INFERNAL1/a [1.1.4 | Dec 2020] NAME group-II-D1D4-1 ACC RF01998 DESC Group II catalytic intron D1-D4-1 STATES 266 NODES 72 CLEN 84 W 189 ALPH RNA RF no CONS yes MAP yes DATE Wed Mar 5 14:00:09 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 237 EFFN 5.174973 CKSUM 3412095367 NULL 0.000 0.000 0.000 0.000 GA 35.00 TC 35.00 NC 34.90 EFP7GF -13.7545 0.71860 ECMLC 0.74025 -8.15989 0.21342 1600000 590302 0.002033 ECMGC 0.39261 -16.99759 -5.72415 1600000 33439 0.011962 ECMLI 0.52566 -9.55999 1.65427 1600000 435829 0.002753 ECMGI 0.42961 -11.38147 -1.20157 1600000 31724 0.012609 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 3 0 1 189 312 -6.402 -16.872 -0.017 IL 1 1 2 1 3 9 39 193 316 -0.610 -4.491 -1.736 0.000 0.000 0.000 0.000 IR 2 2 3 2 2 8 38 191 314 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 1 ] - - - - - - B 3 2 3 118 4 7 36 189 313 [ BEGR 42 ] - - - - - - S 4 3 1 5 5 0 2 142 266 -7.898 -0.022 -7.714 -7.926 -8.817 IL 5 5 2 5 5 1 1 143 267 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 72 175 G C - - MP 6 5 2 10 6 2 4 143 266 -9.542 -9.482 -0.016 -8.258 -8.538 -8.933 -4.639 -3.106 -4.564 0.414 -5.494 -4.770 -0.442 -5.137 -3.800 3.579 -4.244 -0.545 -0.774 -4.271 -2.658 -3.509 ML 7 5 2 10 6 1 1 140 264 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 2 10 6 1 1 140 263 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 2 10 6 0 0 137 260 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 1 142 265 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 1 141 265 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 73 174 c g - - MP 12 11 6 16 6 2 3 141 264 -9.542 -9.482 -0.018 -7.756 -8.538 -8.933 -3.582 -3.466 -3.641 0.348 -2.422 -4.449 2.573 -3.120 -3.596 1.425 -4.111 -1.346 1.980 -3.811 -0.398 -2.472 ML 13 11 6 16 6 1 1 139 262 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 1 138 262 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 0 136 259 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 1 140 263 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 1 140 263 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 74 173 C G - - MP 18 17 6 22 4 2 2 139 262 -7.887 -8.094 -0.027 -6.508 -7.173 -7.259 -6.413 -3.423 -4.861 -4.978 3.925 -6.094 -6.784 -3.285 -6.498 -5.344 -1.779 -7.145 -2.761 -5.588 ML 19 17 6 22 4 1 1 137 261 -3.784 -3.966 -0.496 -2.696 0.320 -0.245 -0.288 0.123 MR 20 17 6 22 4 1 1 136 260 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 21 17 6 22 4 0 0 135 259 -4.568 -4.250 -2.265 -0.520 IL 22 22 5 22 4 1 1 138 262 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 23 23 6 23 3 1 1 138 261 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 75 - A - - - ML 24 23 6 26 3 1 1 137 260 -8.856 -0.011 -7.510 1.533 -2.587 -0.476 -2.183 D 25 23 6 26 3 0 0 134 257 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 1 137 260 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 76 - U - - - ML 27 26 3 29 3 1 1 136 259 -8.856 -0.029 -5.821 -2.260 -2.349 -3.216 1.802 D 28 26 3 29 3 0 0 133 257 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 1 136 259 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 77 - A - - - ML 30 29 3 32 3 1 1 135 258 -8.839 -0.016 -6.865 1.881 -3.456 -3.001 -3.301 D 31 29 3 32 3 0 0 132 256 -6.449 -1.218 -0.840 IL 32 32 3 32 3 1 1 135 258 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 78 - G - - - ML 33 32 3 35 3 1 1 134 257 -8.852 -0.013 -7.166 -2.574 -3.800 1.871 -3.269 D 34 32 3 35 3 0 0 131 255 -6.246 -1.759 -0.532 IL 35 35 3 35 3 1 1 134 257 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 79 - U - - - ML 36 35 3 38 3 1 1 133 256 -8.850 -0.011 -7.504 -2.287 -2.191 -2.802 1.779 D 37 35 3 38 3 0 0 130 254 -6.280 -1.793 -0.517 IL 38 38 3 38 3 1 1 133 256 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 80 - A - - - ML 39 38 3 41 3 1 1 132 255 -5.626 -0.038 -7.514 1.902 -3.685 -3.368 -3.521 D 40 38 3 41 3 0 0 130 253 -5.685 -0.799 -1.301 IL 41 41 3 41 3 1 1 132 255 -2.074 -0.490 -4.312 0.000 0.000 0.000 0.000 [ MATR 52 ] - 172 - G - - MR 42 41 3 44 3 1 1 131 254 -9.196 -0.012 -7.249 -1.788 -2.889 1.765 -2.504 D 43 41 3 44 3 0 0 128 251 -6.480 -1.484 -0.664 IR 44 44 3 44 3 1 1 131 254 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 53 ] - 171 - A - - MR 45 44 3 47 3 1 1 130 253 -6.096 -0.029 -7.517 1.770 -2.415 -2.248 -2.381 D 46 44 3 47 3 0 0 127 250 -6.443 -1.621 -0.592 IR 47 47 3 47 3 1 1 130 253 -1.764 -0.606 -4.367 0.000 0.000 0.000 0.000 [ MATR 54 ] - 168 - A - - MR 48 47 3 50 3 1 1 129 252 -9.199 -0.013 -7.125 1.840 -3.053 -2.755 -2.727 D 49 47 3 50 3 0 0 126 249 -6.443 -1.621 -0.592 IR 50 50 3 50 3 1 1 129 252 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 55 ] - 167 - G - - MR 51 50 3 53 5 1 1 128 251 -7.892 -0.022 -7.708 -7.920 -8.812 -1.269 -2.428 1.677 -2.315 D 52 50 3 53 5 0 0 125 248 -5.402 -0.757 -2.927 -4.459 -2.267 IR 53 53 3 53 5 1 1 127 251 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 82 166 g c - - MP 54 53 3 58 6 2 2 127 250 -7.489 -9.478 -0.026 -7.742 -8.534 -8.288 -3.174 -2.451 -3.025 0.957 -3.298 -3.945 1.768 -3.533 -3.228 2.405 -3.407 1.085 0.604 -3.244 -0.921 -2.256 ML 55 53 3 58 6 1 1 123 247 -6.267 -6.613 -1.327 -1.022 -6.463 -3.751 0.345 -0.313 -0.242 0.110 MR 56 53 3 58 6 1 1 123 246 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 3 58 6 0 0 117 240 -9.108 -7.806 -3.603 -4.285 -4.303 -0.305 IL 58 58 5 58 6 1 1 126 249 -2.658 -2.921 -0.708 -4.576 -5.352 -5.012 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 1 125 249 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 84 165 c g - - MP 60 59 6 64 6 2 2 125 248 -9.535 -9.474 -0.018 -8.251 -8.531 -8.094 -2.259 -2.303 -2.432 0.890 -1.935 -3.282 2.280 -2.647 -2.138 1.035 -2.915 -0.843 1.774 -1.604 0.166 -1.593 ML 61 59 6 64 6 1 1 121 244 -6.286 -6.632 -1.259 -1.041 -6.482 -4.011 0.317 -0.372 -0.249 0.189 MR 62 59 6 64 6 1 1 120 243 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 114 237 -9.163 -7.862 -3.659 -4.341 -4.358 -0.292 IL 64 64 5 64 6 1 1 123 247 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 123 247 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 85 164 c g - - MP 66 65 6 70 6 2 2 123 246 -2.651 -6.415 -0.309 -8.251 -8.530 -5.986 -1.936 -2.041 -2.336 1.003 -2.016 -3.181 2.045 -2.593 -1.142 1.621 -2.950 -0.751 1.519 -2.475 -0.008 -1.522 ML 67 65 6 70 6 1 1 116 239 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 115 239 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 111 234 -9.211 -7.910 -3.707 -4.389 -4.406 -0.282 IL 70 70 5 70 6 1 1 130 253 -0.251 -3.167 -4.542 -8.686 -9.463 -9.123 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 117 240 -0.856 -1.758 -6.810 -6.277 -2.943 0.000 0.000 0.000 0.000 [ MATP 59 ] 104 156 g c - - MP 72 71 6 76 6 2 2 116 239 -7.582 -9.342 -0.045 -8.119 -8.398 -5.867 -2.767 -2.540 -2.774 1.448 -2.704 -3.671 1.914 -3.080 -2.954 2.049 -3.097 -0.362 1.200 -2.964 -0.307 -1.779 ML 73 71 6 76 6 1 1 114 237 -6.326 -6.672 -1.205 -1.081 -6.522 -4.051 0.360 -0.535 0.109 -0.077 MR 74 71 6 76 6 1 1 113 236 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 110 233 -10.653 -9.352 -2.218 -5.831 -5.848 -0.419 IL 76 76 5 76 6 1 1 115 238 -2.643 -2.906 -0.824 -4.561 -5.337 -3.748 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 115 238 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 106 155 c g - - MP 78 77 6 82 6 2 2 114 237 -9.420 -9.359 -0.038 -8.136 -8.416 -5.942 -2.419 -2.452 -2.572 1.353 -2.340 -3.281 2.030 -2.763 -2.617 1.449 -2.185 -0.574 1.681 -2.705 -0.117 -1.692 ML 79 77 6 82 6 1 1 112 235 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 111 234 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 108 231 -10.565 -9.263 -2.203 -5.742 -5.760 -0.428 IL 82 82 5 82 6 1 1 113 236 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 113 236 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 107 154 c g - - MP 84 83 6 88 4 2 2 112 235 -6.103 -6.565 -0.118 -4.234 -1.873 -1.573 -1.187 1.255 -1.931 -2.670 1.881 -2.374 -2.124 1.435 -2.688 -0.460 1.483 -2.145 0.013 -1.234 ML 85 83 6 88 4 1 1 111 234 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 4 1 1 108 232 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 87 83 6 88 4 0 0 106 230 -5.898 -4.359 -2.378 -0.430 IL 88 88 5 88 4 1 1 112 235 -1.785 -2.018 -1.216 -4.953 0.000 0.000 0.000 0.000 IR 89 89 6 89 3 1 1 111 234 -1.557 -0.718 -4.257 0.000 0.000 0.000 0.000 [ MATL 62 ] 109 - u - - - ML 90 89 6 92 3 1 1 110 233 -1.403 -0.824 -4.134 0.156 -0.524 -0.161 0.374 D 91 89 6 92 3 0 0 104 227 -2.418 -0.978 -1.712 IL 92 92 3 92 3 1 1 115 239 -0.216 -3.757 -3.946 0.000 0.000 0.000 0.000 [ MATL 63 ] 137 - g - - - ML 93 92 3 95 3 1 1 41 82 -8.369 -0.016 -7.023 -0.127 -0.979 0.852 -0.373 D 94 92 3 95 3 0 0 38 79 -8.739 -2.001 -0.419 IL 95 95 3 95 3 1 1 42 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 138 - u - - - ML 96 95 3 98 3 1 1 40 81 -8.501 -0.027 -5.973 0.038 -0.243 -0.716 0.604 D 97 95 3 98 3 0 0 37 78 -8.422 -2.640 -0.257 IL 98 98 3 98 3 1 1 41 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 139 - a - - - ML 99 98 3 101 3 1 1 39 80 -8.536 -0.084 -4.220 0.636 -0.607 -0.053 -0.276 D 100 98 3 101 3 0 0 37 78 -8.317 -2.048 -0.405 IL 101 101 3 101 3 1 1 40 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 140 - a - - - ML 102 101 3 104 3 1 1 38 79 -8.548 -0.159 -3.296 0.970 -0.604 -0.813 -0.298 D 103 101 3 104 3 0 0 36 77 -8.279 -3.617 -0.128 IL 104 104 3 104 3 1 1 39 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 141 - u - - - ML 105 104 3 107 3 1 1 37 78 -8.409 -0.180 -3.128 0.300 -0.437 -0.440 0.371 D 106 104 3 107 3 0 0 36 77 -8.654 -4.167 -0.086 IL 107 107 3 107 3 1 1 38 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 142 - a - - - ML 108 107 3 110 3 1 1 36 77 -2.037 -0.557 -3.702 0.250 -0.359 0.026 0.018 D 109 107 3 110 3 0 0 36 77 -1.213 -3.015 -1.169 IL 110 110 3 110 3 1 1 38 79 -0.652 -1.501 -6.643 0.000 0.000 0.000 0.000 [ MATL 69 ] 151 - c - - - ML 111 110 3 113 3 1 1 13 31 -8.561 -0.014 -7.215 0.056 0.190 -0.386 0.076 D 112 110 3 113 3 0 0 12 30 -8.235 -1.090 -0.925 IL 113 113 3 113 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 152 - a - - - ML 114 113 3 116 2 1 1 1 1 * 0.000 0.290 -0.347 -0.049 0.035 D 115 113 3 116 2 0 0 0 0 * 0.000 IL 116 116 3 116 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 71 ] - - - - - - E 117 116 3 -1 0 0 0 0 0 [ BEGL 2 ] - - - - - - S 118 3 1 119 1 0 9 75 110 0.000 [ BIF 3 ] - - - - - - B 119 118 1 120 200 0 9 75 110 [ BEGL 4 ] - - - - - - S 120 119 1 121 4 0 0 43 64 -0.044 -7.385 -5.779 -7.432 [ MATP 5 ] 1 43 c g - - MP 121 120 1 125 6 2 2 43 64 -9.531 -9.471 -0.016 -8.247 -8.527 -8.922 -2.475 -2.581 -1.913 0.846 -2.341 -3.259 2.514 -2.359 -2.663 0.820 -3.018 -0.881 1.310 -2.783 0.894 -1.701 ML 122 120 1 125 6 1 1 42 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 123 120 1 125 6 1 1 42 63 -7.148 -5.877 -1.339 -5.855 -0.989 -4.069 0.261 -0.619 0.307 -0.130 D 124 120 1 125 6 0 0 40 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 125 125 5 125 6 1 1 42 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 126 126 6 126 5 1 1 42 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 2 42 a u - - MP 127 126 6 131 4 2 2 41 62 -7.890 -8.097 -0.082 -4.403 -2.139 -1.958 -1.861 1.849 -2.361 -3.115 1.090 -2.559 -2.397 1.756 -2.936 0.682 1.033 -2.096 -0.478 -0.459 ML 128 126 6 131 4 1 1 41 62 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 129 126 6 131 4 1 1 41 62 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 130 126 6 131 4 0 0 39 61 -4.568 -4.250 -2.265 -0.520 IL 131 131 5 131 4 1 1 42 63 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 132 132 6 132 3 1 1 41 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 3 - a - - - ML 133 132 6 135 3 1 1 39 60 -4.135 -0.669 -1.671 0.751 -0.130 -0.893 -0.210 D 134 132 6 135 3 0 0 37 59 -6.068 -0.657 -1.511 IL 135 135 3 135 3 1 1 39 60 -2.319 -0.542 -3.149 0.000 0.000 0.000 0.000 [ MATR 8 ] - 41 - a - - MR 136 135 3 138 5 1 1 38 59 -1.734 -0.570 -7.177 -7.389 -6.303 0.615 -1.083 0.272 -0.343 D 137 135 3 138 5 0 0 35 57 -7.245 -0.193 -4.872 -5.590 -3.977 IR 138 138 3 138 5 1 1 38 59 -1.562 -0.806 -7.370 -5.537 -4.023 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 35 c g - - MP 139 138 3 143 6 2 2 36 57 -6.953 -9.442 -0.032 -8.219 -8.118 -7.439 -1.669 -1.654 -1.498 1.219 -1.737 0.162 1.675 -1.840 -1.662 0.971 -2.505 -0.382 1.398 -1.831 0.268 -1.134 ML 140 138 3 143 6 1 1 34 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 141 138 3 143 6 1 1 34 55 -7.034 -5.763 -1.672 -5.741 -0.875 -3.379 0.515 -0.487 -0.202 -0.018 D 142 138 3 143 6 0 0 32 53 -9.695 -8.394 -2.218 -4.873 -4.890 -0.488 IL 143 143 5 143 6 1 1 35 56 -2.699 -2.266 -0.880 -4.617 -5.393 -5.054 0.000 0.000 0.000 0.000 IR 144 144 6 144 5 1 1 35 56 -2.482 -0.467 -5.993 -4.161 -5.267 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 33 c g - - MP 145 144 6 149 6 2 2 33 55 -9.513 -9.452 -0.017 -8.229 -8.508 -8.377 -1.503 -1.809 -1.680 1.022 -1.308 -1.061 1.945 -2.099 -1.676 1.012 -2.014 -0.394 1.349 -1.148 0.234 -0.895 ML 146 144 6 149 6 1 1 32 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 147 144 6 149 6 1 1 32 53 -7.006 -5.735 -1.644 -5.713 -0.847 -3.675 0.399 -0.466 -0.048 -0.014 D 148 144 6 149 6 0 0 29 50 -9.579 -8.277 -4.074 -3.833 -4.774 -0.270 IL 149 149 5 149 6 1 1 33 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 150 150 6 150 5 1 1 33 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 32 c g - - MP 151 150 6 155 6 2 2 31 53 -9.511 -9.451 -0.028 -8.227 -8.507 -6.622 -1.207 -1.580 -1.455 1.239 -1.604 -2.615 1.712 -2.032 -0.968 1.247 -2.129 -0.389 1.424 -1.719 0.141 -0.915 ML 152 150 6 155 6 1 1 30 51 -6.303 -6.649 -1.364 -0.953 -6.499 -4.029 0.515 -0.487 -0.202 -0.018 MR 153 150 6 155 6 1 1 30 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 154 150 6 155 6 0 0 27 48 -9.570 -8.269 -4.066 -3.782 -4.765 -0.275 IL 155 155 5 155 6 1 1 31 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 156 156 6 156 5 1 1 31 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 31 a u - - MP 157 156 6 161 6 2 2 30 51 -9.500 -9.439 -0.016 -8.216 -8.495 -8.890 -1.464 -1.865 -1.205 1.622 -1.169 -2.702 1.506 -1.956 -1.369 1.119 -2.164 -0.452 1.474 -1.961 0.083 -0.872 ML 158 156 6 161 6 1 1 28 49 -6.358 -6.704 -1.418 -0.904 -6.554 -4.083 0.379 -0.336 -0.167 0.025 MR 159 156 6 161 6 1 1 28 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 160 156 6 161 6 0 0 25 46 -9.695 -8.394 -4.191 -4.873 -4.890 -0.196 IL 161 161 5 161 6 1 1 29 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 162 162 6 162 5 1 1 29 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 10 30 c g - - MP 163 162 6 167 6 2 2 27 49 -9.500 -9.439 -0.020 -8.216 -8.495 -7.720 -2.079 -1.623 -2.257 1.135 -1.949 -3.103 1.855 -2.528 -2.313 1.320 -2.876 -0.330 1.806 -1.874 0.121 -1.401 ML 164 162 6 167 6 1 1 26 47 -6.358 -6.704 -1.418 -0.904 -6.554 -4.083 0.538 -0.504 -0.259 0.011 MR 165 162 6 167 6 1 1 26 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 166 162 6 167 6 0 0 23 45 -9.695 -8.394 -3.679 -4.873 -4.890 -0.235 IL 167 167 5 167 6 1 1 27 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 168 168 6 168 5 1 1 27 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 11 29 c g - - MP 169 168 6 173 6 2 2 26 47 -9.498 -6.746 -0.028 -8.214 -8.494 -8.889 -1.834 -1.807 -1.949 1.601 -2.003 -2.936 1.639 -2.076 -1.943 1.581 -2.728 -0.181 1.264 -2.123 0.130 -1.330 ML 170 168 6 173 6 1 1 24 46 -6.358 -6.704 -1.290 -1.001 -6.554 -4.083 0.393 -0.560 0.100 -0.094 MR 171 168 6 173 6 1 1 24 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 172 168 6 173 6 0 0 22 44 -9.715 -8.414 -4.211 -4.893 -4.910 -0.193 IL 173 173 5 173 6 1 1 25 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 174 174 6 174 5 1 1 25 46 -2.168 -0.544 -6.087 -4.255 -5.360 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 26 c g - - MP 175 174 6 179 6 2 2 23 45 -9.501 -9.441 -0.098 -8.217 -8.497 -4.133 -3.013 -3.000 -3.134 0.893 -2.254 -3.978 2.425 -3.113 -3.123 1.047 -3.667 -0.271 1.757 -3.287 0.270 -2.032 ML 176 174 6 179 6 1 1 23 44 -6.307 -6.653 -1.231 -1.061 -6.502 -4.032 0.522 -0.492 -0.204 -0.022 MR 177 174 6 179 6 1 1 23 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 178 174 6 179 6 0 0 22 43 -9.715 -8.414 -3.928 -4.893 -4.910 -0.212 IL 179 179 5 179 6 1 1 23 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 180 180 6 180 5 1 1 23 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 25 a u - - MP 181 180 6 185 4 2 2 21 43 -7.666 -5.266 -0.067 -6.097 -2.442 -1.623 -2.474 1.800 -2.467 -3.401 1.688 -2.839 -2.658 1.706 -3.192 -0.581 1.158 -2.693 0.383 -1.719 ML 182 180 6 185 4 1 1 23 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 183 180 6 185 4 1 1 22 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 184 180 6 185 4 0 0 22 43 -4.017 -2.199 -1.450 -1.497 IL 185 185 5 185 4 1 1 24 46 -1.559 -2.059 -1.354 -5.091 0.000 0.000 0.000 0.000 IR 186 186 6 186 3 1 1 23 44 -1.251 -0.875 -4.842 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - G - - - ML 187 186 6 189 3 1 1 16 34 -8.824 -0.011 -7.478 -1.116 -2.938 1.688 -2.426 D 188 186 6 189 3 0 0 15 34 -6.639 -1.507 -0.648 IL 189 189 3 189 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - u - - - ML 190 189 3 192 3 1 1 14 33 -8.839 -0.011 -7.493 0.099 0.066 -1.374 0.581 D 191 189 3 192 3 0 0 14 33 -6.444 -1.379 -0.727 IL 192 192 3 192 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - g - - - ML 193 192 3 195 3 1 1 12 31 -8.852 -0.011 -7.506 0.688 -1.957 0.846 -1.581 D 194 192 3 195 3 0 0 13 32 -6.248 -1.761 -0.532 IL 195 195 3 195 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - A - - - ML 196 195 3 198 2 1 1 1 1 * 0.000 1.741 -2.238 -2.135 -2.200 D 197 195 3 198 2 0 0 0 0 * 0.000 IL 198 198 3 198 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 21 ] - - - - - - E 199 198 3 -1 0 0 0 0 0 [ BEGR 22 ] - - - - - - S 200 119 1 201 3 0 0 48 84 -8.856 -0.011 -7.510 IL 201 201 2 201 3 1 1 50 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 44 - A - - - ML 202 201 2 204 3 1 1 48 84 -8.856 -0.011 -7.510 1.248 -1.252 -0.854 -0.617 D 203 201 2 204 3 0 0 46 82 -6.174 -1.687 -0.566 IL 204 204 3 204 3 1 1 49 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 45 - a - - - ML 205 204 3 207 3 1 1 47 83 -8.856 -0.026 -5.984 0.632 -1.014 -0.097 0.030 D 206 204 3 207 3 0 0 46 81 -6.174 -1.687 -0.566 IL 207 207 3 207 3 1 1 48 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 46 - c - - - ML 208 207 3 210 3 1 1 46 82 -3.043 -0.196 -7.495 -0.530 0.692 -1.063 0.279 D 209 207 3 210 3 0 0 45 81 -3.214 -1.652 -0.801 IL 210 210 3 210 3 1 1 49 85 -0.750 -1.374 -5.668 0.000 0.000 0.000 0.000 [ MATL 26 ] 54 - a - - - ML 211 210 3 213 3 1 1 32 50 -8.856 -0.011 -7.510 0.294 -0.341 0.008 -0.031 D 212 210 3 213 3 0 0 31 50 -6.174 -1.687 -0.566 IL 213 213 3 213 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 55 - g - - - ML 214 213 3 216 3 1 1 30 49 -8.856 -0.011 -7.510 0.091 -0.917 0.293 0.238 D 215 213 3 216 3 0 0 30 49 -6.174 -1.687 -0.566 IL 216 216 3 216 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 56 - u - - - ML 217 216 3 219 3 1 1 29 48 -8.856 -0.011 -7.510 -0.104 -0.341 -0.007 0.362 D 218 216 3 219 3 0 0 28 47 -6.174 -1.687 -0.566 IL 219 219 3 219 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 57 - c - - - ML 220 219 3 222 3 1 1 28 47 -8.856 -0.011 -7.510 -0.744 0.883 -0.161 -0.591 D 221 219 3 222 3 0 0 27 46 -6.174 -1.687 -0.566 IL 222 222 3 222 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 58 - A - - - ML 223 222 3 225 3 1 1 27 46 -8.856 -0.011 -7.510 1.828 -3.294 -2.157 -3.014 D 224 222 3 225 3 0 0 26 45 -6.174 -1.687 -0.566 IL 225 225 3 225 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 59 - G - - - ML 226 225 3 228 3 1 1 26 45 -8.856 -0.011 -7.510 -2.824 -4.432 1.903 -3.802 D 227 225 3 228 3 0 0 25 44 -6.174 -1.687 -0.566 IL 228 228 3 228 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 60 - A - - - ML 229 228 3 231 3 1 1 25 44 -8.856 -0.011 -7.510 1.612 -2.095 -1.127 -1.994 D 230 228 3 231 3 0 0 24 43 -6.174 -1.687 -0.566 IL 231 231 3 231 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 61 - A - - - ML 232 231 3 234 5 1 1 24 43 -7.898 -0.022 -7.714 -7.926 -8.817 1.896 -3.562 -3.312 -3.442 D 233 231 3 234 5 0 0 23 41 -4.959 -0.803 -4.221 -2.596 -2.508 IL 234 234 3 234 5 1 1 24 43 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 62 71 g g - - MP 235 234 3 239 6 2 2 23 42 -9.542 -9.482 -0.016 -8.258 -8.538 -8.933 -2.333 -2.268 -1.917 0.962 -2.560 -3.370 0.857 -2.837 0.220 1.651 1.726 -0.179 0.664 -2.654 -0.702 -1.700 ML 236 234 3 239 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 237 234 3 239 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 238 234 3 239 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 239 239 5 239 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 240 240 6 240 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 63 70 U A - - MP 241 240 6 245 6 2 2 21 40 -9.542 -9.482 -0.017 -7.827 -8.538 -8.933 -7.274 -7.234 -7.008 -3.464 -5.712 -7.439 -1.394 -6.512 -6.943 -3.300 -7.339 -5.232 3.921 -5.669 -2.988 -4.821 ML 242 240 6 245 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 243 240 6 245 6 1 1 21 39 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 244 240 6 245 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 245 245 5 245 6 1 1 21 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 246 246 6 246 5 1 1 21 39 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 64 69 C G - - MP 247 246 6 251 4 2 2 19 38 -7.887 -8.094 -0.027 -6.508 -6.600 -6.605 -6.202 -2.866 -3.431 -5.317 3.907 -5.011 -6.503 -2.724 -6.387 -4.632 -1.733 -6.761 -2.891 -5.381 ML 248 246 6 251 4 1 1 20 39 -3.780 -3.962 -0.498 -2.692 0.328 -0.265 -0.275 0.119 MR 249 246 6 251 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 250 246 6 251 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 251 251 5 251 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 252 252 6 252 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 65 - A - - - ML 253 252 6 255 3 1 1 16 34 -8.856 -0.011 -7.510 1.921 -4.100 -3.587 -3.803 D 254 252 6 255 3 0 0 16 34 -6.174 -1.687 -0.566 IL 255 255 3 255 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 66 - G - - - ML 256 255 3 258 3 1 1 14 33 -8.856 -0.011 -7.510 -3.258 -4.671 1.924 -4.001 D 257 255 3 258 3 0 0 15 33 -6.174 -1.687 -0.566 IL 258 258 3 258 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 67 - C - - - ML 259 258 3 261 3 1 1 12 31 -8.856 -0.011 -7.510 -2.870 1.813 -3.161 -2.079 D 260 258 3 261 3 0 0 13 32 -6.174 -1.687 -0.566 IL 261 261 3 261 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 68 - A - - - ML 262 261 3 264 2 1 1 1 1 * 0.000 1.401 -0.593 -1.944 -1.199 D 263 261 3 264 2 0 0 0 0 * 0.000 IL 264 264 3 264 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 41 ] - - - - - - E 265 264 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME group-II-D1D4-1 ACC RF01998 DESC Group II catalytic intron D1-D4-1 LENG 84 MAXL 229 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Mar 5 14:00:10 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 237 EFFN 21.622055 CKSUM 3412095367 STATS LOCAL MSV -8.6634 0.71860 STATS LOCAL VITERBI -9.5967 0.71860 STATS LOCAL FORWARD -4.2364 0.71860 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.24233 1.54376 1.19752 1.63080 1.38629 1.38629 1.38629 1.38629 0.00827 5.49291 5.49291 1.46634 0.26236 0.00000 * 1 2.27456 0.65863 2.35313 1.25692 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.00827 5.49291 5.49291 1.46634 0.26236 1.09861 0.40547 2 1.06562 2.24707 1.06839 1.57884 2 a - - < 1.38629 1.38629 1.38629 1.38629 0.05269 5.50957 3.05179 1.46634 0.26236 1.09861 0.40547 3 0.73506 1.36752 2.25434 1.82732 3 a - - - 1.38629 1.38629 1.38629 1.38629 0.06812 3.07871 3.92044 0.17470 1.83076 0.55047 0.85963 4 1.70477 0.91965 1.82015 1.35664 5 c - - < 1.38629 1.38629 1.38629 1.38629 0.06450 3.96753 3.13401 0.39471 1.12047 0.41177 1.08611 5 2.06353 0.88284 1.70697 1.28023 7 c - - < 1.38629 1.38629 1.38629 1.38629 0.01060 5.46416 5.06597 1.46634 0.26236 1.87804 0.16592 6 1.57096 1.33187 1.32800 1.33497 8 g - - < 1.38629 1.38629 1.38629 1.38629 0.02689 5.46689 3.80289 1.46634 0.26236 1.79810 0.18106 7 1.16781 1.54155 1.56919 1.32167 9 a - - < 1.38629 1.38629 1.38629 1.38629 0.00860 5.45382 5.45382 1.46634 0.26236 2.79702 0.06293 8 1.77952 1.36301 1.53902 1.01943 10 u - - < 1.38629 1.38629 1.38629 1.38629 0.01461 5.45382 4.58337 1.46634 0.26236 2.17428 0.12069 9 1.28240 1.48044 1.30457 1.49700 11 a - - < 1.38629 1.38629 1.38629 1.38629 0.00862 5.45157 5.45157 1.46634 0.26236 2.82848 0.06092 10 2.26596 0.86059 1.76957 1.19419 12 c - - < 1.38629 1.38629 1.38629 1.38629 0.12715 5.45157 2.16185 1.46634 0.26236 2.46382 0.08895 11 1.06334 1.54511 1.54347 1.47942 13 a - - < 1.38629 1.38629 1.38629 1.38629 0.02720 3.92047 4.96148 0.43028 1.05076 0.21932 1.62486 12 2.34981 4.21153 0.14010 3.88632 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00836 5.48171 5.48171 1.46634 0.26236 0.86417 0.54715 13 1.33421 1.24205 3.05136 0.91492 17 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00825 5.49463 5.49463 1.46634 0.26236 0.58126 0.81915 14 0.82942 3.64874 0.65191 4.09713 18 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00816 5.50577 5.50577 1.46634 0.26236 1.37049 0.29301 15 0.09454 3.30218 3.49251 3.77299 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.15879 3.23004 2.23244 1.18020 0.36704 0.99573 0.46117 16 2.11443 1.53889 1.13888 1.06566 25 u - - > 1.38629 1.38629 1.38629 1.38629 0.04312 5.39890 3.27848 1.46634 0.26236 0.41402 1.08172 17 1.47574 2.20211 0.70489 1.79183 26 g - - > 1.38629 1.38629 1.38629 1.38629 0.03188 3.80893 4.68765 0.83083 0.57215 2.89734 0.05675 18 1.79679 1.48471 1.25016 1.13587 29 u - - > 1.38629 1.38629 1.38629 1.38629 0.01249 5.44148 4.81874 1.46634 0.26236 2.08766 0.13236 19 1.23305 1.60803 1.16693 1.62458 30 g - - > 1.38629 1.38629 1.38629 1.38629 0.00868 5.44375 5.44375 1.46634 0.26236 2.93053 0.05485 20 1.36660 1.84707 1.34053 1.12202 31 u - - > 1.38629 1.38629 1.38629 1.38629 0.00868 5.44375 5.44375 1.46634 0.26236 1.26653 0.33102 21 1.37657 1.57172 1.11538 1.55080 32 g - - > 1.38629 1.38629 1.38629 1.38629 0.00853 5.46208 5.46208 1.46634 0.26236 2.01412 0.14322 22 1.61201 1.52789 0.85911 1.83269 33 g - - > 1.38629 1.38629 1.38629 1.38629 0.03303 3.95472 4.31829 0.39471 1.12047 0.32679 1.27739 23 1.64246 1.25649 1.14610 1.58977 35 g - - > 1.38629 1.38629 1.38629 1.38629 1.11268 1.37599 0.87052 0.58768 0.81106 0.78700 0.60735 24 0.85788 2.67360 0.99856 1.97671 41 a - - - 1.38629 1.38629 1.38629 1.38629 0.01394 4.97307 4.97307 1.46634 0.26236 0.01913 3.96627 25 2.10362 1.57017 1.98792 0.62924 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 26 2.16253 2.51668 0.37142 2.16729 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 27 0.34592 2.72138 2.15618 2.19933 44 A - - , 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 28 0.83916 2.52390 1.37584 1.44752 45 a - - , 1.38629 1.38629 1.38629 1.38629 0.01279 5.50957 4.74852 1.46634 0.26236 1.09861 0.40547 29 2.18899 0.68925 2.32354 1.24448 46 C - - , 1.38629 1.38629 1.38629 1.38629 0.17804 1.83868 5.50494 1.24307 0.34038 0.65977 0.72767 30 1.17630 1.58895 1.26290 1.58665 54 a - - , 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 31 1.40465 2.37283 1.01557 1.20686 55 g - - , 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 32 1.67371 1.62571 1.25129 1.11006 56 u - - , 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 33 2.65179 0.51900 1.35401 2.57496 57 C - - , 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 34 0.05133 5.13428 3.28493 5.00597 58 A - - , 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 35 4.18802 6.08527 0.02186 5.48015 59 G - - , 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 36 0.16099 3.42983 2.29853 4.14122 60 A - - , 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 37 0.01888 4.82417 5.20814 5.25954 61 A - - , 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 38 2.68810 4.50510 0.09115 4.82113 62 G - - < 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 39 6.94150 6.72988 7.19415 0.00292 63 U - - < 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 40 5.94669 0.01303 6.06309 4.82834 64 C - - < 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 41 0.00998 5.97676 5.53644 5.66936 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 42 5.06957 6.24090 0.01205 5.58680 66 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 43 4.77434 0.04738 3.95325 3.98249 67 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 44 0.27199 1.72053 4.06853 3.16860 68 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01065 5.50957 5.02912 1.46634 0.26236 1.09861 0.40547 45 4.55446 5.78270 0.01737 5.62171 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.00815 5.50707 5.50707 1.46634 0.26236 0.80514 0.59244 46 0.00576 7.12843 5.91986 6.09556 70 A - - > 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 47 1.77297 1.69766 0.59756 2.33398 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 48 3.15609 3.60989 0.09951 3.68605 72 G - - < 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 49 3.22587 0.78181 1.61665 1.19027 73 c - - < 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 50 6.21243 0.00703 6.44733 5.67781 74 C - - < 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 51 0.23223 4.80306 1.65997 4.72273 75 A - - - 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 52 3.72401 4.16709 4.80966 0.04896 76 U - - - 1.38629 1.38629 1.38629 1.38629 0.02349 5.50957 3.95428 1.46634 0.26236 1.09861 0.40547 53 0.02616 4.75393 4.53460 5.04017 77 A - - - 1.38629 1.38629 1.38629 1.38629 0.01205 5.49433 4.84461 1.46634 0.26236 0.35225 1.21439 54 4.11902 4.84470 0.03537 4.54508 78 G - - - 1.38629 1.38629 1.38629 1.38629 0.00999 5.50586 5.13652 1.46634 0.26236 1.36481 0.29495 55 4.12229 4.00413 4.03270 0.05358 79 U - - - 1.38629 1.38629 1.38629 1.38629 0.00817 5.50404 5.50404 1.46634 0.26236 1.47288 0.26041 56 0.01653 5.03932 5.26925 5.34570 80 A - - - 1.38629 1.38629 1.38629 1.38629 0.03481 3.57767 5.07247 0.26955 1.44274 0.82316 0.57811 57 2.41041 1.34909 0.53133 2.76580 82 G - - < 1.38629 1.38629 1.38629 1.38629 0.02159 4.31648 4.82724 0.52677 0.89284 1.38290 0.28882 58 2.28141 0.89667 1.92393 1.06739 84 c - - < 1.38629 1.38629 1.38629 1.38629 0.01176 5.50162 4.87798 1.46634 0.26236 1.60080 0.22531 59 2.04885 1.12047 1.19524 1.41733 85 c - - < 1.38629 1.38629 1.38629 1.38629 0.46349 1.08914 3.36935 2.10222 0.13032 1.76176 0.18843 60 1.53842 1.27830 1.09784 1.75344 104 g - - < 1.38629 1.38629 1.38629 1.38629 0.15679 5.46729 1.95977 1.46634 0.26236 2.28281 0.10758 61 1.61816 1.19045 1.52826 1.27034 106 c - - < 1.38629 1.38629 1.38629 1.38629 0.05437 5.32204 3.03589 1.46634 0.26236 1.19539 0.36038 62 1.51403 1.21332 1.49121 1.35607 107 c - - < 1.38629 1.38629 1.38629 1.38629 0.07384 4.09292 2.90975 0.50006 0.93266 0.71038 0.67620 63 1.33207 1.86587 1.40564 1.09035 109 u - - _ 1.38629 1.38629 1.38629 1.38629 0.84117 0.68862 2.71013 2.18828 0.11891 0.26700 1.45104 64 1.74457 2.39532 0.50916 2.01636 137 G - - _ 1.38629 1.38629 1.38629 1.38629 0.30003 5.42921 1.36719 1.46634 0.26236 0.76103 0.62958 65 1.43315 1.56061 1.99011 0.88006 138 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02319 5.19402 4.05287 1.46634 0.26236 2.04400 0.13870 66 0.83112 1.87465 1.32735 1.92515 139 a - - _ 1.38629 1.38629 1.38629 1.38629 0.07517 5.22632 2.70248 1.46634 0.26236 1.48352 0.25727 67 0.53283 1.87983 2.18208 1.91299 140 A - - _ 1.38629 1.38629 1.38629 1.38629 0.14552 5.23716 2.03934 1.46634 0.26236 3.58504 0.02813 68 1.15346 1.77474 1.70539 1.09893 141 u - - _ 1.38629 1.38629 1.38629 1.38629 0.09337 5.10820 2.48773 1.46634 0.26236 0.68244 0.70397 69 1.23313 1.60414 1.23172 1.53355 142 g - - _ 1.38629 1.38629 1.38629 1.38629 0.79424 0.75005 2.58052 1.12112 0.39440 1.64469 0.21452 70 1.45395 1.06107 1.62298 1.50076 151 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01056 5.24932 5.24932 1.46634 0.26236 0.67192 0.71484 71 1.18004 1.60299 1.31148 1.50500 152 a - - _ 1.38629 1.38629 1.38629 1.38629 0.16737 3.76194 2.03350 0.35393 1.21040 0.44525 1.02349 72 1.57469 1.52875 0.99693 1.57450 154 g - - > 1.38629 1.38629 1.38629 1.38629 0.08147 5.34914 2.61065 1.46634 0.26236 1.60055 0.22538 73 1.43138 1.73709 1.02567 1.48530 155 g - - > 1.38629 1.38629 1.38629 1.38629 0.01164 5.31300 5.01356 1.46634 0.26236 0.29070 1.37731 74 2.04569 1.22588 1.13310 1.36580 156 g - - > 1.38629 1.38629 1.38629 1.38629 0.38681 1.15026 5.46729 1.00100 0.45810 0.45352 1.00892 75 1.42632 1.36036 0.99634 2.00983 164 g - - > 1.38629 1.38629 1.38629 1.38629 0.01135 5.49808 4.93501 1.46634 0.26236 1.13813 0.38627 76 1.30997 1.90498 0.76363 2.15955 165 g - - > 1.38629 1.38629 1.38629 1.38629 0.00822 5.49853 5.49853 1.46634 0.26236 0.87670 0.53812 77 3.05475 0.97498 1.27678 1.21492 166 c - - > 1.38629 1.38629 1.38629 1.38629 0.00817 5.50415 5.50415 1.46634 0.26236 1.46685 0.26221 78 2.66238 3.41648 0.12834 4.02662 167 G - - - 1.38629 1.38629 1.38629 1.38629 0.00817 5.50415 5.50415 1.46634 0.26236 1.03528 0.43870 79 0.05018 4.22382 4.19878 3.94824 168 A - - - 1.38629 1.38629 1.38629 1.38629 0.02505 3.87888 5.50634 0.83223 0.57106 1.33392 0.30577 80 0.08136 3.46212 3.59247 3.95064 171 A - - - 1.38629 1.38629 1.38629 1.38629 0.01191 5.50634 4.85663 1.46634 0.26236 1.03447 0.43915 81 3.16418 3.80787 0.09226 3.74280 172 G - - - 1.38629 1.38629 1.38629 1.38629 0.01121 5.50404 4.95118 1.46634 0.26236 0.61347 0.77973 82 5.92290 6.51161 0.00528 6.80773 173 G - - > 1.38629 1.38629 1.38629 1.38629 0.00815 5.50658 5.50658 1.46634 0.26236 0.76575 0.62546 83 1.24998 1.66249 0.75475 2.92446 174 g - - > 1.38629 1.38629 1.38629 1.38629 0.00813 5.50957 5.50957 1.46634 0.26236 1.09861 0.40547 84 3.71168 0.13255 3.42997 2.69833 175 C - - > 1.38629 1.38629 1.38629 1.38629 0.00407 5.50551 * 1.46634 0.26236 0.00000 * //