INFERNAL1/a [1.1.4 | Dec 2020] NAME snoU49 ACC RF01300 DESC Small nucleolar RNA U49 STATES 199 NODES 59 CLEN 65 W 81 ALPH RNA RF no CONS yes MAP yes DATE Fri Feb 28 01:26:06 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 2.495117 CKSUM 224884205 NULL 0.000 0.000 0.000 0.000 GA 35.00 TC 37.10 NC 33.90 EFP7GF -9.7879 0.71895 ECMLC 0.63095 -7.99426 1.94894 1600000 636483 0.001885 ECMGC 0.44157 -14.84993 -2.16473 1600000 108321 0.003693 ECMLI 0.60871 -5.36027 3.82096 1600000 320871 0.003740 ECMGI 0.46191 -11.04871 0.35651 1600000 77627 0.005153 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 81 101 -7.163 -7.370 -0.046 -5.784 IL 1 1 2 1 4 1 22 85 105 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 22 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 22 81 101 -8.165 -0.018 -6.819 -0.233 -1.048 -1.482 1.206 D 4 2 3 5 3 0 16 80 100 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 21 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 3 1 21 80 100 -8.165 -0.018 -6.819 -2.234 1.734 -3.066 -1.550 D 7 5 3 8 3 0 16 79 99 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 20 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - C - - - ML 9 8 3 11 3 1 20 79 99 -8.165 -0.018 -6.819 -2.234 1.734 -3.066 -1.550 D 10 8 3 11 3 0 15 78 98 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 19 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - C - - - ML 12 11 3 14 3 1 19 78 98 -8.165 -0.018 -6.819 -2.234 1.734 -3.066 -1.550 D 13 11 3 14 3 0 14 77 97 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 19 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - g - - - ML 15 14 3 17 3 1 18 77 97 -8.165 -0.018 -6.819 0.353 -1.707 0.969 -1.124 D 16 14 3 17 3 0 14 76 96 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 18 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 18 17 3 20 3 1 17 76 96 -8.165 -0.018 -6.819 0.688 -1.593 0.643 -1.012 D 19 17 3 20 3 0 13 75 95 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 17 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 17 75 95 -8.165 -0.018 -6.819 -1.865 -1.796 -2.615 1.711 D 22 20 3 23 3 0 12 74 93 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 16 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 16 74 94 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.672 D 25 23 3 26 3 0 11 73 92 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 15 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 15 73 93 -8.165 -0.183 -3.114 1.793 -2.779 -2.370 -2.362 D 28 26 3 29 3 0 11 71 91 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 15 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - a - - - ML 30 29 3 32 3 1 16 72 92 -8.002 -0.020 -6.656 0.868 -1.416 0.311 -0.837 D 31 29 3 32 3 0 10 70 90 -7.267 -2.780 -0.238 IL 32 32 3 32 3 1 15 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 1 15 71 91 -8.002 -0.020 -6.656 -1.662 -2.894 1.741 -2.281 D 34 32 3 35 3 0 10 69 89 -7.267 -2.780 -0.238 IL 35 35 3 35 3 1 14 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 14 70 89 -8.002 -0.020 -6.656 1.735 -2.448 -2.072 -1.998 D 37 35 3 38 3 0 9 68 88 -7.267 -2.780 -0.238 IL 38 38 3 38 3 1 14 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - a - - - ML 39 38 3 41 3 1 13 69 88 -8.390 -0.018 -6.708 0.722 -0.901 -1.066 0.420 D 40 38 3 41 3 0 9 68 87 -6.377 -0.388 -2.160 IL 41 41 3 41 3 1 12 70 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 66 - U - - MR 42 41 3 44 3 1 12 68 87 -8.543 -0.016 -6.861 -0.600 -1.012 -0.345 1.040 D 43 41 3 44 3 0 6 66 86 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 11 69 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 65 - U - - MR 45 44 3 47 3 1 11 67 86 -8.543 -0.016 -6.861 -0.707 -1.050 -0.638 1.177 D 46 44 3 47 3 0 6 65 85 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 10 68 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 64 - u - - MR 48 47 3 50 3 1 11 66 85 -8.543 -0.016 -6.861 -0.872 0.470 -1.666 0.810 D 49 47 3 50 3 0 5 64 84 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 10 67 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 63 - c - - MR 51 50 3 53 3 1 10 65 84 -8.543 -0.016 -6.861 0.238 0.296 -0.395 -0.266 D 52 50 3 53 3 0 4 63 83 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 9 66 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 62 - G - - MR 54 53 3 56 3 1 9 64 83 -8.543 -0.016 -6.861 -0.175 -1.992 1.315 -1.414 D 55 53 3 56 3 0 3 62 82 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 8 65 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 61 - U - - MR 57 56 3 59 5 1 9 63 82 -7.270 -0.034 -7.085 -7.298 -8.189 -0.600 -1.012 -0.345 1.040 D 58 56 3 59 5 0 3 62 81 -5.352 -0.707 -2.978 -4.409 -2.404 IR 59 59 3 59 5 1 6 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 14 60 G C - - MP 60 59 3 64 6 2 8 62 81 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -3.543 -2.635 -3.578 0.771 -3.876 -4.092 0.321 -3.967 -3.627 3.138 -4.027 -0.455 0.022 0.408 -1.551 -2.616 ML 61 59 3 64 6 1 4 61 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 3 64 6 1 3 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 3 64 6 0 0 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 5 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 5 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 15 59 c g - - MP 66 65 6 70 4 2 7 60 79 -7.163 -7.370 -0.046 -5.784 -2.472 -2.612 -2.598 0.567 0.373 -3.380 2.577 -2.730 -2.646 0.567 -0.231 -1.060 1.149 -2.767 -0.210 -1.746 ML 67 65 6 70 4 1 3 60 80 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 1 60 80 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 0 59 79 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 5 62 81 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 4 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 16 - a - - - ML 72 71 6 74 3 1 6 57 77 -8.165 -0.018 -6.819 0.927 -1.053 -1.183 0.234 D 73 71 6 74 3 0 0 56 76 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 4 60 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 17 - A - - - ML 75 74 3 77 3 1 5 56 76 -8.165 -0.018 -6.819 1.793 -2.779 -2.370 -2.362 D 76 74 3 77 3 0 0 55 75 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 3 59 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 18 - U - - - ML 78 77 3 80 3 1 4 55 75 -8.165 -0.018 -6.819 -1.865 -1.796 -2.615 1.711 D 79 77 3 80 3 0 0 54 73 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 3 58 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 19 - c - - - ML 81 80 3 83 3 1 3 54 74 -8.165 -0.018 -6.819 -0.567 0.721 -0.102 -0.424 D 82 80 3 83 3 0 0 53 72 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 2 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 20 - c - - - ML 84 83 3 86 3 1 2 53 72 -8.165 -0.018 -6.819 0.277 0.319 -1.166 0.130 D 85 83 3 86 3 0 0 52 71 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 21 - C - - - ML 87 86 3 89 3 1 1 52 71 -8.165 -0.336 -2.290 -0.306 1.142 -1.708 -0.560 D 88 86 3 89 3 0 0 51 70 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 22 - A - - - ML 90 89 3 92 3 1 3 51 70 -7.851 -0.022 -6.505 1.665 -2.144 -1.799 -1.665 D 91 89 3 92 3 0 0 49 68 -7.796 -3.309 -0.161 IL 92 92 3 92 3 1 1 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 23 - u - - - ML 93 92 3 95 3 1 2 50 69 -7.851 -0.022 -6.505 0.270 -0.764 -0.169 0.396 D 94 92 3 95 3 0 0 48 67 -7.796 -3.309 -0.161 IL 95 95 3 95 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 24 - A - - - ML 96 95 3 98 3 1 1 49 68 -1.840 -0.495 -6.505 1.665 -2.144 -1.799 -1.665 D 97 95 3 98 3 0 0 47 66 -7.796 -0.366 -2.188 IL 98 98 3 98 3 1 1 49 68 -2.111 -0.448 -4.811 0.000 0.000 0.000 0.000 [ MATL 31 ] 26 - c - - - ML 99 98 3 101 3 1 1 47 66 -8.165 -0.018 -6.819 -0.474 0.352 0.339 -0.437 D 100 98 3 101 3 0 0 46 65 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 27 - A - - - ML 102 101 3 104 3 1 1 46 65 -8.165 -0.018 -6.819 1.793 -2.779 -2.370 -2.362 D 103 101 3 104 3 0 0 45 64 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 28 - U - - - ML 105 104 3 107 3 1 1 45 64 -8.165 -0.018 -6.819 -1.865 -1.796 -2.615 1.711 D 106 104 3 107 3 0 0 44 63 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 29 - A - - - ML 108 107 3 110 3 1 1 44 63 -8.165 -0.018 -6.819 1.793 -2.779 -2.370 -2.362 D 109 107 3 110 3 0 0 43 62 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 30 - G - - - ML 111 110 3 113 3 1 1 43 62 -8.543 -0.016 -6.861 -2.004 -3.285 1.804 -2.672 D 112 110 3 113 3 0 0 42 61 -5.620 -0.734 -1.403 IL 113 113 3 113 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 58 - A - - MR 114 113 3 116 3 1 1 42 61 -8.543 -0.016 -6.861 1.793 -2.779 -2.370 -2.362 D 115 113 3 116 3 0 0 40 59 -6.390 -1.568 -0.620 IR 116 116 3 116 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 57 - C - - MR 117 116 3 119 3 1 1 41 60 -8.543 -0.016 -6.861 -2.234 1.734 -3.066 -1.550 D 118 116 3 119 3 0 0 39 58 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 56 - a - - MR 120 119 3 122 3 1 1 40 59 -8.543 -0.016 -6.861 0.688 -1.593 0.643 -1.012 D 121 119 3 122 3 0 0 38 57 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 55 - A - - MR 123 122 3 125 3 1 1 39 58 -8.543 -0.016 -6.861 1.793 -2.779 -2.370 -2.362 D 124 122 3 125 3 0 0 37 56 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 54 - C - - MR 126 125 3 128 3 1 1 38 57 -8.543 -0.016 -6.861 -2.234 1.734 -3.066 -1.550 D 127 125 3 128 3 0 0 36 55 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 53 - A - - MR 129 128 3 131 3 1 1 37 56 -8.543 -0.016 -6.861 1.793 -2.779 -2.370 -2.362 D 130 128 3 131 3 0 0 35 54 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 38 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 52 - a - - MR 132 131 3 134 3 1 1 36 55 -8.543 -0.016 -6.861 0.728 0.251 -1.241 -0.452 D 133 131 3 134 3 0 0 34 53 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 51 - A - - MR 135 134 3 137 5 1 1 35 54 -7.270 -0.034 -7.085 -7.298 -8.189 1.793 -2.779 -2.370 -2.362 D 136 134 3 137 5 0 0 34 53 -5.352 -0.707 -2.978 -4.409 -2.404 IR 137 137 3 137 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 31 50 G U - - MP 138 137 3 142 6 2 2 34 53 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -3.876 -2.576 -4.061 0.959 -4.986 -5.731 -0.547 -4.054 -3.664 1.003 -4.202 3.311 -0.897 -4.867 -2.488 -2.715 ML 139 137 3 142 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 3 142 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 3 142 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 32 49 A U - - MP 144 143 6 148 6 2 2 32 51 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -4.166 -3.107 -4.151 3.528 -4.684 -5.789 -0.359 -4.167 -4.034 0.673 -4.600 -0.527 -0.774 -4.909 -2.298 -2.967 ML 145 143 6 148 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 33 48 A U - - MP 150 149 6 154 6 2 2 30 49 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -4.166 -3.107 -4.151 3.528 -4.684 -5.789 -0.359 -4.167 -4.034 0.673 -4.600 -0.527 -0.774 -4.909 -2.298 -2.967 ML 151 149 6 154 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 34 47 G C - - MP 156 155 6 160 6 2 2 28 47 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -5.137 -3.285 -5.283 -0.070 -5.787 -4.844 -1.053 -5.547 -4.576 3.720 -4.886 -1.002 -1.428 -4.724 -3.113 -4.154 ML 157 155 6 160 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 25 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 35 46 U A - - MP 162 161 6 166 6 2 2 26 45 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -4.682 -4.516 -4.464 -0.779 -3.307 -4.982 1.029 -4.035 -4.465 -0.588 -4.813 -2.399 3.519 -4.812 -0.971 -3.234 ML 163 161 6 166 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 36 45 G C - - MP 168 167 6 172 4 2 2 24 43 -7.163 -7.370 -0.046 -5.784 -5.137 -3.285 -5.283 -0.070 -5.787 -4.844 -1.053 -5.547 -4.576 3.720 -4.886 -1.002 -1.428 -4.724 -3.113 -4.154 ML 169 167 6 172 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 171 167 6 172 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 172 172 5 172 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 173 173 6 173 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 37 - C - - - ML 174 173 6 176 3 1 1 21 40 -8.165 -0.018 -6.819 -2.234 1.734 -3.066 -1.550 D 175 173 6 176 3 0 0 20 39 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 38 - C - - - ML 177 176 3 179 3 1 1 20 39 -8.165 -0.018 -6.819 -2.234 1.734 -3.066 -1.550 D 178 176 3 179 3 0 0 19 38 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 39 - G - - - ML 180 179 3 182 3 1 1 19 37 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.672 D 181 179 3 182 3 0 0 18 37 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 40 - U - - - ML 183 182 3 185 3 1 1 17 36 -8.165 -0.018 -6.819 -1.865 -1.796 -2.615 1.711 D 184 182 3 185 3 0 0 17 36 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 41 - A - - - ML 186 185 3 188 3 1 1 16 35 -8.165 -0.018 -6.819 1.793 -2.779 -2.370 -2.362 D 187 185 3 188 3 0 0 16 34 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 42 - U - - - ML 189 188 3 191 3 1 1 15 33 -8.165 -0.018 -6.819 -1.865 -1.796 -2.615 1.711 D 190 188 3 191 3 0 0 15 33 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 43 - G - - - ML 192 191 3 194 3 1 1 13 31 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.672 D 193 191 3 194 3 0 0 13 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 44 - A - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 1.793 -2.779 -2.370 -2.362 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 58 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME snoU49 ACC RF01300 DESC Small nucleolar RNA U49 LENG 65 MAXL 147 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Feb 28 01:26:06 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 5 EFFN 2.846680 CKSUM 224884205 STATS LOCAL MSV -8.4336 0.71895 STATS LOCAL VITERBI -8.6756 0.71895 STATS LOCAL FORWARD -3.5274 0.71895 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.16682 1.48031 1.49272 1.44258 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 0.00000 * 1 1.57181 2.17422 2.48176 0.51913 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 2 3.12436 0.15309 3.69834 2.61429 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 3 3.12436 0.15309 3.69834 2.61429 3 C - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 4 3.12436 0.15309 3.69834 2.61429 4 C - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 5 1.14057 2.65145 0.68383 2.25254 5 G - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 6 0.89489 2.56913 0.91477 2.17035 6 a - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 7 2.82768 2.75512 3.35294 0.17166 7 U - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 8 2.93269 3.84028 0.11390 3.41390 8 G - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 9 0.12103 3.46907 3.17119 3.19689 9 A - - : 1.38629 1.38629 1.38629 1.38629 0.16119 4.02594 2.03235 1.46634 0.26236 1.09861 0.40547 10 0.76531 2.43273 1.15127 2.03424 10 a - - : 1.38629 1.38629 1.38629 1.38629 0.04108 3.90583 3.90583 1.46634 0.26236 2.23450 0.11322 11 2.68793 3.56410 0.15041 3.13962 11 G - - : 1.38629 1.38629 1.38629 1.38629 0.04108 3.90583 3.90583 1.46634 0.26236 2.23450 0.11322 12 0.15698 3.22727 2.95252 2.92988 12 A - - : 1.38629 1.38629 1.38629 1.38629 0.04108 3.90583 3.90583 1.46634 0.26236 2.23450 0.11322 13 0.86978 2.04634 2.16280 1.08843 13 a - - : 1.38629 1.38629 1.38629 1.38629 0.04108 3.90583 3.90583 1.46634 0.26236 0.24091 1.54136 14 2.11949 2.52235 0.47301 1.73436 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 15 2.13864 0.72596 1.68287 1.54888 15 c - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 16 0.72234 2.16117 2.25326 1.22371 16 a - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 17 0.12103 3.46907 3.17119 3.19689 17 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 18 2.82768 2.75512 3.35294 0.17166 18 U - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 19 1.84225 0.84501 1.44565 1.73502 19 c - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 20 1.19303 1.14146 2.23595 1.30764 20 c - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 21 1.63370 0.55072 2.66508 1.84094 21 C - - - 1.38629 1.38629 1.38629 1.38629 0.27863 4.02594 1.49016 1.46634 0.26236 1.09861 0.40547 22 0.20127 3.00062 2.74846 2.68058 22 A - - - 1.38629 1.38629 1.38629 1.38629 0.04608 3.79340 3.79340 1.46634 0.26236 2.68282 0.07082 23 1.19862 1.93915 1.49697 1.10638 23 u - - - 1.38629 1.38629 1.38629 1.38629 0.04608 3.79340 3.79340 1.46634 0.26236 2.68282 0.07082 24 0.20127 3.00062 2.74846 2.68058 24 A - - - 1.38629 1.38629 1.38629 1.38629 0.41715 1.14395 3.79340 0.13584 2.06345 0.14704 1.98967 25 1.76914 1.11381 1.12051 1.74240 26 c - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 26 0.12103 3.46907 3.17119 3.19689 27 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 27 2.82768 2.75512 3.35294 0.17166 28 U - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 28 0.12103 3.46907 3.17119 3.19689 29 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 29 2.93269 3.84028 0.11390 3.41390 30 G - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 30 2.02765 3.12937 0.25639 2.98049 31 G - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 31 0.25851 3.06069 2.03907 2.97994 32 A - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 32 0.25852 3.06067 2.03907 2.97992 33 A - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 33 2.73417 3.47024 0.13830 3.40795 34 G - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 34 3.23868 2.10778 3.01781 0.23526 35 U - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 35 2.73305 3.46879 0.13852 3.40597 36 G - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 36 3.12436 0.15309 3.69834 2.61429 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 37 3.12436 0.15309 3.69834 2.61429 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 38 2.93269 3.84028 0.11390 3.41390 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 39 2.82768 2.75512 3.35294 0.17166 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 40 0.12103 3.46907 3.17119 3.19689 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 41 2.82768 2.75512 3.35294 0.17166 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 42 2.93269 3.84028 0.11390 3.41390 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 43 0.12103 3.46907 3.17119 3.19689 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 44 3.59620 0.16507 3.30862 2.42850 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 45 0.26669 3.20668 1.94446 2.98512 46 A - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 46 3.60218 0.16464 3.31139 2.42963 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 47 3.20748 2.36072 2.87163 0.21247 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 48 3.21140 2.36130 2.87324 0.21210 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 49 3.19994 2.09904 2.92979 0.24430 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 50 0.12103 3.46907 3.17119 3.19689 51 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 51 0.86266 1.18978 2.30436 1.74956 52 a - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 52 0.12103 3.46907 3.17119 3.19689 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 53 3.12436 0.15309 3.69834 2.61429 54 C - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 54 0.12103 3.46907 3.17119 3.19689 55 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 55 0.89489 2.56913 0.91477 2.17035 56 a - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 56 3.12436 0.15309 3.69834 2.61429 57 C - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 57 0.12103 3.46907 3.17119 3.19689 58 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 58 1.39564 2.20148 0.69300 1.95465 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 59 2.65442 0.38948 2.34078 1.85790 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 60 1.85752 2.14187 1.62646 0.63510 61 U - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 61 1.53305 2.86143 0.44288 2.46801 62 G - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 62 1.22359 1.15788 1.65976 1.60201 63 c - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 63 2.06023 1.03486 2.61788 0.81116 64 u - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 64 1.94141 2.17476 1.84292 0.53698 65 U - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 65 1.85752 2.14187 1.62646 0.63510 66 U - - : 1.38629 1.38629 1.38629 1.38629 0.20634 1.67962 * 2.05116 0.13764 0.00000 * //