INFERNAL1/a [1.1.4 | Dec 2020] NAME c-di-GMP-II ACC RF01786 DESC Cyclic di-GMP-II riboswitch STATES 259 NODES 65 CLEN 85 W 180 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:42:16 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 54 EFFN 4.643921 CKSUM 702390939 NULL 0.000 0.000 0.000 0.000 GA 52.00 TC 52.00 NC 51.60 EFP7GF -14.9163 0.71855 ECMLC 0.65954 -4.68049 3.06259 1600000 198189 0.006055 ECMGC 0.43177 -16.58307 -4.70527 1600000 67503 0.005926 ECMLI 0.65097 -3.02050 4.44395 1600000 154699 0.007757 ECMGI 0.46528 -11.95084 -1.47169 1600000 52429 0.007629 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 180 303 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 IL 1 1 2 1 6 1 30 182 304 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 30 182 304 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 113 c g - - MP 3 2 3 7 6 2 35 181 303 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 -0.182 -0.999 -0.503 1.164 -0.155 -2.061 1.320 -2.178 -1.376 1.026 -2.467 -0.431 1.293 -1.739 0.160 -0.729 ML 4 2 3 7 6 1 27 178 301 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 27 178 300 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 21 173 295 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 29 180 302 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 30 180 302 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 112 a u - - MP 9 8 6 13 6 2 35 179 301 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 -0.975 -1.504 -0.777 1.653 -0.981 -2.138 1.291 -1.714 -1.716 0.899 -1.694 -0.387 1.432 -1.678 0.231 -1.009 ML 10 8 6 13 6 1 27 176 299 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 26 176 298 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 20 171 293 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 29 178 300 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 29 178 300 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 111 c g - - MP 15 14 6 19 6 2 34 177 299 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 -0.155 -1.841 -1.439 1.233 -1.309 -2.224 1.540 -1.807 -1.383 1.037 -1.797 -0.137 1.328 -1.642 0.030 -0.306 ML 16 14 6 19 6 1 26 174 297 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 26 174 296 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 20 169 291 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 28 176 298 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 29 176 298 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 110 c g - - MP 21 20 6 25 6 2 32 175 297 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 -0.298 -1.317 -1.828 1.300 -1.314 -2.030 1.574 -1.916 -1.348 0.934 -1.680 -0.522 1.240 -1.967 0.373 -0.110 ML 22 20 6 25 6 1 26 173 295 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 25 172 294 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 19 167 290 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 27 174 296 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 28 174 296 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 109 c g - - MP 27 26 6 31 6 2 31 173 295 -9.479 -9.419 -0.103 -4.040 -8.475 -8.870 -0.338 -1.130 -1.616 1.410 -1.280 -2.678 1.447 -2.179 -1.148 0.925 -2.468 -0.157 1.387 -1.418 0.195 -0.535 ML 28 26 6 31 6 1 25 171 293 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 24 170 293 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 19 166 288 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 27 172 294 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 27 172 294 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 108 a u - - MP 33 32 6 37 6 2 30 171 293 -9.394 -9.333 -0.057 -5.268 -7.017 -8.785 -0.677 -1.400 -1.793 1.461 -1.273 -2.643 1.383 -1.783 -1.860 1.264 -2.038 -0.495 1.431 -1.404 0.021 -0.391 ML 34 32 6 37 6 1 25 169 291 -7.241 -7.587 -2.301 -0.420 -7.437 -4.966 -0.512 1.005 -1.257 -0.194 MR 35 32 6 37 6 1 24 169 291 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 18 164 286 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 26 170 292 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 27 170 292 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 7 107 u a - - MP 39 38 6 43 6 2 29 169 291 -9.355 -9.294 -0.067 -8.070 -4.787 -8.745 -1.001 -1.529 -1.347 1.337 -1.768 -2.627 1.450 -1.795 -1.843 1.173 -1.917 -0.364 1.550 -1.496 0.392 -0.766 ML 40 38 6 43 6 1 25 168 290 -7.483 -7.829 -0.423 -2.237 -7.679 -5.208 -0.222 -0.671 -1.058 1.024 MR 41 38 6 43 6 1 23 167 289 -7.081 -5.810 -1.448 -5.788 -0.922 -4.002 0.228 -0.363 -0.349 0.341 D 42 38 6 43 6 0 17 162 285 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 25 168 291 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 26 168 290 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 8 106 u a - - MP 45 44 6 49 6 2 27 167 289 -9.435 -9.374 -0.029 -6.402 -8.430 -8.826 -2.104 -2.222 -2.278 1.464 -1.847 -3.122 1.551 -2.043 -2.332 1.426 -2.893 -0.370 1.772 -2.415 0.185 -1.036 ML 46 44 6 49 6 1 23 165 287 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 23 165 287 -7.528 -6.257 -0.901 -6.236 -1.369 -4.449 0.315 -0.606 0.023 0.115 D 48 44 6 49 6 0 17 161 283 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 24 166 289 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 25 166 288 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 9 105 u a - - MP 51 50 6 55 6 2 26 165 287 -9.468 -9.407 -0.016 -8.184 -8.463 -8.858 -2.133 -2.681 -2.800 1.042 -2.449 -3.641 1.959 -2.910 -2.823 1.298 -3.372 -0.719 2.158 -2.941 -0.158 -1.575 ML 52 50 6 55 6 1 22 163 286 -6.437 -6.783 -1.072 -1.192 -6.633 -4.163 0.152 0.113 -0.523 0.153 MR 53 50 6 55 6 1 20 163 285 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 16 160 282 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 23 164 287 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 23 164 286 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 10 104 G C - - MP 57 56 6 61 6 2 24 163 285 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 -3.698 -2.105 -3.592 1.582 -4.256 -4.236 0.551 -4.133 -3.925 3.013 -4.246 -0.264 0.380 -3.504 -1.300 -2.574 ML 58 56 6 61 6 1 21 162 284 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 19 161 283 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 16 159 281 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 22 162 285 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 22 162 285 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 11 103 G C - - MP 63 62 6 67 4 2 22 161 283 -7.772 -7.979 -0.049 -5.337 -5.328 -1.487 -5.413 0.015 -6.390 -5.036 -1.457 -5.898 -4.869 3.721 -5.149 -1.173 -1.733 -4.830 -3.518 -4.327 ML 64 62 6 67 4 1 19 160 283 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 4 1 17 159 282 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 16 158 281 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 21 161 283 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 20 161 283 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 69 68 6 71 3 1 20 159 281 -9.077 -0.011 -7.394 1.598 -2.525 -0.807 -2.129 D 70 68 6 71 3 0 15 157 280 -5.782 -0.635 -1.565 IL 71 71 3 71 3 1 19 159 282 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 102 - g - - MR 72 71 3 74 3 1 19 158 281 -9.094 -0.011 -7.411 0.398 -1.677 0.987 -1.371 D 73 71 3 74 3 0 13 156 278 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 18 158 281 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 101 - G - - MR 75 74 3 77 3 1 18 157 280 -9.094 -0.011 -7.411 -1.700 -2.208 1.686 -1.955 D 76 74 3 77 3 0 12 155 277 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 17 157 280 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 100 - C - - MR 78 77 3 80 3 1 18 156 279 -9.094 -0.011 -7.411 -3.538 1.889 -4.292 -2.650 D 79 77 3 80 3 0 12 154 276 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 16 156 279 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 99 - C - - MR 81 80 3 83 3 1 17 155 278 -9.094 -0.011 -7.411 -3.086 1.827 -3.880 -1.909 D 82 80 3 83 3 0 11 153 275 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 15 155 278 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 98 - A - - MR 84 83 3 86 3 1 16 154 277 -9.094 -0.011 -7.411 1.653 -1.892 -1.632 -1.923 D 85 83 3 86 3 0 10 152 274 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 15 154 277 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 97 - A - - MR 87 86 3 89 3 1 15 153 276 -9.094 -0.011 -7.411 1.733 -2.833 -1.479 -2.497 D 88 86 3 89 3 0 9 151 273 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 14 153 276 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 96 - C - - MR 90 89 3 92 3 1 15 152 275 -9.094 -0.011 -7.411 -0.137 1.121 -2.004 -0.587 D 91 89 3 92 3 0 8 150 272 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 13 153 275 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 95 - G - - MR 93 92 3 95 3 1 14 151 274 -9.094 -0.011 -7.411 -3.078 -4.473 1.913 -3.819 D 94 92 3 95 3 0 7 149 271 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 12 152 274 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 94 - U - - MR 96 95 3 98 3 1 13 150 273 -9.094 -0.011 -7.411 -1.582 -0.008 -2.378 1.310 D 97 95 3 98 3 0 6 148 270 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 12 151 273 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 93 - G - - MR 99 98 3 101 3 1 13 149 272 -9.094 -0.011 -7.411 -0.929 -3.058 1.670 -2.533 D 100 98 3 101 3 0 6 147 269 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 11 150 272 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 92 - a - - MR 102 101 3 104 3 1 12 148 271 -9.094 -0.011 -7.411 0.706 -1.730 0.614 -0.898 D 103 101 3 104 3 0 5 146 268 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 10 149 271 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 91 - U - - MR 105 104 3 107 3 1 11 147 270 -9.094 -0.011 -7.411 -1.857 -1.609 -2.322 1.676 D 106 104 3 107 3 0 4 145 267 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 9 148 270 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 90 - G - - MR 108 107 3 110 3 1 10 146 269 -9.094 -0.011 -7.411 -0.520 -1.366 1.279 -1.033 D 109 107 3 110 3 0 3 144 266 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 8 147 269 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 89 - A - - MR 111 110 3 113 5 1 10 145 268 -7.794 -0.024 -7.609 -7.821 -8.713 1.737 -2.638 -1.864 -2.119 D 112 110 3 113 5 0 3 143 266 -5.352 -0.707 -2.978 -4.409 -2.404 IR 113 113 3 113 5 1 6 145 268 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 13 88 g c - - MP 114 113 3 118 6 2 10 144 267 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 -2.405 -2.294 -2.005 1.783 -2.070 -3.354 1.549 -2.860 -2.641 2.023 -3.169 -0.093 1.005 -2.641 -0.543 -1.363 ML 115 113 3 118 6 1 4 142 265 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 3 118 6 1 3 142 264 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 3 118 6 0 0 138 261 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 6 143 266 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 6 143 266 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 14 87 G C - - MP 120 119 6 124 6 2 8 142 265 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 -3.982 -2.727 -3.873 1.814 -4.660 -4.501 0.232 -4.399 -4.135 3.100 -4.456 -0.369 -0.048 -3.792 -1.934 -2.816 ML 121 119 6 124 6 1 4 141 263 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 2 140 262 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 138 260 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 5 142 264 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 5 141 264 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 15 86 C G - - MP 126 125 6 130 4 2 7 140 263 -5.656 -7.979 -0.052 -6.394 -4.507 -4.430 -4.323 0.119 -3.097 -4.859 3.348 -3.849 -4.308 -0.326 -4.677 -2.298 0.865 -4.615 0.386 -3.123 ML 127 125 6 130 4 1 3 139 262 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 4 1 1 138 260 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 129 125 6 130 4 0 0 137 259 -4.568 -4.250 -2.265 -0.520 IL 130 130 5 130 4 1 5 140 262 -1.847 -2.531 -0.949 -5.016 0.000 0.000 0.000 0.000 IR 131 131 6 131 3 1 4 140 262 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 17 - u - - - ML 132 131 6 134 3 1 6 138 261 -8.743 -0.012 -7.397 -0.161 -1.112 0.400 0.404 D 133 131 6 134 3 0 0 136 258 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 3 139 261 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 18 - a - - - ML 135 134 3 137 3 1 5 137 260 -8.743 -0.012 -7.397 0.604 -1.032 -0.540 0.382 D 136 134 3 137 3 0 0 135 257 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 3 138 260 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 19 - U - - - ML 138 137 3 140 3 1 4 136 259 -8.743 -0.012 -7.397 -0.588 -0.925 -1.511 1.297 D 139 137 3 140 3 0 0 134 256 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 2 137 259 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 20 - G - - - ML 141 140 3 143 3 1 4 135 258 -8.743 -0.012 -7.397 -3.078 -4.473 1.913 -3.819 D 142 140 3 143 3 0 0 133 255 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 2 136 258 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 21 - A - - - ML 144 143 3 146 3 1 3 134 257 -8.743 -0.012 -7.397 1.909 -3.899 -3.398 -3.590 D 145 143 3 146 3 0 0 132 255 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 2 135 257 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 22 - a - - - ML 147 146 3 149 3 1 2 133 256 -9.094 -0.011 -7.411 0.546 -0.731 -0.866 0.474 D 148 146 3 149 3 0 0 132 254 -5.620 -0.734 -1.403 IL 149 149 3 149 3 1 1 134 256 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 85 - A - - MR 150 149 3 152 3 1 2 132 255 -9.094 -0.011 -7.411 1.909 -3.899 -3.398 -3.590 D 151 149 3 152 3 0 0 130 252 -6.390 -1.568 -0.620 IR 152 152 3 152 3 1 1 133 255 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 84 - G - - MR 153 152 3 155 3 1 2 131 254 -9.094 -0.011 -7.411 -3.078 -4.473 1.913 -3.819 D 154 152 3 155 3 0 0 129 251 -6.390 -1.568 -0.620 IR 155 155 3 155 3 1 1 132 254 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 83 - G - - MR 156 155 3 158 5 1 1 130 253 -5.641 -0.047 -7.609 -7.821 -8.713 -0.729 -0.936 1.018 -0.236 D 157 155 3 158 5 0 0 128 250 -5.352 -0.707 -2.978 -4.409 -2.404 IR 158 158 3 158 5 1 1 130 253 -2.507 -0.458 -6.018 -4.186 -5.292 0.000 0.000 0.000 0.000 [ MATP 39 ] 23 81 c g - - MP 159 158 3 163 6 2 2 129 252 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 -3.076 -2.679 -3.163 0.998 -2.956 -3.922 2.054 -3.322 -3.228 1.986 -3.705 0.885 1.095 -3.237 -0.688 -1.667 ML 160 158 3 163 6 1 1 127 249 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 3 163 6 1 1 127 249 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 3 163 6 0 0 122 244 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 128 251 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 128 251 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 24 80 c g - - MP 165 164 6 169 6 2 2 127 250 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 -3.574 -3.488 -3.620 1.144 -2.808 -4.404 2.532 -3.410 -3.582 0.495 -4.087 -1.402 2.094 -3.803 0.023 -2.469 ML 166 164 6 169 6 1 1 125 247 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 125 247 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 120 242 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 126 249 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 126 249 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 25 79 g c - - MP 171 170 6 175 6 2 2 125 248 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 -3.328 -2.524 -3.310 1.833 -3.666 -3.009 1.010 -3.754 -3.554 2.707 -3.952 -0.195 0.595 -3.286 -1.284 -2.348 ML 172 170 6 175 6 1 1 123 245 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 123 245 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 118 240 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 125 247 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 124 247 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 26 78 u a - - MP 177 176 6 181 6 2 2 123 246 -5.745 -9.419 -0.042 -8.195 -8.475 -8.870 -3.041 -2.211 -3.149 0.906 -2.663 -3.980 2.068 -3.158 -3.157 1.488 -3.689 -0.982 2.171 -3.287 -0.299 -2.116 ML 178 176 6 181 6 1 1 121 243 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 6 1 1 121 243 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 180 176 6 181 6 0 0 116 239 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 181 181 5 181 6 1 1 123 245 -1.896 -3.366 -0.829 -5.022 -5.798 -5.458 0.000 0.000 0.000 0.000 IR 182 182 6 182 5 1 1 122 245 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 29 77 g c - - MP 183 182 6 187 6 2 2 121 244 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 -2.566 -1.875 -2.705 1.501 -2.496 -3.531 1.637 -2.904 -2.762 1.678 -3.300 -0.742 1.635 -2.826 0.577 -1.811 ML 184 182 6 187 6 1 1 119 242 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 185 182 6 187 6 1 1 119 241 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 186 182 6 187 6 0 0 115 237 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 187 187 5 187 6 1 1 121 243 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 188 188 6 188 5 1 1 120 243 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 30 76 c g - - MP 189 188 6 193 6 2 2 119 242 -9.479 -9.419 -0.016 -8.195 -8.475 -8.870 -2.949 -2.894 -3.067 0.891 -2.064 -3.903 2.054 -3.096 -3.076 1.691 -3.614 -0.615 1.914 -3.208 -0.018 -2.056 ML 190 188 6 193 6 1 1 117 240 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 6 193 6 1 1 117 239 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 6 193 6 0 0 114 236 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 119 241 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 118 241 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 31 75 c g - - MP 195 194 6 199 6 2 2 118 240 -5.650 -9.419 -0.044 -8.195 -8.475 -8.870 -2.404 -2.514 -2.567 1.053 -1.643 -3.415 1.997 -2.734 -1.941 1.233 -3.157 -0.876 1.762 -2.714 0.777 -1.688 ML 196 194 6 199 6 1 1 116 238 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 6 1 1 115 238 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 6 199 6 0 0 113 235 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 1 117 239 -2.884 -2.184 -0.833 -4.802 -5.578 -5.239 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 117 239 -2.520 -0.453 -6.031 -4.199 -5.305 0.000 0.000 0.000 0.000 [ MATP 46 ] 33 73 c g - - MP 201 200 6 205 4 2 2 115 238 -7.772 -7.979 -0.030 -6.394 -3.629 -3.511 -3.672 0.567 -2.822 -4.467 2.844 -3.429 -3.620 0.658 -4.128 -1.369 1.806 -3.852 -0.244 -1.745 ML 202 200 6 205 4 1 1 114 237 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 4 1 1 114 236 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 204 200 6 205 4 0 0 112 235 -4.568 -4.250 -2.265 -0.520 IL 205 205 5 205 4 1 1 115 238 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 206 206 6 206 3 1 1 115 237 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 34 - U - - - ML 207 206 6 209 3 1 1 114 236 -8.743 -0.012 -7.397 -0.761 -0.656 -1.954 1.332 D 208 206 6 209 3 0 0 111 234 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 114 236 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 35 - u - - - ML 210 209 3 212 3 1 1 113 235 -8.743 -0.193 -3.022 -0.045 -0.627 0.060 0.424 D 211 209 3 212 3 0 0 111 233 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 113 236 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 36 - u - - - ML 213 212 3 215 3 1 1 112 234 -2.331 -0.332 -7.217 -0.177 -0.606 -0.541 0.825 D 214 212 3 215 3 0 0 110 232 -7.689 -0.398 -2.081 IL 215 215 3 215 3 1 1 112 234 -2.199 -0.418 -4.899 0.000 0.000 0.000 0.000 [ MATL 50 ] 38 - A - - - ML 216 215 3 218 3 1 1 110 233 -8.743 -0.067 -4.539 1.821 -2.612 -2.756 -2.690 D 217 215 3 218 3 0 0 108 231 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 111 233 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 39 - U - - - ML 219 218 3 221 3 1 1 110 232 -8.689 -0.012 -7.343 -0.812 -0.782 -1.653 1.340 D 220 218 3 221 3 0 0 108 230 -6.842 -0.821 -1.233 IL 221 221 3 221 3 1 1 110 232 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 40 - u - - - ML 222 221 3 224 3 1 1 109 231 -8.743 -0.012 -7.397 -0.102 -0.416 -0.593 0.727 D 223 221 3 224 3 0 0 106 228 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 109 231 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 41 - U - - - ML 225 224 3 227 3 1 1 108 230 -8.743 -0.029 -5.856 -2.100 -1.281 -2.850 1.686 D 226 224 3 227 3 0 0 105 227 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 108 230 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 42 - G - - - ML 228 227 3 230 3 1 1 107 229 -8.727 -0.012 -7.381 -3.051 -4.444 1.911 -3.792 D 229 227 3 230 3 0 0 104 226 -6.413 -1.926 -0.464 IL 230 230 3 230 3 1 1 107 229 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 43 - G - - - ML 231 230 3 233 3 1 1 106 228 -8.727 -0.012 -7.381 -3.051 -4.444 1.911 -3.792 D 232 230 3 233 3 0 0 103 225 -6.413 -1.267 -0.804 IL 233 233 3 233 3 1 1 106 228 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 44 - G - - - ML 234 233 3 236 3 1 1 105 227 -8.743 -0.012 -7.397 -0.643 -1.702 1.138 -0.232 D 235 233 3 236 3 0 0 102 224 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 105 227 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 45 - C - - - ML 237 236 3 239 3 1 1 104 226 -5.495 -0.041 -7.397 -2.778 1.767 -3.614 -1.435 D 238 236 3 239 3 0 0 101 223 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 104 226 -1.552 -0.722 -4.252 0.000 0.000 0.000 0.000 [ MATL 58 ] 47 - A - - - ML 240 239 3 242 3 1 1 103 225 -8.743 -0.012 -7.397 1.327 -2.308 0.010 -1.828 D 241 239 3 242 3 0 0 99 222 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 103 225 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 48 - C - - - ML 243 242 3 245 3 1 1 102 224 -8.743 -0.012 -7.397 -2.026 1.509 -2.937 -0.364 D 244 242 3 245 3 0 0 98 220 -6.174 -1.687 -0.566 IL 245 245 3 245 3 1 1 102 224 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 49 - u - - - ML 246 245 3 248 3 1 1 101 223 -8.743 -0.012 -7.397 -1.447 0.596 -2.293 0.939 D 247 245 3 248 3 0 0 96 218 -6.174 -1.687 -0.566 IL 248 248 3 248 3 1 1 101 223 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 50 - U - - - ML 249 248 3 251 3 1 1 100 222 -8.743 -0.012 -7.397 -0.789 -1.177 -2.097 1.457 D 250 248 3 251 3 0 0 92 214 -6.174 -1.687 -0.566 IL 251 251 3 251 3 1 1 100 222 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 51 - u - - - ML 252 251 3 254 3 1 1 99 221 -2.350 -1.162 -1.487 0.314 -0.922 -0.201 0.443 D 253 251 3 254 3 0 0 80 202 -6.174 -1.687 -0.566 IL 254 254 3 254 3 1 1 108 231 -0.217 -2.898 -7.470 0.000 0.000 0.000 0.000 [ MATL 63 ] 72 - g - - - ML 255 254 3 257 2 1 1 1 1 * 0.000 -0.032 -1.329 0.926 -0.467 D 256 254 3 257 2 0 0 0 0 * 0.000 IL 257 257 3 257 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 64 ] - - - - - - E 258 257 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME c-di-GMP-II ACC RF01786 DESC Cyclic di-GMP-II riboswitch LENG 85 MAXL 251 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:42:16 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 54 EFFN 18.809692 CKSUM 702390939 STATS LOCAL MSV -8.8547 0.71855 STATS LOCAL VITERBI -9.3383 0.71855 STATS LOCAL FORWARD -4.0245 0.71855 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.40710 1.53205 1.21820 1.41349 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 0.00000 * 1 1.08467 1.42516 1.70498 1.42819 1 a - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 2 0.96888 1.70553 1.79685 1.29830 2 a - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 3 1.31032 1.45582 1.48146 1.31026 3 u - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 4 1.27360 1.40300 1.73968 1.20817 4 u - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 5 1.13076 1.67873 1.63611 1.21786 5 a - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 6 1.31224 1.37956 1.59681 1.28535 6 u - - < 1.38629 1.38629 1.38629 1.38629 0.01994 5.35600 4.19828 1.46634 0.26236 1.09861 0.40547 7 1.44950 1.81079 1.64776 0.89329 7 u - - < 1.38629 1.38629 1.38629 1.38629 0.08378 5.34565 2.58231 1.46634 0.26236 0.48760 0.95217 8 1.44705 1.77335 1.45502 1.01728 8 u - - < 1.38629 1.38629 1.38629 1.38629 0.01020 5.28333 5.28333 1.46634 0.26236 0.11882 2.18901 9 1.97318 1.38587 1.75421 0.82591 9 u - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 10 1.51501 2.72083 0.47546 2.37755 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 11 2.75486 5.14349 0.07883 5.05900 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.02521 5.35600 3.90342 1.46634 0.26236 1.09861 0.40547 12 0.17905 4.61099 1.94388 4.52401 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.00963 5.34043 5.34043 1.46634 0.26236 0.38385 1.14329 13 1.13665 1.63505 1.03611 2.04535 13 g - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 14 1.30617 3.00263 0.46871 2.92477 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 15 3.01489 0.21440 4.41686 2.02611 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.02820 3.76848 5.35600 0.36830 1.17736 1.09861 0.40547 16 1.74737 2.77339 0.89838 1.03257 17 g - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 17 0.85720 2.66099 1.83510 1.06081 18 a - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 18 2.07700 2.40596 2.94497 0.31209 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 19 4.94553 6.10151 0.01370 5.46038 20 G - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 20 0.01157 5.81801 5.38867 5.53030 21 A - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 21 0.90317 2.16617 2.23417 0.98612 22 a - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 22 2.30324 1.10741 0.83674 1.99121 23 g - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 23 1.85952 0.85584 3.06208 0.98742 24 c - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 24 1.21187 2.12779 0.69705 2.46267 25 g - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 25 2.20713 1.28077 1.66204 0.86178 26 u - - < 1.38629 1.38629 1.38629 1.38629 0.05043 3.11318 5.35600 0.76789 0.62361 1.09861 0.40547 26 1.42067 1.74528 1.48881 1.02663 29 u - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 27 2.32450 1.26976 1.27734 1.07151 30 u - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 28 2.04274 1.25382 1.66951 0.92489 31 u - - < 1.38629 1.38629 1.38629 1.38629 0.05351 3.04955 5.35600 0.18855 1.76119 1.09861 0.40547 29 2.64274 0.54182 2.59486 1.30016 33 C - - < 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 30 2.28063 2.02034 3.96949 0.29264 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 31 1.58670 1.98504 1.19721 1.03286 35 u - - _ 1.38629 1.38629 1.38629 1.38629 0.17023 5.35600 1.88511 1.46634 0.26236 1.09861 0.40547 32 1.70357 2.00606 1.74727 0.67491 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.30926 1.34525 5.19690 0.04196 3.19193 0.06032 2.83807 33 0.04521 3.69778 4.67834 4.59209 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05763 5.35600 2.97051 1.46634 0.26236 1.09861 0.40547 34 2.41713 2.18612 3.15937 0.27969 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00995 5.30833 5.30833 1.46634 0.26236 0.16897 1.86132 35 1.61074 1.75209 1.81997 0.76611 40 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 36 4.15230 2.53786 4.66085 0.11006 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02395 5.35600 3.96611 1.46634 0.26236 1.09861 0.40547 37 4.93118 6.08525 0.01391 5.44575 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00962 5.34167 5.34167 1.46634 0.26236 1.79416 0.18184 38 4.93118 6.08525 0.01391 5.44575 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00962 5.34167 5.34167 1.46634 0.26236 0.40426 1.10102 39 2.36041 3.66183 0.39856 1.56711 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 40 4.83667 0.07201 5.22954 2.87896 45 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03495 3.51901 5.35600 0.29287 1.37089 1.09861 0.40547 41 0.35331 4.71232 1.27776 4.60550 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 42 4.27765 0.20583 4.91366 1.80296 48 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 43 3.90351 0.82326 4.59165 0.63356 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 44 2.19727 2.72058 4.10628 0.21494 50 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 45 1.14864 2.46333 1.46145 1.00545 51 u - - _ 1.38629 1.38629 1.38629 1.38629 1.18250 1.39373 0.80891 2.45300 0.08996 1.09861 0.40547 46 1.62529 3.13384 0.45295 2.08873 72 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01702 4.77507 4.77507 1.46634 0.26236 0.02097 3.87492 47 1.49029 2.74052 0.49042 2.32497 73 G - - > 1.38629 1.38629 1.38629 1.38629 0.03402 3.54993 5.35600 0.30137 1.34632 1.09861 0.40547 48 1.28459 1.82499 0.87557 1.92833 75 g - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 49 1.20370 1.39990 1.13709 2.02082 76 g - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 50 1.47060 1.49164 1.20148 1.40871 77 g - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 51 0.93624 1.66150 1.18596 2.18395 78 a - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 52 2.61242 0.74737 2.12337 1.09839 79 c - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 53 1.13992 3.24277 0.74357 1.79766 80 g - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 54 2.25003 1.38284 1.06081 1.21213 81 g - - > 1.38629 1.38629 1.38629 1.38629 0.03109 3.65399 5.35600 0.33169 1.26483 1.09861 0.40547 55 2.73297 2.22588 0.44073 1.69589 83 G - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 56 4.94553 6.10151 0.01370 5.46038 84 G - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 57 0.01157 5.81801 5.38867 5.53030 85 A - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 58 2.95645 4.57464 0.12117 2.96022 86 G - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 59 3.12335 0.50135 2.86622 1.22635 87 C - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 60 2.24307 1.20181 1.53736 0.97214 88 u - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 61 0.09174 4.28013 3.08888 3.56611 89 A - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 62 2.06836 2.58948 0.31606 2.66594 90 G - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 63 3.80138 3.11776 3.57166 0.09949 91 U - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 64 0.78943 3.85286 0.78181 2.70156 92 g - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 65 2.20516 4.88703 0.13774 4.51878 93 G - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 66 4.03338 1.32278 4.61533 0.34815 94 U - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 67 4.94553 6.10151 0.01370 5.46038 95 G - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 68 1.52569 0.38441 4.08446 2.46692 96 C - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 69 0.09791 4.74333 2.59078 4.64660 97 A - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 70 0.12808 3.05452 2.93283 3.92093 98 A - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 71 4.99209 0.04493 5.31815 3.43440 99 C - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 72 5.36838 0.01684 5.68889 4.75016 100 C - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 73 3.62891 3.17195 0.11004 3.33169 101 G - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 74 1.07938 3.14946 0.52478 3.66375 102 G - - - 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 75 5.04991 0.05334 5.01210 3.24738 103 C - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 76 2.63974 0.49883 2.46252 1.44325 104 C - - > 1.38629 1.38629 1.38629 1.38629 0.02839 5.35600 3.76042 1.46634 0.26236 1.09861 0.40547 77 0.90585 1.88837 1.26962 1.81067 105 a - - > 1.38629 1.38629 1.38629 1.38629 0.00966 5.33728 5.33728 1.46634 0.26236 0.34045 1.24289 78 1.25621 1.65192 1.49783 1.20407 106 u - - > 1.38629 1.38629 1.38629 1.38629 0.21101 5.35600 1.68463 1.46634 0.26236 1.09861 0.40547 79 1.34347 1.62509 1.25810 1.35490 107 g - - > 1.38629 1.38629 1.38629 1.38629 0.01159 5.15659 5.15659 1.46634 0.26236 1.29794 0.31896 80 1.33633 1.46903 1.62979 1.16773 108 u - - > 1.38629 1.38629 1.38629 1.38629 0.01094 5.21413 5.21413 1.46634 0.26236 0.06663 2.74166 81 1.19810 1.81803 1.44828 1.20093 109 a - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 82 1.36696 1.89169 1.16405 1.26555 110 g - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 83 1.23814 1.83695 1.31864 1.26133 111 a - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 84 1.34047 1.95123 1.36222 1.07855 112 u - - > 1.38629 1.38629 1.38629 1.38629 0.00948 5.35600 5.35600 1.46634 0.26236 1.09861 0.40547 85 1.03172 1.64776 1.36916 1.62553 113 a - - > 1.38629 1.38629 1.38629 1.38629 0.00475 5.35127 * 1.46634 0.26236 0.00000 * //