INFERNAL1/a [1.1.4 | Dec 2020] NAME Cupriavidus-1 ACC RF02949 DESC Cupriavidus-1 RNA STATES 248 NODES 62 CLEN 78 W 98 ALPH RNA RF no CONS yes MAP yes DATE Tue Oct 2 01:07:40 2018 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 1.821289 CKSUM 1023757911 NULL 0.000 0.000 0.000 0.000 GA 45.50 TC 45.50 NC 40.40 EFP7GF -7.9080 0.71901 ECMLC 0.52020 -11.30183 0.56478 1600000 575534 0.002085 ECMGC 0.36085 -15.99070 -3.25938 1600000 39558 0.010112 ECMLI 0.45106 -10.25106 2.78001 1600000 428436 0.002801 ECMGI 0.39399 -10.64179 0.83230 1600000 36760 0.010881 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 3 0 1 98 120 -5.131 -15.600 -0.042 IL 1 1 2 1 3 7 34 118 162 -0.610 -4.491 -1.736 0.000 0.000 0.000 0.000 IR 2 2 3 2 2 7 33 100 122 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 1 ] - - - - - - B 3 2 3 112 4 5 32 98 120 [ BEGR 36 ] - - - - - - S 4 3 1 5 3 0 0 54 76 -7.923 -0.021 -6.577 IL 5 5 2 5 3 1 1 57 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 46 - a - - - ML 6 5 2 8 3 1 1 54 76 -7.923 -0.021 -6.577 0.673 -0.891 -0.259 0.043 D 7 5 2 8 3 0 0 53 74 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 1 56 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 47 - C - - - ML 9 8 3 11 3 1 1 53 75 -7.923 -0.021 -6.577 -0.863 1.036 -1.670 0.118 D 10 8 3 11 3 0 0 52 73 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 1 55 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 48 - g - - - ML 12 11 3 14 3 1 1 52 74 -7.923 -0.021 -6.577 -0.442 -0.624 0.975 -0.624 D 13 11 3 14 3 0 0 50 72 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 1 54 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 49 - c - - - ML 15 14 3 17 3 1 1 51 73 -7.923 -0.021 -6.577 -0.688 0.600 -1.470 0.587 D 16 14 3 17 3 0 0 49 71 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 1 53 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 50 - G - - - ML 18 17 3 20 3 1 1 50 72 -7.923 -0.021 -6.577 -1.491 -2.697 1.702 -2.084 D 19 17 3 20 3 0 0 48 70 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 1 52 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 51 - U - - - ML 21 20 3 23 3 1 1 49 71 -7.923 -0.021 -6.577 -1.409 -1.419 -2.139 1.596 D 22 20 3 23 3 0 0 47 69 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 1 51 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 52 - A - - - ML 24 23 3 26 3 1 1 48 70 -7.923 -0.303 -2.430 1.700 -2.288 -1.928 -1.822 D 25 23 3 26 3 0 0 47 68 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 1 50 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 53 - c - - - ML 27 26 3 29 5 1 1 47 69 -6.819 -0.047 -6.634 -6.846 -7.738 0.295 0.435 -0.982 -0.128 D 28 26 3 29 5 0 0 46 68 -5.874 -0.371 -5.135 -3.510 -3.423 IL 29 29 3 29 5 1 1 47 69 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 54 93 C G - - MP 30 29 3 34 6 2 2 46 68 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -4.469 -4.368 -4.172 -0.607 -2.908 -4.595 3.525 -3.710 -4.219 -0.355 -4.488 -2.314 0.614 -4.543 -0.613 -3.061 ML 31 29 3 34 6 1 1 44 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 3 34 6 1 1 44 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 3 34 6 0 0 42 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 1 46 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 1 45 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 55 92 c g - - MP 36 35 6 40 6 2 2 44 66 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -3.362 -2.902 -3.350 0.744 -2.790 -4.050 2.376 -3.287 -3.382 2.188 -3.823 -0.725 1.090 -3.490 -0.431 -2.255 ML 37 35 6 40 6 1 1 42 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 1 42 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 0 40 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 1 44 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 1 43 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 56 91 G C - - MP 42 41 6 46 6 2 2 42 64 -4.694 -9.030 -0.076 -7.806 -8.086 -8.481 -4.664 -3.057 -4.756 0.252 -5.123 -4.663 -0.507 -4.993 -4.277 3.619 -4.619 -0.753 -0.894 -4.417 -2.540 -3.634 ML 43 41 6 46 6 1 1 40 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 1 40 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 38 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 1 42 64 -3.020 -1.451 -1.201 -4.938 -5.714 -5.374 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 1 41 63 -2.691 -0.394 -6.203 -4.370 -5.476 0.000 0.000 0.000 0.000 [ MATP 48 ] 58 89 g c - - MP 48 47 6 52 6 2 2 40 62 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -3.261 -2.454 -3.273 1.093 -3.381 -3.980 1.393 -3.548 -3.383 2.727 -3.807 0.507 0.654 -3.294 -0.976 -2.237 ML 49 47 6 52 6 1 1 38 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 1 39 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 36 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 1 40 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 1 39 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 59 88 c g - - MP 54 53 6 58 6 2 2 38 60 -9.090 -9.030 -0.087 -7.806 -4.397 -8.481 -3.125 -3.014 -3.152 1.182 -2.435 -3.875 2.572 -3.021 -3.159 0.926 -3.632 -1.025 1.351 -3.333 0.670 -2.087 ML 55 53 6 58 6 1 1 36 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 1 38 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 34 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 1 38 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 1 37 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 60 87 g c - - MP 60 59 6 64 6 2 2 36 58 -4.741 -8.965 -0.075 -7.742 -8.021 -8.416 -2.813 -2.396 -2.883 1.780 -2.714 -3.681 1.469 -3.051 -2.954 2.062 -3.441 -0.302 1.101 -2.990 0.296 -1.890 ML 61 59 6 64 6 1 1 34 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 37 59 -7.572 -1.531 -2.210 -6.280 -1.414 -4.493 -0.117 -1.034 0.897 -0.459 D 63 59 6 64 6 0 0 32 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 37 59 -2.990 -1.504 -1.171 -4.908 -5.684 -5.345 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 37 59 -1.214 -0.935 -7.077 -5.245 -6.351 0.000 0.000 0.000 0.000 [ MATP 51 ] 62 82 c g - - MP 66 65 6 70 6 2 2 32 50 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -2.996 -2.861 -3.053 0.753 -2.442 -3.818 2.239 -2.987 -3.067 1.523 -3.562 -0.863 1.734 -3.208 0.602 -1.998 ML 67 65 6 70 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 28 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 32 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 63 81 c g - - MP 72 71 6 76 4 2 2 30 48 -1.623 -8.068 -0.894 -2.904 -3.078 -2.931 -3.111 0.666 -2.460 -3.839 2.284 -3.023 -3.132 1.544 -3.607 -0.939 1.322 -3.277 1.218 -2.061 ML 73 71 6 76 4 1 1 28 47 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 4 1 1 27 46 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 75 71 6 76 4 0 0 25 44 -12.737 -14.007 -2.036 -0.404 IL 76 76 5 76 4 1 1 29 47 -1.685 -1.826 -1.506 -4.187 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 1 27 45 -2.650 -0.721 -2.095 0.000 0.000 0.000 0.000 [ MATR 53 ] - 79 - a - - MR 78 77 6 80 5 1 1 26 44 -6.777 -0.049 -6.593 -6.805 -7.697 0.303 -0.163 -0.100 -0.090 D 79 77 6 80 5 0 0 25 43 -6.247 -0.337 -3.873 -5.304 -3.299 IR 80 80 3 80 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 67 78 g c - - MP 81 80 3 85 6 2 2 25 43 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -3.074 -2.475 -3.122 1.067 -3.006 -3.879 1.829 -3.297 -3.194 2.356 -3.652 0.519 0.946 -3.194 -0.666 -2.085 ML 82 80 3 85 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 3 85 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 3 85 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 68 77 c g - - MP 87 86 6 91 6 2 2 23 41 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -3.363 -2.924 -3.351 0.727 -2.764 -4.052 2.423 -3.272 -3.379 2.128 -3.821 -0.752 1.110 -3.497 -0.408 -2.252 ML 88 86 6 91 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 69 76 c g - - MP 93 92 6 97 4 2 2 21 39 -6.903 -7.110 -0.055 -5.524 -3.092 -2.733 -3.142 1.344 -2.680 -3.933 2.333 -3.135 -3.162 1.759 -3.649 -0.598 1.230 -3.284 -0.352 -2.066 ML 94 92 6 97 4 1 1 22 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 70 - g - - - ML 99 98 6 101 3 1 1 17 35 -2.296 -0.348 -6.577 0.088 -0.660 0.649 -0.442 D 100 98 6 101 3 0 0 15 33 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 17 35 -1.978 -0.500 -4.678 0.000 0.000 0.000 0.000 [ MATL 58 ] 72 - A - - - ML 102 101 3 104 3 1 1 15 33 -7.923 -0.021 -6.577 1.126 -0.524 -1.143 -0.578 D 103 101 3 104 3 0 0 15 33 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 73 - A - - - ML 105 104 3 107 3 1 1 13 26 -2.296 -0.542 -3.189 1.700 -2.288 -1.928 -1.822 D 106 104 3 107 3 0 0 10 23 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 13 27 -1.978 -0.893 -2.268 0.000 0.000 0.000 0.000 [ MATL 60 ] 75 - u - - - ML 108 107 3 110 2 1 1 1 1 * 0.000 -0.224 -0.679 -0.200 0.721 D 109 107 3 110 2 0 0 0 0 * 0.000 IL 110 110 3 110 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 61 ] - - - - - - E 111 110 3 -1 0 0 0 0 0 [ BEGL 2 ] - - - - - - S 112 3 1 113 4 0 10 59 78 -0.045 -6.811 -6.218 -6.858 [ MATP 3 ] 1 45 c g - - MP 113 112 1 117 6 2 13 59 78 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -3.378 -3.135 -3.357 1.294 -2.577 -4.064 2.787 -3.164 -3.353 0.914 -3.801 -1.016 1.212 -3.577 -0.251 -2.248 ML 114 112 1 117 6 1 8 57 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 115 112 1 117 6 1 8 57 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 116 112 1 117 6 0 5 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 117 117 5 117 6 1 9 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 118 118 6 118 5 1 9 58 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 44 u a - - MP 119 118 6 123 6 2 12 57 76 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -2.554 -2.567 -2.668 0.727 -2.322 -3.454 1.592 -2.793 -2.716 1.001 -3.236 -0.842 2.496 -0.332 -0.234 -1.768 ML 120 118 6 123 6 1 8 55 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 121 118 6 123 6 1 8 55 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 122 118 6 123 6 0 4 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 123 123 5 123 6 1 8 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 124 124 6 124 5 1 9 56 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 43 u a - - MP 125 124 6 129 6 2 12 55 74 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -2.627 -2.637 -2.725 0.685 -2.296 -3.496 1.674 -2.795 -2.762 0.890 -0.148 -0.884 2.471 -2.899 -0.182 -1.808 ML 126 124 6 129 6 1 7 53 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 127 124 6 129 6 1 7 53 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 128 124 6 129 6 0 4 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 129 129 5 129 6 1 8 54 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 130 130 6 130 5 1 8 54 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 42 G C - - MP 131 130 6 135 6 2 11 53 72 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -4.664 -3.057 -4.756 0.252 -5.123 -4.663 -0.507 -4.993 -4.277 3.619 -4.619 -0.753 -0.894 -4.417 -2.540 -3.634 ML 132 130 6 135 6 1 7 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 133 130 6 135 6 1 7 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 134 130 6 135 6 0 4 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 135 135 5 135 6 1 8 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 136 136 6 136 5 1 8 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 41 C G - - MP 137 136 6 141 6 2 9 51 70 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -4.469 -4.368 -4.172 -0.607 -2.908 -4.595 3.525 -3.710 -4.219 -0.355 -4.488 -2.314 0.614 -4.543 -0.613 -3.061 ML 138 136 6 141 6 1 6 49 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 139 136 6 141 6 1 7 49 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 140 136 6 141 6 0 4 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 141 141 5 141 6 1 7 50 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 142 142 6 142 5 1 7 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 40 a u - - MP 143 142 6 147 4 2 7 49 68 -3.225 -8.068 -0.242 -4.522 -2.772 -2.619 -2.853 1.834 -2.440 -3.634 1.706 -2.914 -2.896 1.321 -3.398 -0.680 1.602 -2.997 0.624 -1.874 ML 144 142 6 147 4 1 5 48 67 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 145 142 6 147 4 1 6 47 67 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 146 142 6 147 4 0 3 46 65 -12.737 -14.007 -2.036 -0.404 IL 147 147 5 147 4 1 6 48 68 -1.809 -5.058 -0.756 -3.437 0.000 0.000 0.000 0.000 IR 148 148 6 148 3 1 6 48 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 39 - A - - MR 149 148 6 151 5 1 6 46 66 -7.057 -0.192 -6.873 -3.259 -7.976 1.700 -2.288 -1.928 -1.822 D 150 148 6 151 5 0 3 45 65 -5.352 -0.707 -2.978 -4.409 -2.404 IR 151 151 3 151 5 1 6 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 38 u a - - MP 152 151 3 156 4 2 7 45 65 -6.718 -6.925 -0.063 -5.339 -3.036 -2.759 -3.075 1.389 -2.534 -3.864 1.746 -3.022 -3.082 1.265 -3.567 -0.653 2.275 -3.270 -0.247 -2.015 ML 153 151 3 156 4 1 4 46 65 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 154 151 3 156 4 1 3 45 64 -5.481 -4.510 -2.378 -0.432 -0.234 0.708 -0.952 -0.001 D 155 151 3 156 4 0 2 44 64 -4.568 -4.250 -2.265 -0.520 IL 156 156 5 156 4 1 5 47 67 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 157 157 6 157 3 1 5 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - u - - - ML 158 157 6 160 5 1 5 43 62 -6.910 -0.044 -6.725 -6.937 -7.829 0.205 -0.256 -0.355 0.296 D 159 157 6 160 5 0 2 42 61 -5.605 -0.460 -4.866 -3.241 -3.154 IL 160 160 3 160 5 1 4 43 62 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 11 37 G C - - MP 161 160 3 165 6 2 6 42 61 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -4.664 -3.057 -4.756 0.252 -5.123 -4.663 -0.507 -4.993 -4.277 3.619 -4.619 -0.753 -0.894 -4.417 -2.540 -3.634 ML 162 160 3 165 6 1 2 40 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 163 160 3 165 6 1 3 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 164 160 3 165 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 165 165 5 165 6 1 3 41 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 166 166 6 166 5 1 3 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 12 36 C G - - MP 167 166 6 171 4 2 4 40 59 -6.823 -8.068 -0.083 -4.522 -4.469 -4.368 -4.172 -0.607 -2.908 -4.595 3.525 -3.710 -4.219 -0.355 -4.488 -2.314 0.614 -4.543 -0.613 -3.061 ML 168 166 6 171 4 1 2 39 58 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 169 166 6 171 4 1 2 39 58 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 170 166 6 171 4 0 0 37 56 -12.737 -14.007 -2.036 -0.404 IL 171 171 5 171 4 1 2 39 58 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 172 172 6 172 3 1 3 39 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 35 - G - - MR 173 172 6 175 3 1 3 38 57 -8.316 -0.019 -6.633 -1.491 -2.697 1.702 -2.084 D 174 172 6 175 3 0 0 36 55 -6.390 -1.568 -0.620 IR 175 175 3 175 3 1 2 38 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 34 - A - - MR 176 175 3 178 3 1 2 37 56 -8.316 -0.019 -6.633 1.113 -0.501 -1.137 -0.566 D 177 175 3 178 3 0 0 35 54 -6.390 -1.568 -0.620 IR 178 178 3 178 3 1 2 37 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 33 - A - - MR 179 178 3 181 2 1 1 36 55 -8.307 -0.005 1.099 -1.088 -1.133 -0.103 D 180 178 3 181 2 0 0 35 54 -4.432 -0.068 IR 181 181 3 181 2 1 1 37 56 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 17 ] - - - - - - B 182 181 3 183 203 0 0 35 54 [ BEGL 18 ] - - - - - - S 183 182 1 184 4 0 0 20 38 -0.045 -6.811 -6.218 -6.858 [ MATP 19 ] 13 18 g c - - MP 184 183 1 188 4 2 2 20 38 -6.903 -7.110 -0.055 -5.524 -3.621 -2.724 -3.587 0.836 -3.468 -4.162 1.450 -3.748 -3.646 2.980 -4.034 -0.461 0.528 -3.592 -1.033 -2.517 ML 185 183 1 188 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 186 183 1 188 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 187 183 1 188 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 188 188 5 188 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 189 189 6 189 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 14 - G - - - ML 190 189 6 192 3 1 1 16 35 -7.923 -0.021 -6.577 -1.491 -2.697 1.702 -2.084 D 191 189 6 192 3 0 0 16 34 -6.174 -1.687 -0.566 IL 192 192 3 192 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 15 - U - - - ML 193 192 3 195 3 1 1 15 33 -7.923 -0.021 -6.577 -1.409 -1.419 -2.139 1.596 D 194 192 3 195 3 0 0 15 33 -6.174 -1.687 -0.566 IL 195 195 3 195 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 16 - G - - - ML 196 195 3 198 3 1 1 13 32 -7.923 -0.021 -6.577 -1.491 -2.697 1.702 -2.084 D 197 195 3 198 3 0 0 13 32 -6.174 -1.687 -0.566 IL 198 198 3 198 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 17 - A - - - ML 199 198 3 201 2 1 1 1 1 * 0.000 1.700 -2.288 -1.928 -1.822 D 200 198 3 201 2 0 0 0 0 * 0.000 IL 201 201 3 201 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 24 ] - - - - - - E 202 201 3 -1 0 0 0 0 0 [ BEGR 25 ] - - - - - - S 203 182 1 204 5 0 0 28 46 -7.057 -0.040 -6.873 -7.085 -7.976 IL 204 204 2 204 5 1 1 29 48 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 19 32 C G - - MP 205 204 2 209 6 2 2 28 46 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -4.469 -4.368 -4.172 -0.607 -2.908 -4.595 3.525 -3.710 -4.219 -0.355 -4.488 -2.314 0.614 -4.543 -0.613 -3.061 ML 206 204 2 209 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 207 204 2 209 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 208 204 2 209 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 209 209 5 209 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 210 210 6 210 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 20 31 G C - - MP 211 210 6 215 6 2 2 26 44 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -4.664 -3.057 -4.756 0.252 -5.123 -4.663 -0.507 -4.993 -4.277 3.619 -4.619 -0.753 -0.894 -4.417 -2.540 -3.634 ML 212 210 6 215 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 213 210 6 215 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 214 210 6 215 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 215 215 5 215 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 216 216 6 216 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 21 30 G C - - MP 217 216 6 221 6 2 2 24 42 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -4.664 -3.057 -4.756 0.252 -5.123 -4.663 -0.507 -4.993 -4.277 3.619 -4.619 -0.753 -0.894 -4.417 -2.540 -3.634 ML 218 216 6 221 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 219 216 6 221 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 220 216 6 221 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 221 221 5 221 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 222 222 6 222 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 22 29 C G - - MP 223 222 6 227 6 2 2 22 40 -9.090 -9.030 -0.021 -7.806 -8.086 -8.481 -3.801 -3.723 -3.630 0.031 -2.504 -4.157 3.050 -3.238 -3.649 0.295 -4.010 -1.693 1.732 -3.915 -0.176 -2.506 ML 224 222 6 227 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 225 222 6 227 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 226 222 6 227 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 227 227 5 227 6 1 1 22 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 228 228 6 228 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 23 28 g c - - MP 229 228 6 233 4 2 2 20 38 -6.903 -7.110 -0.055 -5.524 -2.510 -2.259 -2.618 1.076 -2.513 -3.388 1.817 -2.864 -2.704 2.169 -3.201 -0.361 1.099 -0.578 -0.396 -1.718 ML 230 228 6 233 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 231 228 6 233 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 232 228 6 233 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 233 233 5 233 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 234 234 6 234 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 24 - A - - - ML 235 234 6 237 3 1 1 16 35 -7.923 -0.021 -6.577 1.700 -2.288 -1.928 -1.822 D 236 234 6 237 3 0 0 16 34 -6.174 -1.687 -0.566 IL 237 237 3 237 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 25 - a - - - ML 238 237 3 240 3 1 1 15 33 -7.923 -0.021 -6.577 0.757 -0.421 -0.980 0.079 D 239 237 3 240 3 0 0 15 33 -6.174 -1.687 -0.566 IL 240 240 3 240 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 26 - u - - - ML 241 240 3 243 3 1 1 13 32 -7.923 -0.021 -6.577 0.057 -0.835 0.147 0.369 D 242 240 3 243 3 0 0 13 32 -6.174 -1.687 -0.566 IL 243 243 3 243 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 27 - a - - - ML 244 243 3 246 2 1 1 1 1 * 0.000 0.371 0.108 -1.008 0.179 D 245 243 3 246 2 0 0 0 0 * 0.000 IL 246 246 3 246 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 35 ] - - - - - - E 247 246 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME Cupriavidus-1 ACC RF02949 DESC Cupriavidus-1 RNA LENG 78 MAXL 161 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Oct 2 01:07:40 2018 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED NSEQ 5 EFFN 4.272461 CKSUM 1023757911 STATS LOCAL MSV -8.4124 0.71901 STATS LOCAL VITERBI -9.5038 0.71901 STATS LOCAL FORWARD -3.5450 0.71901 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.55105 1.29620 1.10717 1.69330 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 0.00000 * 1 1.68333 0.55522 2.40895 1.89454 1 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 2 2.60355 1.78325 2.40736 0.40370 2 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 3 2.75687 1.83440 1.60032 0.55344 3 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 4 3.07941 3.96112 0.08901 3.90544 4 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 5 3.98811 0.10897 3.85119 2.75747 5 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 6 1.12396 1.68191 1.95304 1.05799 6 u - - ( 1.38629 1.38629 1.38629 1.38629 0.38544 1.88816 1.78082 0.76031 0.63021 1.09861 0.40547 7 1.57472 1.69311 1.97323 0.75506 9 u - - ( 1.38629 1.38629 1.38629 1.38629 0.03475 4.06994 4.06994 1.46634 0.26236 2.61470 0.07601 8 1.25308 1.54558 1.61524 1.19619 10 u - - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.06994 4.06994 1.46634 0.26236 0.15827 1.92155 9 3.07245 3.95067 0.08989 3.89133 11 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 10 3.97483 0.10961 3.84364 2.75487 12 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 11 2.33521 1.76874 0.43283 2.47703 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 12 3.42147 4.37977 0.06696 3.93352 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 13 3.32499 3.17443 3.86267 0.10403 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 14 3.42147 4.37977 0.06696 3.93352 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 15 0.07063 3.98129 3.64131 3.75874 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 16 2.71872 0.47866 1.67961 2.05589 18 C - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 17 4.03531 0.10676 3.87769 2.76652 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 18 3.08899 3.97557 0.08780 3.92504 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 19 3.08508 3.96967 0.08829 3.91702 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 20 3.12381 0.43758 2.90637 1.36359 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 21 2.01875 1.32182 1.00008 1.45811 23 g - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 22 0.07063 3.98129 3.64131 3.75874 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 23 0.73560 1.71097 2.33628 1.41303 25 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 24 1.41697 2.19410 1.16214 1.09879 26 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 25 1.09248 1.18960 2.34450 1.33036 27 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 26 2.04152 0.90107 1.21373 1.79008 28 c - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 27 1.50035 3.07182 0.39389 2.87914 29 G - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 28 4.08376 0.10681 3.82804 2.76923 30 C - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 29 4.09886 0.10616 3.83555 2.77192 31 C - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 30 3.05906 4.04863 0.09066 3.80344 32 G - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 31 0.45882 2.50924 2.57418 1.55862 33 A - - , 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 32 0.42960 1.75484 2.64003 2.25440 34 A - - , 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 33 3.42147 4.37977 0.06696 3.93352 35 G - - , 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 34 3.01405 3.97337 0.09663 3.72098 36 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 35 3.93808 0.11363 3.75260 2.74151 37 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 36 0.93622 1.70210 1.62197 1.47805 38 a - - ) 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 37 0.07063 3.98129 3.64131 3.75874 39 A - - - 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 38 1.50399 2.11860 1.18099 1.04815 40 u - - ) 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 39 3.03641 4.01047 0.09363 3.76156 41 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 40 4.05058 0.10828 3.81132 2.76320 42 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 41 0.61172 2.75795 1.15785 2.52569 43 A - - ) 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 42 0.65271 1.67039 1.61405 2.38472 44 A - - ) 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 43 2.14244 2.59470 0.50693 1.58171 45 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 44 0.83495 2.22996 1.55989 1.39266 46 a - - - 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 45 2.58749 0.43620 3.21507 1.43486 47 C - - - 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 46 2.19490 1.89399 0.43417 2.40395 48 G - - - 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 47 2.34583 0.77172 2.94802 0.94271 49 c - - - 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 48 3.42147 4.37977 0.06696 3.93352 50 G - - - 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 49 3.32499 3.17443 3.86267 0.10403 51 U - - - 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 50 0.07063 3.98129 3.64131 3.75874 52 A - - - 1.38629 1.38629 1.38629 1.38629 0.31545 4.23724 1.36223 1.46634 0.26236 1.09861 0.40547 51 1.18235 0.86548 2.38783 1.71058 53 c - - - 1.38629 1.38629 1.38629 1.38629 0.03885 3.96064 3.96064 1.46634 0.26236 0.10691 2.28877 52 3.95481 0.11059 3.83217 2.75088 54 C - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 53 2.43887 0.87552 1.04951 1.92425 55 c - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 54 3.06943 3.94615 0.09027 3.88523 56 G - - < 1.38629 1.38629 1.38629 1.38629 0.16798 1.96483 4.23724 0.19473 1.73190 1.09861 0.40547 55 2.00290 1.79677 0.51776 2.26944 58 G - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 56 1.77510 0.77221 2.23945 1.33931 59 c - - < 1.38629 1.38629 1.38629 1.38629 0.19657 4.23724 1.80784 1.46634 0.26236 1.09861 0.40547 57 1.20722 1.90896 1.10196 1.51177 60 g - - < 1.38629 1.38629 1.38629 1.38629 0.18665 1.87548 4.07524 0.20859 1.66986 0.16227 1.89853 58 2.25217 1.09914 1.55561 1.04807 62 u - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 59 2.46361 1.04587 1.54993 1.04633 63 c - - < 1.38629 1.38629 1.38629 1.38629 0.63377 0.78754 4.23724 0.54827 0.86264 1.09861 0.40547 60 2.02466 1.36009 0.74616 1.98675 67 g - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 61 2.44895 0.83718 1.10269 1.90575 68 c - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 62 1.66969 0.93144 1.44037 1.70998 69 c - - < 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 63 1.46075 1.92008 0.70443 2.06396 70 g - - _ 1.38629 1.38629 1.38629 1.38629 0.36268 1.23877 4.23724 0.09690 2.38209 1.09861 0.40547 64 0.42060 1.77784 2.64779 2.26781 72 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 65 0.07063 3.98129 3.64131 3.75874 73 A - - _ 1.38629 1.38629 1.38629 1.38629 0.34465 1.96483 1.88816 0.19473 1.73190 1.09861 0.40547 66 1.76536 2.07777 1.51064 0.72795 75 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03405 4.09002 4.09002 1.46634 0.26236 0.17472 1.83065 67 1.94038 1.55698 0.85054 1.52144 76 g - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 68 2.15456 1.16525 0.77168 2.20761 77 g - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 69 2.23051 0.99913 1.26654 1.41665 78 c - - > 1.38629 1.38629 1.38629 1.38629 0.16798 4.23724 1.96483 1.46634 0.26236 1.09861 0.40547 70 1.18365 1.43687 1.36668 1.60336 79 a - - - 1.38629 1.38629 1.38629 1.38629 0.22831 1.67347 4.10287 0.16773 1.86811 0.18741 1.76668 71 1.95108 1.63611 0.58914 2.22247 81 G - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 72 1.41466 1.66352 0.83493 2.01279 82 g - - > 1.38629 1.38629 1.38629 1.38629 0.34866 1.27326 4.23724 1.00872 0.45363 1.09861 0.40547 73 2.06397 1.28230 1.28575 1.14191 87 u - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 74 1.93595 2.41076 0.55286 1.65726 88 G - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 75 2.50662 0.70428 1.68973 1.42953 89 c - - > 1.38629 1.38629 1.38629 1.38629 0.16798 1.96483 4.23724 0.19473 1.73190 1.09861 0.40547 76 3.98356 0.11139 3.77672 2.75051 91 C - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 77 2.16096 1.11389 0.81312 2.18006 92 g - - > 1.38629 1.38629 1.38629 1.38629 0.02932 4.23724 4.23724 1.46634 0.26236 1.09861 0.40547 78 2.97763 3.91407 0.10170 3.65642 93 G - - > 1.38629 1.38629 1.38629 1.38629 0.01477 4.22269 * 1.46634 0.26236 0.00000 * //