - A - - - ML 188 187 3 190 3 1 1 21 39 -9.014 -0.010 -7.668 1.191 -1.580 -1.386 -0.001 D 189 187 3 190 3 0 0 20 39 -6.528 -1.118 -0.920 IL 190 190 3 190 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 46 - C - - - ML 191 190 3 193 3 1 1 20 38 -9.035 -0.010 -7.689 -1.310 1.248 -2.525 0.067 D 192 190 3 193 3 0 0 19 38 -6.174 -1.687 -0.566 IL 193 193 3 193 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 47 - C - - - ML 194 193 3 196 3 1 1 18 37 -1.984 -0.451 -5.982 -1.407 1.338 -2.631 -0.101 D 195 193 3 196 3 0 0 17 35 -6.174 -1.687 -0.566 IL 196 196 3 196 3 1 1 18 37 -2.595 -0.306 -5.295 0.000 0.000 0.000 0.000 [ MATL 61 ] 49 - G - - - ML 197 196 3 199 3 1 1 17 35 -9.019 -0.010 -7.673 -1.781 -3.890 1.825 -3.344 D 198 196 3 199 3 0 0 17 35 -6.453 -1.212 -0.844 IL 199 199 3 199 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 50 - A - - - ML 200 199 3 202 3 1 1 15 34 -9.035 -0.010 -7.689 1.774 -1.943 -2.767 -2.535 D 201 199 3 202 3 0 0 16 34 -6.174 -1.687 -0.566 IL 202 202 3 202 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 51 - A - - - ML 203 202 3 205 3 1 1 14 32 -9.035 -0.055 -4.814 1.794 -3.272 -1.714 -3.005 D 204 202 3 205 3 0 0 14 33 -6.174 -1.687 -0.566 IL 205 205 3 205 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 52 - A - - - ML 206 205 3 208 3 1 1 12 31 -8.990 -0.010 -7.644 1.769 -1.936 -2.716 -2.483 D 207 205 3 208 3 0 0 13 31 -6.849 -0.816 -1.240 IL 208 208 3 208 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 53 - A - - - ML 209 208 3 211 2 1 1 1 1 * 0.000 1.785 -2.898 -2.259 -2.250 D 210 208 3 211 2 0 0 0 0 * 0.000 IL 211 211 3 211 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 66 ] - - - - - - E 212 211 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME DUF805 ACC RF03081 DESC DUF805 RNA LENG 68 MAXL 139 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Oct 2 00:50:00 2018 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED NSEQ 46 EFFN 8.139282 CKSUM 1020549017 STATS LOCAL MSV -8.3521 0.71889 STATS LOCAL VITERBI -8.9540 0.71889 STATS LOCAL FORWARD -4.0205 0.71889 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 0.94272 1.66484 1.40166 1.74284 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 0.00000 * 1 0.91830 1.71958 2.16306 1.18192 1 a - - : 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 2 0.71800 1.82724 1.81019 1.67240 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 3 0.63651 1.90814 2.00242 1.67398 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 4 0.83420 1.56772 2.11194 1.44284 4 a - - : 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 5 0.67017 2.01948 1.95792 1.53943 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 6 1.50148 2.76271 0.49214 2.27532 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 7 2.53262 1.89355 2.89595 0.33580 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 8 1.85248 2.95328 0.38480 2.20364 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 9 3.13024 4.48830 0.06946 4.40981 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 10 0.03071 4.80210 4.42160 4.60384 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 11 2.83603 4.45738 0.09151 4.06285 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.09154 4.80155 2.53508 1.46634 0.26236 1.09861 0.40547 12 0.88053 2.22766 2.10950 1.03182 12 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03720 4.72786 3.58734 1.46634 0.26236 2.45490 0.08978 13 2.50184 0.25635 3.63506 2.13869 13 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01819 4.70885 4.70885 1.46634 0.26236 0.15689 1.92961 14 2.06621 0.38292 3.40904 1.84267 14 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 15 0.16570 3.02075 2.71946 3.26959 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 16 3.22287 4.70566 0.06486 4.27475 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 17 0.56053 1.80097 2.29840 1.81073 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04891 3.23107 4.80155 0.37406 1.16455 1.09861 0.40547 18 0.68709 1.80303 1.78277 1.80794 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 19 0.32392 1.88369 2.79046 2.76037 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 20 4.56360 0.06613 4.39484 3.18860 21 C - - > 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 21 2.34197 0.43631 2.77623 1.63386 22 C - - > 1.38629 1.38629 1.38629 1.38629 0.04138 4.80155 3.43209 1.46634 0.26236 1.09861 0.40547 22 0.35365 3.22275 2.10192 1.99646 23 A - - > 1.38629 1.38629 1.38629 1.38629 0.01698 4.77715 4.77715 1.46634 0.26236 0.41111 1.08742 23 2.62432 0.56575 2.56526 1.26345 24 C - - > 1.38629 1.38629 1.38629 1.38629 0.02921 4.80155 3.88388 1.46634 0.26236 1.09861 0.40547 24 1.85032 2.28897 2.50787 0.41551 25 U - - - 1.38629 1.38629 1.38629 1.38629 0.01678 4.78912 4.78912 1.46634 0.26236 0.58718 0.81169 25 1.11120 1.82092 2.56771 0.83876 26 u - - - 1.38629 1.38629 1.38629 1.38629 0.03748 4.80155 3.55529 1.46634 0.26236 1.09861 0.40547 26 1.13828 1.77936 1.61375 1.16556 27 a - - - 1.38629 1.38629 1.38629 1.38629 0.17085 4.78098 1.90608 1.46634 0.26236 1.70061 0.20159 27 0.16789 2.85530 3.26853 2.83107 28 A - - - 1.38629 1.38629 1.38629 1.38629 0.55500 0.90947 3.76403 0.31430 1.31044 0.61524 0.77764 28 0.28244 2.71068 3.04951 2.02354 32 A - - - 1.38629 1.38629 1.38629 1.38629 0.01800 4.71957 4.71957 1.46634 0.26236 0.17317 1.83880 29 0.07597 3.50030 3.85253 3.82846 33 A - - - 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 30 0.07589 3.50177 3.85313 3.82935 34 A - - - 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 31 0.07373 4.20332 3.24573 4.06333 35 A - - - 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 32 3.19405 0.14668 3.62886 2.67547 36 C - - - 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 33 2.01416 3.36837 0.27851 2.58743 37 G - - - 1.38629 1.38629 1.38629 1.38629 0.08946 4.80155 2.55925 1.46634 0.26236 1.09861 0.40547 34 1.95666 3.26956 0.30291 2.50129 38 G - - - 1.38629 1.38629 1.38629 1.38629 0.04954 4.72989 3.23143 1.46634 0.26236 0.19263 1.74177 35 2.51990 3.24937 0.15749 3.63255 39 G - - < 1.38629 1.38629 1.38629 1.38629 0.01706 4.77258 4.77258 1.46634 0.26236 0.36945 1.17477 36 2.61439 3.93299 0.12229 3.80249 40 G - - < 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 37 2.04018 0.60492 2.27241 1.51044 41 C - - < 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 38 2.52142 3.83850 0.15540 3.16881 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 39 1.11897 2.03833 1.48897 1.14717 43 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 40 0.74452 1.88412 2.00175 1.43559 44 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03228 4.80155 3.74892 1.46634 0.26236 1.09861 0.40547 41 0.51401 2.66001 2.46860 1.39733 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01683 4.78610 4.78610 1.46634 0.26236 0.52947 0.88896 42 2.43478 0.47578 3.37426 1.35969 46 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 43 2.50352 0.41551 3.44724 1.48559 47 C - - _ 1.38629 1.38629 1.38629 1.38629 0.35169 1.28535 3.91458 0.05840 2.86949 1.09861 0.40547 44 2.71641 4.36651 0.10253 3.98213 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01677 4.78975 4.78975 1.46634 0.26236 0.60093 0.79475 45 0.13071 2.78920 3.56991 3.41423 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 46 0.12094 3.93614 2.63397 3.78988 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05051 4.80155 3.19324 1.46634 0.26236 1.09861 0.40547 47 0.13323 2.78865 3.53441 3.37970 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01714 4.76817 4.76817 1.46634 0.26236 0.33680 1.25195 48 0.12586 3.60634 3.08839 3.08932 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 49 1.75686 2.44958 0.53120 1.87612 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 50 3.95903 0.15219 3.74691 2.31766 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.04603 4.80155 3.30308 1.46634 0.26236 1.09861 0.40547 51 3.78908 0.18157 3.12433 2.30804 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.03554 4.77258 3.63206 1.46634 0.26236 0.36945 1.17477 52 0.41997 2.87265 2.97175 1.44745 57 A - - : 1.38629 1.38629 1.38629 1.38629 0.03651 4.78390 3.59409 1.46634 0.26236 0.49428 0.94164 53 1.08933 2.41169 2.07206 0.80304 58 u - - : 1.38629 1.38629 1.38629 1.38629 0.01689 4.78258 4.78258 1.46634 0.26236 0.47534 0.97200 54 0.07714 3.47974 3.84407 3.81601 59 A - - : 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 55 1.43854 1.28201 2.45326 0.91821 60 u - - : 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 56 2.68335 2.96265 0.25239 2.27259 61 G - - : 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 57 0.03071 4.80210 4.42160 4.60384 62 A - - : 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 58 3.66211 4.50007 0.07428 3.35802 63 G - - : 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 59 4.12941 3.88450 4.68114 0.04701 64 U - - : 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 60 0.03071 4.80210 4.42160 4.60384 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.32842 1.30296 4.80155 0.05942 2.85269 1.09861 0.40547 61 2.06609 3.23795 0.31936 2.23065 67 G - - : 1.38629 1.38629 1.38629 1.38629 0.01657 4.80155 4.80155 1.46634 0.26236 1.09861 0.40547 62 1.38301 2.98245 0.54749 2.11935 68 G - - : 1.38629 1.38629 1.38629 1.38629 0.03276 4.80155 3.72927 1.46634 0.26236 1.09861 0.40547 63 0.30195 2.79973 2.03392 2.67396 69 A - - : 1.38629 1.38629 1.38629 1.38629 0.01684 4.78563 4.78563 1.46634 0.26236 1.59372 0.22711 64 0.94521 1.54072 1.86841 1.41549 70 a - - : 1.38629 1.38629 1.38629 1.38629 0.01684 4.78563 4.78563 1.46634 0.26236 1.59372 0.22711 65 0.46172 2.24653 2.19325 1.88071 71 A - - : 1.38629 1.38629 1.38629 1.38629 0.01684 4.78563 4.78563 1.46634 0.26236 1.59372 0.22711 66 0.62780 2.29064 2.37527 1.30179 72 A - - : 1.38629 1.38629 1.38629 1.38629 0.01684 4.78563 4.78563 1.46634 0.26236 1.59372 0.22711 67 0.94489 1.94717 2.10586 1.05883 73 a - - : 1.38629 1.38629 1.38629 1.38629 0.01684 4.78563 4.78563 1.46634 0.26236 1.59372 0.22711 68 0.78720 1.71582 2.55501 1.24697 74 a - - : 1.38629 1.38629 1.38629 1.38629 0.00845 4.77724 * 1.46634 0.26236 0.00000 * //