INFERNAL1/a [1.1.4 | Dec 2020] NAME NiCo ACC RF02683 DESC NiCo riboswitch STATES 302 NODES 80 CLEN 96 W 189 ALPH RNA RF no CONS yes MAP yes DATE Sun Oct 23 01:23:25 2022 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/14.9/3Dfams/3Dreview/RF02683/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 83 EFFN 2.829315 CKSUM 540905899 NULL 0.000 0.000 0.000 0.000 GA 34.00 TC 34.00 NC 33.90 EFP7GF -9.5621 0.71864 ECMLC 0.70328 -5.05790 2.41763 1600000 230373 0.005209 ECMGC 0.41345 -14.17355 -3.92132 1600000 27728 0.014426 ECMLI 0.66115 -3.88778 3.72296 1600000 183854 0.006527 ECMGI 0.46683 -8.47308 0.61347 1600000 27814 0.014381 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 189 298 -7.276 -7.483 -0.105 -4.100 IL 1 1 2 1 4 11 44 191 301 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 10 43 191 300 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 12 43 190 299 -8.214 -0.017 -6.868 1.132 -0.902 -1.041 -0.345 D 4 2 3 5 3 7 37 187 296 -6.708 -2.221 -0.366 IL 5 5 3 5 3 10 42 190 299 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 3 11 42 189 298 -8.214 -0.017 -6.868 -0.614 1.089 -1.712 -0.130 D 7 5 3 8 3 6 37 186 295 -6.708 -2.221 -0.366 IL 8 8 3 8 3 10 42 189 298 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 11 41 188 297 -8.214 -0.017 -6.868 1.440 -1.533 -1.156 -1.025 D 10 8 3 11 3 6 36 185 294 -6.708 -1.542 -0.628 IL 11 11 3 11 3 9 41 188 297 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 10 41 187 296 -8.238 -0.017 -6.892 -0.309 -1.256 1.037 -0.468 D 13 11 3 14 3 6 35 184 293 -6.509 -2.022 -0.429 IL 14 14 3 14 3 9 40 187 296 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 10 40 186 295 -8.238 -0.017 -6.892 -0.958 -0.500 -1.591 1.291 D 16 14 3 17 3 6 35 183 292 -6.509 -1.593 -0.605 IL 17 17 3 17 3 9 39 186 295 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 9 39 185 294 -8.252 -0.017 -6.906 1.126 -1.027 -0.794 -0.416 D 19 17 3 20 3 5 34 182 291 -6.380 -1.893 -0.476 IL 20 20 3 20 3 8 38 185 294 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - c - - - ML 21 20 3 23 3 9 38 184 293 -8.252 -0.017 -6.906 -0.559 0.942 -1.500 0.066 D 22 20 3 23 3 5 33 181 290 -6.380 -1.893 -0.476 IL 23 23 3 23 3 8 38 184 293 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 8 37 183 292 -8.252 -0.036 -5.572 1.280 -1.432 -0.795 -0.678 D 25 23 3 26 3 5 33 181 290 -6.380 -1.893 -0.476 IL 26 26 3 26 3 8 37 183 292 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 8 36 182 291 -8.608 -0.022 -6.301 1.448 -1.493 -1.334 -0.947 D 28 26 3 29 3 5 32 180 289 -5.859 -0.594 -1.642 IL 29 29 3 29 3 7 35 182 291 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 235 - a - - MR 30 29 3 32 5 8 35 181 290 -7.359 -0.050 -7.174 -5.792 -8.278 0.651 -0.869 -0.196 0.014 D 31 29 3 32 5 4 30 179 288 -5.387 -0.742 -2.756 -4.445 -2.439 IR 32 32 3 32 5 6 34 181 290 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 10 234 a u - - MP 33 32 3 37 6 9 35 180 289 -6.847 -9.169 -0.030 -7.945 -8.225 -8.620 -1.581 -2.111 -2.192 2.274 -1.785 -3.038 1.357 -2.495 -2.270 1.180 -2.825 -0.496 1.170 -2.330 -0.263 -0.691 ML 34 32 3 37 6 5 31 178 287 -6.294 -6.640 -1.355 -0.962 -6.490 -4.020 0.497 -0.475 -0.196 -0.006 MR 35 32 3 37 6 5 30 177 286 -7.097 -5.826 -1.735 -5.804 -0.749 -4.018 0.447 -0.456 -0.293 0.126 D 36 32 3 37 6 3 26 173 282 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 6 33 179 288 -2.684 -2.947 -0.692 -4.602 -5.378 -5.038 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 6 33 179 288 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 12 233 c g - - MP 39 38 6 43 6 8 33 178 287 -9.230 -6.747 -0.030 -7.945 -8.225 -8.620 -2.644 -2.639 -2.777 1.010 -2.350 -3.603 2.575 -2.835 -2.283 0.990 -2.630 -0.702 1.486 -2.923 -0.064 -1.805 ML 40 38 6 43 6 5 30 176 285 -6.294 -6.640 -1.355 -0.962 -6.490 -4.020 0.308 -0.214 -0.309 0.128 MR 41 38 6 43 6 5 29 175 284 -7.097 -5.826 -1.735 -5.804 -0.749 -4.018 0.479 -0.571 0.000 -0.100 D 42 38 6 43 6 3 26 172 281 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 6 31 177 286 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 6 31 177 286 -2.478 -0.469 -5.989 -4.156 -5.262 0.000 0.000 0.000 0.000 [ MATP 13 ] 13 231 u a - - MP 45 44 6 49 6 8 31 176 285 -9.230 -9.169 -0.019 -7.945 -8.225 -8.620 -2.538 -2.532 -2.674 1.091 -2.339 -3.510 1.687 -2.792 -1.965 1.267 -3.247 -0.729 2.299 -2.815 -0.091 -1.541 ML 46 44 6 49 6 5 29 174 283 -6.294 -6.640 -1.355 -0.962 -6.490 -4.020 0.306 -0.370 -0.262 0.210 MR 47 44 6 49 6 5 28 174 283 -7.097 -5.826 -1.735 -5.804 -0.749 -4.018 0.630 -0.564 -0.266 -0.082 D 48 44 6 49 6 3 26 171 280 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 5 30 175 284 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 5 30 175 284 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 14 230 G C - - MP 51 50 6 55 4 7 29 174 283 -7.248 -7.455 -0.043 -5.870 -4.769 -1.680 -4.827 0.205 -5.592 -4.716 -0.852 -5.265 -4.453 3.640 -4.763 -0.819 -1.140 -4.413 -2.876 -3.751 ML 52 50 6 55 4 4 28 173 282 -3.791 -3.973 -0.493 -2.703 0.388 -0.503 0.030 -0.052 MR 53 50 6 55 4 4 26 172 281 -4.935 -3.964 -1.831 -0.684 0.213 -0.004 -0.448 0.151 D 54 50 6 55 4 2 25 171 280 -4.568 -4.250 -2.265 -0.520 IL 55 55 5 55 4 5 29 174 283 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 56 56 6 56 3 5 28 173 282 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 57 56 6 59 3 5 27 172 281 -8.252 -0.017 -6.906 1.819 -2.955 -2.530 -2.557 D 58 56 6 59 3 2 25 170 279 -6.380 -1.893 -0.476 IL 59 59 3 59 3 5 27 172 281 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - g - - - ML 60 59 3 62 3 5 26 171 280 -8.625 -0.022 -6.318 0.070 -1.107 0.562 0.014 D 61 59 3 62 3 2 24 169 278 -5.749 -0.654 -1.532 IL 62 62 3 62 3 4 26 171 280 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 229 - A - - MR 63 62 3 65 5 4 25 170 279 -7.359 -0.050 -7.174 -5.792 -8.278 1.822 -2.981 -2.553 -2.586 D 64 62 3 65 5 2 23 168 277 -5.387 -0.742 -2.756 -4.445 -2.439 IR 65 65 3 65 5 4 25 170 279 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 17 228 C G - - MP 66 65 3 70 4 5 24 169 278 -7.248 -7.455 -0.043 -5.870 -5.172 -5.131 -4.753 -1.318 -3.349 -5.082 3.705 -4.221 -4.830 -1.150 -5.017 -3.093 0.094 -5.198 -1.077 -3.651 ML 67 65 3 70 4 3 23 168 277 -3.791 -3.973 -0.493 -2.703 0.308 -0.214 -0.309 0.128 MR 68 65 3 70 4 2 22 167 276 -4.935 -3.964 -1.831 -0.684 0.313 -0.575 0.208 -0.103 D 69 65 3 70 4 1 21 166 275 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 3 24 169 278 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 3 24 168 277 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - A - - - ML 72 71 6 74 3 3 22 167 276 -8.625 -0.022 -6.318 1.819 -2.955 -2.530 -2.557 D 73 71 6 74 3 1 21 165 274 -5.749 -0.654 -1.532 IL 74 74 3 74 3 3 23 167 276 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 227 - G - - MR 75 74 3 77 3 2 22 166 275 -8.637 -0.015 -6.955 -1.591 -3.083 1.754 -2.498 D 76 74 3 77 3 1 20 164 273 -6.452 -1.630 -0.587 IR 77 77 3 77 3 2 22 166 275 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 226 - G - - MR 78 77 3 80 2 1 21 165 274 -8.711 -0.003 -2.207 -3.514 1.833 -2.899 D 79 77 3 80 2 0 20 164 273 -4.497 -0.065 IR 80 80 3 80 2 2 21 165 274 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 22 ] - - - - - - B 81 80 3 82 171 0 20 164 273 [ BEGL 23 ] - - - - - - S 82 81 1 83 4 0 0 116 224 -0.051 -7.009 -5.989 -6.443 [ MATP 24 ] 19 113 G C - - MP 83 82 1 87 6 2 2 116 224 -9.233 -7.541 -0.025 -7.948 -8.228 -8.623 -4.592 -3.020 -4.636 0.371 -5.467 -4.767 -0.728 -5.038 -4.345 3.539 -4.690 0.392 -1.008 -4.375 -2.748 -3.526 ML 84 82 1 87 6 1 1 114 222 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 85 82 1 87 6 1 1 114 222 -7.044 -5.773 -1.515 -5.751 -0.885 -3.965 0.282 -0.152 -0.351 0.137 D 86 82 1 87 6 0 0 110 218 -9.129 -7.828 -3.625 -4.307 -4.324 -0.300 IL 87 87 5 87 6 1 1 115 223 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 88 88 6 88 5 1 1 115 223 -2.442 -0.483 -5.953 -4.121 -5.227 0.000 0.000 0.000 0.000 [ MATP 25 ] 20 111 G C - - MP 89 88 6 93 6 2 2 114 222 -9.237 -9.177 -0.019 -7.953 -8.233 -8.628 -4.626 -3.052 -4.671 0.837 -5.412 -4.787 -0.685 -5.041 -4.362 3.563 -4.708 -0.710 -0.991 -4.411 -2.713 -3.553 ML 90 88 6 93 6 1 1 112 220 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 91 88 6 93 6 1 1 112 220 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 92 88 6 93 6 0 0 108 216 -9.129 -7.828 -3.625 -4.307 -4.324 -0.300 IL 93 93 5 93 6 1 1 113 221 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 94 94 6 94 5 1 1 113 221 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 21 110 C G - - MP 95 94 6 99 6 2 2 112 220 -9.237 -9.177 -0.019 -7.953 -8.233 -8.628 -4.581 -4.554 -4.259 -0.723 -2.919 -4.659 3.478 -3.733 -4.295 -0.530 -4.571 -2.523 1.062 -4.626 -0.596 -3.118 ML 96 94 6 99 6 1 1 110 218 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 97 94 6 99 6 1 1 110 218 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 98 94 6 99 6 0 0 107 215 -9.129 -7.828 -3.625 -4.307 -4.324 -0.300 IL 99 99 5 99 6 1 1 112 219 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 100 100 6 100 5 1 1 111 219 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 22 109 c g - - MP 101 100 6 105 4 2 2 110 218 -4.721 -8.404 -0.206 -3.438 -1.163 -1.738 -1.426 1.163 -0.500 -2.576 1.537 -2.074 -0.697 0.983 -0.171 -0.388 1.345 -1.866 0.021 -0.856 ML 102 100 6 105 4 1 1 109 217 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 103 100 6 105 4 1 1 109 217 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 104 100 6 105 4 0 0 106 214 -13.081 -14.351 -2.379 -0.308 IL 105 105 5 105 4 1 1 109 217 -2.997 -4.500 -0.526 -2.878 0.000 0.000 0.000 0.000 IR 106 106 6 106 3 1 1 110 218 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 108 - g - - MR 107 106 6 109 3 1 1 108 216 -5.843 -0.050 -5.889 -0.202 -0.430 0.706 -0.401 D 108 106 6 109 3 0 0 106 214 -7.088 -1.865 -0.478 IR 109 109 3 109 3 1 1 109 217 -2.003 -0.519 -4.241 0.000 0.000 0.000 0.000 [ MATR 29 ] - 106 - G - - MR 110 109 3 112 5 1 1 107 215 -7.283 -0.044 -7.099 -6.299 -8.202 -0.870 -1.920 1.495 -1.434 D 111 109 3 112 5 0 0 105 213 -5.767 -0.697 -3.393 -4.824 -2.092 IR 112 112 3 112 5 1 1 107 215 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 24 105 a u - - MP 113 112 3 117 6 2 2 107 214 -7.817 -9.161 -0.024 -7.938 -8.217 -8.612 -1.994 -1.942 -1.808 1.771 -2.197 -2.970 1.224 -2.507 -1.790 1.678 -2.077 0.718 1.116 -2.267 -0.324 -1.368 ML 114 112 3 117 6 1 1 104 212 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 115 112 3 117 6 1 1 104 212 -7.044 -5.773 -1.682 -5.751 -0.786 -3.965 0.537 -0.502 -0.211 -0.031 D 116 112 3 117 6 0 0 99 207 -9.308 -8.007 -3.804 -4.486 -4.503 -0.262 IL 117 117 5 117 6 1 1 106 214 -2.621 -2.884 -0.732 -4.539 -5.315 -4.976 0.000 0.000 0.000 0.000 IR 118 118 6 118 5 1 1 105 213 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 26 104 u a - - MP 119 118 6 123 6 2 2 105 213 -9.222 -9.161 -0.044 -7.938 -8.217 -5.684 -2.716 -2.709 -2.841 0.923 -2.160 -3.678 2.027 -2.867 -2.845 1.209 -3.388 -0.738 2.044 -2.990 0.516 -1.645 ML 120 118 6 123 6 1 1 102 210 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 121 118 6 123 6 1 1 102 210 -7.044 -5.773 -1.682 -5.751 -0.786 -3.965 0.537 -0.502 -0.211 -0.031 D 122 118 6 123 6 0 0 97 205 -9.308 -8.007 -3.804 -4.486 -4.503 -0.262 IL 123 123 5 123 6 1 1 104 212 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 124 124 6 124 5 1 1 104 212 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 27 103 g c - - MP 125 124 6 129 6 2 2 103 211 -9.197 -9.136 -0.020 -7.913 -8.193 -8.588 -3.076 -2.319 -2.637 1.517 -3.405 -3.797 0.875 -3.503 -2.833 2.758 -3.711 0.206 0.684 -3.070 -1.060 -2.118 ML 126 124 6 129 6 1 1 100 208 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 127 124 6 129 6 1 1 100 208 -7.044 -5.773 -1.682 -5.751 -0.786 -3.965 0.537 -0.502 -0.211 -0.031 D 128 124 6 129 6 0 0 95 203 -9.640 -8.339 -4.136 -4.818 -4.835 -0.204 IL 129 129 5 129 6 1 1 102 210 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 130 130 6 130 5 1 1 102 210 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 28 102 c g - - MP 131 130 6 135 6 2 2 101 209 -9.197 -9.136 -0.020 -7.913 -8.193 -8.588 -2.186 -2.166 -2.338 1.636 -1.955 -3.161 1.719 -2.599 -2.235 1.690 -2.467 -0.214 1.311 -2.456 -0.119 -1.493 ML 132 130 6 135 6 1 1 99 207 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 133 130 6 135 6 1 1 98 206 -7.044 -5.773 -1.682 -5.751 -0.786 -3.965 0.279 -0.366 -0.292 0.256 D 134 130 6 135 6 0 0 94 202 -9.640 -8.339 -4.136 -4.818 -4.835 -0.204 IL 135 135 5 135 6 1 1 100 208 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 136 136 6 136 5 1 1 100 208 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 29 101 c g - - MP 137 136 6 141 6 2 2 99 207 -9.197 -5.941 -0.118 -5.589 -5.036 -6.713 -1.396 -1.667 -1.573 1.554 -1.426 -2.659 1.709 -2.141 -1.539 1.116 -2.445 -0.438 1.390 -1.801 0.244 -1.062 ML 138 136 6 141 6 1 1 97 205 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 139 136 6 141 6 1 1 96 204 -7.044 -5.773 -1.682 -5.751 -0.885 -3.289 0.370 -0.524 0.083 -0.070 D 140 136 6 141 6 0 0 94 201 -9.640 -8.339 -4.136 -4.818 -1.806 -0.696 IL 141 141 5 141 6 1 1 98 206 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 142 142 6 142 5 1 1 98 206 -2.535 -0.548 -3.951 -4.214 -5.320 0.000 0.000 0.000 0.000 [ MATP 35 ] 30 99 c g - - MP 143 142 6 147 4 2 2 97 205 -6.952 -7.159 -0.109 -4.123 -1.684 -1.677 -1.874 1.128 -1.501 -2.717 1.923 -1.832 -1.505 1.074 -2.494 -0.257 1.579 -1.655 0.101 -1.031 ML 144 142 6 147 4 1 1 96 204 -4.097 -4.280 -0.385 -3.009 -0.033 0.224 -0.728 0.323 MR 145 142 6 147 4 1 1 94 202 -5.558 -4.587 -2.455 -0.406 0.231 -0.281 -0.562 0.407 D 146 142 6 147 4 0 0 93 201 -4.937 -4.619 -2.299 -0.467 IL 147 147 5 147 4 1 1 97 205 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 148 148 6 148 3 1 1 96 204 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 31 - u - - - ML 149 148 6 151 3 1 1 95 203 -8.024 -0.020 -6.679 0.107 -0.246 -0.167 0.250 D 150 148 6 151 3 0 0 91 199 -7.660 -2.626 -0.264 IL 151 151 3 151 3 1 1 95 203 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 32 - u - - - ML 152 151 3 154 3 1 1 94 202 -3.619 -0.166 -5.189 -0.082 -0.218 -0.715 0.666 D 153 151 3 154 3 0 0 91 199 -7.584 -1.188 -0.847 IL 154 154 3 154 3 1 1 94 202 -1.306 -1.216 -2.600 0.000 0.000 0.000 0.000 [ MATL 38 ] 37 - u - - - ML 155 154 3 157 3 1 1 93 201 -8.046 -0.114 -3.796 0.374 -0.635 -0.390 0.375 D 156 154 3 157 3 0 0 88 196 -7.584 -2.462 -0.298 IL 157 157 3 157 3 1 1 94 201 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 38 - u - - - ML 158 157 3 160 3 1 1 92 200 -7.980 -0.115 -3.783 0.223 -0.614 -0.583 0.596 D 159 157 3 160 3 0 0 87 195 -7.805 -2.330 -0.328 IL 160 160 3 160 3 1 1 93 201 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 39 - a - - - ML 161 160 3 163 3 1 1 92 199 -1.544 -0.940 -2.880 0.376 -0.458 -0.527 0.357 D 162 160 3 163 3 0 0 84 192 -3.082 -2.895 -0.420 IL 163 163 3 163 3 1 1 97 205 -0.246 -2.826 -5.978 0.000 0.000 0.000 0.000 [ MATL 41 ] 97 - a - - - ML 164 163 3 166 3 1 1 13 32 -7.769 -0.090 -4.158 0.709 -0.975 0.134 -0.397 D 165 163 3 166 3 0 0 12 30 -8.300 -1.136 -0.884 IL 166 166 3 166 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 98 - a - - - ML 167 166 3 169 2 1 1 1 1 * 0.000 0.562 -0.897 0.088 -0.114 D 168 166 3 169 2 0 0 0 0 * 0.000 IL 169 169 3 169 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 43 ] - - - - - - E 170 169 3 -1 0 0 0 0 0 [ BEGR 44 ] - - - - - - S 171 81 1 172 3 0 4 121 222 -8.272 -0.026 -6.068 IL 172 172 2 172 3 1 5 123 224 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 114 - G - - - ML 173 172 2 175 3 1 4 121 222 -8.262 -0.017 -6.916 -2.201 -3.507 1.832 -2.892 D 174 172 2 175 3 0 3 120 220 -6.280 -1.476 -0.672 IL 175 175 3 175 3 1 5 122 223 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 115 - G - - - ML 176 175 3 178 2 1 3 120 221 -8.719 -0.003 -2.220 -3.528 1.834 -2.913 D 177 175 3 178 2 0 2 119 220 -8.445 -0.004 IL 178 178 3 178 2 1 4 121 221 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 47 ] - - - - - - B 179 178 3 180 224 0 2 119 220 [ BEGL 48 ] - - - - - - S 180 179 1 181 4 0 0 34 58 -0.044 -6.573 -6.416 -7.056 [ MATP 49 ] 116 133 G C - - MP 181 180 1 185 6 2 2 34 58 -9.239 -9.178 -0.019 -7.954 -8.234 -8.629 -4.988 -3.217 -5.100 0.250 -5.863 -4.862 -1.068 -5.455 -4.544 3.681 -4.867 -0.782 -1.372 -4.641 -3.121 -3.976 ML 182 180 1 185 6 1 1 32 56 -6.294 -6.640 -1.355 -0.962 -6.490 -4.020 0.388 -0.503 0.030 -0.052 MR 183 180 1 185 6 1 1 32 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 184 180 1 185 6 0 0 29 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 185 185 5 185 6 1 1 33 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 186 186 6 186 5 1 1 33 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 117 132 C G - - MP 187 186 6 191 6 2 2 32 56 -9.239 -9.178 -0.028 -7.954 -8.234 -6.827 -4.219 -4.178 -3.993 -0.346 -2.752 -4.475 3.220 -3.521 -4.006 -0.142 -4.343 -2.130 1.676 -4.306 -0.302 -2.839 ML 188 186 6 191 6 1 1 30 54 -6.294 -6.640 -1.355 -0.962 -6.490 -4.020 0.308 -0.214 -0.309 0.128 MR 189 186 6 191 6 1 1 30 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 190 186 6 191 6 0 0 27 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 191 191 5 191 6 1 1 31 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 192 192 6 192 5 1 1 31 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 118 131 C G - - MP 193 192 6 197 6 2 2 30 54 -9.230 -9.169 -0.038 -7.945 -7.163 -6.413 -3.787 -3.720 -3.700 0.326 -2.665 -4.315 3.034 -3.361 -3.693 0.278 -4.108 -1.668 1.320 -3.946 0.706 -2.559 ML 194 192 6 197 6 1 1 28 52 -6.294 -6.640 -1.248 -1.049 -6.490 -4.020 0.308 -0.214 -0.309 0.128 MR 195 192 6 197 6 1 1 28 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 196 192 6 197 6 0 0 25 49 -9.208 -7.906 -3.703 -4.385 -4.403 -0.282 IL 197 197 5 197 6 1 1 29 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 198 198 6 198 5 1 1 29 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 119 130 g c - - MP 199 198 6 203 6 2 2 28 52 -9.214 -9.153 -0.054 -7.930 -8.210 -5.282 -3.174 -2.162 -3.156 1.499 -3.513 -3.858 0.935 -3.590 -3.393 2.763 -3.788 0.274 0.591 -3.134 -1.028 -1.740 ML 200 198 6 203 6 1 1 26 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 201 198 6 203 6 1 1 26 50 -7.052 -5.781 -1.690 -5.759 -0.781 -3.973 0.553 -0.513 -0.219 -0.040 D 202 198 6 203 6 0 0 23 47 -9.412 -8.110 -3.907 -4.589 -4.606 -0.242 IL 203 203 5 203 6 1 1 27 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 204 204 6 204 5 1 1 27 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 120 129 c g - - MP 205 204 6 209 4 2 2 26 50 -7.131 -1.847 -0.606 -4.107 -2.921 -2.834 -3.014 0.880 -2.456 -3.817 2.529 -2.979 -3.014 1.191 -3.533 -0.873 1.602 -3.164 -0.131 -0.972 ML 206 204 6 209 4 1 1 24 48 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 207 204 6 209 4 1 1 24 48 -4.883 -3.912 -1.780 -0.717 0.362 -0.533 0.105 -0.076 D 208 204 6 209 4 0 0 22 46 -5.301 -4.982 -1.663 -0.673 IL 209 209 5 209 4 1 1 26 50 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 210 210 6 210 3 1 1 25 49 -1.107 -0.964 -5.418 0.000 0.000 0.000 0.000 [ MATL 54 ] 121 - a - - - ML 211 210 6 213 3 1 1 16 35 -8.144 -0.042 -5.302 0.401 -0.402 -0.544 0.307 D 212 210 6 213 3 0 0 15 34 -7.148 -1.142 -0.889 IL 213 213 3 213 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 122 - u - - - ML 214 213 3 216 3 1 1 15 33 -8.200 -0.037 -5.529 0.111 -0.146 -0.394 0.328 D 215 213 3 216 3 0 0 14 33 -6.813 -1.571 -0.611 IL 216 216 3 216 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 123 - u - - - ML 217 216 3 219 3 1 1 13 31 -8.209 -0.037 -5.515 0.269 -0.500 -0.351 0.382 D 218 216 3 219 3 0 0 13 31 -6.744 -0.901 -1.136 IL 219 219 3 219 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 124 - a - - - ML 220 219 3 222 2 1 1 1 1 * 0.000 0.561 -0.496 -0.537 0.171 D 221 219 3 222 2 0 0 0 0 * 0.000 IL 222 222 3 222 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 58 ] - - - - - - E 223 222 3 -1 0 0 0 0 0 [ BEGR 59 ] - - - - - - S 224 179 1 225 3 0 0 105 206 -8.272 -0.023 -6.285 IL 225 225 2 225 3 1 1 106 207 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 134 - A - - - ML 226 225 2 228 5 1 1 105 206 -7.359 -0.032 -7.174 -7.387 -8.278 1.822 -2.981 -2.553 -2.586 D 227 225 2 228 5 0 0 103 203 -5.002 -0.845 -4.263 -2.638 -2.326 IL 228 228 3 228 5 1 1 105 206 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 135 225 g c - - MP 229 228 3 233 6 2 2 104 205 -9.239 -9.178 -0.019 -7.954 -8.234 -8.629 -3.751 -2.578 -3.770 1.464 -4.549 -4.644 -0.035 -4.124 -3.779 2.795 -4.215 1.784 -0.292 -3.898 -1.983 -2.650 ML 230 228 3 233 6 1 1 102 202 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 231 228 3 233 6 1 1 101 202 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 232 228 3 233 6 0 0 97 198 -9.105 -7.803 -3.600 -4.282 -4.300 -0.306 IL 233 233 5 233 6 1 1 103 204 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 234 234 6 234 5 1 1 103 204 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 62 ] 136 224 C G - - MP 235 234 6 239 6 2 2 102 203 -9.239 -9.178 -0.019 -7.954 -8.234 -8.629 -4.143 -4.108 -3.944 -0.291 -2.738 -4.448 3.213 -3.497 -3.954 -0.093 -4.306 -2.071 1.405 -4.244 0.387 -2.796 ML 236 234 6 239 6 1 1 100 201 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 237 234 6 239 6 1 1 99 200 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 238 234 6 239 6 0 0 95 196 -9.105 -7.803 -3.600 -4.282 -4.300 -0.306 IL 239 239 5 239 6 1 1 101 202 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 240 240 6 240 5 1 1 101 202 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 63 ] 137 223 a u - - MP 241 240 6 245 6 2 2 100 201 -9.239 -9.178 -0.019 -7.954 -8.234 -8.629 -3.592 -2.583 -3.651 2.763 -4.286 -4.778 0.053 -3.921 -3.618 2.208 -4.127 0.628 -0.198 -3.935 -1.859 -2.524 ML 242 240 6 245 6 1 1 98 199 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 243 240 6 245 6 1 1 97 198 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 244 240 6 245 6 0 0 93 194 -9.105 -7.803 -3.600 -4.282 -4.300 -0.306 IL 245 245 5 245 6 1 1 99 200 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 246 246 6 246 5 1 1 99 200 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 64 ] 138 222 G C - - MP 247 246 6 251 6 2 2 98 199 -9.239 -9.178 -0.019 -7.954 -8.234 -8.629 -5.114 -3.271 -5.254 -0.030 -6.018 -4.880 -1.200 -5.603 -4.602 3.711 -4.916 -0.648 -1.504 -4.713 -3.262 -4.129 ML 248 246 6 251 6 1 1 96 197 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 249 246 6 251 6 1 1 95 196 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 250 246 6 251 6 0 0 92 193 -9.105 -7.803 -3.600 -4.282 -4.300 -0.306 IL 251 251 5 251 6 1 1 97 198 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 252 252 6 252 5 1 1 97 198 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 65 ] 139 221 a u - - MP 253 252 6 257 6 2 2 96 197 -9.239 -9.178 -0.028 -6.599 -8.234 -8.629 -3.255 -0.683 -3.304 2.465 -3.776 -4.197 0.361 -3.671 -3.391 2.377 -3.862 0.078 0.122 -3.430 -1.473 -2.294 ML 254 252 6 257 6 1 1 94 195 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 255 252 6 257 6 1 1 94 194 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 256 252 6 257 6 0 0 91 192 -9.105 -7.803 -3.600 -4.282 -4.300 -0.306 IL 257 257 5 257 6 1 1 95 196 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 258 258 6 258 5 1 1 95 196 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 66 ] 140 220 u a - - MP 259 258 6 263 4 2 2 94 195 -7.248 -7.455 -0.043 -5.869 -0.129 -1.807 -1.800 1.107 -1.214 -2.650 1.502 -2.132 -1.065 0.957 -2.173 -0.462 1.845 -1.941 0.008 -1.056 ML 260 258 6 263 4 1 1 93 194 -3.853 -4.035 -0.469 -2.765 0.631 -0.565 -0.267 -0.083 MR 261 258 6 263 4 1 1 92 193 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 262 258 6 263 4 0 0 90 191 -4.621 -4.302 -2.318 -0.498 IL 263 263 5 263 4 1 1 94 195 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 264 264 6 264 3 1 1 93 194 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 141 - u - - - ML 265 264 6 267 3 1 1 92 193 -8.265 -0.046 -5.157 0.172 -0.701 -0.140 0.433 D 266 264 6 267 3 0 0 89 190 -6.248 -1.761 -0.532 IL 267 267 3 267 3 1 1 93 193 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 142 - a - - - ML 268 267 3 270 3 1 1 91 192 -8.236 -0.037 -5.503 0.339 -0.584 -0.056 0.144 D 269 267 3 270 3 0 0 87 188 -6.528 -2.041 -0.423 IL 270 270 3 270 3 1 1 92 192 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 143 - u - - - ML 271 270 3 273 3 1 1 90 191 -8.216 -0.061 -4.716 0.237 -0.721 -0.204 0.429 D 272 270 3 273 3 0 0 86 187 -6.690 -2.203 -0.371 IL 273 273 3 273 3 1 1 91 192 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 144 - u - - - ML 274 273 3 276 3 1 1 89 190 -8.173 -0.135 -3.545 0.330 -0.582 -0.372 0.381 D 275 273 3 276 3 0 0 84 185 -6.985 -2.498 -0.295 IL 276 276 3 276 3 1 1 90 191 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 145 - u - - - ML 277 276 3 279 3 1 1 89 189 -8.058 -0.139 -3.501 0.358 -0.528 -0.511 0.404 D 278 276 3 279 3 0 0 82 183 -7.539 -3.052 -0.194 IL 279 279 3 279 3 1 1 89 190 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 146 - u - - - ML 280 279 3 282 3 1 1 88 189 -7.939 -0.172 -3.210 0.198 -0.335 -0.484 0.427 D 281 279 3 282 3 0 0 81 182 -7.920 -3.433 -0.147 IL 282 282 3 282 3 1 1 89 190 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 147 - a - - - ML 283 282 3 285 3 1 1 87 188 -7.791 -0.075 -4.429 0.448 -0.225 -0.720 0.230 D 284 282 3 285 3 0 0 79 180 -8.259 -3.149 -0.178 IL 285 285 3 285 3 1 1 88 189 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 74 ] 148 - a - - - ML 286 285 3 288 3 1 1 87 188 -7.770 -0.039 -5.504 0.349 -0.355 -0.557 0.339 D 287 285 3 288 3 0 0 77 178 -8.299 -3.177 -0.174 IL 288 288 3 288 3 1 1 87 188 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 75 ] 149 - a - - - ML 289 288 3 291 3 1 1 86 187 -7.785 -0.023 -6.439 0.262 -0.175 -0.440 0.237 D 290 288 3 291 3 0 0 72 173 -8.269 -3.437 -0.145 IL 291 291 3 291 3 1 1 86 187 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 76 ] 150 - a - - - ML 292 291 3 294 3 1 1 85 186 -1.816 -0.505 -6.454 0.534 -0.474 -0.354 0.070 D 293 291 3 294 3 0 0 59 160 -8.241 -0.396 -2.077 IL 294 294 3 294 3 1 1 91 192 -0.263 -2.652 -7.001 0.000 0.000 0.000 0.000 [ MATL 77 ] 218 - a - - - ML 295 294 3 297 3 1 1 13 31 -8.231 -0.017 -6.885 0.956 -0.894 -0.407 -0.381 D 296 294 3 297 3 0 0 13 31 -6.571 -1.648 -0.577 IL 297 297 3 297 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 78 ] 219 - c - - - ML 298 297 3 300 2 1 1 1 1 * 0.000 -0.319 0.564 -0.907 0.248 D 299 297 3 300 2 0 0 0 0 * 0.000 IL 300 300 3 300 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 79 ] - - - - - - E 301 300 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME NiCo ACC RF02683 DESC NiCo riboswitch LENG 96 MAXL 267 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Oct 23 01:23:25 2022 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED NSEQ 83 EFFN 7.211334 CKSUM 540905899 STATS LOCAL MSV -8.9965 0.71864 STATS LOCAL VITERBI -10.2141 0.71864 STATS LOCAL FORWARD -3.6427 0.71864 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.35968 1.45685 1.19656 1.56995 1.38629 1.38629 1.38629 1.38629 0.02234 4.50560 4.50560 1.46634 0.26236 0.00000 * 1 0.43124 2.22854 2.45910 1.85086 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.02234 4.50560 4.50560 1.46634 0.26236 1.09861 0.40547 2 2.14922 0.41718 3.25831 1.68164 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.02234 4.50560 4.50560 1.46634 0.26236 1.09861 0.40547 3 0.23989 2.87638 2.51834 2.57236 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.02234 4.50560 4.50560 1.46634 0.26236 1.09861 0.40547 4 1.88897 2.64722 0.44820 1.97223 4 G - - : 1.38629 1.38629 1.38629 1.38629 0.02186 4.52725 4.52725 1.46634 0.26236 1.09861 0.40547 5 2.75282 1.87354 3.04699 0.30765 5 U - - : 1.38629 1.38629 1.38629 1.38629 0.02186 4.52725 4.52725 1.46634 0.26236 1.09861 0.40547 6 0.44443 2.36905 2.13743 1.91538 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.02159 4.53951 4.53951 1.46634 0.26236 1.09861 0.40547 7 2.10989 0.52096 2.93812 1.46174 7 C - - : 1.38629 1.38629 1.38629 1.38629 0.02159 4.53951 4.53951 1.46634 0.26236 1.09861 0.40547 8 0.33968 2.92137 2.10661 2.18485 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.03833 4.53951 3.61471 1.46634 0.26236 1.09861 0.40547 9 0.23366 2.82860 2.76781 2.44792 9 A - - : 1.38629 1.38629 1.38629 1.38629 0.02195 4.52313 4.52313 1.46634 0.26236 0.58401 0.81567 10 0.90854 1.70413 1.76341 1.41265 10 a - - ( 1.38629 1.38629 1.38629 1.38629 0.04173 3.50030 4.53951 0.60107 0.79457 1.09861 0.40547 11 1.99393 0.70764 1.92324 1.49208 12 c - - ( 1.38629 1.38629 1.38629 1.38629 0.02159 4.53951 4.53951 1.46634 0.26236 1.09861 0.40547 12 1.89300 1.69049 1.71996 0.72180 13 u - - ( 1.38629 1.38629 1.38629 1.38629 0.02159 4.53951 4.53951 1.46634 0.26236 1.09861 0.40547 13 2.83665 4.27709 0.09173 4.19040 14 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02159 4.53951 4.53951 1.46634 0.26236 1.09861 0.40547 14 0.03675 4.62179 4.24801 4.42675 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.02159 4.53951 4.53951 1.46634 0.26236 1.09861 0.40547 15 1.43260 2.55811 0.80596 1.43884 16 g - - - 1.38629 1.38629 1.38629 1.38629 0.02159 4.53951 4.53951 1.46634 0.26236 1.09861 0.40547 16 4.69357 0.05352 4.63469 3.40370 17 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02159 4.53951 4.53951 1.46634 0.26236 1.09861 0.40547 17 0.03675 4.62179 4.24801 4.42675 18 A - - , 1.38629 1.38629 1.38629 1.38629 0.02159 4.53951 4.53951 1.46634 0.26236 1.09861 0.40547 18 3.10672 4.11178 0.08297 3.99049 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.02159 4.53951 4.53951 1.46634 0.26236 1.09861 0.40547 19 2.27745 4.01171 0.15215 3.88788 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.02140 4.54825 4.54825 1.46634 0.26236 1.09861 0.40547 20 3.92738 0.18972 3.78361 2.03735 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.02140 4.54825 4.54825 1.46634 0.26236 1.09861 0.40547 21 1.64208 1.34765 1.18011 1.42992 22 g - - < 1.38629 1.38629 1.38629 1.38629 0.09497 2.98658 3.21538 0.37707 1.15795 1.09861 0.40547 22 1.17049 1.91850 1.05423 1.63734 24 g - - < 1.38629 1.38629 1.38629 1.38629 0.03005 3.97962 4.51825 0.92523 0.50491 1.75647 0.18953 23 2.08543 1.32207 1.76555 0.82537 26 u - - < 1.38629 1.38629 1.38629 1.38629 0.07204 4.51825 2.83713 1.46634 0.26236 1.75647 0.18953 24 1.54342 2.44588 0.52690 2.21395 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.02317 4.46939 4.46939 1.46634 0.26236 2.31881 0.10357 25 1.29764 1.45276 1.33824 1.46711 28 a - - < 1.38629 1.38629 1.38629 1.38629 0.02317 4.46939 4.46939 1.46634 0.26236 2.31881 0.10357 26 1.26697 1.36965 1.64000 1.30881 29 a - - < 1.38629 1.38629 1.38629 1.38629 0.13006 4.46939 2.20273 1.46634 0.26236 2.31881 0.10357 27 1.71004 1.16278 1.60294 1.18672 30 c - - < 1.38629 1.38629 1.38629 1.38629 0.07015 4.36509 2.89986 1.46634 0.26236 2.33438 0.10189 28 1.36226 1.52722 1.43788 1.24012 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02661 4.33271 4.33271 1.46634 0.26236 2.13470 0.12588 29 1.52495 1.52708 1.94186 0.86331 32 u - - _ 1.38629 1.38629 1.38629 1.38629 0.12678 2.49618 3.30562 0.65005 0.73819 0.67377 0.71291 30 1.08764 1.97071 1.66152 1.09727 37 a - - _ 1.38629 1.38629 1.38629 1.38629 0.20480 4.44164 1.75209 1.46634 0.26236 1.49161 0.25491 31 1.21482 1.97180 1.83336 0.90595 38 u - - _ 1.38629 1.38629 1.38629 1.38629 0.10673 4.29065 2.43569 1.46634 0.26236 1.18106 0.36666 32 1.08242 1.76986 1.79211 1.12621 39 a - - _ 1.38629 1.38629 1.38629 1.38629 1.10078 0.71147 1.73463 2.29349 0.10638 2.22531 0.11433 33 0.80283 2.31661 1.17390 1.93672 97 a - - _ 1.38629 1.38629 1.38629 1.38629 0.15427 4.15212 2.06175 1.46634 0.26236 0.63028 0.76024 34 0.94114 2.23256 1.22301 1.56916 98 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02758 4.29769 4.29769 1.46634 0.26236 0.52799 0.89108 35 1.34480 1.76777 1.10913 1.43192 99 g - - > 1.38629 1.38629 1.38629 1.38629 0.10779 3.53905 2.61536 0.66528 0.72182 0.32521 1.28147 36 1.49158 1.79593 1.14933 1.23045 101 g - - > 1.38629 1.38629 1.38629 1.38629 0.02296 4.47877 4.47877 1.46634 0.26236 2.23445 0.11323 37 1.66399 1.55410 1.27079 1.14373 102 u - - > 1.38629 1.38629 1.38629 1.38629 0.02296 4.47877 4.47877 1.46634 0.26236 2.23445 0.11323 38 2.35686 0.65702 2.22240 1.27820 103 C - - > 1.38629 1.38629 1.38629 1.38629 0.02296 4.47877 4.47877 1.46634 0.26236 0.55332 0.85575 39 1.09411 1.92858 1.01724 1.84379 104 g - - > 1.38629 1.38629 1.38629 1.38629 0.02186 4.52718 4.52718 1.46634 0.26236 1.60336 0.22467 40 1.77375 1.62788 1.61230 0.83349 105 u - - > 1.38629 1.38629 1.38629 1.38629 0.07532 4.52718 2.78478 1.46634 0.26236 1.60336 0.22467 41 2.40845 3.09100 0.21039 2.91282 106 G - - - 1.38629 1.38629 1.38629 1.38629 0.06036 3.45267 3.61498 0.61006 0.78377 1.57511 0.23191 42 1.81620 1.67246 0.64858 2.06527 108 G - - - 1.38629 1.38629 1.38629 1.38629 0.02314 4.47081 4.47081 1.46634 0.26236 0.22215 1.61343 43 1.21083 1.92950 1.05307 1.57040 109 g - - > 1.38629 1.38629 1.38629 1.38629 0.02140 4.54825 4.54825 1.46634 0.26236 1.09861 0.40547 44 2.19490 3.91143 0.17090 3.66074 110 G - - > 1.38629 1.38629 1.38629 1.38629 0.02140 4.54825 4.54825 1.46634 0.26236 1.09861 0.40547 45 3.99376 0.17553 3.80509 2.11773 111 C - - > 1.38629 1.38629 1.38629 1.38629 0.03171 3.88138 4.54825 0.82937 0.57328 1.09861 0.40547 46 4.03343 0.19160 3.88566 1.99423 113 C - - > 1.38629 1.38629 1.38629 1.38629 0.02140 4.54825 4.54825 1.46634 0.26236 1.09861 0.40547 47 4.00039 5.01807 0.03657 4.51140 114 G - - , 1.38629 1.38629 1.38629 1.38629 0.02140 4.54825 4.54825 1.46634 0.26236 1.09861 0.40547 48 4.01232 5.03146 0.03612 4.52317 115 G - - , 1.38629 1.38629 1.38629 1.38629 0.02121 4.55680 4.55680 1.46634 0.26236 1.09861 0.40547 49 2.94374 4.30715 0.08454 4.20471 116 G - - < 1.38629 1.38629 1.38629 1.38629 0.02121 4.55680 4.55680 1.46634 0.26236 1.09861 0.40547 50 3.64779 0.33472 3.46864 1.48170 117 C - - < 1.38629 1.38629 1.38629 1.38629 0.03900 4.55680 3.58451 1.46634 0.26236 1.09861 0.40547 51 2.74313 0.44412 2.92429 1.42487 118 C - - < 1.38629 1.38629 1.38629 1.38629 0.05868 4.53940 3.07246 1.46634 0.26236 1.53557 0.24249 52 1.57623 2.33157 0.53572 2.19954 119 G - - < 1.38629 1.38629 1.38629 1.38629 0.09219 4.50312 2.56398 1.46634 0.26236 2.07693 0.13389 53 2.16472 0.77810 1.89794 1.28712 120 c - - < 1.38629 1.38629 1.38629 1.38629 0.07496 4.43492 2.80744 1.46634 0.26236 0.87997 0.53579 54 1.06395 1.70657 1.80966 1.17211 121 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04599 4.44305 3.40569 1.46634 0.26236 0.61599 0.77676 55 1.34874 1.44155 1.64604 1.16777 122 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04000 4.49274 3.57485 1.46634 0.26236 1.00376 0.45649 56 1.18774 1.81452 1.61620 1.09805 123 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04013 4.50123 3.56684 1.46634 0.26236 0.28155 1.40491 57 0.92668 1.79150 1.81245 1.29400 124 a - - _ 1.38629 1.38629 1.38629 1.38629 0.55904 1.16789 2.14370 0.77987 0.61335 0.57978 0.82103 58 1.59174 2.04305 0.69666 1.78053 129 g - - > 1.38629 1.38629 1.38629 1.38629 0.02373 4.44607 4.44607 1.46634 0.26236 0.62483 0.76647 59 2.52063 0.66736 2.14658 1.23910 130 C - - > 1.38629 1.38629 1.38629 1.38629 0.02230 4.50740 4.50740 1.46634 0.26236 0.72984 0.65775 60 2.06215 3.09372 0.28565 2.57748 131 G - - > 1.38629 1.38629 1.38629 1.38629 0.02172 4.53342 4.53342 1.46634 0.26236 0.56328 0.84243 61 1.61216 3.62484 0.29996 3.40986 132 G - - > 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 62 4.34585 0.10467 4.17275 2.64490 133 C - - > 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 63 0.03606 4.64056 4.26606 4.44543 134 A - - , 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 64 1.74296 3.46365 0.28074 3.25811 135 G - - < 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 65 3.60642 0.33238 3.40471 1.50320 136 C - - < 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 66 0.51300 3.71538 1.06232 3.46404 137 A - - < 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 67 3.41445 4.46135 0.05857 4.38668 138 G - - < 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 68 0.56976 3.27727 1.04894 3.07273 139 A - - < 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 69 1.42836 1.58394 1.64946 1.01341 140 u - - < 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 70 1.28712 2.04403 1.41940 1.04250 141 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04746 4.55093 3.32993 1.46634 0.26236 1.09861 0.40547 71 1.13436 1.87519 1.35840 1.31687 142 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03994 4.52537 3.56404 1.46634 0.26236 1.68465 0.20519 72 1.22134 2.07174 1.48073 1.04490 143 u - - _ 1.38629 1.38629 1.38629 1.38629 0.06196 4.50772 3.01478 1.46634 0.26236 1.94673 0.15401 73 1.12996 1.90713 1.64043 1.09497 144 u - - _ 1.38629 1.38629 1.38629 1.38629 0.13117 4.46894 2.19400 1.46634 0.26236 2.34716 0.10053 74 1.09805 1.85278 1.77329 1.07909 145 u - - _ 1.38629 1.38629 1.38629 1.38629 0.13991 4.36357 2.13847 1.46634 0.26236 2.95404 0.05354 75 1.24795 1.64119 1.73459 1.07094 146 u - - _ 1.38629 1.38629 1.38629 1.38629 0.17758 4.25252 1.90733 1.46634 0.26236 3.31192 0.03713 76 1.01301 1.51132 2.01132 1.26427 147 a - - _ 1.38629 1.38629 1.38629 1.38629 0.08654 4.10837 2.71103 1.46634 0.26236 2.58455 0.07843 77 1.10629 1.65485 1.82266 1.15043 148 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04976 4.08739 3.44960 1.46634 0.26236 2.60380 0.07687 78 1.19985 1.45977 1.70232 1.25803 149 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03361 4.10287 4.10287 1.46634 0.26236 2.97869 0.05220 79 0.95163 1.75346 1.64033 1.39917 150 a - - _ 1.38629 1.38629 1.38629 1.38629 0.56514 0.87843 4.11751 2.36504 0.09866 0.14200 2.02206 80 0.58452 2.19184 1.71469 1.89118 218 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02200 4.52084 4.52084 1.46634 0.26236 0.98746 0.46605 81 1.85040 0.79903 2.16700 1.27819 219 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02172 4.53342 4.53342 1.46634 0.26236 1.53557 0.24249 82 0.81212 1.99453 1.45241 1.68202 220 a - - > 1.38629 1.38629 1.38629 1.38629 0.02172 4.53342 4.53342 1.46634 0.26236 0.56328 0.84243 83 3.30962 1.03707 3.07373 0.57496 221 U - - > 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 84 4.50489 0.08689 4.33075 2.83004 222 C - - > 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 85 3.67771 1.40279 3.50059 0.35863 223 U - - > 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 86 1.93360 3.56403 0.23295 3.35655 224 G - - > 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 87 3.49446 0.81515 3.25744 0.71626 225 u - - > 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 88 4.00413 5.02226 0.03643 4.51509 226 G - - , 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 89 3.11753 4.53917 0.07383 4.12165 227 G - - , 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 90 3.55288 4.57422 0.05423 4.28102 228 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 91 0.03606 4.64056 4.26606 4.44543 229 A - - - 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 92 4.26528 0.08544 4.11272 2.96657 230 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 93 0.80638 1.93132 1.48092 1.70845 231 a - - ) 1.38629 1.38629 1.38629 1.38629 0.04281 3.46246 4.55093 0.57565 0.82631 1.09861 0.40547 94 1.67811 2.24497 0.61420 1.79416 233 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 95 1.63822 1.94530 1.55480 0.79518 234 u - - ) 1.38629 1.38629 1.38629 1.38629 0.02134 4.55093 4.55093 1.46634 0.26236 1.09861 0.40547 96 0.85351 2.20330 1.49673 1.42803 235 a - - : 1.38629 1.38629 1.38629 1.38629 0.07583 2.61699 * 1.56241 0.23525 0.00000 * //